2024-12-10 02:37:30,134 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-12-10 02:37:30,550 Running on GPU 2024-12-10 02:37:34,706 Found 6 citations for tools or databases 2024-12-10 02:37:34,706 Query 1/1: WWP2_SMARCC1 (length 1975) 2024-12-10 02:37:35,026 Sleeping for 7s. Reason: PENDING 2024-12-10 02:37:42,295 Sleeping for 9s. Reason: PENDING 2024-12-10 02:37:51,561 Sleeping for 8s. Reason: PENDING 2024-12-10 02:37:59,827 Sleeping for 6s. Reason: PENDING 2024-12-10 02:38:06,094 Sleeping for 7s. Reason: PENDING 2024-12-10 02:38:13,363 Sleeping for 6s. Reason: PENDING 2024-12-10 02:38:19,632 Sleeping for 8s. Reason: PENDING 2024-12-10 02:38:27,899 Sleeping for 10s. Reason: PENDING 2024-12-10 02:38:38,167 Sleeping for 7s. Reason: PENDING 2024-12-10 02:38:45,424 Sleeping for 10s. Reason: PENDING 2024-12-10 02:38:55,700 Sleeping for 9s. Reason: PENDING 2024-12-10 02:39:04,964 Sleeping for 7s. Reason: PENDING 2024-12-10 02:39:12,223 Sleeping for 7s. Reason: PENDING 2024-12-10 02:39:19,483 Sleeping for 5s. Reason: PENDING 2024-12-10 02:39:24,748 Sleeping for 6s. Reason: PENDING 2024-12-10 02:39:31,014 Sleeping for 5s. Reason: PENDING 2024-12-10 02:39:36,283 Sleeping for 6s. Reason: PENDING 2024-12-10 02:39:42,547 Sleeping for 7s. Reason: PENDING 2024-12-10 02:39:49,817 Sleeping for 8s. Reason: PENDING 2024-12-10 02:39:58,087 Sleeping for 10s. Reason: PENDING 2024-12-10 02:40:08,348 Sleeping for 10s. Reason: PENDING 2024-12-10 02:40:18,619 Sleeping for 10s. Reason: PENDING 2024-12-10 02:40:28,888 Sleeping for 9s. Reason: PENDING 2024-12-10 02:40:38,157 Sleeping for 8s. Reason: RUNNING 2024-12-10 02:40:46,416 Sleeping for 9s. Reason: RUNNING 2024-12-10 02:40:55,691 Sleeping for 5s. Reason: RUNNING 2024-12-10 02:41:00,953 Sleeping for 5s. Reason: RUNNING 2024-12-10 02:41:06,211 Sleeping for 10s. Reason: RUNNING 2024-12-10 02:41:16,485 Sleeping for 8s. Reason: RUNNING 2024-12-10 02:41:24,750 Sleeping for 7s. Reason: RUNNING 2024-12-10 02:41:32,016 Sleeping for 7s. Reason: RUNNING 2024-12-10 02:41:39,288 Sleeping for 6s. Reason: RUNNING 2024-12-10 02:41:45,546 Sleeping for 8s. Reason: RUNNING 2024-12-10 02:41:53,806 Sleeping for 6s. Reason: RUNNING 2024-12-10 02:42:00,064 Sleeping for 10s. Reason: RUNNING 2024-12-10 02:42:10,322 Sleeping for 9s. Reason: RUNNING 2024-12-10 02:42:19,588 Sleeping for 7s. Reason: RUNNING 2024-12-10 02:42:26,851 Sleeping for 7s. Reason: RUNNING 2024-12-10 02:42:34,119 Sleeping for 9s. Reason: RUNNING 2024-12-10 02:42:43,386 Sleeping for 7s. Reason: RUNNING 2024-12-10 02:42:50,656 Sleeping for 6s. Reason: RUNNING 2024-12-10 02:42:56,925 Sleeping for 6s. Reason: RUNNING 2024-12-10 02:43:03,184 Sleeping for 9s. Reason: RUNNING 2024-12-10 02:43:14,698 Sleeping for 6s. Reason: PENDING 2024-12-10 02:43:20,959 Sleeping for 7s. Reason: PENDING 2024-12-10 02:43:28,217 Sleeping for 8s. Reason: PENDING 2024-12-10 02:43:36,482 Sleeping for 8s. Reason: PENDING 2024-12-10 02:43:44,744 Sleeping for 8s. Reason: PENDING 2024-12-10 02:43:53,004 Sleeping for 8s. Reason: PENDING 2024-12-10 02:44:01,273 Sleeping for 8s. Reason: PENDING 2024-12-10 02:44:09,533 Sleeping for 9s. Reason: PENDING 2024-12-10 02:44:18,806 Sleeping for 5s. Reason: PENDING 2024-12-10 02:44:24,068 Sleeping for 6s. Reason: PENDING 2024-12-10 02:44:30,325 Sleeping for 7s. Reason: PENDING 2024-12-10 02:44:37,591 Sleeping for 7s. Reason: PENDING 2024-12-10 02:44:44,858 Sleeping for 6s. Reason: PENDING 2024-12-10 02:44:51,124 Sleeping for 8s. Reason: PENDING 2024-12-10 02:44:59,391 Sleeping for 7s. Reason: PENDING 2024-12-10 02:45:06,653 Sleeping for 5s. Reason: PENDING 2024-12-10 02:45:11,912 Sleeping for 10s. Reason: PENDING 2024-12-10 02:45:22,174 Sleeping for 7s. Reason: PENDING 2024-12-10 02:45:29,431 Sleeping for 10s. Reason: PENDING 2024-12-10 02:45:39,694 Sleeping for 10s. Reason: PENDING 2024-12-10 02:45:49,953 Sleeping for 7s. Reason: PENDING 2024-12-10 02:45:57,209 Sleeping for 7s. Reason: PENDING 2024-12-10 02:46:04,462 Sleeping for 6s. Reason: PENDING 2024-12-10 02:46:10,713 Sleeping for 7s. Reason: PENDING 2024-12-10 02:46:17,967 Sleeping for 9s. Reason: PENDING 2024-12-10 02:46:27,234 Sleeping for 9s. Reason: PENDING 2024-12-10 02:46:36,500 Sleeping for 10s. Reason: PENDING 2024-12-10 02:46:46,764 Sleeping for 7s. Reason: PENDING 2024-12-10 02:46:54,027 Sleeping for 10s. Reason: PENDING 2024-12-10 02:47:04,284 Sleeping for 9s. Reason: PENDING 2024-12-10 02:47:13,548 Sleeping for 8s. Reason: PENDING 2024-12-10 02:47:21,805 Sleeping for 8s. Reason: PENDING 2024-12-10 02:47:30,072 Sleeping for 7s. Reason: PENDING 2024-12-10 02:47:37,327 Sleeping for 7s. Reason: PENDING 2024-12-10 02:47:44,586 Sleeping for 10s. Reason: PENDING 2024-12-10 02:47:54,847 Sleeping for 7s. Reason: PENDING 2024-12-10 02:48:02,106 Sleeping for 5s. Reason: PENDING 2024-12-10 02:48:07,362 Sleeping for 6s. Reason: PENDING 2024-12-10 02:48:13,631 Sleeping for 10s. Reason: PENDING 2024-12-10 02:48:23,900 Sleeping for 7s. Reason: PENDING 2024-12-10 02:48:31,168 Sleeping for 7s. Reason: PENDING 2024-12-10 02:48:38,430 Sleeping for 7s. Reason: PENDING 2024-12-10 02:48:48,124 Sleeping for 6s. Reason: PENDING 2024-12-10 02:48:54,386 Sleeping for 8s. Reason: PENDING 2024-12-10 02:49:02,651 Sleeping for 5s. Reason: PENDING 2024-12-10 02:49:07,911 Sleeping for 5s. Reason: PENDING 2024-12-10 02:49:13,173 Sleeping for 8s. Reason: PENDING 2024-12-10 02:49:21,439 Sleeping for 7s. Reason: PENDING 2024-12-10 02:49:28,704 Sleeping for 5s. Reason: PENDING 2024-12-10 02:49:33,971 Sleeping for 8s. Reason: PENDING 2024-12-10 02:49:42,239 Sleeping for 9s. Reason: PENDING 2024-12-10 02:49:51,503 Sleeping for 9s. Reason: PENDING 2024-12-10 02:50:00,772 Sleeping for 6s. Reason: PENDING 2024-12-10 02:50:07,036 Sleeping for 7s. Reason: PENDING 2024-12-10 02:50:14,306 Sleeping for 5s. Reason: PENDING 2024-12-10 02:50:19,562 Sleeping for 10s. Reason: PENDING 2024-12-10 02:50:29,830 Sleeping for 8s. Reason: PENDING 2024-12-10 02:50:38,093 Sleeping for 10s. Reason: PENDING 2024-12-10 02:50:48,357 Sleeping for 8s. Reason: PENDING 2024-12-10 02:50:56,625 Sleeping for 7s. Reason: PENDING 2024-12-10 02:51:03,890 Sleeping for 10s. Reason: PENDING 2024-12-10 02:51:14,160 Sleeping for 9s. Reason: PENDING 2024-12-10 02:51:23,432 Sleeping for 10s. Reason: RUNNING 2024-12-10 02:51:33,695 Sleeping for 5s. Reason: RUNNING 2024-12-10 02:51:38,954 Sleeping for 6s. Reason: RUNNING 2024-12-10 02:51:45,221 Sleeping for 8s. Reason: RUNNING 2024-12-10 02:51:53,492 Sleeping for 7s. Reason: RUNNING 2024-12-10 02:52:00,749 Sleeping for 6s. Reason: RUNNING 2024-12-10 02:52:07,007 Sleeping for 7s. Reason: RUNNING 2024-12-10 02:52:14,275 Sleeping for 9s. Reason: RUNNING 2024-12-10 02:52:23,547 Sleeping for 9s. Reason: RUNNING 2024-12-10 02:52:32,820 Sleeping for 9s. Reason: RUNNING 2024-12-10 02:52:42,088 Sleeping for 6s. Reason: RUNNING 2024-12-10 02:52:48,344 Sleeping for 7s. Reason: RUNNING 2024-12-10 02:52:55,602 Sleeping for 7s. Reason: RUNNING 2024-12-10 02:53:02,857 Sleeping for 5s. Reason: RUNNING 2024-12-10 02:53:08,113 Sleeping for 8s. Reason: RUNNING 2024-12-10 02:53:16,375 Sleeping for 6s. Reason: RUNNING 2024-12-10 02:53:22,640 Sleeping for 9s. Reason: RUNNING 2024-12-10 02:53:31,911 Sleeping for 10s. Reason: RUNNING 2024-12-10 02:53:42,174 Sleeping for 7s. Reason: RUNNING 2024-12-10 02:53:49,435 Sleeping for 9s. Reason: RUNNING 2024-12-10 02:54:06,298 Setting max_seq=508, max_extra_seq=2048 2024-12-10 02:59:29,127 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=52.2 pTM=0.34 ipTM=0.27 2024-12-10 03:02:04,619 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=51.2 pTM=0.335 ipTM=0.24 tol=17.5 2024-12-10 03:04:40,199 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=51.2 pTM=0.326 ipTM=0.245 tol=12.6 2024-12-10 03:07:15,692 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=50.7 pTM=0.322 ipTM=0.249 tol=8.86 2024-12-10 03:09:51,172 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=50.7 pTM=0.315 ipTM=0.251 tol=4.26 2024-12-10 03:12:26,633 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=50.7 pTM=0.311 ipTM=0.251 tol=5.45 2024-12-10 03:15:02,087 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=50.7 pTM=0.31 ipTM=0.254 tol=5.17 2024-12-10 03:17:37,462 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=51 pTM=0.32 ipTM=0.26 tol=4.47 2024-12-10 03:20:12,818 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=51.2 pTM=0.321 ipTM=0.259 tol=3.54 2024-12-10 03:22:48,188 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=50.9 pTM=0.314 ipTM=0.259 tol=2.55 2024-12-10 03:25:23,574 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=50.9 pTM=0.311 ipTM=0.256 tol=6.9 2024-12-10 03:27:58,971 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=51.6 pTM=0.323 ipTM=0.248 tol=7.17 2024-12-10 03:30:34,364 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=51.4 pTM=0.322 ipTM=0.251 tol=4.34 2024-12-10 03:33:09,708 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=51.2 pTM=0.321 ipTM=0.258 tol=3.51 2024-12-10 03:35:45,062 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=51.2 pTM=0.317 ipTM=0.261 tol=2.73 2024-12-10 03:38:20,497 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=50.8 pTM=0.315 ipTM=0.255 tol=4.54 2024-12-10 03:40:56,030 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=51.2 pTM=0.318 ipTM=0.255 tol=3.54 2024-12-10 03:43:31,609 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=50.9 pTM=0.315 ipTM=0.257 tol=2.42 2024-12-10 03:46:07,172 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=50.8 pTM=0.308 ipTM=0.253 tol=4.03 2024-12-10 03:48:42,722 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=51.4 pTM=0.324 ipTM=0.255 tol=4.28 2024-12-10 03:51:18,269 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=51 pTM=0.317 ipTM=0.254 tol=3.15 2024-12-10 03:53:53,842 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=50.7 pTM=0.312 ipTM=0.25 tol=7.27 2024-12-10 03:56:29,423 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=51.3 pTM=0.325 ipTM=0.248 tol=7.61 2024-12-10 03:59:04,968 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=51.4 pTM=0.325 ipTM=0.251 tol=4.18 2024-12-10 04:01:40,503 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=51.1 pTM=0.32 ipTM=0.257 tol=5.38 2024-12-10 04:04:16,000 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=50.9 pTM=0.314 ipTM=0.257 tol=3.39 2024-12-10 04:06:51,542 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=50.8 pTM=0.314 ipTM=0.252 tol=6.57 2024-12-10 04:09:27,038 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=51.7 pTM=0.323 ipTM=0.251 tol=7.91 2024-12-10 04:12:02,512 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=51.4 pTM=0.32 ipTM=0.249 tol=3.59 2024-12-10 04:14:37,995 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=50.8 pTM=0.316 ipTM=0.251 tol=4.55 2024-12-10 04:17:13,488 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=51.1 pTM=0.315 ipTM=0.252 tol=4.07 2024-12-10 04:17:13,490 alphafold2_multimer_v3_model_1_seed_000 took 4983.6s (30 recycles) 2024-12-10 04:19:51,326 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=52.6 pTM=0.351 ipTM=0.282 2024-12-10 04:22:27,045 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=53.6 pTM=0.348 ipTM=0.29 tol=16.1 2024-12-10 04:25:02,778 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=53.3 pTM=0.338 ipTM=0.241 tol=8.8 2024-12-10 04:27:38,531 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=53.3 pTM=0.334 ipTM=0.221 tol=9.13 2024-12-10 04:30:14,229 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=53.7 pTM=0.336 ipTM=0.231 tol=6.94 2024-12-10 04:32:49,823 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=53.8 pTM=0.338 ipTM=0.235 tol=5.63 2024-12-10 04:35:25,442 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=53.9 pTM=0.34 ipTM=0.237 tol=3.42 2024-12-10 04:38:01,079 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=53.9 pTM=0.337 ipTM=0.226 tol=3.05 2024-12-10 04:40:36,723 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=54 pTM=0.335 ipTM=0.211 tol=2.86 2024-12-10 04:43:12,381 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=54 pTM=0.335 ipTM=0.214 tol=2.83 2024-12-10 04:45:48,028 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=54 pTM=0.335 ipTM=0.215 tol=2.16 2024-12-10 04:48:23,680 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=54 pTM=0.335 ipTM=0.215 tol=1.91 2024-12-10 04:50:59,344 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=54.1 pTM=0.333 ipTM=0.21 tol=1.99 2024-12-10 04:53:35,018 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=54 pTM=0.333 ipTM=0.209 tol=1.89 2024-12-10 04:56:10,736 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=54 pTM=0.329 ipTM=0.202 tol=2.25 2024-12-10 04:58:46,442 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=54.1 pTM=0.329 ipTM=0.2 tol=1.76 2024-12-10 05:01:22,103 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=54 pTM=0.33 ipTM=0.197 tol=1.98 2024-12-10 05:03:57,724 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=54 pTM=0.329 ipTM=0.198 tol=2.05 2024-12-10 05:06:33,357 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=54.2 pTM=0.332 ipTM=0.202 tol=2.06 2024-12-10 05:09:08,999 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=54.2 pTM=0.331 ipTM=0.201 tol=2.16 2024-12-10 05:11:44,472 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=54.1 pTM=0.329 ipTM=0.203 tol=2.05 2024-12-10 05:14:19,944 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=54.2 pTM=0.33 ipTM=0.205 tol=2.02 2024-12-10 05:16:55,463 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=54 pTM=0.334 ipTM=0.208 tol=2.41 2024-12-10 05:19:30,929 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=54 pTM=0.334 ipTM=0.202 tol=3.08 2024-12-10 05:22:06,507 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=53.9 pTM=0.332 ipTM=0.198 tol=2.69 2024-12-10 05:24:42,213 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=53.9 pTM=0.332 ipTM=0.202 tol=3.38 2024-12-10 05:27:17,763 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=54.1 pTM=0.334 ipTM=0.214 tol=2.81 2024-12-10 05:29:53,347 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=54.3 pTM=0.334 ipTM=0.211 tol=2.1 2024-12-10 05:32:28,994 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=54 pTM=0.331 ipTM=0.205 tol=2.74 2024-12-10 05:35:04,655 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=53.9 pTM=0.33 ipTM=0.201 tol=2.57 2024-12-10 05:37:40,349 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=54 pTM=0.332 ipTM=0.207 tol=2.36 2024-12-10 05:37:40,351 alphafold2_multimer_v3_model_2_seed_000 took 4824.6s (30 recycles) 2024-12-10 05:40:18,750 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=52.3 pTM=0.34 ipTM=0.246 2024-12-10 05:42:54,803 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=51.1 pTM=0.327 ipTM=0.247 tol=25.8 2024-12-10 05:45:30,865 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=51.5 pTM=0.324 ipTM=0.237 tol=16.2 2024-12-10 05:48:06,829 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=51.6 pTM=0.324 ipTM=0.231 tol=13.4 2024-12-10 05:50:42,703 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=51.2 pTM=0.33 ipTM=0.246 tol=13 2024-12-10 05:53:18,687 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=52.2 pTM=0.326 ipTM=0.201 tol=8.88 2024-12-10 05:55:54,692 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=52.5 pTM=0.324 ipTM=0.202 tol=7.51 2024-12-10 05:58:30,599 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=52.1 pTM=0.325 ipTM=0.232 tol=10.6 2024-12-10 06:01:06,475 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=52.4 pTM=0.326 ipTM=0.226 tol=6.76 2024-12-10 06:03:42,241 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=52.5 pTM=0.324 ipTM=0.256 tol=5.36 2024-12-10 06:06:17,941 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=52.8 pTM=0.325 ipTM=0.266 tol=7.22 2024-12-10 06:08:53,666 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=53 pTM=0.324 ipTM=0.275 tol=5.29 2024-12-10 06:11:29,476 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=53 pTM=0.324 ipTM=0.273 tol=3.8 2024-12-10 06:14:05,313 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=53.3 pTM=0.327 ipTM=0.279 tol=3.25 2024-12-10 06:16:41,150 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=53.2 pTM=0.327 ipTM=0.278 tol=4.79 2024-12-10 06:19:17,020 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=53.4 pTM=0.33 ipTM=0.274 tol=4.4 2024-12-10 06:21:52,874 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=53.3 pTM=0.329 ipTM=0.274 tol=5.11 2024-12-10 06:24:28,698 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=53.5 pTM=0.331 ipTM=0.279 tol=3.62 2024-12-10 06:27:04,514 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=53.7 pTM=0.332 ipTM=0.274 tol=3.68 2024-12-10 06:29:40,426 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=53.8 pTM=0.336 ipTM=0.275 tol=4.32 2024-12-10 06:32:16,304 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=53.9 pTM=0.335 ipTM=0.273 tol=5.35 2024-12-10 06:34:52,115 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=53.8 pTM=0.335 ipTM=0.273 tol=3.54 2024-12-10 06:37:27,894 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=53.9 pTM=0.335 ipTM=0.271 tol=4.47 2024-12-10 06:40:03,712 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=53.9 pTM=0.335 ipTM=0.279 tol=3.24 2024-12-10 06:42:39,493 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=54 pTM=0.337 ipTM=0.276 tol=3.59 2024-12-10 06:45:15,274 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=53.9 pTM=0.336 ipTM=0.276 tol=2.67 2024-12-10 06:47:51,097 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=53.8 pTM=0.335 ipTM=0.273 tol=2.72 2024-12-10 06:50:26,989 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=54 pTM=0.335 ipTM=0.276 tol=2.63 2024-12-10 06:53:02,844 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=53.9 pTM=0.335 ipTM=0.273 tol=1.94 2024-12-10 06:55:38,630 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=53.9 pTM=0.336 ipTM=0.276 tol=2.74 2024-12-10 06:58:14,399 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=54 pTM=0.337 ipTM=0.273 tol=2.55 2024-12-10 06:58:14,401 alphafold2_multimer_v3_model_3_seed_000 took 4831.8s (30 recycles) 2024-12-10 07:00:52,777 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=50.1 pTM=0.362 ipTM=0.421 2024-12-10 07:03:28,682 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=50 pTM=0.365 ipTM=0.388 tol=18.7 2024-12-10 07:06:04,642 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=50.2 pTM=0.373 ipTM=0.402 tol=13.5 2024-12-10 07:08:40,652 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=50.3 pTM=0.363 ipTM=0.399 tol=11.4 2024-12-10 07:11:16,484 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=50.4 pTM=0.363 ipTM=0.4 tol=11.7 2024-12-10 07:13:52,326 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=50.8 pTM=0.367 ipTM=0.414 tol=10.4 2024-12-10 07:16:28,216 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=50.7 pTM=0.362 ipTM=0.414 tol=9.34 2024-12-10 07:19:04,138 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=50.8 pTM=0.365 ipTM=0.409 tol=6.09 2024-12-10 07:21:40,065 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=50.7 pTM=0.364 ipTM=0.422 tol=4.45 2024-12-10 07:24:15,957 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=50.5 pTM=0.359 ipTM=0.412 tol=3.86 2024-12-10 07:26:51,782 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=50.4 pTM=0.361 ipTM=0.414 tol=8.77 2024-12-10 07:29:27,691 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=50.8 pTM=0.362 ipTM=0.415 tol=9.12 2024-12-10 07:32:03,639 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=50.8 pTM=0.363 ipTM=0.426 tol=4.37 2024-12-10 07:34:39,591 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=50.5 pTM=0.357 ipTM=0.416 tol=4.21 2024-12-10 07:37:15,588 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=50.4 pTM=0.356 ipTM=0.415 tol=5.8 2024-12-10 07:39:51,616 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=50.2 pTM=0.356 ipTM=0.411 tol=4.68 2024-12-10 07:42:27,601 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=50.5 pTM=0.361 ipTM=0.416 tol=5.8 2024-12-10 07:45:03,562 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=50.4 pTM=0.357 ipTM=0.413 tol=9.91 2024-12-10 07:47:39,550 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=50.3 pTM=0.357 ipTM=0.417 tol=5.97 2024-12-10 07:50:15,473 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=50.6 pTM=0.357 ipTM=0.417 tol=8.78 2024-12-10 07:52:51,403 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=50.5 pTM=0.359 ipTM=0.421 tol=7.52 2024-12-10 07:55:27,314 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=50.4 pTM=0.356 ipTM=0.413 tol=5.45 2024-12-10 07:58:03,202 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=50.4 pTM=0.359 ipTM=0.413 tol=5.22 2024-12-10 08:00:39,028 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=50.6 pTM=0.356 ipTM=0.406 tol=5.9 2024-12-10 08:03:14,844 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=50.3 pTM=0.353 ipTM=0.403 tol=3.46 2024-12-10 08:05:50,729 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=49.9 pTM=0.344 ipTM=0.398 tol=3.13 2024-12-10 08:08:26,707 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=50.1 pTM=0.346 ipTM=0.397 tol=2.97 2024-12-10 08:11:02,670 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=50.2 pTM=0.354 ipTM=0.406 tol=14 2024-12-10 08:13:38,578 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=49.7 pTM=0.35 ipTM=0.404 tol=6.71 2024-12-10 08:16:14,494 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=49.6 pTM=0.35 ipTM=0.409 tol=7.16 2024-12-10 08:18:50,338 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=50.1 pTM=0.361 ipTM=0.42 tol=4.23 2024-12-10 08:18:50,340 alphafold2_multimer_v3_model_4_seed_000 took 4833.7s (30 recycles) 2024-12-10 08:21:28,731 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=50.4 pTM=0.338 ipTM=0.225 2024-12-10 08:24:04,892 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=50.5 pTM=0.34 ipTM=0.249 tol=21.9 2024-12-10 08:26:40,874 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=51 pTM=0.351 ipTM=0.311 tol=10.8 2024-12-10 08:29:16,776 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=51.7 pTM=0.369 ipTM=0.447 tol=8.4 2024-12-10 08:31:52,600 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=51.9 pTM=0.368 ipTM=0.432 tol=6.82 2024-12-10 08:34:28,415 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=52 pTM=0.366 ipTM=0.438 tol=5.82 2024-12-10 08:37:04,090 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=52.2 pTM=0.364 ipTM=0.441 tol=4.66 2024-12-10 08:39:39,793 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=52.1 pTM=0.361 ipTM=0.44 tol=5.06 2024-12-10 08:42:15,578 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=52.1 pTM=0.362 ipTM=0.443 tol=3.83 2024-12-10 08:44:51,382 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=52.1 pTM=0.358 ipTM=0.439 tol=3.66 2024-12-10 08:47:27,035 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=52.5 pTM=0.365 ipTM=0.446 tol=3.94 2024-12-10 08:50:02,703 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=52.3 pTM=0.361 ipTM=0.433 tol=3.88 2024-12-10 08:52:38,385 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=52.3 pTM=0.363 ipTM=0.432 tol=4.94 2024-12-10 08:55:14,090 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=52.2 pTM=0.363 ipTM=0.438 tol=4.2 2024-12-10 08:57:49,815 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=52.3 pTM=0.362 ipTM=0.438 tol=4 2024-12-10 09:00:25,572 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=52.2 pTM=0.358 ipTM=0.427 tol=3.71 2024-12-10 09:03:01,265 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=52.2 pTM=0.36 ipTM=0.429 tol=5.97 2024-12-10 09:05:36,989 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=52 pTM=0.358 ipTM=0.426 tol=3.05 2024-12-10 09:08:12,744 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=52.4 pTM=0.36 ipTM=0.427 tol=3.09 2024-12-10 09:10:48,439 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=52.3 pTM=0.361 ipTM=0.427 tol=4.7 2024-12-10 09:13:24,109 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=52.2 pTM=0.36 ipTM=0.43 tol=3.52 2024-12-10 09:15:59,767 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=52.1 pTM=0.358 ipTM=0.422 tol=4.55 2024-12-10 09:18:35,517 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=52.2 pTM=0.36 ipTM=0.428 tol=4.77 2024-12-10 09:21:11,276 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=52.3 pTM=0.358 ipTM=0.427 tol=4.21 2024-12-10 09:23:46,966 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=52 pTM=0.354 ipTM=0.425 tol=5.09 2024-12-10 09:26:22,755 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=52 pTM=0.351 ipTM=0.418 tol=5.27 2024-12-10 09:28:58,520 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=51.9 pTM=0.348 ipTM=0.419 tol=3.18 2024-12-10 09:31:34,242 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=52.2 pTM=0.352 ipTM=0.424 tol=3.37 2024-12-10 09:34:09,963 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=52.1 pTM=0.349 ipTM=0.412 tol=3.47 2024-12-10 09:36:45,751 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=51.9 pTM=0.349 ipTM=0.42 tol=3.3 2024-12-10 09:39:21,572 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=52 pTM=0.349 ipTM=0.419 tol=3.15 2024-12-10 09:39:21,574 alphafold2_multimer_v3_model_5_seed_000 took 4829.0s (30 recycles) 2024-12-10 09:39:23,816 reranking models by 'multimer' metric 2024-12-10 09:39:25,664 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-12-10 09:44:18,975 Relaxation took 295.2s 2024-12-10 09:44:18,975 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=50.1 pTM=0.361 ipTM=0.42 2024-12-10 09:50:58,530 Relaxation took 399.6s 2024-12-10 09:50:58,530 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=52 pTM=0.349 ipTM=0.419 2024-12-10 09:56:15,106 Relaxation took 316.6s 2024-12-10 09:56:15,106 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=54 pTM=0.337 ipTM=0.273 2024-12-10 10:02:07,614 Relaxation took 352.5s 2024-12-10 10:02:07,614 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=51.1 pTM=0.315 ipTM=0.252 2024-12-10 10:08:26,306 Relaxation took 378.7s 2024-12-10 10:08:26,306 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=54 pTM=0.332 ipTM=0.207 2024-12-10 10:08:31,131 Done