2024-12-10 03:27:04,113 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-12-10 03:27:04,470 Running on GPU 2024-12-10 03:27:08,337 Found 6 citations for tools or databases 2024-12-10 03:27:08,337 Query 1/1: ZNRF2_NCKAP5 (length 2151) 2024-12-10 03:27:08,640 Sleeping for 7s. Reason: PENDING 2024-12-10 03:27:15,900 Sleeping for 8s. Reason: RUNNING 2024-12-10 03:27:24,160 Sleeping for 9s. Reason: RUNNING 2024-12-10 03:27:33,427 Sleeping for 7s. Reason: RUNNING 2024-12-10 03:27:40,690 Sleeping for 7s. Reason: RUNNING 2024-12-10 03:27:47,952 Sleeping for 6s. Reason: RUNNING 2024-12-10 03:27:54,208 Sleeping for 7s. Reason: RUNNING 2024-12-10 03:28:01,468 Sleeping for 7s. Reason: RUNNING 2024-12-10 03:28:08,730 Sleeping for 5s. Reason: RUNNING 2024-12-10 03:28:13,983 Sleeping for 5s. Reason: RUNNING 2024-12-10 03:28:19,247 Sleeping for 7s. Reason: RUNNING 2024-12-10 03:28:26,510 Sleeping for 7s. Reason: RUNNING 2024-12-10 03:28:33,771 Sleeping for 7s. Reason: RUNNING 2024-12-10 03:28:41,032 Sleeping for 5s. Reason: RUNNING 2024-12-10 03:28:46,292 Sleeping for 7s. Reason: RUNNING 2024-12-10 03:28:53,567 Sleeping for 6s. Reason: RUNNING 2024-12-10 03:28:59,826 Sleeping for 6s. Reason: RUNNING 2024-12-10 03:29:06,089 Sleeping for 6s. Reason: RUNNING 2024-12-10 03:29:12,342 Sleeping for 6s. Reason: RUNNING 2024-12-10 03:29:18,603 Sleeping for 8s. Reason: RUNNING 2024-12-10 03:29:26,859 Sleeping for 9s. Reason: RUNNING 2024-12-10 03:29:37,469 Sleeping for 6s. Reason: PENDING 2024-12-10 03:29:43,730 Sleeping for 6s. Reason: RUNNING 2024-12-10 03:29:49,988 Sleeping for 5s. Reason: RUNNING 2024-12-10 03:29:55,249 Sleeping for 9s. Reason: RUNNING 2024-12-10 03:30:04,513 Sleeping for 6s. Reason: RUNNING 2024-12-10 03:30:10,775 Sleeping for 5s. Reason: RUNNING 2024-12-10 03:30:16,034 Sleeping for 9s. Reason: RUNNING 2024-12-10 03:30:25,297 Sleeping for 5s. Reason: RUNNING 2024-12-10 03:30:30,559 Sleeping for 9s. Reason: RUNNING 2024-12-10 03:30:39,820 Sleeping for 9s. Reason: RUNNING 2024-12-10 03:30:49,080 Sleeping for 5s. Reason: RUNNING 2024-12-10 03:30:54,341 Sleeping for 8s. Reason: RUNNING 2024-12-10 03:31:02,605 Sleeping for 8s. Reason: RUNNING 2024-12-10 03:31:14,379 Setting max_seq=508, max_extra_seq=2048 2024-12-10 03:37:33,870 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=21.8 pTM=0.233 ipTM=0.225 2024-12-10 03:40:03,733 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=21.1 pTM=0.223 ipTM=0.22 tol=25.7 2024-12-10 03:42:33,751 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=21.3 pTM=0.224 ipTM=0.221 tol=20.2 2024-12-10 03:45:03,650 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=21.1 pTM=0.225 ipTM=0.227 tol=16.2 2024-12-10 03:47:33,565 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=21.3 pTM=0.224 ipTM=0.228 tol=25 2024-12-10 03:50:03,535 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=21.1 pTM=0.225 ipTM=0.237 tol=27 2024-12-10 03:52:33,662 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=21.3 pTM=0.224 ipTM=0.233 tol=22.5 2024-12-10 03:55:03,869 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=21.2 pTM=0.233 ipTM=0.237 tol=33.3 2024-12-10 03:57:33,980 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=20.9 pTM=0.234 ipTM=0.228 tol=24.1 2024-12-10 04:00:04,062 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=21.1 pTM=0.232 ipTM=0.228 tol=19.1 2024-12-10 04:02:34,243 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=21.4 pTM=0.235 ipTM=0.23 tol=17.9 2024-12-10 04:05:04,328 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=21 pTM=0.229 ipTM=0.23 tol=15.4 2024-12-10 04:07:34,500 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=21.3 pTM=0.228 ipTM=0.232 tol=13.9 2024-12-10 04:10:04,764 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=21.3 pTM=0.225 ipTM=0.234 tol=17.3 2024-12-10 04:12:35,099 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=21.4 pTM=0.225 ipTM=0.233 tol=22.9 2024-12-10 04:15:05,797 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=21.2 pTM=0.223 ipTM=0.233 tol=19.1 2024-12-10 04:17:36,199 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=21.5 pTM=0.225 ipTM=0.232 tol=15.1 2024-12-10 04:20:06,497 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=21.7 pTM=0.224 ipTM=0.23 tol=15.1 2024-12-10 04:22:36,783 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=21.6 pTM=0.225 ipTM=0.232 tol=17.8 2024-12-10 04:25:07,044 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=21.6 pTM=0.224 ipTM=0.234 tol=12.7 2024-12-10 04:27:37,441 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=21.7 pTM=0.224 ipTM=0.235 tol=13.2 2024-12-10 04:30:07,697 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=21.6 pTM=0.224 ipTM=0.236 tol=10.2 2024-12-10 04:32:37,981 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=21.6 pTM=0.225 ipTM=0.235 tol=10.4 2024-12-10 04:35:08,429 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=21.7 pTM=0.224 ipTM=0.233 tol=11.9 2024-12-10 04:37:38,735 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=21.6 pTM=0.224 ipTM=0.234 tol=11.6 2024-12-10 04:40:08,893 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=21.4 pTM=0.225 ipTM=0.234 tol=12.3 2024-12-10 04:42:39,004 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=21.4 pTM=0.224 ipTM=0.233 tol=16 2024-12-10 04:45:08,973 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=21.5 pTM=0.226 ipTM=0.235 tol=13.5 2024-12-10 04:47:39,110 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=21.4 pTM=0.221 ipTM=0.233 tol=15.8 2024-12-10 04:50:10,426 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=21.5 pTM=0.222 ipTM=0.233 tol=14.4 2024-12-10 04:52:40,987 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=21.4 pTM=0.222 ipTM=0.233 tol=14.6 2024-12-10 04:52:40,989 alphafold2_multimer_v3_model_1_seed_000 took 4879.6s (30 recycles) 2024-12-10 04:55:14,175 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=21.2 pTM=0.221 ipTM=0.235 2024-12-10 04:57:44,523 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=22 pTM=0.23 ipTM=0.269 tol=25.9 2024-12-10 05:00:15,019 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=22.5 pTM=0.233 ipTM=0.288 tol=19.5 2024-12-10 05:02:45,487 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=22.4 pTM=0.233 ipTM=0.287 tol=16.1 2024-12-10 05:05:15,756 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=22.7 pTM=0.233 ipTM=0.286 tol=15.1 2024-12-10 05:07:45,888 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=22.8 pTM=0.236 ipTM=0.292 tol=14.6 2024-12-10 05:10:15,943 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=22.8 pTM=0.235 ipTM=0.29 tol=12.2 2024-12-10 05:12:46,228 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=22.8 pTM=0.235 ipTM=0.283 tol=13.2 2024-12-10 05:15:16,529 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=22.6 pTM=0.236 ipTM=0.28 tol=12.1 2024-12-10 05:17:46,712 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=22.7 pTM=0.235 ipTM=0.28 tol=12.9 2024-12-10 05:20:16,976 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=22.9 pTM=0.236 ipTM=0.282 tol=11.8 2024-12-10 05:22:47,100 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=22.9 pTM=0.235 ipTM=0.28 tol=10.1 2024-12-10 05:25:17,142 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=22.9 pTM=0.236 ipTM=0.284 tol=12.8 2024-12-10 05:27:47,248 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=22.7 pTM=0.235 ipTM=0.28 tol=12.1 2024-12-10 05:30:17,469 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=22.5 pTM=0.235 ipTM=0.275 tol=13.6 2024-12-10 05:32:47,732 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=22.7 pTM=0.235 ipTM=0.285 tol=12.4 2024-12-10 05:35:17,889 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=22.9 pTM=0.237 ipTM=0.286 tol=12.6 2024-12-10 05:37:48,017 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=22.9 pTM=0.237 ipTM=0.285 tol=10.2 2024-12-10 05:40:18,174 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=22.9 pTM=0.237 ipTM=0.284 tol=10.4 2024-12-10 05:42:48,272 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=23 pTM=0.236 ipTM=0.278 tol=16.5 2024-12-10 05:45:18,504 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=23.2 pTM=0.234 ipTM=0.275 tol=16.7 2024-12-10 05:47:48,824 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=23 pTM=0.235 ipTM=0.272 tol=12.4 2024-12-10 05:50:19,326 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=23.2 pTM=0.234 ipTM=0.271 tol=11.3 2024-12-10 05:52:50,055 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=23.2 pTM=0.234 ipTM=0.268 tol=11.5 2024-12-10 05:55:20,959 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=23 pTM=0.235 ipTM=0.27 tol=12.1 2024-12-10 05:57:51,560 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=23.1 pTM=0.233 ipTM=0.265 tol=10.4 2024-12-10 06:00:22,056 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=23.3 pTM=0.233 ipTM=0.267 tol=9.77 2024-12-10 06:02:52,495 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=23.3 pTM=0.234 ipTM=0.27 tol=17.1 2024-12-10 06:05:22,977 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=23.3 pTM=0.235 ipTM=0.279 tol=14.1 2024-12-10 06:07:53,485 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=23.3 pTM=0.234 ipTM=0.275 tol=18.2 2024-12-10 06:10:23,999 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=23 pTM=0.234 ipTM=0.272 tol=15.1 2024-12-10 06:10:24,001 alphafold2_multimer_v3_model_2_seed_000 took 4659.6s (30 recycles) 2024-12-10 06:12:57,641 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=21.7 pTM=0.226 ipTM=0.271 2024-12-10 06:15:28,418 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=22.3 pTM=0.252 ipTM=0.285 tol=30.5 2024-12-10 06:17:59,506 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=23 pTM=0.26 ipTM=0.276 tol=29.4 2024-12-10 06:20:30,759 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=22.9 pTM=0.257 ipTM=0.296 tol=28.4 2024-12-10 06:23:02,248 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=22.5 pTM=0.249 ipTM=0.262 tol=22.7 2024-12-10 06:25:33,928 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=22.7 pTM=0.253 ipTM=0.274 tol=20 2024-12-10 06:28:05,560 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=23.1 pTM=0.254 ipTM=0.282 tol=23 2024-12-10 06:30:37,095 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=23.5 pTM=0.263 ipTM=0.33 tol=17.5 2024-12-10 06:33:08,627 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=22.8 pTM=0.254 ipTM=0.267 tol=14.1 2024-12-10 06:35:40,253 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=23.3 pTM=0.263 ipTM=0.315 tol=12.9 2024-12-10 06:38:11,751 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=22.8 pTM=0.255 ipTM=0.263 tol=20.8 2024-12-10 06:40:43,127 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=22.8 pTM=0.254 ipTM=0.269 tol=23.7 2024-12-10 06:43:14,503 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=22.8 pTM=0.253 ipTM=0.27 tol=15.3 2024-12-10 06:45:45,723 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=22.7 pTM=0.254 ipTM=0.268 tol=16 2024-12-10 06:48:17,094 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=22.6 pTM=0.253 ipTM=0.256 tol=12.9 2024-12-10 06:50:48,530 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=22.8 pTM=0.257 ipTM=0.276 tol=19.1 2024-12-10 06:53:20,033 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=22.2 pTM=0.249 ipTM=0.25 tol=19.1 2024-12-10 06:55:51,466 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=22.2 pTM=0.252 ipTM=0.25 tol=16.9 2024-12-10 06:58:22,843 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=22.5 pTM=0.255 ipTM=0.269 tol=21.8 2024-12-10 07:00:54,238 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=22.6 pTM=0.254 ipTM=0.257 tol=19.6 2024-12-10 07:03:25,728 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=22.8 pTM=0.257 ipTM=0.277 tol=16.2 2024-12-10 07:05:57,250 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=22.8 pTM=0.254 ipTM=0.253 tol=13.3 2024-12-10 07:08:28,782 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=22.8 pTM=0.256 ipTM=0.253 tol=11.8 2024-12-10 07:11:00,200 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=23 pTM=0.257 ipTM=0.263 tol=28.9 2024-12-10 07:13:31,641 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=22.8 pTM=0.255 ipTM=0.271 tol=21.7 2024-12-10 07:16:03,000 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=22.5 pTM=0.255 ipTM=0.264 tol=24.3 2024-12-10 07:18:34,435 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=22.7 pTM=0.256 ipTM=0.259 tol=22.6 2024-12-10 07:21:05,789 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=22.6 pTM=0.253 ipTM=0.266 tol=27.3 2024-12-10 07:23:37,066 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=22.7 pTM=0.254 ipTM=0.277 tol=28.1 2024-12-10 07:26:08,515 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=22.8 pTM=0.257 ipTM=0.268 tol=24.7 2024-12-10 07:28:39,951 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=23.2 pTM=0.259 ipTM=0.293 tol=18 2024-12-10 07:28:39,953 alphafold2_multimer_v3_model_3_seed_000 took 4692.5s (30 recycles) 2024-12-10 07:31:14,276 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=21.7 pTM=0.212 ipTM=0.237 2024-12-10 07:33:46,280 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=21.4 pTM=0.215 ipTM=0.268 tol=28.2 2024-12-10 07:36:18,309 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=21.4 pTM=0.215 ipTM=0.261 tol=24 2024-12-10 07:38:50,409 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=21.2 pTM=0.217 ipTM=0.269 tol=25 2024-12-10 07:41:22,684 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=21.6 pTM=0.215 ipTM=0.264 tol=21.7 2024-12-10 07:43:54,926 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=21.5 pTM=0.216 ipTM=0.26 tol=22.5 2024-12-10 07:46:27,373 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=21.5 pTM=0.214 ipTM=0.252 tol=21.1 2024-12-10 07:48:59,715 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=21.3 pTM=0.215 ipTM=0.253 tol=20.2 2024-12-10 07:51:31,522 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=21.1 pTM=0.213 ipTM=0.247 tol=16.9 2024-12-10 07:54:03,436 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=21.4 pTM=0.23 ipTM=0.249 tol=20.1 2024-12-10 07:56:35,144 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=21.5 pTM=0.247 ipTM=0.261 tol=22.1 2024-12-10 07:59:06,846 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=21 pTM=0.236 ipTM=0.251 tol=25.9 2024-12-10 08:01:38,523 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=21 pTM=0.229 ipTM=0.246 tol=25.1 2024-12-10 08:04:10,316 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=20.8 pTM=0.23 ipTM=0.245 tol=24.4 2024-12-10 08:06:42,220 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=20.9 pTM=0.227 ipTM=0.239 tol=22.7 2024-12-10 08:09:14,066 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=21.1 pTM=0.226 ipTM=0.244 tol=18.3 2024-12-10 08:11:46,016 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=21.2 pTM=0.223 ipTM=0.246 tol=16.7 2024-12-10 08:14:18,171 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=21.1 pTM=0.228 ipTM=0.252 tol=19.1 2024-12-10 08:16:50,069 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=20.9 pTM=0.223 ipTM=0.243 tol=19 2024-12-10 08:19:21,938 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=21.1 pTM=0.223 ipTM=0.249 tol=21.4 2024-12-10 08:21:53,774 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=21 pTM=0.224 ipTM=0.245 tol=17.8 2024-12-10 08:24:25,545 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=21 pTM=0.228 ipTM=0.247 tol=16.1 2024-12-10 08:26:57,330 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=21.2 pTM=0.225 ipTM=0.243 tol=15.3 2024-12-10 08:29:29,225 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=21.1 pTM=0.226 ipTM=0.25 tol=18.5 2024-12-10 08:32:01,302 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=21.2 pTM=0.224 ipTM=0.244 tol=17.5 2024-12-10 08:34:33,220 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=21.2 pTM=0.225 ipTM=0.248 tol=18 2024-12-10 08:37:05,122 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=21.2 pTM=0.222 ipTM=0.247 tol=15.4 2024-12-10 08:39:37,193 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=21.1 pTM=0.221 ipTM=0.243 tol=16.5 2024-12-10 08:42:09,077 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=21.1 pTM=0.222 ipTM=0.244 tol=14.9 2024-12-10 08:44:40,966 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=21.2 pTM=0.221 ipTM=0.256 tol=15.6 2024-12-10 08:47:12,973 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=21 pTM=0.22 ipTM=0.247 tol=16.8 2024-12-10 08:47:12,975 alphafold2_multimer_v3_model_4_seed_000 took 4709.6s (30 recycles) 2024-12-10 08:49:47,947 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=21.4 pTM=0.215 ipTM=0.241 2024-12-10 08:52:20,390 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=21.7 pTM=0.216 ipTM=0.239 tol=25.3 2024-12-10 08:54:52,402 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=22.2 pTM=0.217 ipTM=0.236 tol=23.7 2024-12-10 08:57:24,309 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=21.9 pTM=0.226 ipTM=0.233 tol=29.5 2024-12-10 08:59:56,366 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=21.7 pTM=0.224 ipTM=0.237 tol=26.2 2024-12-10 09:02:28,331 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=22.1 pTM=0.225 ipTM=0.243 tol=27.4 2024-12-10 09:05:00,469 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=22.9 pTM=0.218 ipTM=0.245 tol=22.7 2024-12-10 09:07:32,647 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=23 pTM=0.219 ipTM=0.239 tol=26.5 2024-12-10 09:10:04,706 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=22.4 pTM=0.219 ipTM=0.236 tol=25.8 2024-12-10 09:12:36,908 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=22.8 pTM=0.22 ipTM=0.244 tol=27.4 2024-12-10 09:15:09,235 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=22.7 pTM=0.219 ipTM=0.245 tol=17.6 2024-12-10 09:17:41,431 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=22.3 pTM=0.217 ipTM=0.243 tol=24.5 2024-12-10 09:20:13,664 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=22.5 pTM=0.219 ipTM=0.25 tol=20.3 2024-12-10 09:22:45,954 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=22 pTM=0.219 ipTM=0.24 tol=26.9 2024-12-10 09:25:18,232 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=22 pTM=0.229 ipTM=0.239 tol=25.9 2024-12-10 09:27:50,473 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=22 pTM=0.238 ipTM=0.238 tol=30.9 2024-12-10 09:30:22,841 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=21.7 pTM=0.229 ipTM=0.233 tol=20.2 2024-12-10 09:32:55,184 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=22.3 pTM=0.234 ipTM=0.235 tol=17.9 2024-12-10 09:35:27,486 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=22.5 pTM=0.242 ipTM=0.242 tol=16.2 2024-12-10 09:37:59,726 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=22 pTM=0.237 ipTM=0.229 tol=29.2 2024-12-10 09:40:31,799 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=21.9 pTM=0.23 ipTM=0.228 tol=19.7 2024-12-10 09:43:03,956 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=22.3 pTM=0.235 ipTM=0.237 tol=16.2 2024-12-10 09:45:36,278 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=22.5 pTM=0.24 ipTM=0.234 tol=25.6 2024-12-10 09:48:08,635 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=22.4 pTM=0.241 ipTM=0.237 tol=17.9 2024-12-10 09:50:40,982 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=22.3 pTM=0.24 ipTM=0.236 tol=17.3 2024-12-10 09:53:13,212 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=22.2 pTM=0.242 ipTM=0.239 tol=25.8 2024-12-10 09:55:45,197 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=22 pTM=0.24 ipTM=0.236 tol=23.7 2024-12-10 09:58:17,259 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=22 pTM=0.234 ipTM=0.233 tol=23.9 2024-12-10 10:00:49,294 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=21.9 pTM=0.234 ipTM=0.231 tol=16.4 2024-12-10 10:03:21,296 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=22 pTM=0.231 ipTM=0.231 tol=17.1 2024-12-10 10:05:53,320 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=21.8 pTM=0.233 ipTM=0.233 tol=29.6 2024-12-10 10:05:53,323 alphafold2_multimer_v3_model_5_seed_000 took 4716.9s (30 recycles) 2024-12-10 10:05:56,717 reranking models by 'multimer' metric 2024-12-10 10:05:58,915 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-12-10 10:14:22,909 Relaxation took 506.2s 2024-12-10 10:14:22,909 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=23.2 pTM=0.259 ipTM=0.293 2024-12-10 10:21:33,241 Relaxation took 430.3s 2024-12-10 10:21:33,241 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=23 pTM=0.234 ipTM=0.272 2024-12-10 10:40:54,268 Relaxation took 1161.0s 2024-12-10 10:40:54,268 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=21 pTM=0.22 ipTM=0.247 2024-12-10 10:52:43,886 Relaxation took 709.6s 2024-12-10 10:52:43,886 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=21.8 pTM=0.233 ipTM=0.233 2024-12-10 11:02:14,482 Relaxation took 570.6s 2024-12-10 11:02:14,482 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=21.4 pTM=0.222 ipTM=0.233 2024-12-10 11:02:21,035 Done