2024-12-10 03:31:36,305 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-12-10 03:31:36,618 Running on GPU 2024-12-10 03:31:40,353 Found 6 citations for tools or databases 2024-12-10 03:31:40,353 Query 1/1: ZNRF2_TLN1 (length 2783) 2024-12-10 03:31:40,658 Sleeping for 6s. Reason: PENDING 2024-12-10 03:31:46,920 Sleeping for 8s. Reason: PENDING 2024-12-10 03:31:55,188 Sleeping for 8s. Reason: RUNNING 2024-12-10 03:32:03,457 Sleeping for 5s. Reason: RUNNING 2024-12-10 03:32:08,726 Sleeping for 9s. Reason: RUNNING 2024-12-10 03:32:17,994 Sleeping for 6s. Reason: RUNNING 2024-12-10 03:32:24,254 Sleeping for 7s. Reason: RUNNING 2024-12-10 03:32:31,518 Sleeping for 7s. Reason: RUNNING 2024-12-10 03:32:38,784 Sleeping for 5s. Reason: RUNNING 2024-12-10 03:32:44,050 Sleeping for 9s. Reason: RUNNING 2024-12-10 03:32:53,321 Sleeping for 10s. Reason: RUNNING 2024-12-10 03:33:03,588 Sleeping for 8s. Reason: RUNNING 2024-12-10 03:33:11,859 Sleeping for 6s. Reason: RUNNING 2024-12-10 03:33:18,125 Sleeping for 5s. Reason: RUNNING 2024-12-10 03:33:23,382 Sleeping for 7s. Reason: RUNNING 2024-12-10 03:33:30,647 Sleeping for 7s. Reason: RUNNING 2024-12-10 03:33:37,913 Sleeping for 8s. Reason: RUNNING 2024-12-10 03:33:46,170 Sleeping for 6s. Reason: RUNNING 2024-12-10 03:33:52,434 Sleeping for 6s. Reason: RUNNING 2024-12-10 03:33:58,699 Sleeping for 10s. Reason: RUNNING 2024-12-10 03:34:08,968 Sleeping for 10s. Reason: RUNNING 2024-12-10 03:34:19,236 Sleeping for 5s. Reason: RUNNING 2024-12-10 03:34:24,491 Sleeping for 5s. Reason: RUNNING 2024-12-10 03:34:29,752 Sleeping for 8s. Reason: RUNNING 2024-12-10 03:34:38,012 Sleeping for 6s. Reason: RUNNING 2024-12-10 03:34:44,277 Sleeping for 9s. Reason: RUNNING 2024-12-10 03:34:55,254 Sleeping for 5s. Reason: PENDING 2024-12-10 03:35:00,516 Sleeping for 5s. Reason: RUNNING 2024-12-10 03:35:05,776 Sleeping for 5s. Reason: RUNNING 2024-12-10 03:35:11,036 Sleeping for 7s. Reason: RUNNING 2024-12-10 03:35:18,289 Sleeping for 6s. Reason: RUNNING 2024-12-10 03:35:24,556 Sleeping for 10s. Reason: RUNNING 2024-12-10 03:35:34,812 Sleeping for 6s. Reason: RUNNING 2024-12-10 03:35:41,085 Sleeping for 10s. Reason: RUNNING 2024-12-10 03:35:51,347 Sleeping for 8s. Reason: RUNNING 2024-12-10 03:35:59,608 Sleeping for 7s. Reason: RUNNING 2024-12-10 03:36:06,870 Sleeping for 5s. Reason: RUNNING 2024-12-10 03:36:12,128 Sleeping for 5s. Reason: RUNNING 2024-12-10 03:36:17,385 Sleeping for 7s. Reason: RUNNING 2024-12-10 03:36:24,636 Sleeping for 9s. Reason: RUNNING 2024-12-10 03:36:33,892 Sleeping for 5s. Reason: RUNNING 2024-12-10 03:36:39,147 Sleeping for 9s. Reason: RUNNING 2024-12-10 03:36:48,405 Sleeping for 7s. Reason: RUNNING 2024-12-10 03:36:55,674 Sleeping for 5s. Reason: RUNNING 2024-12-10 03:37:00,926 Sleeping for 8s. Reason: RUNNING 2024-12-10 03:37:09,190 Sleeping for 8s. Reason: RUNNING 2024-12-10 03:37:17,443 Sleeping for 8s. Reason: RUNNING 2024-12-10 03:37:25,703 Sleeping for 8s. Reason: RUNNING 2024-12-10 03:37:33,958 Sleeping for 6s. Reason: RUNNING 2024-12-10 03:37:40,209 Sleeping for 6s. Reason: RUNNING 2024-12-10 03:37:46,458 Sleeping for 6s. Reason: RUNNING 2024-12-10 03:37:52,718 Sleeping for 9s. Reason: RUNNING 2024-12-10 03:38:01,982 Sleeping for 8s. Reason: RUNNING 2024-12-10 03:38:15,140 Setting max_seq=508, max_extra_seq=2048 2024-12-10 03:48:31,539 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=68.1 pTM=0.559 ipTM=0.24 2024-12-10 03:55:37,110 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=67.2 pTM=0.546 ipTM=0.237 tol=15.6 2024-12-10 04:02:42,411 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=66.1 pTM=0.536 ipTM=0.261 tol=6.43 2024-12-10 04:09:47,708 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=66.1 pTM=0.537 ipTM=0.264 tol=6.53 2024-12-10 04:16:53,106 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=66.6 pTM=0.536 ipTM=0.251 tol=7.88 2024-12-10 04:23:58,616 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=66.4 pTM=0.531 ipTM=0.247 tol=4.19 2024-12-10 04:31:04,145 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=66.4 pTM=0.527 ipTM=0.243 tol=7.48 2024-12-10 04:38:09,645 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=66.3 pTM=0.531 ipTM=0.243 tol=8 2024-12-10 04:45:15,110 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=66.3 pTM=0.534 ipTM=0.243 tol=3.39 2024-12-10 04:52:20,709 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=65.9 pTM=0.532 ipTM=0.246 tol=3.45 2024-12-10 04:59:26,169 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=65.8 pTM=0.524 ipTM=0.244 tol=3.22 2024-12-10 05:06:31,656 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=65.9 pTM=0.536 ipTM=0.242 tol=2.05 2024-12-10 05:13:37,140 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=65.6 pTM=0.532 ipTM=0.254 tol=4.18 2024-12-10 05:20:42,632 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=67.3 pTM=0.534 ipTM=0.243 tol=2.97 2024-12-10 05:27:48,006 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=65.9 pTM=0.532 ipTM=0.24 tol=2.37 2024-12-10 05:34:53,619 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=65.5 pTM=0.531 ipTM=0.239 tol=2.06 2024-12-10 05:41:59,231 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=64.3 pTM=0.533 ipTM=0.237 tol=19.3 2024-12-10 05:49:05,013 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=64.2 pTM=0.514 ipTM=0.251 tol=10.5 2024-12-10 05:56:10,523 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=64.4 pTM=0.522 ipTM=0.29 tol=9.88 2024-12-10 06:03:16,106 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=65.9 pTM=0.521 ipTM=0.241 tol=11.4 2024-12-10 06:10:21,654 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=65.5 pTM=0.525 ipTM=0.234 tol=7.02 2024-12-10 06:17:27,322 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=65.8 pTM=0.524 ipTM=0.237 tol=7.23 2024-12-10 06:24:32,777 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=66.4 pTM=0.529 ipTM=0.23 tol=8.09 2024-12-10 06:31:38,274 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=66.9 pTM=0.536 ipTM=0.238 tol=3.6 2024-12-10 06:38:43,780 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=66.2 pTM=0.533 ipTM=0.239 tol=3.28 2024-12-10 06:45:49,047 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=67.1 pTM=0.536 ipTM=0.237 tol=3.04 2024-12-10 06:52:54,278 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=66.7 pTM=0.538 ipTM=0.245 tol=1.89 2024-12-10 06:59:59,676 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=66.3 pTM=0.537 ipTM=0.234 tol=3.78 2024-12-10 07:07:05,071 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=66.9 pTM=0.533 ipTM=0.236 tol=3.52 2024-12-10 07:14:10,519 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=66.3 pTM=0.539 ipTM=0.232 tol=2.17 2024-12-10 07:21:15,916 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=66.2 pTM=0.536 ipTM=0.234 tol=5.98 2024-12-10 07:21:15,920 alphafold2_multimer_v3_model_1_seed_000 took 13375.8s (30 recycles) 2024-12-10 07:28:26,324 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=67 pTM=0.547 ipTM=0.275 2024-12-10 07:35:32,048 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=67.2 pTM=0.543 ipTM=0.251 tol=13.8 2024-12-10 07:42:37,817 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=67.2 pTM=0.53 ipTM=0.269 tol=4.47 2024-12-10 07:49:43,604 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=66.5 pTM=0.52 ipTM=0.275 tol=5.57 2024-12-10 07:56:49,438 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=64.8 pTM=0.521 ipTM=0.247 tol=20.6 2024-12-10 08:03:55,183 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=66.4 pTM=0.521 ipTM=0.25 tol=8.8 2024-12-10 08:11:00,853 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=66.6 pTM=0.518 ipTM=0.248 tol=6.94 2024-12-10 08:18:06,532 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=66.8 pTM=0.516 ipTM=0.242 tol=3.81 2024-12-10 08:25:12,149 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=67.1 pTM=0.524 ipTM=0.238 tol=4.52 2024-12-10 08:32:17,709 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=66.9 pTM=0.521 ipTM=0.236 tol=2.47 2024-12-10 08:39:23,255 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=66.5 pTM=0.515 ipTM=0.238 tol=2.01 2024-12-10 08:46:29,000 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=66.7 pTM=0.519 ipTM=0.235 tol=2.24 2024-12-10 08:53:34,736 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=66.6 pTM=0.519 ipTM=0.234 tol=1.45 2024-12-10 09:00:40,468 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=67.1 pTM=0.52 ipTM=0.242 tol=1.88 2024-12-10 09:07:46,161 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=66.8 pTM=0.516 ipTM=0.233 tol=1.72 2024-12-10 09:14:51,940 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=66.5 pTM=0.518 ipTM=0.235 tol=2.37 2024-12-10 09:21:57,690 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=66.7 pTM=0.519 ipTM=0.235 tol=1.83 2024-12-10 09:29:03,491 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=66.8 pTM=0.517 ipTM=0.243 tol=1.64 2024-12-10 09:36:09,215 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=67.1 pTM=0.522 ipTM=0.235 tol=1.64 2024-12-10 09:43:15,070 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=67 pTM=0.524 ipTM=0.234 tol=1.49 2024-12-10 09:50:20,758 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=67.4 pTM=0.523 ipTM=0.235 tol=2.3 2024-12-10 09:57:26,420 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=67 pTM=0.52 ipTM=0.236 tol=1.94 2024-12-10 10:04:32,145 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=67.1 pTM=0.52 ipTM=0.235 tol=1.77 2024-12-10 10:11:37,899 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=67.4 pTM=0.524 ipTM=0.234 tol=1.97 2024-12-10 10:18:43,582 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=66.9 pTM=0.519 ipTM=0.235 tol=1.93 2024-12-10 10:25:49,407 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=67.1 pTM=0.523 ipTM=0.235 tol=1.61 2024-12-10 10:32:55,140 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=67.4 pTM=0.523 ipTM=0.235 tol=1.45 2024-12-10 10:40:00,817 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=66.9 pTM=0.521 ipTM=0.236 tol=1.81 2024-12-10 10:47:06,384 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=67 pTM=0.521 ipTM=0.235 tol=1.73 2024-12-10 10:54:11,942 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=66.9 pTM=0.521 ipTM=0.239 tol=2.01 2024-12-10 11:01:17,694 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=66.8 pTM=0.521 ipTM=0.237 tol=1.85 2024-12-10 11:01:17,698 alphafold2_multimer_v3_model_2_seed_000 took 13197.4s (30 recycles) 2024-12-10 11:08:28,471 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=71.2 pTM=0.59 ipTM=0.238 2024-12-10 11:15:34,180 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=72.9 pTM=0.623 ipTM=0.261 tol=20.4 2024-12-10 11:22:39,591 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=72.6 pTM=0.615 ipTM=0.262 tol=6.66 2024-12-10 11:29:45,152 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=71.9 pTM=0.607 ipTM=0.263 tol=4.29 2024-12-10 11:36:50,522 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=72.5 pTM=0.623 ipTM=0.273 tol=5.9 2024-12-10 11:43:55,842 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=72.2 pTM=0.615 ipTM=0.259 tol=5.66 2024-12-10 11:51:01,127 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=72.4 pTM=0.62 ipTM=0.261 tol=4.12 2024-12-10 11:58:06,402 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=72.1 pTM=0.622 ipTM=0.258 tol=4.24 2024-12-10 12:05:11,520 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=72.3 pTM=0.627 ipTM=0.26 tol=3.12 2024-12-10 12:12:16,729 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=72.6 pTM=0.628 ipTM=0.262 tol=3.83 2024-12-10 12:19:22,018 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=71.9 pTM=0.624 ipTM=0.257 tol=6.24 2024-12-10 12:26:27,390 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=72.4 pTM=0.634 ipTM=0.257 tol=4.42 2024-12-10 12:33:32,544 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=72 pTM=0.632 ipTM=0.26 tol=2.94 2024-12-10 12:40:37,745 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=72.1 pTM=0.633 ipTM=0.266 tol=3.06 2024-12-10 12:47:43,102 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=72.2 pTM=0.631 ipTM=0.265 tol=3.08 2024-12-10 12:54:48,341 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=72 pTM=0.628 ipTM=0.256 tol=3.7 2024-12-10 13:01:53,528 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=72.2 pTM=0.634 ipTM=0.252 tol=4.32 2024-12-10 13:08:58,668 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=72 pTM=0.627 ipTM=0.258 tol=3.23 2024-12-10 13:16:03,880 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=72.7 pTM=0.631 ipTM=0.256 tol=6.78 2024-12-10 13:23:09,121 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=72.1 pTM=0.622 ipTM=0.26 tol=3.73 2024-12-10 13:30:14,478 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=72.6 pTM=0.631 ipTM=0.268 tol=6.21 2024-12-10 13:37:19,767 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=72.2 pTM=0.625 ipTM=0.266 tol=4.67 2024-12-10 13:44:25,099 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=73.2 pTM=0.636 ipTM=0.269 tol=1.64 2024-12-10 13:51:30,341 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=72.8 pTM=0.632 ipTM=0.259 tol=1.79 2024-12-10 13:58:35,489 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=72.8 pTM=0.632 ipTM=0.26 tol=2.46 2024-12-10 14:05:40,874 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=72.6 pTM=0.633 ipTM=0.26 tol=3.14 2024-12-10 14:12:46,277 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=72.8 pTM=0.634 ipTM=0.26 tol=2.26 2024-12-10 14:19:51,627 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=72.2 pTM=0.631 ipTM=0.256 tol=2.67 2024-12-10 14:26:56,886 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=72.7 pTM=0.632 ipTM=0.252 tol=3.06 2024-12-10 14:34:02,196 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=72.8 pTM=0.632 ipTM=0.256 tol=1.99 2024-12-10 14:41:07,540 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=72.3 pTM=0.631 ipTM=0.256 tol=2.34 2024-12-10 14:41:07,544 alphafold2_multimer_v3_model_3_seed_000 took 13185.5s (30 recycles) 2024-12-10 14:48:18,259 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=68.9 pTM=0.584 ipTM=0.353 2024-12-10 14:55:25,367 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=70.4 pTM=0.591 ipTM=0.238 tol=15.5 2024-12-10 15:02:31,095 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=69.9 pTM=0.614 ipTM=0.237 tol=18.8 2024-12-10 15:09:36,772 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=69.4 pTM=0.62 ipTM=0.24 tol=7.16 2024-12-10 15:16:43,761 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=70.2 pTM=0.624 ipTM=0.242 tol=8.91 2024-12-10 15:23:49,433 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=69.7 pTM=0.621 ipTM=0.241 tol=4.69 2024-12-10 15:30:55,706 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=69.5 pTM=0.619 ipTM=0.243 tol=6.55 2024-12-10 15:38:02,503 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=69.3 pTM=0.618 ipTM=0.27 tol=5.79 2024-12-10 15:45:08,562 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=70.4 pTM=0.625 ipTM=0.321 tol=8.35 2024-12-10 15:52:15,455 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=69.7 pTM=0.618 ipTM=0.279 tol=8.35 2024-12-10 15:59:22,636 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=69.2 pTM=0.614 ipTM=0.242 tol=6.34 2024-12-10 16:06:28,245 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=69.1 pTM=0.619 ipTM=0.245 tol=5.47 2024-12-10 16:13:34,483 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=70.1 pTM=0.62 ipTM=0.276 tol=5.18 2024-12-10 16:20:40,049 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=70.2 pTM=0.622 ipTM=0.294 tol=4.93 2024-12-10 16:27:45,631 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=69.3 pTM=0.615 ipTM=0.259 tol=4.38 2024-12-10 16:34:52,947 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=69.9 pTM=0.616 ipTM=0.296 tol=3.68 2024-12-10 16:42:00,876 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=70.1 pTM=0.623 ipTM=0.338 tol=5.06 2024-12-10 16:49:07,275 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=70.1 pTM=0.619 ipTM=0.312 tol=4.39 2024-12-10 16:56:14,039 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=70.1 pTM=0.621 ipTM=0.29 tol=4.66 2024-12-10 17:03:20,313 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=69.6 pTM=0.619 ipTM=0.282 tol=2.66 2024-12-10 17:10:26,869 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=69.6 pTM=0.616 ipTM=0.266 tol=3.47 2024-12-10 17:17:33,416 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=69.9 pTM=0.617 ipTM=0.291 tol=3.93 2024-12-10 17:24:38,664 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=69.9 pTM=0.621 ipTM=0.279 tol=4.05 2024-12-10 17:31:45,816 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=69.8 pTM=0.619 ipTM=0.266 tol=3.88 2024-12-10 17:38:51,190 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=69.8 pTM=0.616 ipTM=0.264 tol=6.37 2024-12-10 17:45:56,522 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=69.7 pTM=0.62 ipTM=0.293 tol=5.89 2024-12-10 17:53:02,207 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=70.1 pTM=0.62 ipTM=0.301 tol=5.45 2024-12-10 18:00:08,436 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=69.9 pTM=0.62 ipTM=0.273 tol=6.81 2024-12-10 18:07:13,915 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=69.8 pTM=0.62 ipTM=0.294 tol=4.61 2024-12-10 18:14:19,515 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=70 pTM=0.619 ipTM=0.331 tol=5.36 2024-12-10 18:21:24,980 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=70.2 pTM=0.619 ipTM=0.285 tol=6.43 2024-12-10 18:21:25,098 alphafold2_multimer_v3_model_4_seed_000 took 13213.1s (30 recycles) 2024-12-10 18:28:35,794 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=69.2 pTM=0.599 ipTM=0.271 2024-12-10 18:35:41,407 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=72.9 pTM=0.628 ipTM=0.283 tol=10.6 2024-12-10 18:42:49,469 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=72.4 pTM=0.63 ipTM=0.27 tol=4.52 2024-12-10 18:49:54,782 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=71.8 pTM=0.627 ipTM=0.265 tol=4.81 2024-12-10 18:57:00,479 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=73.2 pTM=0.638 ipTM=0.263 tol=3.68 2024-12-10 19:04:09,526 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=72.9 pTM=0.637 ipTM=0.28 tol=1.9 2024-12-10 19:11:16,797 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=72.4 pTM=0.636 ipTM=0.269 tol=3.74 2024-12-10 19:18:22,715 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=72.7 pTM=0.635 ipTM=0.281 tol=2.16 2024-12-10 19:25:28,009 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=73.1 pTM=0.637 ipTM=0.269 tol=3.75 2024-12-10 19:32:33,081 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=73.1 pTM=0.638 ipTM=0.281 tol=3.3 2024-12-10 19:39:38,720 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=72.4 pTM=0.63 ipTM=0.267 tol=2.71 2024-12-10 19:46:43,975 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=72.4 pTM=0.634 ipTM=0.286 tol=5.96 2024-12-10 19:53:49,821 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=72.9 pTM=0.635 ipTM=0.274 tol=3.14 2024-12-10 20:00:56,613 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=72.9 pTM=0.638 ipTM=0.29 tol=6.86 2024-12-10 20:08:03,087 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=72.5 pTM=0.632 ipTM=0.262 tol=3.72 2024-12-10 20:15:09,221 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=72.7 pTM=0.633 ipTM=0.279 tol=2.76 2024-12-10 20:22:14,657 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=72.2 pTM=0.631 ipTM=0.257 tol=3.56 2024-12-10 20:29:21,792 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=72.8 pTM=0.632 ipTM=0.261 tol=2.93 2024-12-10 20:36:27,203 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=72.2 pTM=0.63 ipTM=0.255 tol=3.79 2024-12-10 20:43:33,312 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=72.8 pTM=0.635 ipTM=0.257 tol=2.42 2024-12-10 20:50:39,067 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=72.6 pTM=0.632 ipTM=0.262 tol=3.23 2024-12-10 20:57:47,896 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=72.2 pTM=0.631 ipTM=0.255 tol=1.71 2024-12-10 21:04:53,281 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=73.4 pTM=0.632 ipTM=0.249 tol=3.67 2024-12-10 21:11:58,757 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=73 pTM=0.638 ipTM=0.25 tol=1.63 2024-12-10 21:19:04,067 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=72.3 pTM=0.631 ipTM=0.244 tol=4.57 2024-12-10 21:26:09,335 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=73.1 pTM=0.634 ipTM=0.245 tol=3.5 2024-12-10 21:33:14,495 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=72.8 pTM=0.633 ipTM=0.246 tol=2.14 2024-12-10 21:40:19,583 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=72.7 pTM=0.635 ipTM=0.242 tol=3.75 2024-12-10 21:47:24,760 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=72.9 pTM=0.63 ipTM=0.243 tol=4.27 2024-12-10 21:54:30,033 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=73.3 pTM=0.64 ipTM=0.251 tol=4.04 2024-12-10 22:01:35,363 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=72.8 pTM=0.638 ipTM=0.241 tol=4.19 2024-12-10 22:01:35,383 alphafold2_multimer_v3_model_5_seed_000 took 13205.9s (30 recycles) 2024-12-10 22:01:39,804 reranking models by 'multimer' metric 2024-12-10 22:01:46,642 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-12-10 22:19:25,014 Relaxation took 1065.2s 2024-12-10 22:19:25,015 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=70.2 pTM=0.619 ipTM=0.285 2024-12-10 22:30:16,822 Relaxation took 651.8s 2024-12-10 22:30:16,822 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=72.3 pTM=0.631 ipTM=0.256 2024-12-10 22:42:03,157 Relaxation took 706.3s 2024-12-10 22:42:03,157 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=72.8 pTM=0.638 ipTM=0.241 2024-12-10 22:50:37,148 Relaxation took 514.0s 2024-12-10 22:50:37,149 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=66.2 pTM=0.536 ipTM=0.234 2024-12-10 23:03:12,522 Relaxation took 755.4s 2024-12-10 23:03:12,523 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=66.8 pTM=0.521 ipTM=0.237 2024-12-10 23:03:23,214 Done