2024-12-10 03:40:39,401 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-12-10 03:40:39,710 Running on GPU 2024-12-10 03:40:43,412 Found 6 citations for tools or databases 2024-12-10 03:40:43,412 Query 1/1: ZNRF4_ABCA3 (length 2133) 2024-12-10 03:40:43,713 Sleeping for 7s. Reason: PENDING 2024-12-10 03:40:50,974 Sleeping for 5s. Reason: RUNNING 2024-12-10 03:40:56,231 Sleeping for 7s. Reason: RUNNING 2024-12-10 03:41:03,492 Sleeping for 9s. Reason: RUNNING 2024-12-10 03:41:12,750 Sleeping for 6s. Reason: RUNNING 2024-12-10 03:41:19,007 Sleeping for 6s. Reason: RUNNING 2024-12-10 03:41:25,264 Sleeping for 10s. Reason: RUNNING 2024-12-10 03:41:35,525 Sleeping for 10s. Reason: RUNNING 2024-12-10 03:41:45,793 Sleeping for 9s. Reason: RUNNING 2024-12-10 03:41:55,054 Sleeping for 9s. Reason: RUNNING 2024-12-10 03:42:04,311 Sleeping for 7s. Reason: RUNNING 2024-12-10 03:42:11,565 Sleeping for 5s. Reason: RUNNING 2024-12-10 03:42:16,817 Sleeping for 9s. Reason: RUNNING 2024-12-10 03:42:26,075 Sleeping for 7s. Reason: RUNNING 2024-12-10 03:42:33,332 Sleeping for 9s. Reason: RUNNING 2024-12-10 03:42:42,599 Sleeping for 10s. Reason: RUNNING 2024-12-10 03:42:52,864 Sleeping for 10s. Reason: RUNNING 2024-12-10 03:43:03,122 Sleeping for 10s. Reason: RUNNING 2024-12-10 03:43:13,378 Sleeping for 7s. Reason: RUNNING 2024-12-10 03:43:20,634 Sleeping for 8s. Reason: RUNNING 2024-12-10 03:43:28,891 Sleeping for 5s. Reason: RUNNING 2024-12-10 03:43:34,142 Sleeping for 10s. Reason: RUNNING 2024-12-10 03:43:44,413 Sleeping for 8s. Reason: RUNNING 2024-12-10 03:43:52,667 Sleeping for 9s. Reason: RUNNING 2024-12-10 03:44:01,927 Sleeping for 8s. Reason: RUNNING 2024-12-10 03:44:10,187 Sleeping for 6s. Reason: RUNNING 2024-12-10 03:44:16,447 Sleeping for 7s. Reason: RUNNING 2024-12-10 03:44:23,706 Sleeping for 6s. Reason: RUNNING 2024-12-10 03:44:29,960 Sleeping for 7s. Reason: RUNNING 2024-12-10 03:44:37,218 Sleeping for 9s. Reason: RUNNING 2024-12-10 03:44:46,483 Sleeping for 10s. Reason: RUNNING 2024-12-10 03:44:56,744 Sleeping for 9s. Reason: RUNNING 2024-12-10 03:45:06,010 Sleeping for 6s. Reason: RUNNING 2024-12-10 03:45:12,272 Sleeping for 5s. Reason: RUNNING 2024-12-10 03:45:17,525 Sleeping for 5s. Reason: RUNNING 2024-12-10 03:45:22,777 Sleeping for 7s. Reason: RUNNING 2024-12-10 03:45:30,032 Sleeping for 7s. Reason: RUNNING 2024-12-10 03:45:37,291 Sleeping for 5s. Reason: RUNNING 2024-12-10 03:45:42,547 Sleeping for 9s. Reason: RUNNING 2024-12-10 03:45:51,806 Sleeping for 8s. Reason: RUNNING 2024-12-10 03:46:00,069 Sleeping for 5s. Reason: RUNNING 2024-12-10 03:46:05,328 Sleeping for 7s. Reason: RUNNING 2024-12-10 03:46:12,582 Sleeping for 7s. Reason: RUNNING 2024-12-10 03:46:19,834 Sleeping for 10s. Reason: RUNNING 2024-12-10 03:46:30,097 Sleeping for 8s. Reason: RUNNING 2024-12-10 03:46:38,363 Sleeping for 8s. Reason: RUNNING 2024-12-10 03:46:46,619 Sleeping for 10s. Reason: RUNNING 2024-12-10 03:46:56,885 Sleeping for 5s. Reason: RUNNING 2024-12-10 03:47:02,138 Sleeping for 9s. Reason: RUNNING 2024-12-10 03:47:11,412 Sleeping for 9s. Reason: RUNNING 2024-12-10 03:47:20,672 Sleeping for 8s. Reason: RUNNING 2024-12-10 03:47:28,928 Sleeping for 5s. Reason: RUNNING 2024-12-10 03:47:34,184 Sleeping for 7s. Reason: RUNNING 2024-12-10 03:47:41,437 Sleeping for 5s. Reason: RUNNING 2024-12-10 03:47:46,695 Sleeping for 9s. Reason: RUNNING 2024-12-10 03:47:55,953 Sleeping for 7s. Reason: RUNNING 2024-12-10 03:48:03,203 Sleeping for 5s. Reason: RUNNING 2024-12-10 03:48:08,454 Sleeping for 5s. Reason: RUNNING 2024-12-10 03:48:13,713 Sleeping for 8s. Reason: RUNNING 2024-12-10 03:48:21,969 Sleeping for 8s. Reason: RUNNING 2024-12-10 03:48:30,226 Sleeping for 6s. Reason: RUNNING 2024-12-10 03:48:36,483 Sleeping for 8s. Reason: RUNNING 2024-12-10 03:48:44,744 Sleeping for 7s. Reason: RUNNING 2024-12-10 03:48:52,008 Sleeping for 5s. Reason: RUNNING 2024-12-10 03:48:57,268 Sleeping for 6s. Reason: RUNNING 2024-12-10 03:49:03,523 Sleeping for 8s. Reason: RUNNING 2024-12-10 03:49:17,191 Sleeping for 10s. Reason: RUNNING 2024-12-10 03:49:27,454 Sleeping for 6s. Reason: RUNNING 2024-12-10 03:49:33,719 Sleeping for 8s. Reason: RUNNING 2024-12-10 03:49:41,981 Sleeping for 7s. Reason: RUNNING 2024-12-10 03:49:49,250 Sleeping for 10s. Reason: RUNNING 2024-12-10 03:49:59,512 Sleeping for 7s. Reason: RUNNING 2024-12-10 03:50:06,772 Sleeping for 8s. Reason: RUNNING 2024-12-10 03:50:15,040 Sleeping for 6s. Reason: RUNNING 2024-12-10 03:50:21,297 Sleeping for 5s. Reason: RUNNING 2024-12-10 03:50:26,556 Sleeping for 9s. Reason: RUNNING 2024-12-10 03:50:35,825 Sleeping for 7s. Reason: RUNNING 2024-12-10 03:50:43,086 Sleeping for 8s. Reason: RUNNING 2024-12-10 03:50:51,346 Sleeping for 9s. Reason: RUNNING 2024-12-10 03:51:00,616 Sleeping for 9s. Reason: RUNNING 2024-12-10 03:51:09,884 Sleeping for 10s. Reason: RUNNING 2024-12-10 03:51:20,150 Sleeping for 9s. Reason: RUNNING 2024-12-10 03:51:29,412 Sleeping for 7s. Reason: RUNNING 2024-12-10 03:51:36,673 Sleeping for 9s. Reason: RUNNING 2024-12-10 03:51:45,941 Sleeping for 6s. Reason: RUNNING 2024-12-10 03:51:52,203 Sleeping for 10s. Reason: RUNNING 2024-12-10 03:52:02,464 Sleeping for 9s. Reason: RUNNING 2024-12-10 03:52:11,724 Sleeping for 6s. Reason: RUNNING 2024-12-10 03:52:17,992 Sleeping for 10s. Reason: RUNNING 2024-12-10 03:52:28,265 Sleeping for 10s. Reason: RUNNING 2024-12-10 03:52:38,531 Sleeping for 5s. Reason: RUNNING 2024-12-10 03:52:43,788 Sleeping for 7s. Reason: RUNNING 2024-12-10 03:52:51,044 Sleeping for 6s. Reason: RUNNING 2024-12-10 03:52:57,309 Sleeping for 7s. Reason: RUNNING 2024-12-10 03:53:04,569 Sleeping for 7s. Reason: RUNNING 2024-12-10 03:53:11,837 Sleeping for 8s. Reason: RUNNING 2024-12-10 03:53:20,261 Sleeping for 9s. Reason: RUNNING 2024-12-10 03:53:29,522 Sleeping for 10s. Reason: RUNNING 2024-12-10 03:53:39,786 Sleeping for 10s. Reason: RUNNING 2024-12-10 03:53:53,265 Sleeping for 10s. Reason: PENDING 2024-12-10 03:54:03,527 Sleeping for 8s. Reason: RUNNING 2024-12-10 03:54:11,785 Sleeping for 7s. Reason: RUNNING 2024-12-10 03:54:19,192 Sleeping for 8s. Reason: RUNNING 2024-12-10 03:54:27,459 Sleeping for 9s. Reason: RUNNING 2024-12-10 03:54:36,721 Sleeping for 9s. Reason: RUNNING 2024-12-10 03:54:45,979 Sleeping for 6s. Reason: RUNNING 2024-12-10 03:54:52,229 Sleeping for 5s. Reason: RUNNING 2024-12-10 03:54:57,481 Sleeping for 6s. Reason: RUNNING 2024-12-10 03:55:03,733 Sleeping for 8s. Reason: RUNNING 2024-12-10 03:55:11,988 Sleeping for 10s. Reason: RUNNING 2024-12-10 03:55:22,243 Sleeping for 6s. Reason: RUNNING 2024-12-10 03:55:28,503 Sleeping for 5s. Reason: RUNNING 2024-12-10 03:55:33,759 Sleeping for 6s. Reason: RUNNING 2024-12-10 03:55:40,011 Sleeping for 7s. Reason: RUNNING 2024-12-10 03:55:47,268 Sleeping for 10s. Reason: RUNNING 2024-12-10 03:55:57,525 Sleeping for 8s. Reason: RUNNING 2024-12-10 03:56:05,786 Sleeping for 6s. Reason: RUNNING 2024-12-10 03:56:12,037 Sleeping for 7s. Reason: RUNNING 2024-12-10 03:56:19,292 Sleeping for 6s. Reason: RUNNING 2024-12-10 03:56:25,552 Sleeping for 6s. Reason: RUNNING 2024-12-10 03:56:31,818 Sleeping for 9s. Reason: RUNNING 2024-12-10 03:56:41,088 Sleeping for 10s. Reason: RUNNING 2024-12-10 03:56:51,348 Sleeping for 8s. Reason: RUNNING 2024-12-10 03:56:59,611 Sleeping for 7s. Reason: RUNNING 2024-12-10 03:57:06,872 Sleeping for 6s. Reason: RUNNING 2024-12-10 03:57:13,124 Sleeping for 5s. Reason: RUNNING 2024-12-10 03:57:18,374 Sleeping for 7s. Reason: RUNNING 2024-12-10 03:57:25,627 Sleeping for 9s. Reason: RUNNING 2024-12-10 03:57:34,885 Sleeping for 8s. Reason: RUNNING 2024-12-10 03:57:43,145 Sleeping for 6s. Reason: RUNNING 2024-12-10 03:57:49,408 Sleeping for 10s. Reason: RUNNING 2024-12-10 03:57:59,674 Sleeping for 5s. Reason: RUNNING 2024-12-10 03:58:04,930 Sleeping for 5s. Reason: RUNNING 2024-12-10 03:58:10,191 Sleeping for 5s. Reason: RUNNING 2024-12-10 03:58:15,451 Sleeping for 8s. Reason: RUNNING 2024-12-10 03:58:23,712 Sleeping for 9s. Reason: RUNNING 2024-12-10 03:58:32,976 Sleeping for 5s. Reason: RUNNING 2024-12-10 03:58:38,237 Sleeping for 7s. Reason: RUNNING 2024-12-10 03:58:45,495 Sleeping for 8s. Reason: RUNNING 2024-12-10 03:58:53,761 Sleeping for 10s. Reason: RUNNING 2024-12-10 03:59:04,028 Sleeping for 5s. Reason: RUNNING 2024-12-10 03:59:09,286 Sleeping for 8s. Reason: RUNNING 2024-12-10 03:59:17,547 Sleeping for 9s. Reason: RUNNING 2024-12-10 03:59:26,804 Sleeping for 8s. Reason: RUNNING 2024-12-10 03:59:35,070 Sleeping for 10s. Reason: RUNNING 2024-12-10 03:59:45,328 Sleeping for 8s. Reason: RUNNING 2024-12-10 03:59:53,586 Sleeping for 6s. Reason: RUNNING 2024-12-10 03:59:59,846 Sleeping for 10s. Reason: RUNNING 2024-12-10 04:00:10,108 Sleeping for 10s. Reason: RUNNING 2024-12-10 04:00:20,367 Sleeping for 6s. Reason: RUNNING 2024-12-10 04:00:26,623 Sleeping for 6s. Reason: RUNNING 2024-12-10 04:00:32,882 Sleeping for 6s. Reason: RUNNING 2024-12-10 04:00:39,147 Sleeping for 8s. Reason: RUNNING 2024-12-10 04:00:47,404 Sleeping for 5s. Reason: RUNNING 2024-12-10 04:00:52,667 Sleeping for 9s. Reason: RUNNING 2024-12-10 04:01:01,931 Sleeping for 5s. Reason: RUNNING 2024-12-10 04:01:07,194 Sleeping for 6s. Reason: RUNNING 2024-12-10 04:01:13,455 Sleeping for 6s. Reason: RUNNING 2024-12-10 04:01:19,714 Sleeping for 8s. Reason: RUNNING 2024-12-10 04:01:27,978 Sleeping for 7s. Reason: RUNNING 2024-12-10 04:01:35,240 Sleeping for 6s. Reason: RUNNING 2024-12-10 04:01:41,501 Sleeping for 6s. Reason: RUNNING 2024-12-10 04:01:47,759 Sleeping for 10s. Reason: RUNNING 2024-12-10 04:01:58,018 Sleeping for 8s. Reason: RUNNING 2024-12-10 04:02:06,292 Sleeping for 8s. Reason: RUNNING 2024-12-10 04:02:14,557 Sleeping for 9s. Reason: RUNNING 2024-12-10 04:02:23,814 Sleeping for 7s. Reason: RUNNING 2024-12-10 04:02:31,068 Sleeping for 9s. Reason: RUNNING 2024-12-10 04:02:40,331 Sleeping for 10s. Reason: RUNNING 2024-12-10 04:03:03,722 Setting max_seq=508, max_extra_seq=2048 2024-12-10 04:09:18,383 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=71.8 pTM=0.714 ipTM=0.29 2024-12-10 04:12:26,948 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=71.9 pTM=0.72 ipTM=0.297 tol=4.24 2024-12-10 04:15:35,566 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=72.2 pTM=0.719 ipTM=0.28 tol=2.22 2024-12-10 04:18:44,204 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=72.5 pTM=0.717 ipTM=0.29 tol=1.23 2024-12-10 04:21:52,952 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=72.8 pTM=0.719 ipTM=0.281 tol=1.25 2024-12-10 04:25:01,707 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=72.8 pTM=0.718 ipTM=0.281 tol=1.07 2024-12-10 04:28:10,378 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=73 pTM=0.72 ipTM=0.277 tol=1.24 2024-12-10 04:31:19,010 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=73 pTM=0.716 ipTM=0.273 tol=0.641 2024-12-10 04:34:27,585 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=73.3 pTM=0.72 ipTM=0.281 tol=1.15 2024-12-10 04:37:36,240 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=73.2 pTM=0.721 ipTM=0.279 tol=0.768 2024-12-10 04:40:44,903 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=73.2 pTM=0.72 ipTM=0.279 tol=0.86 2024-12-10 04:43:53,568 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=73.4 pTM=0.722 ipTM=0.279 tol=0.663 2024-12-10 04:47:02,239 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=73.3 pTM=0.719 ipTM=0.282 tol=1.07 2024-12-10 04:50:10,915 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=73.4 pTM=0.72 ipTM=0.283 tol=0.93 2024-12-10 04:53:19,593 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=73.4 pTM=0.72 ipTM=0.283 tol=1.26 2024-12-10 04:56:28,255 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=73.4 pTM=0.722 ipTM=0.286 tol=0.723 2024-12-10 04:59:36,960 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=73.4 pTM=0.722 ipTM=0.286 tol=0.787 2024-12-10 05:02:45,527 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=73.5 pTM=0.723 ipTM=0.289 tol=0.919 2024-12-10 05:05:54,060 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=73.4 pTM=0.722 ipTM=0.295 tol=0.862 2024-12-10 05:09:02,608 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=73.6 pTM=0.725 ipTM=0.313 tol=1.25 2024-12-10 05:12:11,018 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=73.5 pTM=0.724 ipTM=0.312 tol=1.09 2024-12-10 05:15:19,403 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=73.6 pTM=0.723 ipTM=0.301 tol=0.812 2024-12-10 05:18:27,798 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=73.5 pTM=0.723 ipTM=0.306 tol=1.07 2024-12-10 05:21:36,292 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=73.6 pTM=0.725 ipTM=0.304 tol=0.901 2024-12-10 05:24:44,892 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=73.5 pTM=0.724 ipTM=0.302 tol=0.501 2024-12-10 05:27:53,352 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=73.5 pTM=0.722 ipTM=0.313 tol=0.667 2024-12-10 05:31:01,830 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=73.3 pTM=0.719 ipTM=0.303 tol=0.648 2024-12-10 05:34:10,378 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=73.4 pTM=0.72 ipTM=0.305 tol=0.944 2024-12-10 05:37:18,969 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=73.2 pTM=0.718 ipTM=0.306 tol=1.09 2024-12-10 05:40:27,539 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=73.2 pTM=0.718 ipTM=0.302 tol=1.08 2024-12-10 05:43:35,968 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=73.4 pTM=0.719 ipTM=0.303 tol=1.3 2024-12-10 05:43:35,970 alphafold2_multimer_v3_model_1_seed_000 took 6027.1s (30 recycles) 2024-12-10 05:46:47,027 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=72.2 pTM=0.724 ipTM=0.32 2024-12-10 05:49:55,533 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=72.4 pTM=0.715 ipTM=0.315 tol=3.25 2024-12-10 05:53:04,270 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=72.3 pTM=0.714 ipTM=0.297 tol=4.65 2024-12-10 05:56:13,065 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=72.5 pTM=0.705 ipTM=0.29 tol=4.07 2024-12-10 05:59:21,766 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=72.6 pTM=0.706 ipTM=0.29 tol=3.72 2024-12-10 06:02:30,448 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=72.8 pTM=0.708 ipTM=0.292 tol=2.41 2024-12-10 06:05:38,991 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=73.4 pTM=0.713 ipTM=0.338 tol=1.82 2024-12-10 06:08:47,546 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=73.1 pTM=0.708 ipTM=0.324 tol=0.815 2024-12-10 06:11:56,213 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=73 pTM=0.708 ipTM=0.296 tol=1.09 2024-12-10 06:15:04,860 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=72.8 pTM=0.707 ipTM=0.298 tol=1.43 2024-12-10 06:18:13,596 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=72.7 pTM=0.705 ipTM=0.29 tol=1.02 2024-12-10 06:21:22,332 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=72.8 pTM=0.705 ipTM=0.293 tol=1.48 2024-12-10 06:24:30,949 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=72.6 pTM=0.702 ipTM=0.293 tol=0.816 2024-12-10 06:27:39,632 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=73.2 pTM=0.709 ipTM=0.341 tol=2.01 2024-12-10 06:30:48,456 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=73 pTM=0.706 ipTM=0.321 tol=1.73 2024-12-10 06:33:57,101 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=72.8 pTM=0.706 ipTM=0.294 tol=2.21 2024-12-10 06:37:05,754 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=72.8 pTM=0.704 ipTM=0.289 tol=2.6 2024-12-10 06:40:14,422 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=72.8 pTM=0.703 ipTM=0.288 tol=2.47 2024-12-10 06:43:23,057 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=72.8 pTM=0.699 ipTM=0.292 tol=1.08 2024-12-10 06:46:31,669 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=72.8 pTM=0.702 ipTM=0.302 tol=2.58 2024-12-10 06:49:40,417 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=72.9 pTM=0.705 ipTM=0.329 tol=1.06 2024-12-10 06:52:49,099 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=72.9 pTM=0.702 ipTM=0.314 tol=1.25 2024-12-10 06:55:57,758 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=72.8 pTM=0.7 ipTM=0.294 tol=1.49 2024-12-10 06:59:06,422 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=72.8 pTM=0.702 ipTM=0.294 tol=1.18 2024-12-10 07:02:15,064 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=72.8 pTM=0.702 ipTM=0.289 tol=0.792 2024-12-10 07:05:23,755 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=72.6 pTM=0.698 ipTM=0.287 tol=0.948 2024-12-10 07:08:32,472 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=72.7 pTM=0.698 ipTM=0.288 tol=0.728 2024-12-10 07:11:41,120 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=72.7 pTM=0.698 ipTM=0.287 tol=1.26 2024-12-10 07:14:49,835 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=72.6 pTM=0.7 ipTM=0.285 tol=1.23 2024-12-10 07:17:58,586 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=72.7 pTM=0.699 ipTM=0.292 tol=1.48 2024-12-10 07:21:07,365 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=73 pTM=0.703 ipTM=0.312 tol=1.76 2024-12-10 07:21:07,367 alphafold2_multimer_v3_model_2_seed_000 took 5848.8s (30 recycles) 2024-12-10 07:24:18,570 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=73.3 pTM=0.705 ipTM=0.283 2024-12-10 07:27:27,236 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=73.4 pTM=0.711 ipTM=0.285 tol=3.52 2024-12-10 07:30:36,055 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=73 pTM=0.708 ipTM=0.283 tol=5.93 2024-12-10 07:33:44,911 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=73 pTM=0.704 ipTM=0.283 tol=10.7 2024-12-10 07:36:53,737 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=72.9 pTM=0.707 ipTM=0.286 tol=6.56 2024-12-10 07:40:02,585 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=73.2 pTM=0.71 ipTM=0.287 tol=7.62 2024-12-10 07:43:11,470 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=73.2 pTM=0.709 ipTM=0.292 tol=2.5 2024-12-10 07:46:20,347 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=73 pTM=0.706 ipTM=0.289 tol=3.21 2024-12-10 07:49:29,181 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=73.1 pTM=0.708 ipTM=0.281 tol=1.61 2024-12-10 07:52:38,003 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=73 pTM=0.708 ipTM=0.283 tol=2.47 2024-12-10 07:55:46,830 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=73.1 pTM=0.707 ipTM=0.275 tol=2.06 2024-12-10 07:58:55,609 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=73.1 pTM=0.708 ipTM=0.279 tol=4.69 2024-12-10 08:02:04,322 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=72.9 pTM=0.701 ipTM=0.269 tol=7.27 2024-12-10 08:05:13,070 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=73 pTM=0.706 ipTM=0.281 tol=2.2 2024-12-10 08:08:22,000 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=72.8 pTM=0.702 ipTM=0.254 tol=3.77 2024-12-10 08:11:30,878 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=72.8 pTM=0.705 ipTM=0.278 tol=5.61 2024-12-10 08:14:39,824 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=72.7 pTM=0.7 ipTM=0.259 tol=3.74 2024-12-10 08:17:48,695 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=73.1 pTM=0.708 ipTM=0.281 tol=3.42 2024-12-10 08:20:57,465 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=73.1 pTM=0.707 ipTM=0.28 tol=2.24 2024-12-10 08:24:06,233 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=73.1 pTM=0.707 ipTM=0.284 tol=2.9 2024-12-10 08:27:15,109 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=72.9 pTM=0.702 ipTM=0.26 tol=3.62 2024-12-10 08:30:23,874 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=73.1 pTM=0.707 ipTM=0.279 tol=3.59 2024-12-10 08:33:32,782 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=73.2 pTM=0.702 ipTM=0.272 tol=11.9 2024-12-10 08:36:41,458 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=73.1 pTM=0.706 ipTM=0.266 tol=9.59 2024-12-10 08:39:50,048 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=73.2 pTM=0.71 ipTM=0.281 tol=3.03 2024-12-10 08:42:58,673 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=73.1 pTM=0.706 ipTM=0.274 tol=1.81 2024-12-10 08:46:07,273 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=73.2 pTM=0.708 ipTM=0.285 tol=2.62 2024-12-10 08:49:15,943 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=72.9 pTM=0.7 ipTM=0.255 tol=4.5 2024-12-10 08:52:24,564 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=72.9 pTM=0.703 ipTM=0.275 tol=4.11 2024-12-10 08:55:33,261 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=72.8 pTM=0.7 ipTM=0.255 tol=4.28 2024-12-10 08:58:41,873 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=73.1 pTM=0.704 ipTM=0.28 tol=5.01 2024-12-10 08:58:41,876 alphafold2_multimer_v3_model_3_seed_000 took 5851.9s (30 recycles) 2024-12-10 09:01:52,906 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=72.2 pTM=0.709 ipTM=0.298 2024-12-10 09:05:01,441 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=72.4 pTM=0.691 ipTM=0.293 tol=3.48 2024-12-10 09:08:10,053 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=72.1 pTM=0.68 ipTM=0.281 tol=5.15 2024-12-10 09:11:18,669 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=72.5 pTM=0.684 ipTM=0.284 tol=9.05 2024-12-10 09:14:27,198 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=72.9 pTM=0.689 ipTM=0.299 tol=3.6 2024-12-10 09:17:35,785 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=73.6 pTM=0.703 ipTM=0.363 tol=4.97 2024-12-10 09:20:44,353 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=74.1 pTM=0.709 ipTM=0.4 tol=4.29 2024-12-10 09:23:52,839 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=74.4 pTM=0.714 ipTM=0.429 tol=1.85 2024-12-10 09:27:01,358 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=74.6 pTM=0.719 ipTM=0.432 tol=1.64 2024-12-10 09:30:09,847 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=74.8 pTM=0.722 ipTM=0.442 tol=1.89 2024-12-10 09:33:18,276 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=74.8 pTM=0.726 ipTM=0.444 tol=1.72 2024-12-10 09:36:26,750 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=75 pTM=0.726 ipTM=0.447 tol=1.95 2024-12-10 09:39:35,300 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=74.8 pTM=0.727 ipTM=0.443 tol=3.01 2024-12-10 09:42:43,770 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=74.8 pTM=0.725 ipTM=0.442 tol=1.26 2024-12-10 09:45:52,189 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=74.8 pTM=0.729 ipTM=0.442 tol=1.08 2024-12-10 09:49:00,553 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=74.7 pTM=0.725 ipTM=0.443 tol=1.18 2024-12-10 09:52:08,954 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=74.7 pTM=0.728 ipTM=0.443 tol=1.95 2024-12-10 09:55:17,352 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=74.9 pTM=0.727 ipTM=0.446 tol=2.19 2024-12-10 09:58:25,789 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=74.8 pTM=0.729 ipTM=0.446 tol=1.18 2024-12-10 10:01:34,212 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=74.9 pTM=0.727 ipTM=0.452 tol=1.6 2024-12-10 10:04:42,659 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=74.8 pTM=0.729 ipTM=0.448 tol=1.57 2024-12-10 10:07:51,108 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=74.9 pTM=0.728 ipTM=0.449 tol=1.33 2024-12-10 10:10:59,543 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=74.8 pTM=0.729 ipTM=0.444 tol=0.963 2024-12-10 10:14:07,981 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=74.9 pTM=0.726 ipTM=0.444 tol=0.993 2024-12-10 10:17:16,427 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=74.8 pTM=0.728 ipTM=0.443 tol=1.52 2024-12-10 10:20:24,868 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=74.9 pTM=0.727 ipTM=0.445 tol=1.43 2024-12-10 10:23:33,277 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=74.8 pTM=0.73 ipTM=0.444 tol=1.43 2024-12-10 10:26:41,640 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=74.9 pTM=0.729 ipTM=0.441 tol=1.25 2024-12-10 10:29:50,041 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=74.7 pTM=0.729 ipTM=0.441 tol=0.938 2024-12-10 10:32:58,423 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=74.8 pTM=0.729 ipTM=0.443 tol=1.44 2024-12-10 10:36:06,868 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=74.9 pTM=0.732 ipTM=0.445 tol=1.6 2024-12-10 10:36:06,871 alphafold2_multimer_v3_model_4_seed_000 took 5842.4s (30 recycles) 2024-12-10 10:39:17,979 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=72.4 pTM=0.709 ipTM=0.301 2024-12-10 10:42:26,487 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=73 pTM=0.72 ipTM=0.308 tol=6.65 2024-12-10 10:45:35,019 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=72.6 pTM=0.717 ipTM=0.296 tol=3.94 2024-12-10 10:48:43,614 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=73.1 pTM=0.72 ipTM=0.298 tol=3.81 2024-12-10 10:51:52,192 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=73.2 pTM=0.722 ipTM=0.288 tol=2.79 2024-12-10 10:55:00,721 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=73.6 pTM=0.726 ipTM=0.29 tol=2.98 2024-12-10 10:58:09,269 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=73.6 pTM=0.728 ipTM=0.291 tol=2.38 2024-12-10 11:01:17,802 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=73.6 pTM=0.729 ipTM=0.297 tol=2.18 2024-12-10 11:04:26,397 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=73.6 pTM=0.73 ipTM=0.295 tol=1.25 2024-12-10 11:07:34,875 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=73.5 pTM=0.73 ipTM=0.298 tol=1.42 2024-12-10 11:10:43,389 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=73.7 pTM=0.732 ipTM=0.3 tol=1.77 2024-12-10 11:13:51,948 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=73.6 pTM=0.729 ipTM=0.289 tol=1.86 2024-12-10 11:17:00,533 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=73.4 pTM=0.729 ipTM=0.286 tol=1.64 2024-12-10 11:20:09,049 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=73.4 pTM=0.729 ipTM=0.285 tol=2.14 2024-12-10 11:23:17,561 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=73.4 pTM=0.729 ipTM=0.288 tol=0.758 2024-12-10 11:26:26,058 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=73.2 pTM=0.728 ipTM=0.288 tol=0.887 2024-12-10 11:29:34,683 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=73.4 pTM=0.73 ipTM=0.288 tol=0.75 2024-12-10 11:32:43,349 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=73.6 pTM=0.731 ipTM=0.288 tol=0.769 2024-12-10 11:35:52,014 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=73.4 pTM=0.729 ipTM=0.289 tol=0.714 2024-12-10 11:39:00,569 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=73.5 pTM=0.729 ipTM=0.293 tol=1.08 2024-12-10 11:42:09,095 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=73.6 pTM=0.731 ipTM=0.297 tol=1.04 2024-12-10 11:45:17,573 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=73.6 pTM=0.732 ipTM=0.309 tol=1.4 2024-12-10 11:48:26,119 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=73.8 pTM=0.733 ipTM=0.314 tol=0.821 2024-12-10 11:51:34,707 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=73.6 pTM=0.731 ipTM=0.3 tol=1.03 2024-12-10 11:54:43,400 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=73.6 pTM=0.732 ipTM=0.293 tol=1.02 2024-12-10 11:57:52,128 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=73.6 pTM=0.732 ipTM=0.299 tol=0.902 2024-12-10 12:01:00,831 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=73.8 pTM=0.737 ipTM=0.372 tol=1.78 2024-12-10 12:04:09,543 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=74.1 pTM=0.74 ipTM=0.417 tol=1.46 2024-12-10 12:07:18,185 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=73.9 pTM=0.738 ipTM=0.422 tol=1.08 2024-12-10 12:10:26,694 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=74 pTM=0.742 ipTM=0.453 tol=0.873 2024-12-10 12:13:35,298 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=74.2 pTM=0.742 ipTM=0.44 tol=1.11 2024-12-10 12:13:35,301 alphafold2_multimer_v3_model_5_seed_000 took 5845.8s (30 recycles) 2024-12-10 12:13:37,897 reranking models by 'multimer' metric 2024-12-10 12:13:39,909 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-12-10 12:18:36,320 Relaxation took 298.4s 2024-12-10 12:18:36,320 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=74.9 pTM=0.732 ipTM=0.445 2024-12-10 12:23:09,545 Relaxation took 273.2s 2024-12-10 12:23:09,545 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=74.2 pTM=0.742 ipTM=0.44 2024-12-10 12:29:37,908 Relaxation took 388.4s 2024-12-10 12:29:37,908 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=73 pTM=0.703 ipTM=0.312 2024-12-10 12:35:19,678 Relaxation took 341.8s 2024-12-10 12:35:19,678 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=73.4 pTM=0.719 ipTM=0.303 2024-12-10 12:39:24,412 Relaxation took 244.7s 2024-12-10 12:39:24,412 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=73.1 pTM=0.704 ipTM=0.28 2024-12-10 12:39:30,016 Done