2024-12-10 03:52:55,478 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-12-10 03:52:55,799 Running on GPU 2024-12-10 03:52:59,411 Found 6 citations for tools or databases 2024-12-10 03:52:59,411 Query 1/1: ZNRF4_ANO6 (length 1339) 2024-12-10 03:52:59,694 Sleeping for 10s. Reason: PENDING 2024-12-10 03:53:09,954 Sleeping for 6s. Reason: RUNNING 2024-12-10 03:53:16,213 Sleeping for 8s. Reason: RUNNING 2024-12-10 03:53:24,474 Sleeping for 5s. Reason: RUNNING 2024-12-10 03:53:29,734 Sleeping for 9s. Reason: RUNNING 2024-12-10 03:53:38,998 Sleeping for 10s. Reason: RUNNING 2024-12-10 03:53:49,254 Sleeping for 6s. Reason: RUNNING 2024-12-10 03:53:55,506 Sleeping for 7s. Reason: RUNNING 2024-12-10 03:54:02,771 Sleeping for 7s. Reason: RUNNING 2024-12-10 03:54:10,024 Sleeping for 10s. Reason: RUNNING 2024-12-10 03:54:20,282 Sleeping for 9s. Reason: RUNNING 2024-12-10 03:54:29,547 Sleeping for 5s. Reason: RUNNING 2024-12-10 03:54:34,806 Sleeping for 6s. Reason: RUNNING 2024-12-10 03:54:41,061 Sleeping for 9s. Reason: RUNNING 2024-12-10 03:54:50,333 Sleeping for 5s. Reason: RUNNING 2024-12-10 03:54:55,592 Sleeping for 7s. Reason: RUNNING 2024-12-10 03:55:02,849 Sleeping for 7s. Reason: RUNNING 2024-12-10 03:55:10,103 Sleeping for 6s. Reason: RUNNING 2024-12-10 03:55:16,364 Sleeping for 10s. Reason: RUNNING 2024-12-10 03:55:26,633 Sleeping for 9s. Reason: RUNNING 2024-12-10 03:55:37,730 Sleeping for 10s. Reason: PENDING 2024-12-10 03:55:47,986 Sleeping for 5s. Reason: RUNNING 2024-12-10 03:55:53,250 Sleeping for 6s. Reason: RUNNING 2024-12-10 03:55:59,511 Sleeping for 10s. Reason: RUNNING 2024-12-10 03:56:09,779 Sleeping for 5s. Reason: RUNNING 2024-12-10 03:56:15,032 Sleeping for 8s. Reason: RUNNING 2024-12-10 03:56:23,292 Sleeping for 7s. Reason: RUNNING 2024-12-10 03:56:30,551 Sleeping for 10s. Reason: RUNNING 2024-12-10 03:56:40,813 Sleeping for 7s. Reason: RUNNING 2024-12-10 03:56:48,068 Sleeping for 8s. Reason: RUNNING 2024-12-10 03:56:56,330 Sleeping for 6s. Reason: RUNNING 2024-12-10 03:57:02,585 Sleeping for 9s. Reason: RUNNING 2024-12-10 03:57:11,841 Sleeping for 9s. Reason: RUNNING 2024-12-10 03:57:21,101 Sleeping for 6s. Reason: RUNNING 2024-12-10 03:57:27,361 Sleeping for 6s. Reason: RUNNING 2024-12-10 03:57:38,461 Setting max_seq=508, max_extra_seq=2048 2024-12-10 04:01:03,585 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=66.2 pTM=0.638 ipTM=0.253 2024-12-10 04:01:50,253 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=67.4 pTM=0.644 ipTM=0.206 tol=9.19 2024-12-10 04:02:37,031 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=67.9 pTM=0.662 ipTM=0.31 tol=3.4 2024-12-10 04:03:23,954 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=68.5 pTM=0.666 ipTM=0.347 tol=2.57 2024-12-10 04:04:10,896 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=68.2 pTM=0.664 ipTM=0.299 tol=2.91 2024-12-10 04:04:57,867 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=68.5 pTM=0.664 ipTM=0.277 tol=1.13 2024-12-10 04:05:44,869 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=68.7 pTM=0.667 ipTM=0.308 tol=1.75 2024-12-10 04:06:31,898 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=68.8 pTM=0.669 ipTM=0.325 tol=1.23 2024-12-10 04:07:18,956 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=68.8 pTM=0.667 ipTM=0.308 tol=1.37 2024-12-10 04:08:05,982 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=68.9 pTM=0.668 ipTM=0.299 tol=2.71 2024-12-10 04:08:53,022 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=68.9 pTM=0.665 ipTM=0.273 tol=4.41 2024-12-10 04:09:39,991 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=68.9 pTM=0.667 ipTM=0.28 tol=3.84 2024-12-10 04:10:26,982 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=68.8 pTM=0.665 ipTM=0.272 tol=1.72 2024-12-10 04:11:14,011 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=69 pTM=0.667 ipTM=0.28 tol=3.84 2024-12-10 04:12:01,015 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=69 pTM=0.663 ipTM=0.271 tol=2.27 2024-12-10 04:12:48,031 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=68.9 pTM=0.666 ipTM=0.285 tol=1.41 2024-12-10 04:13:35,083 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=68.9 pTM=0.666 ipTM=0.29 tol=2.68 2024-12-10 04:14:22,095 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=69 pTM=0.668 ipTM=0.288 tol=1.76 2024-12-10 04:15:09,135 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=68.9 pTM=0.667 ipTM=0.303 tol=2.33 2024-12-10 04:15:56,168 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=69.1 pTM=0.668 ipTM=0.311 tol=1.82 2024-12-10 04:16:43,228 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=68.7 pTM=0.665 ipTM=0.294 tol=1.44 2024-12-10 04:17:30,317 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=68.9 pTM=0.664 ipTM=0.267 tol=4.17 2024-12-10 04:18:17,399 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=68.7 pTM=0.66 ipTM=0.256 tol=2 2024-12-10 04:19:04,455 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=68.9 pTM=0.663 ipTM=0.244 tol=3.99 2024-12-10 04:19:51,517 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=68.7 pTM=0.659 ipTM=0.245 tol=0.856 2024-12-10 04:20:38,591 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=68.7 pTM=0.662 ipTM=0.257 tol=0.828 2024-12-10 04:21:25,672 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=68.8 pTM=0.658 ipTM=0.241 tol=1.87 2024-12-10 04:22:12,752 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=68.6 pTM=0.659 ipTM=0.238 tol=1.45 2024-12-10 04:22:59,820 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=68.8 pTM=0.658 ipTM=0.25 tol=2.24 2024-12-10 04:23:46,882 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=68.7 pTM=0.664 ipTM=0.264 tol=1.11 2024-12-10 04:24:33,929 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=68.8 pTM=0.661 ipTM=0.257 tol=2.63 2024-12-10 04:24:33,931 alphafold2_multimer_v3_model_1_seed_000 took 1610.4s (30 recycles) 2024-12-10 04:25:22,021 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=65.4 pTM=0.638 ipTM=0.231 2024-12-10 04:26:09,157 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=65.8 pTM=0.638 ipTM=0.235 tol=9.77 2024-12-10 04:26:56,303 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=66.2 pTM=0.641 ipTM=0.221 tol=4.46 2024-12-10 04:27:43,460 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=66.8 pTM=0.649 ipTM=0.239 tol=3.36 2024-12-10 04:28:30,595 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=67.3 pTM=0.659 ipTM=0.291 tol=2.76 2024-12-10 04:29:17,750 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=67.9 pTM=0.666 ipTM=0.372 tol=1.62 2024-12-10 04:30:04,899 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=67.9 pTM=0.667 ipTM=0.387 tol=1.18 2024-12-10 04:30:52,040 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=68.1 pTM=0.67 ipTM=0.403 tol=1.21 2024-12-10 04:31:39,194 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=68 pTM=0.67 ipTM=0.426 tol=1.88 2024-12-10 04:32:26,358 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=68.2 pTM=0.672 ipTM=0.432 tol=1.21 2024-12-10 04:33:13,526 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=68.2 pTM=0.672 ipTM=0.442 tol=0.794 2024-12-10 04:34:00,672 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=68.2 pTM=0.675 ipTM=0.445 tol=1.33 2024-12-10 04:34:47,800 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=67.7 pTM=0.672 ipTM=0.441 tol=0.639 2024-12-10 04:35:34,950 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=68.1 pTM=0.675 ipTM=0.452 tol=0.828 2024-12-10 04:36:22,081 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=68.2 pTM=0.675 ipTM=0.448 tol=1.17 2024-12-10 04:37:09,155 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=68 pTM=0.676 ipTM=0.444 tol=1.68 2024-12-10 04:37:56,228 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=67.9 pTM=0.674 ipTM=0.458 tol=1.18 2024-12-10 04:38:43,288 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=67.9 pTM=0.673 ipTM=0.451 tol=0.774 2024-12-10 04:39:30,406 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=67.9 pTM=0.674 ipTM=0.455 tol=0.979 2024-12-10 04:40:17,514 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=67.9 pTM=0.675 ipTM=0.459 tol=1.29 2024-12-10 04:41:04,607 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=67.9 pTM=0.677 ipTM=0.465 tol=1.49 2024-12-10 04:41:51,742 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=67.9 pTM=0.676 ipTM=0.429 tol=1.7 2024-12-10 04:42:38,849 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=67.8 pTM=0.674 ipTM=0.436 tol=0.854 2024-12-10 04:43:25,974 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=67.9 pTM=0.675 ipTM=0.425 tol=1.47 2024-12-10 04:44:13,086 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=68.1 pTM=0.677 ipTM=0.42 tol=1.74 2024-12-10 04:45:00,191 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=67.8 pTM=0.676 ipTM=0.426 tol=1.6 2024-12-10 04:45:47,301 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=67.8 pTM=0.673 ipTM=0.417 tol=1.99 2024-12-10 04:46:34,401 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=67.7 pTM=0.672 ipTM=0.369 tol=2.35 2024-12-10 04:47:21,524 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=67.6 pTM=0.671 ipTM=0.366 tol=2.13 2024-12-10 04:48:08,647 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=67.6 pTM=0.673 ipTM=0.379 tol=1.53 2024-12-10 04:48:55,752 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=67.7 pTM=0.673 ipTM=0.407 tol=1.56 2024-12-10 04:48:55,753 alphafold2_multimer_v3_model_2_seed_000 took 1460.8s (30 recycles) 2024-12-10 04:49:43,911 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=66.1 pTM=0.624 ipTM=0.194 2024-12-10 04:50:31,017 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=66.1 pTM=0.632 ipTM=0.209 tol=6.95 2024-12-10 04:51:18,146 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=66 pTM=0.634 ipTM=0.217 tol=4.57 2024-12-10 04:52:05,322 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=65.9 pTM=0.632 ipTM=0.206 tol=3.48 2024-12-10 04:52:52,517 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=66 pTM=0.637 ipTM=0.212 tol=4.3 2024-12-10 04:53:39,682 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=66.1 pTM=0.636 ipTM=0.214 tol=3.68 2024-12-10 04:54:26,854 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=66.2 pTM=0.636 ipTM=0.206 tol=3.64 2024-12-10 04:55:14,055 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=66.2 pTM=0.637 ipTM=0.208 tol=3.58 2024-12-10 04:56:01,247 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=66.3 pTM=0.638 ipTM=0.208 tol=3.81 2024-12-10 04:56:48,420 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=66.2 pTM=0.637 ipTM=0.209 tol=3.9 2024-12-10 04:57:35,581 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=66.2 pTM=0.635 ipTM=0.206 tol=2.8 2024-12-10 04:58:22,716 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=66.2 pTM=0.637 ipTM=0.21 tol=1.74 2024-12-10 04:59:09,908 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=66.2 pTM=0.637 ipTM=0.212 tol=1.58 2024-12-10 04:59:57,093 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=66.2 pTM=0.636 ipTM=0.207 tol=1.72 2024-12-10 05:00:44,242 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=66.2 pTM=0.635 ipTM=0.204 tol=1.03 2024-12-10 05:01:31,396 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=65.9 pTM=0.632 ipTM=0.201 tol=1.29 2024-12-10 05:02:18,531 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=65.8 pTM=0.638 ipTM=0.214 tol=1.48 2024-12-10 05:03:05,692 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=66.1 pTM=0.637 ipTM=0.208 tol=1.27 2024-12-10 05:03:52,859 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=66.1 pTM=0.637 ipTM=0.208 tol=1.26 2024-12-10 05:04:40,013 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=66.2 pTM=0.638 ipTM=0.206 tol=1.48 2024-12-10 05:05:27,166 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=66.4 pTM=0.643 ipTM=0.216 tol=1.39 2024-12-10 05:06:14,268 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=66.4 pTM=0.642 ipTM=0.209 tol=1.2 2024-12-10 05:07:01,374 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=66.3 pTM=0.643 ipTM=0.213 tol=1.42 2024-12-10 05:07:48,489 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=66.4 pTM=0.643 ipTM=0.212 tol=1.37 2024-12-10 05:08:35,616 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=66.4 pTM=0.642 ipTM=0.211 tol=1.51 2024-12-10 05:09:22,742 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=66.4 pTM=0.646 ipTM=0.219 tol=1.54 2024-12-10 05:10:09,885 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=66.5 pTM=0.646 ipTM=0.217 tol=1.92 2024-12-10 05:10:57,038 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=66.3 pTM=0.641 ipTM=0.209 tol=1.18 2024-12-10 05:11:44,199 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=66.4 pTM=0.641 ipTM=0.206 tol=0.973 2024-12-10 05:12:31,348 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=66.3 pTM=0.644 ipTM=0.213 tol=1 2024-12-10 05:13:18,497 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=66.4 pTM=0.643 ipTM=0.211 tol=0.962 2024-12-10 05:13:18,498 alphafold2_multimer_v3_model_3_seed_000 took 1461.7s (30 recycles) 2024-12-10 05:14:06,644 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=65.3 pTM=0.625 ipTM=0.194 2024-12-10 05:14:53,810 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=66.6 pTM=0.637 ipTM=0.197 tol=7.23 2024-12-10 05:15:41,008 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=67.2 pTM=0.64 ipTM=0.206 tol=4.8 2024-12-10 05:16:28,209 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=67.6 pTM=0.645 ipTM=0.216 tol=3.67 2024-12-10 05:17:15,393 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=67.6 pTM=0.647 ipTM=0.216 tol=1.6 2024-12-10 05:18:02,563 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=68.1 pTM=0.653 ipTM=0.223 tol=3.76 2024-12-10 05:18:49,753 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=68.2 pTM=0.653 ipTM=0.22 tol=3.78 2024-12-10 05:19:36,943 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=68.4 pTM=0.656 ipTM=0.222 tol=1.21 2024-12-10 05:20:24,113 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=68.2 pTM=0.656 ipTM=0.218 tol=0.95 2024-12-10 05:21:11,291 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=68.2 pTM=0.658 ipTM=0.224 tol=0.757 2024-12-10 05:21:58,481 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=68.2 pTM=0.658 ipTM=0.223 tol=3.64 2024-12-10 05:22:45,703 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=68.1 pTM=0.659 ipTM=0.224 tol=2.09 2024-12-10 05:23:32,904 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=68.1 pTM=0.66 ipTM=0.225 tol=2.8 2024-12-10 05:24:20,083 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=68.3 pTM=0.662 ipTM=0.23 tol=2.49 2024-12-10 05:25:07,262 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=67.9 pTM=0.657 ipTM=0.224 tol=3.65 2024-12-10 05:25:54,443 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=67.9 pTM=0.655 ipTM=0.223 tol=2.45 2024-12-10 05:26:41,660 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=67.9 pTM=0.658 ipTM=0.227 tol=1.81 2024-12-10 05:27:28,871 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=68.1 pTM=0.656 ipTM=0.221 tol=1.03 2024-12-10 05:28:16,081 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=67.9 pTM=0.657 ipTM=0.224 tol=1.16 2024-12-10 05:29:03,290 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=68.1 pTM=0.657 ipTM=0.221 tol=0.77 2024-12-10 05:29:50,488 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=67.9 pTM=0.657 ipTM=0.224 tol=1.24 2024-12-10 05:30:37,699 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=68 pTM=0.655 ipTM=0.22 tol=2.95 2024-12-10 05:31:24,902 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=68.1 pTM=0.656 ipTM=0.221 tol=1.49 2024-12-10 05:32:12,094 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=68.1 pTM=0.657 ipTM=0.222 tol=2.8 2024-12-10 05:32:59,276 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=68.3 pTM=0.657 ipTM=0.223 tol=2.53 2024-12-10 05:33:46,448 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=68.1 pTM=0.659 ipTM=0.223 tol=1.03 2024-12-10 05:34:33,629 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=68.2 pTM=0.659 ipTM=0.226 tol=1.6 2024-12-10 05:35:20,798 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=68.1 pTM=0.658 ipTM=0.225 tol=0.956 2024-12-10 05:36:08,014 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=68.2 pTM=0.659 ipTM=0.224 tol=1.29 2024-12-10 05:36:55,210 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=68.1 pTM=0.658 ipTM=0.225 tol=1.59 2024-12-10 05:37:42,407 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=68.1 pTM=0.657 ipTM=0.224 tol=1.27 2024-12-10 05:37:42,408 alphafold2_multimer_v3_model_4_seed_000 took 1462.8s (30 recycles) 2024-12-10 05:38:30,474 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=64.1 pTM=0.626 ipTM=0.247 2024-12-10 05:39:17,591 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=64.9 pTM=0.63 ipTM=0.215 tol=9.88 2024-12-10 05:40:04,707 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=65.2 pTM=0.63 ipTM=0.213 tol=6.18 2024-12-10 05:40:51,853 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=65.6 pTM=0.631 ipTM=0.215 tol=3.17 2024-12-10 05:41:38,992 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=65.6 pTM=0.634 ipTM=0.205 tol=6.5 2024-12-10 05:42:26,140 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=65.7 pTM=0.633 ipTM=0.206 tol=3.39 2024-12-10 05:43:13,291 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=65.9 pTM=0.636 ipTM=0.205 tol=3.75 2024-12-10 05:44:00,463 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=66 pTM=0.636 ipTM=0.229 tol=4.42 2024-12-10 05:44:47,617 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=66.2 pTM=0.638 ipTM=0.228 tol=3.95 2024-12-10 05:45:34,795 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=66.1 pTM=0.639 ipTM=0.243 tol=1.59 2024-12-10 05:46:21,966 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=66.2 pTM=0.641 ipTM=0.24 tol=3.27 2024-12-10 05:47:09,161 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=66.2 pTM=0.642 ipTM=0.246 tol=1.52 2024-12-10 05:47:56,334 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=66 pTM=0.642 ipTM=0.241 tol=3.51 2024-12-10 05:48:43,502 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=66.2 pTM=0.643 ipTM=0.254 tol=3.46 2024-12-10 05:49:30,681 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=66 pTM=0.641 ipTM=0.24 tol=1.54 2024-12-10 05:50:17,866 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=66 pTM=0.641 ipTM=0.249 tol=3.85 2024-12-10 05:51:05,046 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=65.9 pTM=0.643 ipTM=0.248 tol=1.04 2024-12-10 05:51:52,232 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=66.2 pTM=0.644 ipTM=0.256 tol=3.4 2024-12-10 05:52:39,389 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=66.1 pTM=0.646 ipTM=0.256 tol=3.36 2024-12-10 05:53:26,512 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=66.5 pTM=0.648 ipTM=0.254 tol=0.985 2024-12-10 05:54:13,628 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=66.1 pTM=0.648 ipTM=0.247 tol=2.75 2024-12-10 05:55:00,747 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=66.4 pTM=0.648 ipTM=0.247 tol=2.4 2024-12-10 05:55:47,892 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=66.1 pTM=0.648 ipTM=0.248 tol=1.3 2024-12-10 05:56:35,031 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=66.4 pTM=0.649 ipTM=0.244 tol=2.7 2024-12-10 05:57:22,183 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=66.5 pTM=0.65 ipTM=0.248 tol=1.44 2024-12-10 05:58:09,355 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=66.6 pTM=0.652 ipTM=0.257 tol=3.37 2024-12-10 05:58:56,509 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=66.5 pTM=0.648 ipTM=0.248 tol=3.13 2024-12-10 05:59:43,668 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=66.4 pTM=0.647 ipTM=0.247 tol=1.16 2024-12-10 06:00:30,811 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=66.4 pTM=0.65 ipTM=0.245 tol=2.92 2024-12-10 06:01:17,936 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=66.6 pTM=0.65 ipTM=0.258 tol=3.24 2024-12-10 06:02:05,006 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=66.6 pTM=0.652 ipTM=0.258 tol=1.29 2024-12-10 06:02:05,007 alphafold2_multimer_v3_model_5_seed_000 took 1461.5s (30 recycles) 2024-12-10 06:02:06,076 reranking models by 'multimer' metric 2024-12-10 06:02:07,459 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-12-10 06:03:59,592 Relaxation took 113.5s 2024-12-10 06:03:59,592 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=67.7 pTM=0.673 ipTM=0.407 2024-12-10 06:05:46,069 Relaxation took 106.5s 2024-12-10 06:05:46,069 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=68.8 pTM=0.661 ipTM=0.257 2024-12-10 06:07:59,253 Relaxation took 133.2s 2024-12-10 06:07:59,253 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=66.6 pTM=0.652 ipTM=0.258 2024-12-10 06:10:14,452 Relaxation took 135.2s 2024-12-10 06:10:14,452 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=68.1 pTM=0.657 ipTM=0.224 2024-12-10 06:12:12,663 Relaxation took 118.2s 2024-12-10 06:12:12,663 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=66.4 pTM=0.643 ipTM=0.211 2024-12-10 06:12:15,319 Done