2024-12-10 04:14:45,724 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-12-10 04:14:47,262 Running on GPU 2024-12-10 04:14:52,176 Found 6 citations for tools or databases 2024-12-10 04:14:52,176 Query 1/1: ZNRF4_C1orf43 (length 682) 2024-12-10 04:14:52,491 Sleeping for 8s. Reason: PENDING 2024-12-10 04:15:00,753 Sleeping for 6s. Reason: RUNNING 2024-12-10 04:15:07,012 Sleeping for 9s. Reason: RUNNING 2024-12-10 04:15:16,271 Sleeping for 6s. Reason: RUNNING 2024-12-10 04:15:22,535 Sleeping for 7s. Reason: RUNNING 2024-12-10 04:15:29,794 Sleeping for 9s. Reason: RUNNING 2024-12-10 04:15:39,052 Sleeping for 6s. Reason: RUNNING 2024-12-10 04:15:45,317 Sleeping for 5s. Reason: RUNNING 2024-12-10 04:15:50,570 Sleeping for 6s. Reason: RUNNING 2024-12-10 04:15:56,824 Sleeping for 9s. Reason: RUNNING 2024-12-10 04:16:06,088 Sleeping for 6s. Reason: RUNNING 2024-12-10 04:16:12,345 Sleeping for 10s. Reason: RUNNING 2024-12-10 04:16:22,615 Sleeping for 10s. Reason: RUNNING 2024-12-10 04:16:34,443 Sleeping for 8s. Reason: PENDING 2024-12-10 04:16:42,712 Sleeping for 9s. Reason: RUNNING 2024-12-10 04:16:51,974 Sleeping for 7s. Reason: RUNNING 2024-12-10 04:16:59,235 Sleeping for 7s. Reason: RUNNING 2024-12-10 04:17:06,522 Sleeping for 7s. Reason: RUNNING 2024-12-10 04:17:17,433 Setting max_seq=508, max_extra_seq=2048 2024-12-10 04:21:13,044 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=52.7 pTM=0.287 ipTM=0.151 2024-12-10 04:21:25,666 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=54.6 pTM=0.297 ipTM=0.163 tol=11.6 2024-12-10 04:21:38,288 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=54.9 pTM=0.294 ipTM=0.16 tol=5.39 2024-12-10 04:21:50,922 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=54.6 pTM=0.292 ipTM=0.16 tol=4.62 2024-12-10 04:22:03,566 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=55 pTM=0.294 ipTM=0.165 tol=2.85 2024-12-10 04:22:16,207 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=54.9 pTM=0.295 ipTM=0.165 tol=3.56 2024-12-10 04:22:28,855 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=55.2 pTM=0.296 ipTM=0.165 tol=1.58 2024-12-10 04:22:41,508 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=55 pTM=0.297 ipTM=0.166 tol=2.63 2024-12-10 04:22:54,169 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=55 pTM=0.297 ipTM=0.164 tol=2.74 2024-12-10 04:23:06,826 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=54.9 pTM=0.296 ipTM=0.164 tol=3.14 2024-12-10 04:23:19,476 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=54.9 pTM=0.297 ipTM=0.165 tol=2.06 2024-12-10 04:23:32,134 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=55.1 pTM=0.298 ipTM=0.166 tol=2.69 2024-12-10 04:23:44,794 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=55 pTM=0.299 ipTM=0.167 tol=1.8 2024-12-10 04:23:57,463 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=55.2 pTM=0.297 ipTM=0.165 tol=3.42 2024-12-10 04:24:10,134 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=55.2 pTM=0.298 ipTM=0.165 tol=2.49 2024-12-10 04:24:22,804 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=55.1 pTM=0.298 ipTM=0.165 tol=2.31 2024-12-10 04:24:35,471 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=54.9 pTM=0.297 ipTM=0.165 tol=2.19 2024-12-10 04:24:48,137 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=54.9 pTM=0.298 ipTM=0.164 tol=3.51 2024-12-10 04:25:00,811 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=55 pTM=0.297 ipTM=0.166 tol=1.41 2024-12-10 04:25:13,477 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=54.9 pTM=0.297 ipTM=0.164 tol=2.91 2024-12-10 04:25:26,148 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=54.9 pTM=0.297 ipTM=0.167 tol=2.31 2024-12-10 04:25:38,816 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=55 pTM=0.299 ipTM=0.166 tol=2.68 2024-12-10 04:25:51,489 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=54.9 pTM=0.299 ipTM=0.166 tol=2.94 2024-12-10 04:26:04,160 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=54.8 pTM=0.298 ipTM=0.164 tol=2.37 2024-12-10 04:26:16,835 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=55.1 pTM=0.299 ipTM=0.166 tol=3.66 2024-12-10 04:26:29,503 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=55.2 pTM=0.297 ipTM=0.165 tol=4 2024-12-10 04:26:42,177 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=54.9 pTM=0.296 ipTM=0.163 tol=3.41 2024-12-10 04:26:54,845 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=55 pTM=0.295 ipTM=0.165 tol=1.62 2024-12-10 04:27:07,516 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=55 pTM=0.295 ipTM=0.162 tol=3.03 2024-12-10 04:27:20,181 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=55.3 pTM=0.296 ipTM=0.164 tol=3.64 2024-12-10 04:27:32,853 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=55 pTM=0.297 ipTM=0.165 tol=3.07 2024-12-10 04:27:32,854 alphafold2_multimer_v3_model_1_seed_000 took 594.1s (30 recycles) 2024-12-10 04:27:45,961 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=51.9 pTM=0.293 ipTM=0.218 2024-12-10 04:27:58,647 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=53.3 pTM=0.299 ipTM=0.204 tol=9.65 2024-12-10 04:28:11,340 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=53.9 pTM=0.299 ipTM=0.161 tol=4.66 2024-12-10 04:28:24,030 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=54.4 pTM=0.298 ipTM=0.157 tol=5.23 2024-12-10 04:28:36,732 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=54.4 pTM=0.3 ipTM=0.156 tol=2.74 2024-12-10 04:28:49,431 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=54.3 pTM=0.299 ipTM=0.156 tol=1.97 2024-12-10 04:29:02,130 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=54.2 pTM=0.299 ipTM=0.157 tol=1.96 2024-12-10 04:29:14,836 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=54.3 pTM=0.3 ipTM=0.158 tol=2.19 2024-12-10 04:29:27,541 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=54.3 pTM=0.299 ipTM=0.156 tol=1.94 2024-12-10 04:29:40,248 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=54.2 pTM=0.299 ipTM=0.157 tol=1.51 2024-12-10 04:29:52,945 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=54.2 pTM=0.3 ipTM=0.158 tol=2.22 2024-12-10 04:30:05,652 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=54.3 pTM=0.3 ipTM=0.158 tol=1.86 2024-12-10 04:30:18,354 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=54.3 pTM=0.301 ipTM=0.16 tol=1.44 2024-12-10 04:30:31,059 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=54.2 pTM=0.3 ipTM=0.159 tol=1.36 2024-12-10 04:30:43,763 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=54.4 pTM=0.3 ipTM=0.157 tol=1.9 2024-12-10 04:30:56,467 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=54.2 pTM=0.298 ipTM=0.158 tol=1.12 2024-12-10 04:31:09,173 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=54 pTM=0.298 ipTM=0.154 tol=1.81 2024-12-10 04:31:21,873 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=54.2 pTM=0.299 ipTM=0.157 tol=1.84 2024-12-10 04:31:34,580 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=54.3 pTM=0.299 ipTM=0.158 tol=1.62 2024-12-10 04:31:47,286 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=53.9 pTM=0.298 ipTM=0.157 tol=2.08 2024-12-10 04:31:59,986 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=54.1 pTM=0.299 ipTM=0.158 tol=2.75 2024-12-10 04:32:12,690 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=54.2 pTM=0.3 ipTM=0.158 tol=1.76 2024-12-10 04:32:25,384 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=54.2 pTM=0.299 ipTM=0.158 tol=1.8 2024-12-10 04:32:38,088 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=54.2 pTM=0.299 ipTM=0.159 tol=1.56 2024-12-10 04:32:50,787 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=54.3 pTM=0.299 ipTM=0.161 tol=1.35 2024-12-10 04:33:03,494 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=54.4 pTM=0.299 ipTM=0.158 tol=1.93 2024-12-10 04:33:16,196 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=54.2 pTM=0.299 ipTM=0.156 tol=2.43 2024-12-10 04:33:28,900 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=54.3 pTM=0.298 ipTM=0.154 tol=1.64 2024-12-10 04:33:41,594 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=54.2 pTM=0.298 ipTM=0.155 tol=1.81 2024-12-10 04:33:54,288 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=54.2 pTM=0.299 ipTM=0.155 tol=2.04 2024-12-10 04:34:06,981 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=54.3 pTM=0.299 ipTM=0.156 tol=2.37 2024-12-10 04:34:06,981 alphafold2_multimer_v3_model_2_seed_000 took 393.7s (30 recycles) 2024-12-10 04:34:20,152 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=52.5 pTM=0.294 ipTM=0.134 2024-12-10 04:34:32,874 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=53 pTM=0.294 ipTM=0.133 tol=11 2024-12-10 04:34:45,574 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=53.3 pTM=0.302 ipTM=0.132 tol=11.8 2024-12-10 04:34:58,262 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=53.6 pTM=0.33 ipTM=0.212 tol=8.55 2024-12-10 04:35:10,943 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=54.8 pTM=0.375 ipTM=0.319 tol=6.64 2024-12-10 04:35:23,623 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=55.8 pTM=0.386 ipTM=0.34 tol=4.51 2024-12-10 04:35:36,305 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=56.2 pTM=0.393 ipTM=0.359 tol=3.45 2024-12-10 04:35:48,987 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=56.2 pTM=0.396 ipTM=0.368 tol=2.43 2024-12-10 04:36:01,676 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=56.2 pTM=0.399 ipTM=0.378 tol=1.99 2024-12-10 04:36:14,363 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=56.6 pTM=0.4 ipTM=0.383 tol=3.17 2024-12-10 04:36:27,048 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=56.5 pTM=0.402 ipTM=0.388 tol=3.47 2024-12-10 04:36:39,723 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=56.6 pTM=0.405 ipTM=0.396 tol=2.29 2024-12-10 04:36:52,413 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=56.6 pTM=0.405 ipTM=0.393 tol=2.01 2024-12-10 04:37:05,093 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=56.7 pTM=0.406 ipTM=0.396 tol=1.78 2024-12-10 04:37:17,779 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=56.3 pTM=0.401 ipTM=0.383 tol=2.21 2024-12-10 04:37:30,465 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=56.5 pTM=0.404 ipTM=0.391 tol=2.29 2024-12-10 04:37:43,153 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=56.6 pTM=0.405 ipTM=0.392 tol=2.28 2024-12-10 04:37:55,843 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=56.7 pTM=0.404 ipTM=0.392 tol=1.84 2024-12-10 04:38:08,529 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=56.8 pTM=0.406 ipTM=0.396 tol=2.62 2024-12-10 04:38:21,218 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=56.8 pTM=0.407 ipTM=0.396 tol=2.22 2024-12-10 04:38:33,902 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=56.6 pTM=0.406 ipTM=0.393 tol=2.32 2024-12-10 04:38:46,590 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=56.6 pTM=0.404 ipTM=0.389 tol=2.34 2024-12-10 04:38:59,284 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=56.4 pTM=0.408 ipTM=0.396 tol=2.72 2024-12-10 04:39:11,976 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=56.6 pTM=0.406 ipTM=0.394 tol=3.24 2024-12-10 04:39:24,678 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=56.8 pTM=0.406 ipTM=0.398 tol=3.98 2024-12-10 04:39:37,382 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=56.8 pTM=0.408 ipTM=0.4 tol=3.65 2024-12-10 04:39:50,090 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=56.8 pTM=0.409 ipTM=0.404 tol=2.76 2024-12-10 04:40:02,792 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=56.8 pTM=0.407 ipTM=0.399 tol=4.07 2024-12-10 04:40:15,505 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=56.5 pTM=0.408 ipTM=0.4 tol=3.71 2024-12-10 04:40:28,214 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=56.6 pTM=0.41 ipTM=0.406 tol=3.31 2024-12-10 04:40:40,930 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=56.7 pTM=0.412 ipTM=0.412 tol=8.05 2024-12-10 04:40:40,931 alphafold2_multimer_v3_model_3_seed_000 took 393.5s (30 recycles) 2024-12-10 04:40:54,081 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=51.3 pTM=0.295 ipTM=0.171 2024-12-10 04:41:06,806 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=53.9 pTM=0.302 ipTM=0.159 tol=9.37 2024-12-10 04:41:19,523 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=54.8 pTM=0.303 ipTM=0.174 tol=8.49 2024-12-10 04:41:32,244 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=55.1 pTM=0.305 ipTM=0.174 tol=3.65 2024-12-10 04:41:44,955 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=55.6 pTM=0.308 ipTM=0.19 tol=2.46 2024-12-10 04:41:57,669 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=55.6 pTM=0.308 ipTM=0.182 tol=3.14 2024-12-10 04:42:10,372 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=56 pTM=0.311 ipTM=0.19 tol=3.51 2024-12-10 04:42:23,078 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=55.9 pTM=0.311 ipTM=0.193 tol=2.15 2024-12-10 04:42:35,780 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=55.2 pTM=0.312 ipTM=0.196 tol=9.25 2024-12-10 04:42:48,484 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=55.7 pTM=0.309 ipTM=0.185 tol=5.54 2024-12-10 04:43:01,179 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=55.5 pTM=0.312 ipTM=0.197 tol=5.91 2024-12-10 04:43:13,885 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=55.7 pTM=0.31 ipTM=0.192 tol=3.5 2024-12-10 04:43:26,583 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=55.9 pTM=0.312 ipTM=0.197 tol=1.98 2024-12-10 04:43:39,288 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=56 pTM=0.31 ipTM=0.189 tol=1.62 2024-12-10 04:43:51,987 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=56.1 pTM=0.312 ipTM=0.193 tol=1.66 2024-12-10 04:44:04,691 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=56.1 pTM=0.31 ipTM=0.187 tol=2.86 2024-12-10 04:44:17,392 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=55.9 pTM=0.309 ipTM=0.187 tol=2.39 2024-12-10 04:44:30,095 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=55.8 pTM=0.309 ipTM=0.183 tol=2.87 2024-12-10 04:44:42,802 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=55.8 pTM=0.309 ipTM=0.185 tol=2.88 2024-12-10 04:44:55,509 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=55.5 pTM=0.31 ipTM=0.186 tol=2.86 2024-12-10 04:45:08,207 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=55.7 pTM=0.31 ipTM=0.187 tol=2.88 2024-12-10 04:45:20,913 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=55.9 pTM=0.311 ipTM=0.183 tol=2.65 2024-12-10 04:45:33,611 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=55.8 pTM=0.311 ipTM=0.187 tol=1.6 2024-12-10 04:45:46,318 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=55.8 pTM=0.312 ipTM=0.186 tol=2.64 2024-12-10 04:45:59,017 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=55.9 pTM=0.311 ipTM=0.191 tol=1.82 2024-12-10 04:46:11,727 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=56.1 pTM=0.31 ipTM=0.184 tol=2.29 2024-12-10 04:46:24,427 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=55.6 pTM=0.311 ipTM=0.188 tol=3.61 2024-12-10 04:46:37,130 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=55.7 pTM=0.31 ipTM=0.188 tol=2.65 2024-12-10 04:46:49,835 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=55.8 pTM=0.311 ipTM=0.184 tol=2.18 2024-12-10 04:47:02,538 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=55.7 pTM=0.31 ipTM=0.18 tol=1.82 2024-12-10 04:47:15,242 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=55.7 pTM=0.311 ipTM=0.184 tol=2 2024-12-10 04:47:15,242 alphafold2_multimer_v3_model_4_seed_000 took 393.9s (30 recycles) 2024-12-10 04:47:28,424 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=50.2 pTM=0.288 ipTM=0.145 2024-12-10 04:47:41,170 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=52.6 pTM=0.292 ipTM=0.145 tol=11.7 2024-12-10 04:47:53,876 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=52.8 pTM=0.301 ipTM=0.148 tol=12.4 2024-12-10 04:48:06,578 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=53.1 pTM=0.348 ipTM=0.269 tol=10.7 2024-12-10 04:48:19,279 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=54.2 pTM=0.357 ipTM=0.285 tol=5.84 2024-12-10 04:48:31,967 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=55.2 pTM=0.379 ipTM=0.33 tol=5.35 2024-12-10 04:48:44,658 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=55.5 pTM=0.393 ipTM=0.362 tol=4.28 2024-12-10 04:48:57,353 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=55.5 pTM=0.393 ipTM=0.366 tol=3.1 2024-12-10 04:49:10,054 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=55.7 pTM=0.396 ipTM=0.374 tol=2.84 2024-12-10 04:49:22,752 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=56.2 pTM=0.398 ipTM=0.378 tol=2.6 2024-12-10 04:49:35,450 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=55.8 pTM=0.398 ipTM=0.379 tol=2.78 2024-12-10 04:49:48,146 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=56.2 pTM=0.402 ipTM=0.388 tol=5 2024-12-10 04:50:00,842 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=56.1 pTM=0.401 ipTM=0.387 tol=5.2 2024-12-10 04:50:13,538 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=56 pTM=0.398 ipTM=0.378 tol=4.8 2024-12-10 04:50:26,237 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=55.7 pTM=0.393 ipTM=0.366 tol=4.84 2024-12-10 04:50:38,929 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=56 pTM=0.4 ipTM=0.383 tol=5.2 2024-12-10 04:50:51,625 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=55.9 pTM=0.4 ipTM=0.385 tol=7.73 2024-12-10 04:51:04,314 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=56.1 pTM=0.399 ipTM=0.382 tol=4.15 2024-12-10 04:51:17,009 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=56 pTM=0.403 ipTM=0.391 tol=2.01 2024-12-10 04:51:29,700 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=56 pTM=0.401 ipTM=0.389 tol=3.03 2024-12-10 04:51:42,398 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=55.9 pTM=0.399 ipTM=0.382 tol=4.18 2024-12-10 04:51:55,092 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=55.9 pTM=0.396 ipTM=0.375 tol=5.48 2024-12-10 04:52:07,790 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=55.8 pTM=0.397 ipTM=0.377 tol=3.81 2024-12-10 04:52:20,482 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=56 pTM=0.398 ipTM=0.377 tol=6.04 2024-12-10 04:52:33,182 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=55.8 pTM=0.398 ipTM=0.378 tol=1.59 2024-12-10 04:52:45,867 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=56.1 pTM=0.398 ipTM=0.379 tol=1.79 2024-12-10 04:52:58,551 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=55.9 pTM=0.398 ipTM=0.378 tol=1.43 2024-12-10 04:53:11,241 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=56.1 pTM=0.394 ipTM=0.368 tol=1.63 2024-12-10 04:53:23,921 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=56 pTM=0.398 ipTM=0.376 tol=1.93 2024-12-10 04:53:36,606 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=56.2 pTM=0.397 ipTM=0.376 tol=1.7 2024-12-10 04:53:49,292 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=56 pTM=0.398 ipTM=0.378 tol=2.02 2024-12-10 04:53:49,293 alphafold2_multimer_v3_model_5_seed_000 took 393.6s (30 recycles) 2024-12-10 04:53:49,727 reranking models by 'multimer' metric 2024-12-10 04:53:53,732 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-12-10 04:54:55,644 Relaxation took 65.9s 2024-12-10 04:54:55,644 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=56.7 pTM=0.412 ipTM=0.412 2024-12-10 04:55:23,570 Relaxation took 27.9s 2024-12-10 04:55:23,570 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=56 pTM=0.398 ipTM=0.378 2024-12-10 04:56:25,510 Relaxation took 61.9s 2024-12-10 04:56:25,510 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=55.7 pTM=0.311 ipTM=0.184 2024-12-10 04:57:47,151 Relaxation took 81.6s 2024-12-10 04:57:47,152 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=55 pTM=0.297 ipTM=0.165 2024-12-10 04:58:38,453 Relaxation took 51.3s 2024-12-10 04:58:38,453 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=54.3 pTM=0.299 ipTM=0.156 2024-12-10 04:58:40,367 Done