2024-12-10 04:18:52,399 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-10 04:18:52,723 Running on GPU
2024-12-10 04:18:56,757 Found 6 citations for tools or databases
2024-12-10 04:18:56,757 Query 1/1: ZNRF4_CDKAL1 (length 1008)
2024-12-10 04:18:57,082 Sleeping for 8s. Reason: PENDING
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2024-12-10 04:22:18,852 Sleeping for 8s. Reason: RUNNING
2024-12-10 04:22:29,121 Sleeping for 6s. Reason: PENDING
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2024-12-10 04:22:47,894 Sleeping for 8s. Reason: RUNNING
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2024-12-10 04:23:06,425 Sleeping for 8s. Reason: RUNNING
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2024-12-10 04:23:22,951 Sleeping for 9s. Reason: RUNNING
2024-12-10 04:23:32,214 Sleeping for 10s. Reason: RUNNING
2024-12-10 04:23:42,477 Sleeping for 9s. Reason: RUNNING
2024-12-10 04:23:51,740 Sleeping for 10s. Reason: RUNNING
2024-12-10 04:24:02,002 Sleeping for 10s. Reason: RUNNING
2024-12-10 04:24:12,269 Sleeping for 5s. Reason: RUNNING
2024-12-10 04:24:17,526 Sleeping for 10s. Reason: RUNNING
2024-12-10 04:24:27,791 Sleeping for 7s. Reason: RUNNING
2024-12-10 04:24:35,060 Sleeping for 9s. Reason: RUNNING
2024-12-10 04:24:44,322 Sleeping for 5s. Reason: RUNNING
2024-12-10 04:24:49,580 Sleeping for 9s. Reason: RUNNING
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2024-12-10 04:25:05,111 Sleeping for 8s. Reason: RUNNING
2024-12-10 04:25:17,996 Setting max_seq=508, max_extra_seq=2048
2024-12-10 04:27:29,685 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=61.3 pTM=0.504 ipTM=0.172
2024-12-10 04:27:49,663 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=62.1 pTM=0.519 ipTM=0.248 tol=13.7
2024-12-10 04:28:09,702 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=61.3 pTM=0.508 ipTM=0.19 tol=6.71
2024-12-10 04:28:29,765 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=61.5 pTM=0.507 ipTM=0.181 tol=5.3
2024-12-10 04:28:49,861 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=61.6 pTM=0.509 ipTM=0.206 tol=3.66
2024-12-10 04:29:09,958 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=61.8 pTM=0.505 ipTM=0.17 tol=4.08
2024-12-10 04:29:30,078 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=61.8 pTM=0.509 ipTM=0.197 tol=3.5
2024-12-10 04:29:50,224 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=62.2 pTM=0.514 ipTM=0.333 tol=3.08
2024-12-10 04:30:10,338 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=62 pTM=0.52 ipTM=0.358 tol=2.82
2024-12-10 04:30:30,499 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=62.5 pTM=0.516 ipTM=0.254 tol=2.84
2024-12-10 04:30:50,702 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=62 pTM=0.515 ipTM=0.234 tol=2.24
2024-12-10 04:31:10,879 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=62 pTM=0.513 ipTM=0.25 tol=1.51
2024-12-10 04:31:31,077 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=61.7 pTM=0.51 ipTM=0.213 tol=2.32
2024-12-10 04:31:51,273 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=62.2 pTM=0.51 ipTM=0.197 tol=3.49
2024-12-10 04:32:11,445 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=62.1 pTM=0.513 ipTM=0.208 tol=1.84
2024-12-10 04:32:31,630 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=62.2 pTM=0.51 ipTM=0.186 tol=2.98
2024-12-10 04:32:51,802 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=62.2 pTM=0.519 ipTM=0.282 tol=2.93
2024-12-10 04:33:11,958 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=62.6 pTM=0.527 ipTM=0.273 tol=1.63
2024-12-10 04:33:32,133 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=62.4 pTM=0.521 ipTM=0.227 tol=2.82
2024-12-10 04:33:52,287 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=62 pTM=0.526 ipTM=0.235 tol=2.73
2024-12-10 04:34:12,472 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=62.5 pTM=0.536 ipTM=0.268 tol=3.34
2024-12-10 04:34:32,652 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=62.7 pTM=0.541 ipTM=0.299 tol=3.22
2024-12-10 04:34:52,829 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=62.5 pTM=0.536 ipTM=0.281 tol=3.56
2024-12-10 04:35:13,024 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=62.6 pTM=0.542 ipTM=0.307 tol=2.58
2024-12-10 04:35:33,172 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=62.8 pTM=0.548 ipTM=0.327 tol=3.03
2024-12-10 04:35:53,343 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=62.4 pTM=0.542 ipTM=0.302 tol=1.73
2024-12-10 04:36:13,531 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=62.4 pTM=0.542 ipTM=0.302 tol=1.59
2024-12-10 04:36:33,697 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=62.3 pTM=0.538 ipTM=0.29 tol=2.17
2024-12-10 04:36:53,883 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=62.2 pTM=0.539 ipTM=0.298 tol=2.05
2024-12-10 04:37:14,054 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=62.3 pTM=0.542 ipTM=0.304 tol=2.04
2024-12-10 04:37:34,182 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=62.7 pTM=0.546 ipTM=0.333 tol=1.47
2024-12-10 04:37:34,183 alphafold2_multimer_v3_model_1_seed_000 took 731.2s (30 recycles)
2024-12-10 04:37:54,993 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=62.1 pTM=0.52 ipTM=0.181
2024-12-10 04:38:15,196 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=61.9 pTM=0.517 ipTM=0.241 tol=11.9
2024-12-10 04:38:35,425 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=62.5 pTM=0.516 ipTM=0.183 tol=4.51
2024-12-10 04:38:55,676 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=62.6 pTM=0.515 ipTM=0.189 tol=5
2024-12-10 04:39:15,916 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=62.5 pTM=0.516 ipTM=0.18 tol=3.87
2024-12-10 04:39:36,161 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=62.8 pTM=0.514 ipTM=0.172 tol=3.02
2024-12-10 04:39:56,398 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=62.6 pTM=0.514 ipTM=0.164 tol=4.19
2024-12-10 04:40:16,626 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=62.7 pTM=0.512 ipTM=0.166 tol=2.93
2024-12-10 04:40:36,867 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=62.8 pTM=0.515 ipTM=0.194 tol=4.11
2024-12-10 04:40:57,079 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=63.2 pTM=0.513 ipTM=0.162 tol=4.09
2024-12-10 04:41:17,318 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=63 pTM=0.512 ipTM=0.161 tol=3.56
2024-12-10 04:41:37,570 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=63.6 pTM=0.516 ipTM=0.189 tol=5.31
2024-12-10 04:41:57,786 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=63.1 pTM=0.512 ipTM=0.162 tol=3.89
2024-12-10 04:42:18,033 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=63.1 pTM=0.516 ipTM=0.203 tol=3.51
2024-12-10 04:42:38,282 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=63.1 pTM=0.512 ipTM=0.162 tol=4.95
2024-12-10 04:42:58,521 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=63.2 pTM=0.511 ipTM=0.16 tol=2.72
2024-12-10 04:43:18,810 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=63.1 pTM=0.513 ipTM=0.181 tol=4.7
2024-12-10 04:43:39,099 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=63.4 pTM=0.514 ipTM=0.164 tol=4.81
2024-12-10 04:43:59,372 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=62.9 pTM=0.514 ipTM=0.165 tol=4.38
2024-12-10 04:44:19,653 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=63.4 pTM=0.512 ipTM=0.161 tol=4.71
2024-12-10 04:44:39,926 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=63.3 pTM=0.515 ipTM=0.171 tol=4.66
2024-12-10 04:45:00,196 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=63 pTM=0.517 ipTM=0.209 tol=4.24
2024-12-10 04:45:20,437 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=63 pTM=0.511 ipTM=0.165 tol=3.79
2024-12-10 04:45:40,681 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=62.9 pTM=0.516 ipTM=0.203 tol=6.66
2024-12-10 04:46:00,933 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=63.2 pTM=0.513 ipTM=0.178 tol=7.21
2024-12-10 04:46:21,196 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=63 pTM=0.515 ipTM=0.196 tol=5.86
2024-12-10 04:46:41,462 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=62.9 pTM=0.513 ipTM=0.172 tol=3.5
2024-12-10 04:47:01,733 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=63.4 pTM=0.512 ipTM=0.154 tol=4.55
2024-12-10 04:47:21,986 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=63.5 pTM=0.516 ipTM=0.22 tol=8.84
2024-12-10 04:47:42,260 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=63.5 pTM=0.511 ipTM=0.166 tol=5.86
2024-12-10 04:48:02,525 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=63 pTM=0.509 ipTM=0.161 tol=3.72
2024-12-10 04:48:02,525 alphafold2_multimer_v3_model_2_seed_000 took 627.7s (30 recycles)
2024-12-10 04:48:23,451 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=61.8 pTM=0.512 ipTM=0.233
2024-12-10 04:48:43,810 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=61.9 pTM=0.514 ipTM=0.176 tol=17.7
2024-12-10 04:49:04,179 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=61.9 pTM=0.516 ipTM=0.17 tol=10.2
2024-12-10 04:49:24,529 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=61.8 pTM=0.521 ipTM=0.172 tol=5.24
2024-12-10 04:49:44,940 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=62.2 pTM=0.523 ipTM=0.194 tol=5
2024-12-10 04:50:05,326 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=61.8 pTM=0.522 ipTM=0.187 tol=4.5
2024-12-10 04:50:25,755 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=62.3 pTM=0.522 ipTM=0.194 tol=3.72
2024-12-10 04:50:46,174 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=62 pTM=0.523 ipTM=0.2 tol=2.18
2024-12-10 04:51:06,570 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=62.1 pTM=0.521 ipTM=0.206 tol=3.41
2024-12-10 04:51:26,989 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=61.8 pTM=0.522 ipTM=0.196 tol=3.39
2024-12-10 04:51:47,428 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=61.9 pTM=0.521 ipTM=0.212 tol=2.68
2024-12-10 04:52:07,845 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=61.6 pTM=0.515 ipTM=0.217 tol=15.2
2024-12-10 04:52:28,280 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=61.2 pTM=0.517 ipTM=0.168 tol=14.5
2024-12-10 04:52:48,687 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=61.5 pTM=0.523 ipTM=0.171 tol=8.11
2024-12-10 04:53:09,099 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=61.4 pTM=0.522 ipTM=0.173 tol=5.67
2024-12-10 04:53:29,504 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=61.8 pTM=0.523 ipTM=0.283 tol=15.5
2024-12-10 04:53:49,918 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=61.5 pTM=0.512 ipTM=0.206 tol=6.83
2024-12-10 04:54:10,375 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=61.4 pTM=0.516 ipTM=0.161 tol=14.6
2024-12-10 04:54:30,802 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=61.7 pTM=0.519 ipTM=0.167 tol=7.9
2024-12-10 04:54:51,190 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=61.1 pTM=0.51 ipTM=0.156 tol=14.5
2024-12-10 04:55:11,641 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=61.3 pTM=0.519 ipTM=0.165 tol=12.3
2024-12-10 04:55:32,023 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=61.5 pTM=0.522 ipTM=0.187 tol=7.45
2024-12-10 04:55:52,433 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=61.3 pTM=0.519 ipTM=0.193 tol=7.66
2024-12-10 04:56:12,843 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=61.8 pTM=0.521 ipTM=0.184 tol=5.63
2024-12-10 04:56:33,267 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=61.9 pTM=0.521 ipTM=0.189 tol=4.36
2024-12-10 04:56:53,669 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=61.5 pTM=0.521 ipTM=0.191 tol=2.48
2024-12-10 04:57:14,055 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=61.8 pTM=0.523 ipTM=0.198 tol=2.69
2024-12-10 04:57:34,474 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=61.6 pTM=0.524 ipTM=0.187 tol=2.98
2024-12-10 04:57:54,859 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=61.6 pTM=0.521 ipTM=0.188 tol=2.9
2024-12-10 04:58:15,257 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=61.7 pTM=0.524 ipTM=0.191 tol=3.8
2024-12-10 04:58:35,657 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=61.8 pTM=0.52 ipTM=0.205 tol=3.37
2024-12-10 04:58:35,658 alphafold2_multimer_v3_model_3_seed_000 took 632.5s (30 recycles)
2024-12-10 04:58:56,546 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=60 pTM=0.534 ipTM=0.274
2024-12-10 04:59:16,927 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=61.1 pTM=0.537 ipTM=0.269 tol=15.8
2024-12-10 04:59:37,230 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=61.5 pTM=0.535 ipTM=0.265 tol=16.7
2024-12-10 04:59:57,605 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=60.7 pTM=0.515 ipTM=0.181 tol=9.47
2024-12-10 05:00:18,020 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=60.6 pTM=0.513 ipTM=0.166 tol=6.08
2024-12-10 05:00:38,381 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=61.6 pTM=0.516 ipTM=0.17 tol=10.5
2024-12-10 05:00:58,804 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=61.3 pTM=0.513 ipTM=0.162 tol=9.78
2024-12-10 05:01:19,211 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=61.9 pTM=0.516 ipTM=0.179 tol=6.67
2024-12-10 05:01:39,609 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=61.6 pTM=0.52 ipTM=0.226 tol=7.37
2024-12-10 05:01:59,993 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=62.2 pTM=0.521 ipTM=0.219 tol=6
2024-12-10 05:02:20,439 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=61.4 pTM=0.513 ipTM=0.171 tol=10.5
2024-12-10 05:02:40,821 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=61.6 pTM=0.518 ipTM=0.196 tol=7.68
2024-12-10 05:03:01,239 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=62 pTM=0.527 ipTM=0.264 tol=6.54
2024-12-10 05:03:21,617 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=62.6 pTM=0.526 ipTM=0.23 tol=5.85
2024-12-10 05:03:42,019 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=61.4 pTM=0.522 ipTM=0.193 tol=4.2
2024-12-10 05:04:02,408 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=62.8 pTM=0.529 ipTM=0.211 tol=4.6
2024-12-10 05:04:22,792 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=62.2 pTM=0.535 ipTM=0.286 tol=4.02
2024-12-10 05:04:43,145 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=62.9 pTM=0.533 ipTM=0.234 tol=5.03
2024-12-10 05:05:03,522 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=61.6 pTM=0.523 ipTM=0.185 tol=3.87
2024-12-10 05:05:23,872 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=63 pTM=0.538 ipTM=0.278 tol=3.96
2024-12-10 05:05:44,285 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=61.2 pTM=0.527 ipTM=0.238 tol=5.92
2024-12-10 05:06:04,661 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=62.2 pTM=0.533 ipTM=0.284 tol=5.83
2024-12-10 05:06:25,072 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=61.7 pTM=0.525 ipTM=0.194 tol=6.69
2024-12-10 05:06:45,457 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=61.3 pTM=0.519 ipTM=0.171 tol=5.85
2024-12-10 05:07:05,858 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=61.7 pTM=0.52 ipTM=0.171 tol=8.66
2024-12-10 05:07:26,244 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=60.9 pTM=0.517 ipTM=0.167 tol=8.32
2024-12-10 05:07:46,636 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=62.2 pTM=0.523 ipTM=0.199 tol=6.75
2024-12-10 05:08:07,032 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=62.5 pTM=0.521 ipTM=0.195 tol=6.21
2024-12-10 05:08:27,423 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=61.1 pTM=0.518 ipTM=0.164 tol=8.98
2024-12-10 05:08:47,779 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=62.7 pTM=0.531 ipTM=0.232 tol=5.54
2024-12-10 05:09:08,141 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=62.7 pTM=0.52 ipTM=0.183 tol=5.87
2024-12-10 05:09:08,142 alphafold2_multimer_v3_model_4_seed_000 took 631.9s (30 recycles)
2024-12-10 05:09:29,059 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=61.3 pTM=0.511 ipTM=0.214
2024-12-10 05:09:49,388 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=61.8 pTM=0.511 ipTM=0.174 tol=14.9
2024-12-10 05:10:09,721 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=62.2 pTM=0.51 ipTM=0.166 tol=6.67
2024-12-10 05:10:30,040 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=61.8 pTM=0.51 ipTM=0.171 tol=4.29
2024-12-10 05:10:50,396 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=62 pTM=0.51 ipTM=0.156 tol=3.99
2024-12-10 05:11:10,742 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=62 pTM=0.508 ipTM=0.158 tol=3.53
2024-12-10 05:11:31,101 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=62.2 pTM=0.509 ipTM=0.158 tol=2.6
2024-12-10 05:11:51,440 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=62.1 pTM=0.509 ipTM=0.159 tol=3.27
2024-12-10 05:12:11,800 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=62 pTM=0.51 ipTM=0.162 tol=3.46
2024-12-10 05:12:32,140 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=62.1 pTM=0.509 ipTM=0.162 tol=4.16
2024-12-10 05:12:52,512 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=62.1 pTM=0.508 ipTM=0.169 tol=3.77
2024-12-10 05:13:12,881 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=62.2 pTM=0.507 ipTM=0.163 tol=4.01
2024-12-10 05:13:33,236 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=62 pTM=0.507 ipTM=0.168 tol=4.84
2024-12-10 05:13:53,555 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=62 pTM=0.508 ipTM=0.168 tol=3
2024-12-10 05:14:13,888 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=62 pTM=0.508 ipTM=0.159 tol=4.21
2024-12-10 05:14:34,230 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=62 pTM=0.508 ipTM=0.163 tol=4.1
2024-12-10 05:14:54,562 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=62 pTM=0.507 ipTM=0.159 tol=3.29
2024-12-10 05:15:14,912 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=62 pTM=0.507 ipTM=0.166 tol=3.14
2024-12-10 05:15:35,273 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=62 pTM=0.505 ipTM=0.154 tol=3.84
2024-12-10 05:15:55,612 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=62 pTM=0.507 ipTM=0.162 tol=3.89
2024-12-10 05:16:16,000 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=62.1 pTM=0.507 ipTM=0.166 tol=4.27
2024-12-10 05:16:36,363 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=62.1 pTM=0.508 ipTM=0.168 tol=2.89
2024-12-10 05:16:56,720 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=61.9 pTM=0.507 ipTM=0.162 tol=2.7
2024-12-10 05:17:17,054 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=61.9 pTM=0.508 ipTM=0.167 tol=2.5
2024-12-10 05:17:37,430 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=62.2 pTM=0.507 ipTM=0.164 tol=3
2024-12-10 05:17:57,790 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=62 pTM=0.508 ipTM=0.166 tol=2.86
2024-12-10 05:18:18,181 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=62 pTM=0.506 ipTM=0.159 tol=3.21
2024-12-10 05:18:38,553 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=62.2 pTM=0.507 ipTM=0.164 tol=3.32
2024-12-10 05:18:58,973 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=62.1 pTM=0.508 ipTM=0.16 tol=5.11
2024-12-10 05:19:19,346 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=61.8 pTM=0.507 ipTM=0.16 tol=5.17
2024-12-10 05:19:39,719 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=61.9 pTM=0.508 ipTM=0.162 tol=4.25
2024-12-10 05:19:39,720 alphafold2_multimer_v3_model_5_seed_000 took 631.0s (30 recycles)
2024-12-10 05:19:40,347 reranking models by 'multimer' metric
2024-12-10 05:19:41,555 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-10 05:21:22,793 Relaxation took 102.4s
2024-12-10 05:21:22,793 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=62.7 pTM=0.546 ipTM=0.333
2024-12-10 05:23:30,262 Relaxation took 127.5s
2024-12-10 05:23:30,263 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=61.8 pTM=0.52 ipTM=0.205
2024-12-10 05:34:22,966 Relaxation took 652.7s
2024-12-10 05:34:22,966 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=62.7 pTM=0.52 ipTM=0.183
2024-12-10 05:35:38,485 Relaxation took 75.5s
2024-12-10 05:35:38,485 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=61.9 pTM=0.508 ipTM=0.162
2024-12-10 05:37:07,277 Relaxation took 88.8s
2024-12-10 05:37:07,277 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=63 pTM=0.509 ipTM=0.161
2024-12-10 05:37:09,321 Done