2024-12-10 05:09:42,894 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-10 05:09:43,207 Running on GPU
2024-12-10 05:09:46,730 Found 6 citations for tools or databases
2024-12-10 05:09:46,731 Query 1/1: ZNRF4_LEMD3 (length 1340)
2024-12-10 05:09:47,026 Sleeping for 10s. Reason: PENDING
2024-12-10 05:09:57,291 Sleeping for 5s. Reason: PENDING
2024-12-10 05:10:02,543 Sleeping for 6s. Reason: PENDING
2024-12-10 05:10:08,799 Sleeping for 9s. Reason: PENDING
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2024-12-10 05:10:28,318 Sleeping for 7s. Reason: PENDING
2024-12-10 05:10:35,579 Sleeping for 7s. Reason: PENDING
2024-12-10 05:10:42,836 Sleeping for 8s. Reason: PENDING
2024-12-10 05:10:51,091 Sleeping for 6s. Reason: PENDING
2024-12-10 05:10:57,350 Sleeping for 8s. Reason: PENDING
2024-12-10 05:11:05,604 Sleeping for 7s. Reason: PENDING
2024-12-10 05:11:12,863 Sleeping for 7s. Reason: PENDING
2024-12-10 05:11:20,123 Sleeping for 5s. Reason: RUNNING
2024-12-10 05:11:25,379 Sleeping for 6s. Reason: RUNNING
2024-12-10 05:11:31,633 Sleeping for 9s. Reason: RUNNING
2024-12-10 05:11:40,894 Sleeping for 8s. Reason: RUNNING
2024-12-10 05:11:49,162 Sleeping for 5s. Reason: RUNNING
2024-12-10 05:11:54,424 Sleeping for 5s. Reason: RUNNING
2024-12-10 05:11:59,680 Sleeping for 9s. Reason: RUNNING
2024-12-10 05:12:08,943 Sleeping for 5s. Reason: RUNNING
2024-12-10 05:12:14,205 Sleeping for 9s. Reason: RUNNING
2024-12-10 05:12:23,468 Sleeping for 5s. Reason: RUNNING
2024-12-10 05:12:28,728 Sleeping for 5s. Reason: RUNNING
2024-12-10 05:12:33,980 Sleeping for 10s. Reason: RUNNING
2024-12-10 05:12:44,255 Sleeping for 5s. Reason: RUNNING
2024-12-10 05:12:49,511 Sleeping for 10s. Reason: RUNNING
2024-12-10 05:12:59,781 Sleeping for 6s. Reason: RUNNING
2024-12-10 05:13:06,038 Sleeping for 6s. Reason: RUNNING
2024-12-10 05:13:12,297 Sleeping for 6s. Reason: RUNNING
2024-12-10 05:13:20,216 Sleeping for 5s. Reason: PENDING
2024-12-10 05:13:25,472 Sleeping for 10s. Reason: RUNNING
2024-12-10 05:13:35,728 Sleeping for 6s. Reason: RUNNING
2024-12-10 05:13:41,987 Sleeping for 6s. Reason: RUNNING
2024-12-10 05:13:48,247 Sleeping for 6s. Reason: RUNNING
2024-12-10 05:13:54,519 Sleeping for 6s. Reason: RUNNING
2024-12-10 05:14:00,778 Sleeping for 8s. Reason: RUNNING
2024-12-10 05:14:09,035 Sleeping for 5s. Reason: RUNNING
2024-12-10 05:14:14,292 Sleeping for 9s. Reason: RUNNING
2024-12-10 05:14:23,557 Sleeping for 8s. Reason: RUNNING
2024-12-10 05:14:31,814 Sleeping for 10s. Reason: RUNNING
2024-12-10 05:14:45,916 Setting max_seq=508, max_extra_seq=2048
2024-12-10 05:17:42,923 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=45.8 pTM=0.301 ipTM=0.207
2024-12-10 05:18:30,033 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=47.6 pTM=0.296 ipTM=0.23 tol=16.3
2024-12-10 05:19:17,279 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=47.1 pTM=0.308 ipTM=0.218 tol=12.9
2024-12-10 05:20:04,613 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=47.5 pTM=0.309 ipTM=0.219 tol=8.71
2024-12-10 05:20:52,026 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=47.8 pTM=0.313 ipTM=0.224 tol=9.8
2024-12-10 05:21:39,420 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=47.8 pTM=0.315 ipTM=0.226 tol=9.84
2024-12-10 05:22:26,843 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=47.9 pTM=0.317 ipTM=0.223 tol=6.91
2024-12-10 05:23:14,298 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=48.1 pTM=0.316 ipTM=0.225 tol=6.09
2024-12-10 05:24:01,782 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=48 pTM=0.317 ipTM=0.226 tol=6.39
2024-12-10 05:24:49,269 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=48.1 pTM=0.316 ipTM=0.224 tol=2.61
2024-12-10 05:25:36,760 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=48.2 pTM=0.317 ipTM=0.226 tol=5.77
2024-12-10 05:26:24,254 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=48 pTM=0.315 ipTM=0.222 tol=2.73
2024-12-10 05:27:11,711 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=48 pTM=0.317 ipTM=0.228 tol=5.91
2024-12-10 05:27:59,172 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=48.1 pTM=0.316 ipTM=0.226 tol=5.84
2024-12-10 05:28:46,604 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=48 pTM=0.316 ipTM=0.225 tol=6.08
2024-12-10 05:29:33,999 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=48 pTM=0.317 ipTM=0.227 tol=4.71
2024-12-10 05:30:21,452 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=48.1 pTM=0.315 ipTM=0.221 tol=3.6
2024-12-10 05:31:08,935 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=48 pTM=0.317 ipTM=0.226 tol=5.91
2024-12-10 05:31:56,395 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=48.1 pTM=0.317 ipTM=0.225 tol=4.16
2024-12-10 05:32:43,865 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=48 pTM=0.317 ipTM=0.225 tol=7.27
2024-12-10 05:33:31,331 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=47.9 pTM=0.317 ipTM=0.226 tol=3.39
2024-12-10 05:34:18,783 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=48.1 pTM=0.318 ipTM=0.228 tol=3.32
2024-12-10 05:35:06,229 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=48.1 pTM=0.318 ipTM=0.228 tol=3.48
2024-12-10 05:35:53,686 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=47.9 pTM=0.317 ipTM=0.226 tol=3.23
2024-12-10 05:36:41,146 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=48 pTM=0.32 ipTM=0.232 tol=2.86
2024-12-10 05:37:28,585 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=47.8 pTM=0.318 ipTM=0.23 tol=3.34
2024-12-10 05:38:16,023 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=47.9 pTM=0.319 ipTM=0.229 tol=7.02
2024-12-10 05:39:03,427 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=47.9 pTM=0.318 ipTM=0.229 tol=2.82
2024-12-10 05:39:50,841 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=48 pTM=0.317 ipTM=0.227 tol=8.22
2024-12-10 05:40:38,255 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=48 pTM=0.318 ipTM=0.227 tol=5.78
2024-12-10 05:41:25,658 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=48.1 pTM=0.318 ipTM=0.229 tol=3.69
2024-12-10 05:41:25,659 alphafold2_multimer_v3_model_1_seed_000 took 1594.9s (30 recycles)
2024-12-10 05:42:14,079 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=45.8 pTM=0.304 ipTM=0.228
2024-12-10 05:43:01,467 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=46.8 pTM=0.302 ipTM=0.227 tol=18.4
2024-12-10 05:43:48,822 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=46.9 pTM=0.312 ipTM=0.245 tol=8.76
2024-12-10 05:44:36,164 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=46.9 pTM=0.315 ipTM=0.247 tol=7.06
2024-12-10 05:45:23,552 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=47.3 pTM=0.314 ipTM=0.238 tol=4.84
2024-12-10 05:46:10,960 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=47.4 pTM=0.311 ipTM=0.235 tol=5.81
2024-12-10 05:46:58,377 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=47.7 pTM=0.312 ipTM=0.237 tol=3.42
2024-12-10 05:47:45,801 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=47.5 pTM=0.313 ipTM=0.239 tol=3.41
2024-12-10 05:48:33,194 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=47.5 pTM=0.312 ipTM=0.239 tol=3.82
2024-12-10 05:49:20,619 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=47.5 pTM=0.312 ipTM=0.24 tol=3.18
2024-12-10 05:50:08,045 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=47.5 pTM=0.31 ipTM=0.236 tol=3.03
2024-12-10 05:50:55,498 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=47.4 pTM=0.31 ipTM=0.239 tol=3.1
2024-12-10 05:51:42,957 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=47.3 pTM=0.313 ipTM=0.242 tol=3.29
2024-12-10 05:52:30,407 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=47.4 pTM=0.314 ipTM=0.243 tol=3.69
2024-12-10 05:53:17,864 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=47.3 pTM=0.312 ipTM=0.241 tol=3.42
2024-12-10 05:54:05,343 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=47.4 pTM=0.312 ipTM=0.241 tol=2.26
2024-12-10 05:54:52,803 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=47.4 pTM=0.312 ipTM=0.241 tol=2.44
2024-12-10 05:55:40,259 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=47.4 pTM=0.31 ipTM=0.235 tol=2.58
2024-12-10 05:56:27,722 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=47.5 pTM=0.31 ipTM=0.237 tol=3.24
2024-12-10 05:57:15,164 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=47.2 pTM=0.309 ipTM=0.236 tol=2.58
2024-12-10 05:58:02,627 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=47.3 pTM=0.311 ipTM=0.239 tol=4.83
2024-12-10 05:58:50,083 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=47.4 pTM=0.311 ipTM=0.24 tol=5.08
2024-12-10 05:59:37,531 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=47.3 pTM=0.311 ipTM=0.242 tol=7.24
2024-12-10 06:00:24,990 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=47.4 pTM=0.311 ipTM=0.242 tol=7.29
2024-12-10 06:01:12,425 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=47.5 pTM=0.312 ipTM=0.243 tol=6.04
2024-12-10 06:01:59,845 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=47.4 pTM=0.312 ipTM=0.245 tol=3.87
2024-12-10 06:02:47,292 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=47.4 pTM=0.311 ipTM=0.24 tol=3.52
2024-12-10 06:03:34,747 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=47.5 pTM=0.314 ipTM=0.247 tol=2.52
2024-12-10 06:04:22,200 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=47.3 pTM=0.313 ipTM=0.245 tol=3.07
2024-12-10 06:05:09,642 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=47.3 pTM=0.313 ipTM=0.243 tol=3.11
2024-12-10 06:05:57,078 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=47.5 pTM=0.312 ipTM=0.242 tol=3.22
2024-12-10 06:05:57,079 alphafold2_multimer_v3_model_2_seed_000 took 1470.3s (30 recycles)
2024-12-10 06:06:45,751 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=45.1 pTM=0.3 ipTM=0.21
2024-12-10 06:07:33,313 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=46.8 pTM=0.297 ipTM=0.216 tol=17.4
2024-12-10 06:08:20,853 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=47.1 pTM=0.31 ipTM=0.222 tol=11.9
2024-12-10 06:09:08,396 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=47.5 pTM=0.314 ipTM=0.226 tol=7.79
2024-12-10 06:09:55,951 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=47.1 pTM=0.313 ipTM=0.22 tol=10.8
2024-12-10 06:10:43,522 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=47.4 pTM=0.313 ipTM=0.22 tol=7
2024-12-10 06:11:31,086 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=47.4 pTM=0.313 ipTM=0.216 tol=6.23
2024-12-10 06:12:18,632 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=47.4 pTM=0.318 ipTM=0.219 tol=8.25
2024-12-10 06:13:06,203 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=47.3 pTM=0.318 ipTM=0.221 tol=8.88
2024-12-10 06:13:53,784 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=47.5 pTM=0.318 ipTM=0.22 tol=7.47
2024-12-10 06:14:41,351 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=47.4 pTM=0.323 ipTM=0.226 tol=9.53
2024-12-10 06:15:28,910 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=47.6 pTM=0.322 ipTM=0.224 tol=6.38
2024-12-10 06:16:16,465 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=47.5 pTM=0.325 ipTM=0.226 tol=9.53
2024-12-10 06:17:04,018 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=47.8 pTM=0.327 ipTM=0.233 tol=10.4
2024-12-10 06:17:51,575 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=47.6 pTM=0.325 ipTM=0.228 tol=9.19
2024-12-10 06:18:39,104 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=47.5 pTM=0.329 ipTM=0.236 tol=4.85
2024-12-10 06:19:26,630 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=47.5 pTM=0.33 ipTM=0.24 tol=8.49
2024-12-10 06:20:14,146 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=47.6 pTM=0.331 ipTM=0.245 tol=7.08
2024-12-10 06:21:01,666 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=47.6 pTM=0.331 ipTM=0.247 tol=8.77
2024-12-10 06:21:49,173 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=47.8 pTM=0.332 ipTM=0.249 tol=3.73
2024-12-10 06:22:36,713 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=47.6 pTM=0.33 ipTM=0.247 tol=2.99
2024-12-10 06:23:24,201 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=47.7 pTM=0.332 ipTM=0.252 tol=2.33
2024-12-10 06:24:11,716 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=47.7 pTM=0.334 ipTM=0.25 tol=2.58
2024-12-10 06:24:59,233 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=47.7 pTM=0.334 ipTM=0.252 tol=2.37
2024-12-10 06:25:46,759 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=47.9 pTM=0.336 ipTM=0.252 tol=2.38
2024-12-10 06:26:34,309 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=47.2 pTM=0.336 ipTM=0.258 tol=16.9
2024-12-10 06:27:21,850 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=47.8 pTM=0.332 ipTM=0.246 tol=12.7
2024-12-10 06:28:09,380 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=47.8 pTM=0.337 ipTM=0.258 tol=10.9
2024-12-10 06:28:56,908 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=47.8 pTM=0.333 ipTM=0.255 tol=4.17
2024-12-10 06:29:44,446 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=47.9 pTM=0.336 ipTM=0.254 tol=8.5
2024-12-10 06:30:31,980 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=47.8 pTM=0.331 ipTM=0.25 tol=3.99
2024-12-10 06:30:31,981 alphafold2_multimer_v3_model_3_seed_000 took 1473.8s (30 recycles)
2024-12-10 06:31:20,542 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=44.3 pTM=0.304 ipTM=0.232
2024-12-10 06:32:08,037 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=46.4 pTM=0.309 ipTM=0.249 tol=20.2
2024-12-10 06:32:55,541 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=46.4 pTM=0.308 ipTM=0.239 tol=12.2
2024-12-10 06:33:43,076 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=46.8 pTM=0.316 ipTM=0.241 tol=12
2024-12-10 06:34:30,625 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=46.6 pTM=0.316 ipTM=0.23 tol=10
2024-12-10 06:35:18,226 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=46.8 pTM=0.316 ipTM=0.229 tol=5.49
2024-12-10 06:36:05,830 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=47 pTM=0.315 ipTM=0.225 tol=5.66
2024-12-10 06:36:53,406 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=47.1 pTM=0.317 ipTM=0.23 tol=3.63
2024-12-10 06:37:40,968 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=46.9 pTM=0.312 ipTM=0.221 tol=4.99
2024-12-10 06:38:28,535 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=47 pTM=0.312 ipTM=0.223 tol=3.17
2024-12-10 06:39:16,095 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=47 pTM=0.31 ipTM=0.221 tol=10.2
2024-12-10 06:40:03,681 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=47.2 pTM=0.309 ipTM=0.221 tol=11.3
2024-12-10 06:40:51,261 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=47.2 pTM=0.311 ipTM=0.224 tol=11.5
2024-12-10 06:41:38,828 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=47.2 pTM=0.313 ipTM=0.225 tol=10.1
2024-12-10 06:42:26,401 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=47 pTM=0.311 ipTM=0.223 tol=7.16
2024-12-10 06:43:14,005 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=47.1 pTM=0.312 ipTM=0.221 tol=7.04
2024-12-10 06:44:01,593 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=47.3 pTM=0.312 ipTM=0.222 tol=9.62
2024-12-10 06:44:49,176 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=47.2 pTM=0.31 ipTM=0.22 tol=5.66
2024-12-10 06:45:36,776 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=47.1 pTM=0.309 ipTM=0.221 tol=5.92
2024-12-10 06:46:24,360 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=47.2 pTM=0.311 ipTM=0.225 tol=8.03
2024-12-10 06:47:11,961 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=47.2 pTM=0.312 ipTM=0.224 tol=6.24
2024-12-10 06:47:59,537 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=47.2 pTM=0.311 ipTM=0.224 tol=5.68
2024-12-10 06:48:47,131 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=47.3 pTM=0.314 ipTM=0.225 tol=7.09
2024-12-10 06:49:34,749 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=47.1 pTM=0.311 ipTM=0.223 tol=10.1
2024-12-10 06:50:22,359 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=47.2 pTM=0.314 ipTM=0.228 tol=10.1
2024-12-10 06:51:10,001 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=46.9 pTM=0.312 ipTM=0.225 tol=10.5
2024-12-10 06:51:57,630 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=47 pTM=0.314 ipTM=0.226 tol=11.8
2024-12-10 06:52:45,249 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=47.1 pTM=0.313 ipTM=0.225 tol=5.91
2024-12-10 06:53:32,875 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=47.1 pTM=0.311 ipTM=0.222 tol=11
2024-12-10 06:54:20,477 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=47.2 pTM=0.31 ipTM=0.221 tol=7.69
2024-12-10 06:55:08,053 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=47.1 pTM=0.31 ipTM=0.222 tol=7.5
2024-12-10 06:55:08,054 alphafold2_multimer_v3_model_4_seed_000 took 1475.0s (30 recycles)
2024-12-10 06:55:56,722 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=45.3 pTM=0.298 ipTM=0.22
2024-12-10 06:56:44,310 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=46.1 pTM=0.302 ipTM=0.243 tol=15.6
2024-12-10 06:57:31,945 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=46.8 pTM=0.302 ipTM=0.23 tol=8.94
2024-12-10 06:58:19,576 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=46.8 pTM=0.307 ipTM=0.237 tol=9.67
2024-12-10 06:59:07,197 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=47 pTM=0.308 ipTM=0.234 tol=8.98
2024-12-10 06:59:54,819 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=47.2 pTM=0.311 ipTM=0.237 tol=8.03
2024-12-10 07:00:42,428 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=47.1 pTM=0.309 ipTM=0.232 tol=11.1
2024-12-10 07:01:30,020 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=47 pTM=0.311 ipTM=0.233 tol=10
2024-12-10 07:02:17,620 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=47 pTM=0.311 ipTM=0.233 tol=9.62
2024-12-10 07:03:05,250 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=47.1 pTM=0.31 ipTM=0.231 tol=7.72
2024-12-10 07:03:52,886 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=47.2 pTM=0.314 ipTM=0.235 tol=12.3
2024-12-10 07:04:40,506 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=47.2 pTM=0.313 ipTM=0.234 tol=7.66
2024-12-10 07:05:28,116 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=47.2 pTM=0.312 ipTM=0.233 tol=14.4
2024-12-10 07:06:15,756 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=47.5 pTM=0.313 ipTM=0.237 tol=13.6
2024-12-10 07:07:03,384 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=47.2 pTM=0.31 ipTM=0.23 tol=9.94
2024-12-10 07:07:51,011 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=47.1 pTM=0.313 ipTM=0.233 tol=7.39
2024-12-10 07:08:38,639 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=47.3 pTM=0.314 ipTM=0.233 tol=10.6
2024-12-10 07:09:26,250 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=47.2 pTM=0.315 ipTM=0.237 tol=10.2
2024-12-10 07:10:13,864 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=47.1 pTM=0.311 ipTM=0.234 tol=8.26
2024-12-10 07:11:01,494 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=47.4 pTM=0.314 ipTM=0.238 tol=8.99
2024-12-10 07:11:49,090 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=47.4 pTM=0.317 ipTM=0.238 tol=15
2024-12-10 07:12:36,711 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=47.2 pTM=0.313 ipTM=0.238 tol=9.33
2024-12-10 07:13:24,314 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=47.2 pTM=0.317 ipTM=0.239 tol=11.3
2024-12-10 07:14:11,961 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=47.2 pTM=0.312 ipTM=0.235 tol=7.3
2024-12-10 07:14:59,587 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=47.4 pTM=0.318 ipTM=0.241 tol=12.6
2024-12-10 07:15:47,199 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=47.2 pTM=0.316 ipTM=0.239 tol=9.76
2024-12-10 07:16:34,827 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=47.2 pTM=0.315 ipTM=0.235 tol=5.49
2024-12-10 07:17:22,427 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=47.3 pTM=0.316 ipTM=0.242 tol=8.24
2024-12-10 07:18:10,054 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=47.2 pTM=0.316 ipTM=0.241 tol=9.08
2024-12-10 07:18:57,679 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=47.5 pTM=0.317 ipTM=0.241 tol=8.83
2024-12-10 07:19:45,288 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=47.2 pTM=0.315 ipTM=0.242 tol=5.18
2024-12-10 07:19:45,289 alphafold2_multimer_v3_model_5_seed_000 took 1476.2s (30 recycles)
2024-12-10 07:19:46,365 reranking models by 'multimer' metric
2024-12-10 07:19:47,657 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-10 07:22:23,077 Relaxation took 156.7s
2024-12-10 07:22:23,078 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=47.8 pTM=0.331 ipTM=0.25
2024-12-10 07:25:02,420 Relaxation took 159.3s
2024-12-10 07:25:02,420 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=47.2 pTM=0.315 ipTM=0.242
2024-12-10 07:27:49,648 Relaxation took 167.2s
2024-12-10 07:27:49,648 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=47.5 pTM=0.312 ipTM=0.242
2024-12-10 07:29:46,302 Relaxation took 116.7s
2024-12-10 07:29:46,302 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=48.1 pTM=0.318 ipTM=0.229
2024-12-10 07:31:49,856 Relaxation took 123.6s
2024-12-10 07:31:49,857 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=47.1 pTM=0.31 ipTM=0.222
2024-12-10 07:31:52,465 Done