2024-05-06 12:45:47,000 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-05-06 12:45:48,607 Running on GPU
2024-05-06 12:45:53,553 Found 6 citations for tools or databases
2024-05-06 12:45:53,554 Query 1/1: BNIP3L_SKP1 (length 382)
2024-05-06 12:45:53,992 Sleeping for 6s. Reason: PENDING
2024-05-06 12:46:00,403 Sleeping for 10s. Reason: RUNNING
2024-05-06 12:46:10,844 Sleeping for 5s. Reason: RUNNING
2024-05-06 12:46:16,263 Sleeping for 6s. Reason: RUNNING
2024-05-06 12:46:29,576 Sleeping for 7s. Reason: PENDING
2024-05-06 12:46:36,993 Sleeping for 5s. Reason: RUNNING
2024-05-06 12:46:42,403 Sleeping for 10s. Reason: RUNNING
2024-05-06 12:46:54,865 Setting max_seq=508, max_extra_seq=2048
2024-05-06 12:49:34,787 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=46.4 pTM=0.441 ipTM=0.212
2024-05-06 12:49:38,637 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=46.6 pTM=0.433 ipTM=0.183 tol=6.53
2024-05-06 12:49:42,486 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=47.9 pTM=0.448 ipTM=0.231 tol=2.96
2024-05-06 12:49:46,333 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=47.9 pTM=0.446 ipTM=0.225 tol=2.37
2024-05-06 12:49:50,175 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=47.7 pTM=0.446 ipTM=0.215 tol=2.25
2024-05-06 12:49:54,020 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=48.2 pTM=0.453 ipTM=0.24 tol=1.83
2024-05-06 12:49:57,868 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=48.4 pTM=0.449 ipTM=0.222 tol=1.93
2024-05-06 12:50:01,714 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=48.5 pTM=0.456 ipTM=0.239 tol=1.4
2024-05-06 12:50:05,554 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=48.5 pTM=0.456 ipTM=0.256 tol=1.25
2024-05-06 12:50:09,389 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=48.5 pTM=0.457 ipTM=0.246 tol=0.976
2024-05-06 12:50:13,223 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=48.7 pTM=0.459 ipTM=0.274 tol=1.58
2024-05-06 12:50:17,059 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=48.9 pTM=0.464 ipTM=0.291 tol=1.68
2024-05-06 12:50:20,897 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=49.1 pTM=0.464 ipTM=0.316 tol=1.37
2024-05-06 12:50:24,736 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=49.3 pTM=0.468 ipTM=0.331 tol=1.4
2024-05-06 12:50:28,573 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=48.8 pTM=0.458 ipTM=0.284 tol=1.2
2024-05-06 12:50:32,410 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=49 pTM=0.462 ipTM=0.282 tol=1.6
2024-05-06 12:50:36,254 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=49.1 pTM=0.458 ipTM=0.271 tol=2.55
2024-05-06 12:50:40,093 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=49.7 pTM=0.472 ipTM=0.326 tol=2.08
2024-05-06 12:50:43,931 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=49 pTM=0.463 ipTM=0.312 tol=1.35
2024-05-06 12:50:47,771 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=49.6 pTM=0.472 ipTM=0.337 tol=1.32
2024-05-06 12:50:51,610 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=48.9 pTM=0.46 ipTM=0.305 tol=1.38
2024-05-06 12:50:55,451 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=49.3 pTM=0.466 ipTM=0.313 tol=1.65
2024-05-06 12:50:59,294 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=48.8 pTM=0.462 ipTM=0.308 tol=1.45
2024-05-06 12:51:03,134 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=49 pTM=0.464 ipTM=0.296 tol=1.72
2024-05-06 12:51:06,974 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=49.2 pTM=0.462 ipTM=0.306 tol=1.67
2024-05-06 12:51:10,814 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=49.3 pTM=0.466 ipTM=0.293 tol=1.7
2024-05-06 12:51:14,656 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=48.8 pTM=0.458 ipTM=0.291 tol=0.958
2024-05-06 12:51:18,495 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=49.3 pTM=0.468 ipTM=0.3 tol=1.05
2024-05-06 12:51:22,333 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=49 pTM=0.459 ipTM=0.292 tol=0.941
2024-05-06 12:51:26,176 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=49.3 pTM=0.469 ipTM=0.305 tol=1.7
2024-05-06 12:51:30,020 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=48.7 pTM=0.455 ipTM=0.274 tol=1.75
2024-05-06 12:51:30,020 alphafold2_multimer_v3_model_1_seed_000 took 263.4s (30 recycles)
2024-05-06 12:51:33,981 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=50.8 pTM=0.519 ipTM=0.712
2024-05-06 12:51:37,813 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=45.8 pTM=0.441 ipTM=0.247 tol=8.62
2024-05-06 12:51:41,643 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=46.8 pTM=0.433 ipTM=0.217 tol=7.8
2024-05-06 12:51:45,472 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=47.2 pTM=0.427 ipTM=0.234 tol=6.19
2024-05-06 12:51:49,305 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=47.1 pTM=0.428 ipTM=0.254 tol=3.06
2024-05-06 12:51:53,140 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=47.8 pTM=0.431 ipTM=0.256 tol=2.54
2024-05-06 12:51:56,971 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=47.6 pTM=0.425 ipTM=0.25 tol=1.49
2024-05-06 12:52:00,810 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=48 pTM=0.432 ipTM=0.259 tol=3.15
2024-05-06 12:52:04,644 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=47.7 pTM=0.428 ipTM=0.247 tol=1.95
2024-05-06 12:52:08,476 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=48.1 pTM=0.432 ipTM=0.271 tol=1.52
2024-05-06 12:52:12,302 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=47.7 pTM=0.426 ipTM=0.252 tol=1.88
2024-05-06 12:52:16,136 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=48.4 pTM=0.434 ipTM=0.265 tol=1.99
2024-05-06 12:52:19,969 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=48.2 pTM=0.43 ipTM=0.271 tol=1.36
2024-05-06 12:52:23,801 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=48.2 pTM=0.427 ipTM=0.258 tol=1.42
2024-05-06 12:52:27,637 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=48.4 pTM=0.43 ipTM=0.267 tol=0.934
2024-05-06 12:52:31,468 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=48.1 pTM=0.43 ipTM=0.275 tol=1.42
2024-05-06 12:52:35,299 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=48.4 pTM=0.431 ipTM=0.281 tol=1.36
2024-05-06 12:52:39,131 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=48.1 pTM=0.431 ipTM=0.281 tol=1.11
2024-05-06 12:52:42,967 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=48.4 pTM=0.433 ipTM=0.281 tol=0.798
2024-05-06 12:52:46,800 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=48.2 pTM=0.429 ipTM=0.266 tol=1.56
2024-05-06 12:52:50,632 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=48 pTM=0.429 ipTM=0.28 tol=1.86
2024-05-06 12:52:54,465 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=48 pTM=0.428 ipTM=0.258 tol=1.13
2024-05-06 12:52:58,296 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=47.8 pTM=0.428 ipTM=0.267 tol=1
2024-05-06 12:53:02,125 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=48 pTM=0.427 ipTM=0.26 tol=2
2024-05-06 12:53:05,961 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=48.3 pTM=0.429 ipTM=0.273 tol=2.14
2024-05-06 12:53:09,789 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=48 pTM=0.426 ipTM=0.251 tol=1.52
2024-05-06 12:53:13,616 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=48.1 pTM=0.427 ipTM=0.25 tol=0.991
2024-05-06 12:53:17,448 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=48.4 pTM=0.432 ipTM=0.263 tol=1.49
2024-05-06 12:53:21,282 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=48.2 pTM=0.43 ipTM=0.259 tol=2.26
2024-05-06 12:53:25,117 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=48.3 pTM=0.434 ipTM=0.267 tol=2.62
2024-05-06 12:53:28,949 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=47.9 pTM=0.426 ipTM=0.244 tol=1.84
2024-05-06 12:53:28,949 alphafold2_multimer_v3_model_2_seed_000 took 118.8s (30 recycles)
2024-05-06 12:53:32,904 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=47.3 pTM=0.441 ipTM=0.224
2024-05-06 12:53:36,738 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=47.9 pTM=0.465 ipTM=0.233 tol=8.3
2024-05-06 12:53:40,573 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=48.2 pTM=0.472 ipTM=0.417 tol=3.24
2024-05-06 12:53:44,398 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=48.6 pTM=0.478 ipTM=0.401 tol=4
2024-05-06 12:53:48,228 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=48.6 pTM=0.476 ipTM=0.405 tol=2.86
2024-05-06 12:53:52,057 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=49.4 pTM=0.492 ipTM=0.469 tol=1.43
2024-05-06 12:53:55,887 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=48.9 pTM=0.481 ipTM=0.486 tol=2.34
2024-05-06 12:53:59,712 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=49.1 pTM=0.495 ipTM=0.507 tol=3.93
2024-05-06 12:54:03,541 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=48.8 pTM=0.484 ipTM=0.486 tol=1.96
2024-05-06 12:54:07,365 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=50.4 pTM=0.509 ipTM=0.57 tol=2.61
2024-05-06 12:54:11,188 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=49.3 pTM=0.49 ipTM=0.516 tol=1.99
2024-05-06 12:54:15,016 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=50.7 pTM=0.496 ipTM=0.541 tol=4.62
2024-05-06 12:54:18,843 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=49.1 pTM=0.49 ipTM=0.525 tol=3.28
2024-05-06 12:54:22,668 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=50.6 pTM=0.51 ipTM=0.594 tol=1.24
2024-05-06 12:54:26,495 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=49.9 pTM=0.495 ipTM=0.556 tol=1.96
2024-05-06 12:54:30,320 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=50.6 pTM=0.501 ipTM=0.601 tol=2.07
2024-05-06 12:54:34,147 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=49.9 pTM=0.498 ipTM=0.56 tol=2.55
2024-05-06 12:54:37,975 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=50.8 pTM=0.512 ipTM=0.585 tol=0.846
2024-05-06 12:54:41,804 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=50.1 pTM=0.493 ipTM=0.56 tol=0.918
2024-05-06 12:54:45,629 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=51.1 pTM=0.519 ipTM=0.59 tol=2.4
2024-05-06 12:54:49,454 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=49.3 pTM=0.495 ipTM=0.523 tol=1.88
2024-05-06 12:54:53,280 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=51.3 pTM=0.508 ipTM=0.596 tol=4.25
2024-05-06 12:54:57,105 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=48.9 pTM=0.487 ipTM=0.533 tol=3.16
2024-05-06 12:55:00,932 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=50.2 pTM=0.502 ipTM=0.578 tol=1.37
2024-05-06 12:55:04,761 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=50.2 pTM=0.496 ipTM=0.548 tol=2.82
2024-05-06 12:55:08,587 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=50.2 pTM=0.504 ipTM=0.598 tol=2.31
2024-05-06 12:55:12,411 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=50.4 pTM=0.505 ipTM=0.574 tol=1.55
2024-05-06 12:55:16,235 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=50.7 pTM=0.505 ipTM=0.587 tol=2.81
2024-05-06 12:55:20,064 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=50.1 pTM=0.499 ipTM=0.57 tol=1.9
2024-05-06 12:55:23,891 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=50.3 pTM=0.502 ipTM=0.583 tol=0.839
2024-05-06 12:55:27,720 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=49.8 pTM=0.494 ipTM=0.541 tol=1.4
2024-05-06 12:55:27,720 alphafold2_multimer_v3_model_3_seed_000 took 118.7s (30 recycles)
2024-05-06 12:55:31,690 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=48 pTM=0.414 ipTM=0.263
2024-05-06 12:55:35,548 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=48 pTM=0.423 ipTM=0.185 tol=8.38
2024-05-06 12:55:39,405 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=47.9 pTM=0.423 ipTM=0.222 tol=5.76
2024-05-06 12:55:43,255 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=47.8 pTM=0.436 ipTM=0.226 tol=6.5
2024-05-06 12:55:47,107 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=47.5 pTM=0.437 ipTM=0.2 tol=7.5
2024-05-06 12:55:50,959 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=47.8 pTM=0.44 ipTM=0.206 tol=4.32
2024-05-06 12:55:54,807 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=48.3 pTM=0.446 ipTM=0.223 tol=3.89
2024-05-06 12:55:58,659 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=48.5 pTM=0.432 ipTM=0.252 tol=5.13
2024-05-06 12:56:02,510 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=47.9 pTM=0.433 ipTM=0.205 tol=1.6
2024-05-06 12:56:06,359 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=48.5 pTM=0.44 ipTM=0.233 tol=2.82
2024-05-06 12:56:10,206 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=48.5 pTM=0.431 ipTM=0.21 tol=2.38
2024-05-06 12:56:14,056 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=48.8 pTM=0.441 ipTM=0.203 tol=2.18
2024-05-06 12:56:17,905 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=48.4 pTM=0.433 ipTM=0.204 tol=4.05
2024-05-06 12:56:21,754 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=47.9 pTM=0.434 ipTM=0.204 tol=2.11
2024-05-06 12:56:25,604 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=48.5 pTM=0.439 ipTM=0.209 tol=4.25
2024-05-06 12:56:29,455 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=48.3 pTM=0.43 ipTM=0.195 tol=3.79
2024-05-06 12:56:33,305 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=48.3 pTM=0.434 ipTM=0.193 tol=2.43
2024-05-06 12:56:37,151 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=48.3 pTM=0.438 ipTM=0.196 tol=1.51
2024-05-06 12:56:40,999 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=48.1 pTM=0.434 ipTM=0.207 tol=1.74
2024-05-06 12:56:44,849 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=48.4 pTM=0.44 ipTM=0.198 tol=1.71
2024-05-06 12:56:48,697 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=48.1 pTM=0.432 ipTM=0.194 tol=2.01
2024-05-06 12:56:52,551 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=48.3 pTM=0.435 ipTM=0.203 tol=1.72
2024-05-06 12:56:56,398 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=47.9 pTM=0.434 ipTM=0.19 tol=2.55
2024-05-06 12:57:00,251 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=48.5 pTM=0.428 ipTM=0.193 tol=3.37
2024-05-06 12:57:04,103 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=48.5 pTM=0.433 ipTM=0.204 tol=3.19
2024-05-06 12:57:07,953 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=48.2 pTM=0.433 ipTM=0.191 tol=3.45
2024-05-06 12:57:11,801 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=48.1 pTM=0.434 ipTM=0.176 tol=4.21
2024-05-06 12:57:15,653 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=48.5 pTM=0.438 ipTM=0.233 tol=8.34
2024-05-06 12:57:19,505 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=48.4 pTM=0.44 ipTM=0.218 tol=3.01
2024-05-06 12:57:23,355 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=48.9 pTM=0.443 ipTM=0.226 tol=3.69
2024-05-06 12:57:27,204 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=48.3 pTM=0.437 ipTM=0.231 tol=1.96
2024-05-06 12:57:27,205 alphafold2_multimer_v3_model_4_seed_000 took 119.4s (30 recycles)
2024-05-06 12:57:31,166 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=45.8 pTM=0.426 ipTM=0.265
2024-05-06 12:57:35,009 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=46.2 pTM=0.42 ipTM=0.189 tol=13.3
2024-05-06 12:57:38,857 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=46.3 pTM=0.408 ipTM=0.17 tol=5
2024-05-06 12:57:42,699 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=46.8 pTM=0.407 ipTM=0.178 tol=2.38
2024-05-06 12:57:46,547 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=46.7 pTM=0.404 ipTM=0.176 tol=1.78
2024-05-06 12:57:50,396 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=47 pTM=0.411 ipTM=0.189 tol=4
2024-05-06 12:57:54,243 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=46.3 pTM=0.404 ipTM=0.166 tol=2.95
2024-05-06 12:57:58,093 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=46.8 pTM=0.411 ipTM=0.19 tol=2.92
2024-05-06 12:58:01,943 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=46 pTM=0.404 ipTM=0.16 tol=5.32
2024-05-06 12:58:05,790 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=47 pTM=0.416 ipTM=0.202 tol=3.67
2024-05-06 12:58:09,639 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=46.8 pTM=0.401 ipTM=0.161 tol=3.67
2024-05-06 12:58:13,487 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=47.3 pTM=0.416 ipTM=0.202 tol=4.39
2024-05-06 12:58:17,337 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=46.7 pTM=0.403 ipTM=0.162 tol=4.47
2024-05-06 12:58:21,181 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=46.9 pTM=0.409 ipTM=0.189 tol=2.29
2024-05-06 12:58:25,033 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=46.7 pTM=0.403 ipTM=0.165 tol=4.26
2024-05-06 12:58:28,873 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=46.3 pTM=0.409 ipTM=0.193 tol=4.38
2024-05-06 12:58:32,724 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=46.3 pTM=0.402 ipTM=0.166 tol=2.33
2024-05-06 12:58:36,568 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=46.8 pTM=0.412 ipTM=0.192 tol=2.78
2024-05-06 12:58:40,420 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=46.4 pTM=0.405 ipTM=0.168 tol=2.17
2024-05-06 12:58:44,272 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=47.3 pTM=0.413 ipTM=0.197 tol=2.82
2024-05-06 12:58:48,123 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=46.3 pTM=0.405 ipTM=0.168 tol=3.72
2024-05-06 12:58:51,972 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=46.8 pTM=0.413 ipTM=0.191 tol=3.9
2024-05-06 12:58:55,823 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=46.5 pTM=0.409 ipTM=0.176 tol=2.16
2024-05-06 12:58:59,671 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=46.6 pTM=0.408 ipTM=0.183 tol=2.11
2024-05-06 12:59:03,524 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=46.8 pTM=0.408 ipTM=0.181 tol=1.38
2024-05-06 12:59:07,372 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=46.8 pTM=0.409 ipTM=0.189 tol=1.91
2024-05-06 12:59:11,218 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=46.5 pTM=0.407 ipTM=0.174 tol=2.16
2024-05-06 12:59:15,065 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=47.1 pTM=0.412 ipTM=0.195 tol=2.33
2024-05-06 12:59:18,916 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=46.6 pTM=0.407 ipTM=0.178 tol=4.22
2024-05-06 12:59:22,769 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=47.2 pTM=0.416 ipTM=0.199 tol=4.39
2024-05-06 12:59:26,619 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=46.6 pTM=0.407 ipTM=0.181 tol=4.3
2024-05-06 12:59:26,619 alphafold2_multimer_v3_model_5_seed_000 took 119.3s (30 recycles)
2024-05-06 12:59:26,731 reranking models by 'multimer' metric
2024-05-06 12:59:29,525 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-05-06 12:59:56,014 Relaxation took 29.3s
2024-05-06 12:59:56,014 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=49.8 pTM=0.494 ipTM=0.541
2024-05-06 13:00:15,083 Relaxation took 19.1s
2024-05-06 13:00:15,083 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=48.7 pTM=0.455 ipTM=0.274
2024-05-06 13:00:33,375 Relaxation took 18.3s
2024-05-06 13:00:33,375 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=47.9 pTM=0.426 ipTM=0.244
2024-05-06 13:00:57,695 Relaxation took 24.3s
2024-05-06 13:00:57,695 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=48.3 pTM=0.437 ipTM=0.231
2024-05-06 13:01:10,514 Relaxation took 12.8s
2024-05-06 13:01:10,514 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=46.6 pTM=0.407 ipTM=0.181
2024-05-06 13:01:11,392 Done