2024-05-06 13:01:49,814 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-05-06 13:01:50,126 Running on GPU 2024-05-06 13:01:53,736 Found 6 citations for tools or databases 2024-05-06 13:01:53,736 Query 1/1: BNIP3_FBXW11 (length 736) 2024-05-06 13:01:54,265 Sleeping for 9s. Reason: PENDING 2024-05-06 13:02:04,211 Sleeping for 8s. Reason: RUNNING 2024-05-06 13:02:12,637 Sleeping for 10s. Reason: RUNNING 2024-05-06 13:02:23,064 Sleeping for 8s. Reason: RUNNING 2024-05-06 13:02:31,491 Sleeping for 9s. Reason: RUNNING 2024-05-06 13:02:40,929 Sleeping for 10s. Reason: RUNNING 2024-05-06 13:02:51,366 Sleeping for 9s. Reason: RUNNING 2024-05-06 13:03:00,810 Sleeping for 9s. Reason: RUNNING 2024-05-06 13:03:10,456 Sleeping for 6s. Reason: RUNNING 2024-05-06 13:03:16,894 Sleeping for 6s. Reason: RUNNING 2024-05-06 13:03:23,553 Sleeping for 9s. Reason: RUNNING 2024-05-06 13:03:32,971 Sleeping for 6s. Reason: RUNNING 2024-05-06 13:03:39,393 Sleeping for 9s. Reason: RUNNING 2024-05-06 13:03:52,804 Sleeping for 7s. Reason: PENDING 2024-05-06 13:04:00,218 Sleeping for 7s. Reason: RUNNING 2024-05-06 13:04:08,108 Sleeping for 10s. Reason: RUNNING 2024-05-06 13:04:18,520 Sleeping for 5s. Reason: RUNNING 2024-05-06 13:04:23,956 Sleeping for 7s. Reason: RUNNING 2024-05-06 13:04:31,373 Sleeping for 6s. Reason: RUNNING 2024-05-06 13:04:37,792 Sleeping for 9s. Reason: RUNNING 2024-05-06 13:04:47,239 Sleeping for 7s. Reason: RUNNING 2024-05-06 13:04:54,645 Sleeping for 6s. Reason: RUNNING 2024-05-06 13:05:04,065 Setting max_seq=508, max_extra_seq=2048 2024-05-06 13:07:05,375 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=66.9 pTM=0.596 ipTM=0.182 2024-05-06 13:07:15,225 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=67.6 pTM=0.605 ipTM=0.186 tol=9.62 2024-05-06 13:07:25,066 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=68.4 pTM=0.607 ipTM=0.185 tol=5.55 2024-05-06 13:07:34,924 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=68.6 pTM=0.606 ipTM=0.176 tol=2.73 2024-05-06 13:07:44,767 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=68.5 pTM=0.601 ipTM=0.171 tol=1.89 2024-05-06 13:07:54,611 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=68.5 pTM=0.6 ipTM=0.17 tol=1.16 2024-05-06 13:08:04,474 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=68.5 pTM=0.6 ipTM=0.168 tol=1.29 2024-05-06 13:08:14,343 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=68.5 pTM=0.601 ipTM=0.167 tol=2.19 2024-05-06 13:08:24,217 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=68.6 pTM=0.6 ipTM=0.169 tol=4.71 2024-05-06 13:08:34,094 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=68.5 pTM=0.599 ipTM=0.172 tol=2.8 2024-05-06 13:08:43,988 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=68.7 pTM=0.604 ipTM=0.17 tol=1.84 2024-05-06 13:08:53,903 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=68.8 pTM=0.604 ipTM=0.17 tol=2.94 2024-05-06 13:09:03,791 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=68.6 pTM=0.601 ipTM=0.169 tol=1.67 2024-05-06 13:09:13,676 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=68.6 pTM=0.601 ipTM=0.167 tol=1.71 2024-05-06 13:09:23,585 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=68.6 pTM=0.603 ipTM=0.169 tol=1.37 2024-05-06 13:09:33,478 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=68.4 pTM=0.6 ipTM=0.166 tol=1.17 2024-05-06 13:09:43,360 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=68.2 pTM=0.598 ipTM=0.166 tol=1.51 2024-05-06 13:09:53,258 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=68.5 pTM=0.602 ipTM=0.17 tol=1.67 2024-05-06 13:10:03,131 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=68 pTM=0.599 ipTM=0.171 tol=1.85 2024-05-06 13:10:13,040 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=68.2 pTM=0.599 ipTM=0.168 tol=1.6 2024-05-06 13:10:22,959 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=68.1 pTM=0.6 ipTM=0.175 tol=7.36 2024-05-06 13:10:32,871 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=68.1 pTM=0.597 ipTM=0.161 tol=3.28 2024-05-06 13:10:42,805 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=68.4 pTM=0.605 ipTM=0.176 tol=1.83 2024-05-06 13:10:52,726 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=68.6 pTM=0.604 ipTM=0.168 tol=1.81 2024-05-06 13:11:02,640 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=68.4 pTM=0.603 ipTM=0.173 tol=1.17 2024-05-06 13:11:12,560 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=68.5 pTM=0.602 ipTM=0.167 tol=1.78 2024-05-06 13:11:22,477 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=68.3 pTM=0.601 ipTM=0.17 tol=1.67 2024-05-06 13:11:32,390 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=68.5 pTM=0.601 ipTM=0.168 tol=1.33 2024-05-06 13:11:42,297 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=68.3 pTM=0.6 ipTM=0.167 tol=1.38 2024-05-06 13:11:52,215 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=68.6 pTM=0.603 ipTM=0.167 tol=1.03 2024-05-06 13:12:02,124 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=68.6 pTM=0.602 ipTM=0.166 tol=1.44 2024-05-06 13:12:02,125 alphafold2_multimer_v3_model_1_seed_000 took 412.9s (30 recycles) 2024-05-06 13:12:12,424 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=67.8 pTM=0.591 ipTM=0.141 2024-05-06 13:12:22,375 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=68.2 pTM=0.608 ipTM=0.208 tol=14.7 2024-05-06 13:12:32,351 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=69.4 pTM=0.613 ipTM=0.434 tol=4.15 2024-05-06 13:12:42,305 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=69.2 pTM=0.61 ipTM=0.248 tol=2.51 2024-05-06 13:12:52,257 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=69.3 pTM=0.604 ipTM=0.24 tol=1.91 2024-05-06 13:13:02,225 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=69.4 pTM=0.604 ipTM=0.247 tol=1.9 2024-05-06 13:13:12,202 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=69.2 pTM=0.604 ipTM=0.289 tol=1.85 2024-05-06 13:13:22,199 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=69.3 pTM=0.604 ipTM=0.256 tol=1.41 2024-05-06 13:13:32,189 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=69.4 pTM=0.602 ipTM=0.24 tol=1.51 2024-05-06 13:13:42,157 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=69.4 pTM=0.603 ipTM=0.282 tol=1.52 2024-05-06 13:13:52,154 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=69.6 pTM=0.602 ipTM=0.248 tol=1.65 2024-05-06 13:14:02,149 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=69.6 pTM=0.603 ipTM=0.268 tol=1.86 2024-05-06 13:14:12,146 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=69.6 pTM=0.603 ipTM=0.248 tol=2.1 2024-05-06 13:14:22,133 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=69.4 pTM=0.603 ipTM=0.243 tol=3.13 2024-05-06 13:14:32,127 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=69.5 pTM=0.604 ipTM=0.244 tol=3.14 2024-05-06 13:14:42,109 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=69.3 pTM=0.605 ipTM=0.263 tol=1.82 2024-05-06 13:14:52,073 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=69.2 pTM=0.605 ipTM=0.287 tol=1.78 2024-05-06 13:15:02,047 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=69.4 pTM=0.609 ipTM=0.28 tol=2.39 2024-05-06 13:15:12,016 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=69.1 pTM=0.61 ipTM=0.257 tol=1.8 2024-05-06 13:15:21,977 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=69.2 pTM=0.61 ipTM=0.256 tol=3.28 2024-05-06 13:15:31,955 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=69.4 pTM=0.61 ipTM=0.234 tol=2.91 2024-05-06 13:15:41,921 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=69.4 pTM=0.611 ipTM=0.248 tol=2.03 2024-05-06 13:15:51,902 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=69.4 pTM=0.614 ipTM=0.266 tol=2.74 2024-05-06 13:16:01,868 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=69.6 pTM=0.614 ipTM=0.249 tol=2.65 2024-05-06 13:16:11,845 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=69.6 pTM=0.612 ipTM=0.242 tol=2.57 2024-05-06 13:16:21,828 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=69.6 pTM=0.616 ipTM=0.255 tol=5.63 2024-05-06 13:16:31,784 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=69.6 pTM=0.618 ipTM=0.24 tol=8.02 2024-05-06 13:16:41,749 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=70 pTM=0.621 ipTM=0.232 tol=1.74 2024-05-06 13:16:51,703 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=70.1 pTM=0.622 ipTM=0.223 tol=2.83 2024-05-06 13:17:01,669 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=70.2 pTM=0.625 ipTM=0.219 tol=1.64 2024-05-06 13:17:11,599 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=70.1 pTM=0.622 ipTM=0.225 tol=1.66 2024-05-06 13:17:11,599 alphafold2_multimer_v3_model_2_seed_000 took 309.1s (30 recycles) 2024-05-06 13:17:22,565 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=67.2 pTM=0.612 ipTM=0.203 2024-05-06 13:17:32,599 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=68.3 pTM=0.625 ipTM=0.217 tol=13 2024-05-06 13:17:42,627 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=68.6 pTM=0.619 ipTM=0.185 tol=5.27 2024-05-06 13:17:52,644 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=68.2 pTM=0.621 ipTM=0.19 tol=3.46 2024-05-06 13:18:02,654 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=68.3 pTM=0.62 ipTM=0.187 tol=2.12 2024-05-06 13:18:12,672 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=68.2 pTM=0.622 ipTM=0.193 tol=1.4 2024-05-06 13:18:22,691 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=68.4 pTM=0.62 ipTM=0.186 tol=1.42 2024-05-06 13:18:32,710 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=68.5 pTM=0.618 ipTM=0.179 tol=2.23 2024-05-06 13:18:42,725 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=68.9 pTM=0.621 ipTM=0.19 tol=1.14 2024-05-06 13:18:52,741 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=68.7 pTM=0.621 ipTM=0.191 tol=2.29 2024-05-06 13:19:02,780 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=68.9 pTM=0.622 ipTM=0.184 tol=1.76 2024-05-06 13:19:12,795 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=68.4 pTM=0.625 ipTM=0.204 tol=3.06 2024-05-06 13:19:22,820 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=68.8 pTM=0.621 ipTM=0.188 tol=1.61 2024-05-06 13:19:32,822 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=68.6 pTM=0.616 ipTM=0.174 tol=1.35 2024-05-06 13:19:42,856 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=68.8 pTM=0.622 ipTM=0.19 tol=1.46 2024-05-06 13:19:52,860 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=68.6 pTM=0.616 ipTM=0.179 tol=1.11 2024-05-06 13:20:02,875 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=68.6 pTM=0.617 ipTM=0.184 tol=1.37 2024-05-06 13:20:12,883 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=68.6 pTM=0.618 ipTM=0.189 tol=1.34 2024-05-06 13:20:22,887 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=68.4 pTM=0.621 ipTM=0.192 tol=2.02 2024-05-06 13:20:32,892 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=68.4 pTM=0.621 ipTM=0.197 tol=1.86 2024-05-06 13:20:42,907 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=68.3 pTM=0.618 ipTM=0.185 tol=2.01 2024-05-06 13:20:52,914 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=68.5 pTM=0.617 ipTM=0.182 tol=1.33 2024-05-06 13:21:02,941 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=68.7 pTM=0.625 ipTM=0.201 tol=2.05 2024-05-06 13:21:12,951 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=68.8 pTM=0.62 ipTM=0.191 tol=2.41 2024-05-06 13:21:22,964 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=68.7 pTM=0.62 ipTM=0.191 tol=1.52 2024-05-06 13:21:32,965 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=68.7 pTM=0.623 ipTM=0.194 tol=1.66 2024-05-06 13:21:42,977 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=68.9 pTM=0.619 ipTM=0.188 tol=1.64 2024-05-06 13:21:52,975 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=68.9 pTM=0.618 ipTM=0.181 tol=3.47 2024-05-06 13:22:02,998 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=68.9 pTM=0.621 ipTM=0.19 tol=3.43 2024-05-06 13:22:13,023 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=68.9 pTM=0.617 ipTM=0.173 tol=4.55 2024-05-06 13:22:23,024 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=68.9 pTM=0.622 ipTM=0.196 tol=4.38 2024-05-06 13:22:23,025 alphafold2_multimer_v3_model_3_seed_000 took 310.5s (30 recycles) 2024-05-06 13:22:33,416 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=67.1 pTM=0.608 ipTM=0.199 2024-05-06 13:22:43,433 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=68.2 pTM=0.612 ipTM=0.211 tol=20 2024-05-06 13:22:53,452 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=69.1 pTM=0.615 ipTM=0.21 tol=12 2024-05-06 13:23:03,488 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=69.8 pTM=0.615 ipTM=0.204 tol=4.9 2024-05-06 13:23:13,501 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=70 pTM=0.618 ipTM=0.189 tol=4.82 2024-05-06 13:23:23,498 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=70.3 pTM=0.624 ipTM=0.229 tol=3.57 2024-05-06 13:23:33,491 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=70.3 pTM=0.622 ipTM=0.214 tol=2.98 2024-05-06 13:23:43,492 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=70.3 pTM=0.625 ipTM=0.222 tol=2.01 2024-05-06 13:23:53,492 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=70.6 pTM=0.625 ipTM=0.221 tol=1.95 2024-05-06 13:24:03,495 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=70.4 pTM=0.624 ipTM=0.219 tol=0.949 2024-05-06 13:24:13,520 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=70.8 pTM=0.629 ipTM=0.246 tol=1.1 2024-05-06 13:24:23,512 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=70.9 pTM=0.629 ipTM=0.301 tol=1.65 2024-05-06 13:24:33,529 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=70.8 pTM=0.626 ipTM=0.259 tol=1.7 2024-05-06 13:24:43,539 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=70.7 pTM=0.625 ipTM=0.244 tol=1.09 2024-05-06 13:24:53,550 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=70.8 pTM=0.628 ipTM=0.277 tol=1.25 2024-05-06 13:25:03,559 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=70.8 pTM=0.627 ipTM=0.25 tol=1.06 2024-05-06 13:25:13,569 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=70.8 pTM=0.626 ipTM=0.28 tol=0.598 2024-05-06 13:25:23,578 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=71.1 pTM=0.628 ipTM=0.303 tol=1.81 2024-05-06 13:25:33,581 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=70.8 pTM=0.628 ipTM=0.282 tol=1.03 2024-05-06 13:25:43,581 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=70.6 pTM=0.624 ipTM=0.248 tol=1.57 2024-05-06 13:25:53,599 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=70.8 pTM=0.626 ipTM=0.274 tol=1.24 2024-05-06 13:26:03,610 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=70.4 pTM=0.621 ipTM=0.234 tol=1.5 2024-05-06 13:26:13,638 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=70.8 pTM=0.626 ipTM=0.251 tol=1.41 2024-05-06 13:26:23,646 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=71.1 pTM=0.628 ipTM=0.287 tol=1.2 2024-05-06 13:26:33,657 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=70.9 pTM=0.627 ipTM=0.302 tol=1.25 2024-05-06 13:26:43,680 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=70.8 pTM=0.627 ipTM=0.254 tol=0.85 2024-05-06 13:26:53,691 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=70.8 pTM=0.626 ipTM=0.283 tol=1.38 2024-05-06 13:27:03,697 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=70.9 pTM=0.627 ipTM=0.288 tol=1.13 2024-05-06 13:27:13,715 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=70.8 pTM=0.627 ipTM=0.289 tol=1.04 2024-05-06 13:27:23,734 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=70.9 pTM=0.629 ipTM=0.271 tol=1.3 2024-05-06 13:27:33,749 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=70.9 pTM=0.628 ipTM=0.278 tol=1.28 2024-05-06 13:27:33,750 alphafold2_multimer_v3_model_4_seed_000 took 310.4s (30 recycles) 2024-05-06 13:27:44,121 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=66.9 pTM=0.613 ipTM=0.19 2024-05-06 13:27:54,177 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=67.6 pTM=0.615 ipTM=0.171 tol=13.5 2024-05-06 13:28:04,227 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=68 pTM=0.621 ipTM=0.305 tol=6.43 2024-05-06 13:28:14,285 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=68.3 pTM=0.619 ipTM=0.184 tol=3.91 2024-05-06 13:28:24,328 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=68.3 pTM=0.618 ipTM=0.169 tol=3.56 2024-05-06 13:28:34,368 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=68.4 pTM=0.625 ipTM=0.281 tol=3.85 2024-05-06 13:28:44,416 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=68.2 pTM=0.62 ipTM=0.186 tol=1.83 2024-05-06 13:28:54,469 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=68.5 pTM=0.62 ipTM=0.173 tol=2.28 2024-05-06 13:29:04,525 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=68.4 pTM=0.621 ipTM=0.177 tol=2.25 2024-05-06 13:29:14,569 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=68.4 pTM=0.62 ipTM=0.175 tol=1.86 2024-05-06 13:29:24,623 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=68.4 pTM=0.619 ipTM=0.17 tol=1.84 2024-05-06 13:29:34,658 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=68.5 pTM=0.622 ipTM=0.221 tol=1.73 2024-05-06 13:29:44,698 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=68.4 pTM=0.62 ipTM=0.195 tol=1.55 2024-05-06 13:29:54,738 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=68.4 pTM=0.62 ipTM=0.182 tol=2.05 2024-05-06 13:30:04,796 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=68.3 pTM=0.619 ipTM=0.176 tol=1.5 2024-05-06 13:30:14,856 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=68.3 pTM=0.618 ipTM=0.18 tol=2.13 2024-05-06 13:30:24,902 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=68.2 pTM=0.617 ipTM=0.178 tol=2.01 2024-05-06 13:30:34,947 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=68.4 pTM=0.623 ipTM=0.243 tol=1.46 2024-05-06 13:30:44,979 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=68.1 pTM=0.619 ipTM=0.186 tol=1.61 2024-05-06 13:30:55,004 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=68.2 pTM=0.62 ipTM=0.177 tol=2.45 2024-05-06 13:31:05,036 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=68.1 pTM=0.619 ipTM=0.178 tol=1.77 2024-05-06 13:31:15,077 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=68.1 pTM=0.62 ipTM=0.187 tol=2.25 2024-05-06 13:31:25,132 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=68.2 pTM=0.622 ipTM=0.189 tol=1.5 2024-05-06 13:31:35,188 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=68.2 pTM=0.62 ipTM=0.18 tol=1.9 2024-05-06 13:31:45,237 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=68.2 pTM=0.62 ipTM=0.184 tol=1.62 2024-05-06 13:31:55,289 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=68.4 pTM=0.623 ipTM=0.182 tol=1.65 2024-05-06 13:32:05,319 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=68.2 pTM=0.619 ipTM=0.18 tol=1.57 2024-05-06 13:32:15,348 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=68.3 pTM=0.619 ipTM=0.188 tol=1.84 2024-05-06 13:32:25,400 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=68.2 pTM=0.622 ipTM=0.177 tol=2.41 2024-05-06 13:32:35,458 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=68.3 pTM=0.622 ipTM=0.182 tol=2.29 2024-05-06 13:32:45,501 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=68.2 pTM=0.62 ipTM=0.181 tol=1.9 2024-05-06 13:32:45,502 alphafold2_multimer_v3_model_5_seed_000 took 311.4s (30 recycles) 2024-05-06 13:32:45,839 reranking models by 'multimer' metric 2024-05-06 13:32:48,714 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-05-06 13:33:25,272 Relaxation took 39.4s 2024-05-06 13:33:25,273 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=70.9 pTM=0.628 ipTM=0.278 2024-05-06 13:34:33,632 Relaxation took 68.4s 2024-05-06 13:34:33,632 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=70.1 pTM=0.622 ipTM=0.225 2024-05-06 13:35:27,464 Relaxation took 53.8s 2024-05-06 13:35:27,464 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=68.9 pTM=0.622 ipTM=0.196 2024-05-06 13:36:37,336 Relaxation took 69.9s 2024-05-06 13:36:37,336 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=68.2 pTM=0.62 ipTM=0.181 2024-05-06 13:37:40,807 Relaxation took 63.5s 2024-05-06 13:37:40,807 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=68.6 pTM=0.602 ipTM=0.166 2024-05-06 13:37:42,265 Done