2024-05-06 13:18:15,747 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-05-06 13:18:16,049 Running on GPU
2024-05-06 13:18:21,041 Found 6 citations for tools or databases
2024-05-06 13:18:21,041 Query 1/1: BNIP3_SKP2 (length 618)
2024-05-06 13:18:21,611 Sleeping for 5s. Reason: PENDING
2024-05-06 13:18:27,023 Sleeping for 7s. Reason: RUNNING
2024-05-06 13:18:34,451 Sleeping for 7s. Reason: RUNNING
2024-05-06 13:18:41,860 Sleeping for 8s. Reason: RUNNING
2024-05-06 13:18:50,296 Sleeping for 8s. Reason: RUNNING
2024-05-06 13:18:59,267 Sleeping for 8s. Reason: RUNNING
2024-05-06 13:19:07,697 Sleeping for 5s. Reason: RUNNING
2024-05-06 13:19:13,121 Sleeping for 6s. Reason: RUNNING
2024-05-06 13:19:22,175 Sleeping for 9s. Reason: PENDING
2024-05-06 13:19:31,609 Sleeping for 8s. Reason: RUNNING
2024-05-06 13:19:40,028 Sleeping for 8s. Reason: RUNNING
2024-05-06 13:19:48,449 Sleeping for 10s. Reason: RUNNING
2024-05-06 13:20:01,048 Setting max_seq=508, max_extra_seq=2048
2024-05-06 13:22:37,884 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=60.5 pTM=0.57 ipTM=0.175
2024-05-06 13:22:45,826 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=61.3 pTM=0.573 ipTM=0.174 tol=7.2
2024-05-06 13:22:53,779 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=62 pTM=0.573 ipTM=0.169 tol=3.96
2024-05-06 13:23:01,730 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=62.2 pTM=0.574 ipTM=0.17 tol=3.86
2024-05-06 13:23:09,686 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=62.3 pTM=0.576 ipTM=0.176 tol=3.29
2024-05-06 13:23:17,641 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=62.2 pTM=0.574 ipTM=0.169 tol=2.62
2024-05-06 13:23:25,610 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=62.5 pTM=0.576 ipTM=0.174 tol=2.46
2024-05-06 13:23:33,581 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=62.3 pTM=0.574 ipTM=0.17 tol=3.7
2024-05-06 13:23:41,550 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=62.4 pTM=0.573 ipTM=0.168 tol=3.81
2024-05-06 13:23:49,523 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=62.6 pTM=0.571 ipTM=0.162 tol=2.6
2024-05-06 13:23:57,496 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=62.6 pTM=0.574 ipTM=0.171 tol=1.8
2024-05-06 13:24:05,485 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=62.4 pTM=0.572 ipTM=0.166 tol=1.73
2024-05-06 13:24:13,484 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=62.6 pTM=0.574 ipTM=0.171 tol=2.35
2024-05-06 13:24:21,476 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=62.4 pTM=0.574 ipTM=0.17 tol=3.97
2024-05-06 13:24:29,464 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=62.3 pTM=0.577 ipTM=0.178 tol=3.06
2024-05-06 13:24:37,464 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=62.5 pTM=0.577 ipTM=0.177 tol=2.63
2024-05-06 13:24:45,462 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=62.8 pTM=0.58 ipTM=0.186 tol=2.03
2024-05-06 13:24:53,460 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=62.6 pTM=0.578 ipTM=0.188 tol=1.31
2024-05-06 13:25:01,455 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=62.4 pTM=0.581 ipTM=0.2 tol=1.32
2024-05-06 13:25:09,456 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=62.4 pTM=0.579 ipTM=0.207 tol=1.23
2024-05-06 13:25:17,451 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=62.4 pTM=0.582 ipTM=0.204 tol=2.28
2024-05-06 13:25:25,452 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=62.3 pTM=0.581 ipTM=0.21 tol=2.03
2024-05-06 13:25:33,449 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=62.4 pTM=0.583 ipTM=0.214 tol=1.88
2024-05-06 13:25:41,448 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=62.4 pTM=0.578 ipTM=0.202 tol=1.72
2024-05-06 13:25:49,448 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=62.4 pTM=0.581 ipTM=0.21 tol=1.24
2024-05-06 13:25:57,448 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=62.5 pTM=0.579 ipTM=0.2 tol=1.21
2024-05-06 13:26:05,441 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=62.3 pTM=0.581 ipTM=0.203 tol=1.48
2024-05-06 13:26:13,435 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=62.4 pTM=0.579 ipTM=0.212 tol=1.66
2024-05-06 13:26:21,434 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=62.4 pTM=0.581 ipTM=0.205 tol=1.28
2024-05-06 13:26:29,435 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=62.2 pTM=0.578 ipTM=0.198 tol=1.53
2024-05-06 13:26:37,435 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=62.4 pTM=0.582 ipTM=0.203 tol=1.88
2024-05-06 13:26:37,435 alphafold2_multimer_v3_model_1_seed_000 took 388.0s (30 recycles)
2024-05-06 13:26:45,695 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=61.8 pTM=0.575 ipTM=0.178
2024-05-06 13:26:53,719 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=62.5 pTM=0.575 ipTM=0.162 tol=6.39
2024-05-06 13:27:01,744 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=62.6 pTM=0.58 ipTM=0.176 tol=9.05
2024-05-06 13:27:09,766 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=62.8 pTM=0.585 ipTM=0.213 tol=4.77
2024-05-06 13:27:17,785 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=63 pTM=0.587 ipTM=0.199 tol=3.85
2024-05-06 13:27:25,808 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=63.8 pTM=0.603 ipTM=0.538 tol=4.46
2024-05-06 13:27:33,831 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=63.6 pTM=0.591 ipTM=0.235 tol=2.19
2024-05-06 13:27:41,854 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=63.4 pTM=0.583 ipTM=0.186 tol=2.35
2024-05-06 13:27:49,878 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=63.5 pTM=0.583 ipTM=0.19 tol=2.29
2024-05-06 13:27:57,907 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=63.6 pTM=0.582 ipTM=0.191 tol=1.87
2024-05-06 13:28:05,934 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=63.5 pTM=0.582 ipTM=0.184 tol=1.7
2024-05-06 13:28:13,970 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=63.4 pTM=0.581 ipTM=0.204 tol=2.16
2024-05-06 13:28:21,996 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=63.5 pTM=0.58 ipTM=0.176 tol=2.41
2024-05-06 13:28:30,014 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=63.4 pTM=0.582 ipTM=0.189 tol=1.84
2024-05-06 13:28:38,039 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=63.4 pTM=0.583 ipTM=0.198 tol=1.99
2024-05-06 13:28:46,063 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=63.6 pTM=0.588 ipTM=0.271 tol=2.55
2024-05-06 13:28:54,085 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=64 pTM=0.589 ipTM=0.254 tol=1.39
2024-05-06 13:29:02,107 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=63.8 pTM=0.584 ipTM=0.194 tol=1.84
2024-05-06 13:29:10,132 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=63.8 pTM=0.585 ipTM=0.207 tol=1.52
2024-05-06 13:29:18,150 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=63.8 pTM=0.583 ipTM=0.207 tol=1.76
2024-05-06 13:29:26,163 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=63.8 pTM=0.583 ipTM=0.189 tol=2.41
2024-05-06 13:29:34,183 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=63.9 pTM=0.586 ipTM=0.226 tol=2.38
2024-05-06 13:29:42,200 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=63.9 pTM=0.582 ipTM=0.185 tol=1.72
2024-05-06 13:29:50,213 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=63.8 pTM=0.582 ipTM=0.187 tol=2.4
2024-05-06 13:29:58,235 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=63.8 pTM=0.583 ipTM=0.193 tol=2.42
2024-05-06 13:30:06,255 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=63.8 pTM=0.583 ipTM=0.188 tol=2
2024-05-06 13:30:14,276 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=63.8 pTM=0.584 ipTM=0.194 tol=2.89
2024-05-06 13:30:22,298 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=63.8 pTM=0.582 ipTM=0.185 tol=1.58
2024-05-06 13:30:30,324 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=63.6 pTM=0.583 ipTM=0.19 tol=3.23
2024-05-06 13:30:38,347 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=63.6 pTM=0.583 ipTM=0.19 tol=2.97
2024-05-06 13:30:46,376 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=63.7 pTM=0.583 ipTM=0.19 tol=1.73
2024-05-06 13:30:46,376 alphafold2_multimer_v3_model_2_seed_000 took 248.7s (30 recycles)
2024-05-06 13:30:54,670 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=60.9 pTM=0.558 ipTM=0.142
2024-05-06 13:31:02,705 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=62.3 pTM=0.585 ipTM=0.294 tol=17.5
2024-05-06 13:31:10,745 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=62 pTM=0.594 ipTM=0.295 tol=8.37
2024-05-06 13:31:18,786 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=61.5 pTM=0.583 ipTM=0.197 tol=4.64
2024-05-06 13:31:26,824 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=61.6 pTM=0.584 ipTM=0.211 tol=3.08
2024-05-06 13:31:34,858 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=61.9 pTM=0.59 ipTM=0.218 tol=2.2
2024-05-06 13:31:42,895 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=61.7 pTM=0.582 ipTM=0.213 tol=3.38
2024-05-06 13:31:50,930 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=62.4 pTM=0.593 ipTM=0.23 tol=2.88
2024-05-06 13:31:58,963 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=62 pTM=0.581 ipTM=0.21 tol=2.17
2024-05-06 13:32:06,997 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=62.1 pTM=0.585 ipTM=0.205 tol=2.11
2024-05-06 13:32:15,031 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=62 pTM=0.583 ipTM=0.204 tol=1.95
2024-05-06 13:32:23,062 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=62.2 pTM=0.587 ipTM=0.211 tol=2.23
2024-05-06 13:32:31,102 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=62.2 pTM=0.585 ipTM=0.246 tol=2.7
2024-05-06 13:32:39,135 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=62.3 pTM=0.594 ipTM=0.273 tol=2.72
2024-05-06 13:32:47,169 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=62.1 pTM=0.589 ipTM=0.215 tol=2.79
2024-05-06 13:32:55,198 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=62.5 pTM=0.595 ipTM=0.271 tol=2.57
2024-05-06 13:33:03,232 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=62.2 pTM=0.588 ipTM=0.21 tol=2.17
2024-05-06 13:33:11,259 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=62.2 pTM=0.585 ipTM=0.203 tol=1.4
2024-05-06 13:33:19,290 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=62.3 pTM=0.587 ipTM=0.222 tol=2.47
2024-05-06 13:33:27,327 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=62.5 pTM=0.594 ipTM=0.278 tol=3.37
2024-05-06 13:33:35,358 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=62.2 pTM=0.588 ipTM=0.214 tol=3.11
2024-05-06 13:33:43,383 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=62.1 pTM=0.585 ipTM=0.216 tol=2.59
2024-05-06 13:33:51,407 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=62.1 pTM=0.59 ipTM=0.231 tol=6.84
2024-05-06 13:33:59,440 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=61.9 pTM=0.582 ipTM=0.19 tol=3.41
2024-05-06 13:34:07,469 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=62.2 pTM=0.586 ipTM=0.209 tol=4.12
2024-05-06 13:34:15,491 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=62.1 pTM=0.583 ipTM=0.2 tol=3.25
2024-05-06 13:34:23,530 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=62.3 pTM=0.588 ipTM=0.216 tol=1.38
2024-05-06 13:34:31,560 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=62.3 pTM=0.585 ipTM=0.229 tol=2.42
2024-05-06 13:34:39,592 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=62.6 pTM=0.594 ipTM=0.248 tol=1.75
2024-05-06 13:34:47,617 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=62.6 pTM=0.592 ipTM=0.252 tol=1.81
2024-05-06 13:34:55,645 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=62.8 pTM=0.598 ipTM=0.253 tol=1.79
2024-05-06 13:34:55,646 alphafold2_multimer_v3_model_3_seed_000 took 249.0s (30 recycles)
2024-05-06 13:35:03,921 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=60.8 pTM=0.581 ipTM=0.291
2024-05-06 13:35:11,965 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=61.9 pTM=0.578 ipTM=0.238 tol=10.9
2024-05-06 13:35:20,002 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=62.2 pTM=0.578 ipTM=0.276 tol=12.1
2024-05-06 13:35:28,036 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=61.9 pTM=0.564 ipTM=0.158 tol=6.92
2024-05-06 13:35:36,070 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=62.4 pTM=0.574 ipTM=0.19 tol=4.44
2024-05-06 13:35:44,098 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=62.8 pTM=0.571 ipTM=0.202 tol=2.91
2024-05-06 13:35:52,128 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=63.2 pTM=0.58 ipTM=0.212 tol=3.05
2024-05-06 13:36:00,153 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=63.8 pTM=0.586 ipTM=0.299 tol=5.58
2024-05-06 13:36:08,177 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=63.8 pTM=0.589 ipTM=0.236 tol=1.9
2024-05-06 13:36:16,206 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=63.6 pTM=0.583 ipTM=0.226 tol=1.8
2024-05-06 13:36:24,233 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=63.8 pTM=0.588 ipTM=0.244 tol=1.97
2024-05-06 13:36:32,259 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=63.3 pTM=0.578 ipTM=0.192 tol=1.77
2024-05-06 13:36:40,289 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=63.7 pTM=0.587 ipTM=0.219 tol=1.53
2024-05-06 13:36:48,315 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=63.2 pTM=0.577 ipTM=0.193 tol=1.57
2024-05-06 13:36:56,342 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=63.2 pTM=0.584 ipTM=0.211 tol=2.03
2024-05-06 13:37:04,369 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=63.2 pTM=0.578 ipTM=0.231 tol=3.5
2024-05-06 13:37:12,399 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=63.4 pTM=0.588 ipTM=0.215 tol=1.7
2024-05-06 13:37:20,432 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=63.1 pTM=0.578 ipTM=0.212 tol=3.35
2024-05-06 13:37:28,461 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=63.1 pTM=0.587 ipTM=0.22 tol=2.37
2024-05-06 13:37:36,493 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=63.1 pTM=0.581 ipTM=0.207 tol=3.34
2024-05-06 13:37:44,513 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=63.1 pTM=0.584 ipTM=0.209 tol=3.09
2024-05-06 13:37:52,536 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=63 pTM=0.58 ipTM=0.214 tol=1.65
2024-05-06 13:38:00,566 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=63 pTM=0.584 ipTM=0.21 tol=2.03
2024-05-06 13:38:08,599 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=63.1 pTM=0.577 ipTM=0.194 tol=2.67
2024-05-06 13:38:16,628 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=63.2 pTM=0.587 ipTM=0.233 tol=2.09
2024-05-06 13:38:24,660 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=63.2 pTM=0.582 ipTM=0.253 tol=2.88
2024-05-06 13:38:32,691 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=63 pTM=0.587 ipTM=0.216 tol=2.64
2024-05-06 13:38:40,732 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=63.1 pTM=0.576 ipTM=0.199 tol=2.65
2024-05-06 13:38:48,768 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=63.1 pTM=0.584 ipTM=0.214 tol=3.25
2024-05-06 13:38:56,801 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=63 pTM=0.578 ipTM=0.196 tol=2.52
2024-05-06 13:39:04,840 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=63 pTM=0.584 ipTM=0.215 tol=2.15
2024-05-06 13:39:04,841 alphafold2_multimer_v3_model_4_seed_000 took 248.9s (30 recycles)
2024-05-06 13:39:13,116 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=60.2 pTM=0.558 ipTM=0.139
2024-05-06 13:39:21,165 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=60.8 pTM=0.558 ipTM=0.146 tol=11.1
2024-05-06 13:39:29,213 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=61.3 pTM=0.56 ipTM=0.142 tol=5.32
2024-05-06 13:39:37,260 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=61.4 pTM=0.562 ipTM=0.147 tol=6.08
2024-05-06 13:39:45,305 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=61.8 pTM=0.567 ipTM=0.149 tol=5.95
2024-05-06 13:39:53,347 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=61.9 pTM=0.57 ipTM=0.165 tol=3.65
2024-05-06 13:40:01,390 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=62.1 pTM=0.571 ipTM=0.183 tol=2.5
2024-05-06 13:40:09,437 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=62.2 pTM=0.575 ipTM=0.186 tol=2.79
2024-05-06 13:40:17,481 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=62 pTM=0.57 ipTM=0.158 tol=2.78
2024-05-06 13:40:25,524 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=62.2 pTM=0.573 ipTM=0.186 tol=2.75
2024-05-06 13:40:33,565 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=62.2 pTM=0.573 ipTM=0.182 tol=1.95
2024-05-06 13:40:41,606 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=62.2 pTM=0.576 ipTM=0.204 tol=2.34
2024-05-06 13:40:49,655 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=62.2 pTM=0.574 ipTM=0.178 tol=1.93
2024-05-06 13:40:57,697 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=62.2 pTM=0.579 ipTM=0.223 tol=2.21
2024-05-06 13:41:05,738 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=62.2 pTM=0.579 ipTM=0.2 tol=1.89
2024-05-06 13:41:13,775 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=62.4 pTM=0.581 ipTM=0.22 tol=2.18
2024-05-06 13:41:21,815 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=62.3 pTM=0.579 ipTM=0.2 tol=2.17
2024-05-06 13:41:29,857 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=62.3 pTM=0.579 ipTM=0.188 tol=2.09
2024-05-06 13:41:37,901 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=62.1 pTM=0.575 ipTM=0.182 tol=2.08
2024-05-06 13:41:45,945 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=62.4 pTM=0.579 ipTM=0.238 tol=1.94
2024-05-06 13:41:53,985 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=62.4 pTM=0.582 ipTM=0.252 tol=2.27
2024-05-06 13:42:02,025 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=62.2 pTM=0.58 ipTM=0.196 tol=2.24
2024-05-06 13:42:10,077 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=62.3 pTM=0.58 ipTM=0.2 tol=2.18
2024-05-06 13:42:18,125 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=62.3 pTM=0.581 ipTM=0.194 tol=1.98
2024-05-06 13:42:26,171 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=62.3 pTM=0.579 ipTM=0.198 tol=2.54
2024-05-06 13:42:34,206 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=62.5 pTM=0.581 ipTM=0.213 tol=3.09
2024-05-06 13:42:42,249 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=62.4 pTM=0.578 ipTM=0.187 tol=3.24
2024-05-06 13:42:50,292 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=62.3 pTM=0.579 ipTM=0.228 tol=2.75
2024-05-06 13:42:58,338 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=62.4 pTM=0.577 ipTM=0.195 tol=2.39
2024-05-06 13:43:06,382 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=62.4 pTM=0.58 ipTM=0.219 tol=2.03
2024-05-06 13:43:14,428 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=62.4 pTM=0.579 ipTM=0.194 tol=2.41
2024-05-06 13:43:14,428 alphafold2_multimer_v3_model_5_seed_000 took 249.3s (30 recycles)
2024-05-06 13:43:14,683 reranking models by 'multimer' metric
2024-05-06 13:43:16,623 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-05-06 13:44:03,364 Relaxation took 48.7s
2024-05-06 13:44:03,364 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=62.8 pTM=0.598 ipTM=0.253
2024-05-06 13:44:28,472 Relaxation took 25.1s
2024-05-06 13:44:28,473 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=63 pTM=0.584 ipTM=0.215
2024-05-06 13:45:03,920 Relaxation took 35.4s
2024-05-06 13:45:03,921 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=62.4 pTM=0.582 ipTM=0.203
2024-05-06 13:45:24,385 Relaxation took 20.5s
2024-05-06 13:45:24,386 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=62.4 pTM=0.579 ipTM=0.194
2024-05-06 13:45:57,956 Relaxation took 33.6s
2024-05-06 13:45:57,956 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=63.7 pTM=0.583 ipTM=0.19
2024-05-06 13:45:59,217 Done