2024-05-06 14:20:22,125 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-05-06 14:20:22,492 Running on GPU
2024-05-06 14:20:26,151 Found 6 citations for tools or databases
2024-05-06 14:20:26,151 Query 1/1: CDK2AP1_FBXO41 (length 990)
2024-05-06 14:20:30,305 Setting max_seq=508, max_extra_seq=2048
2024-05-06 14:24:02,555 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=52.9 pTM=0.415 ipTM=0.224
2024-05-06 14:24:28,010 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=53.7 pTM=0.412 ipTM=0.217 tol=13
2024-05-06 14:24:53,504 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=53.8 pTM=0.415 ipTM=0.215 tol=9.41
2024-05-06 14:25:19,061 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=53.5 pTM=0.414 ipTM=0.186 tol=7.93
2024-05-06 14:25:44,645 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=53.8 pTM=0.412 ipTM=0.196 tol=6.12
2024-05-06 14:26:10,247 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=53.9 pTM=0.411 ipTM=0.193 tol=3.4
2024-05-06 14:26:35,876 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=54 pTM=0.411 ipTM=0.195 tol=2.49
2024-05-06 14:27:01,498 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=53.2 pTM=0.411 ipTM=0.182 tol=5.72
2024-05-06 14:27:27,141 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=53.6 pTM=0.411 ipTM=0.196 tol=5.43
2024-05-06 14:27:52,799 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=53.5 pTM=0.41 ipTM=0.19 tol=2.94
2024-05-06 14:28:18,470 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=53.8 pTM=0.408 ipTM=0.208 tol=3.54
2024-05-06 14:28:44,155 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=53.2 pTM=0.408 ipTM=0.201 tol=3.68
2024-05-06 14:29:09,849 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=53.9 pTM=0.408 ipTM=0.199 tol=4.95
2024-05-06 14:29:35,546 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=53.8 pTM=0.407 ipTM=0.199 tol=6.07
2024-05-06 14:30:01,249 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=53.9 pTM=0.406 ipTM=0.196 tol=7.93
2024-05-06 14:30:26,923 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=53.6 pTM=0.408 ipTM=0.211 tol=7.09
2024-05-06 14:30:52,598 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=54.2 pTM=0.408 ipTM=0.195 tol=4.89
2024-05-06 14:31:18,275 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=53.8 pTM=0.408 ipTM=0.187 tol=4.26
2024-05-06 14:31:43,947 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=54 pTM=0.407 ipTM=0.183 tol=3.56
2024-05-06 14:32:09,616 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=53.7 pTM=0.409 ipTM=0.177 tol=4.5
2024-05-06 14:32:35,301 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=53.7 pTM=0.409 ipTM=0.174 tol=4.59
2024-05-06 14:33:00,977 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=53.9 pTM=0.409 ipTM=0.178 tol=3.42
2024-05-06 14:33:26,671 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=54.2 pTM=0.408 ipTM=0.169 tol=3.4
2024-05-06 14:33:52,364 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=53.7 pTM=0.409 ipTM=0.181 tol=3.46
2024-05-06 14:34:18,056 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=54.1 pTM=0.407 ipTM=0.167 tol=4.62
2024-05-06 14:34:43,748 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=53.7 pTM=0.408 ipTM=0.177 tol=5.33
2024-05-06 14:35:09,446 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=53.9 pTM=0.406 ipTM=0.17 tol=6.14
2024-05-06 14:35:35,144 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=54.6 pTM=0.434 ipTM=0.42 tol=6.89
2024-05-06 14:36:00,823 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=54.2 pTM=0.433 ipTM=0.389 tol=7.71
2024-05-06 14:36:26,516 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=53.8 pTM=0.424 ipTM=0.316 tol=3.38
2024-05-06 14:36:52,213 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=53.2 pTM=0.412 ipTM=0.211 tol=4.53
2024-05-06 14:36:52,213 alphafold2_multimer_v3_model_1_seed_000 took 972.4s (30 recycles)
2024-05-06 14:37:18,651 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=52.9 pTM=0.414 ipTM=0.257
2024-05-06 14:37:44,368 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=53.2 pTM=0.414 ipTM=0.235 tol=12
2024-05-06 14:38:10,090 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=53.5 pTM=0.412 ipTM=0.196 tol=13.1
2024-05-06 14:38:35,832 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=53.5 pTM=0.411 ipTM=0.189 tol=6.52
2024-05-06 14:39:01,590 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=53.7 pTM=0.409 ipTM=0.178 tol=7.5
2024-05-06 14:39:27,332 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=53.1 pTM=0.408 ipTM=0.175 tol=10.6
2024-05-06 14:39:53,103 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=52.9 pTM=0.409 ipTM=0.19 tol=5.35
2024-05-06 14:40:18,921 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=52.2 pTM=0.41 ipTM=0.174 tol=4.93
2024-05-06 14:40:44,819 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=52.6 pTM=0.41 ipTM=0.18 tol=5.18
2024-05-06 14:41:10,744 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=52.7 pTM=0.408 ipTM=0.188 tol=4.62
2024-05-06 14:41:36,640 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=52.9 pTM=0.407 ipTM=0.2 tol=7.58
2024-05-06 14:42:02,536 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=52.7 pTM=0.408 ipTM=0.236 tol=5.39
2024-05-06 14:42:28,370 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=52.8 pTM=0.408 ipTM=0.2 tol=5.07
2024-05-06 14:42:54,211 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=52.8 pTM=0.407 ipTM=0.175 tol=4.78
2024-05-06 14:43:20,045 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=52.9 pTM=0.408 ipTM=0.177 tol=3.96
2024-05-06 14:43:45,871 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=52.6 pTM=0.409 ipTM=0.183 tol=3.21
2024-05-06 14:44:11,682 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=52.9 pTM=0.408 ipTM=0.179 tol=3.55
2024-05-06 14:44:37,487 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=54 pTM=0.407 ipTM=0.371 tol=6.15
2024-05-06 14:45:03,300 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=53.2 pTM=0.409 ipTM=0.246 tol=4.2
2024-05-06 14:45:29,110 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=53.2 pTM=0.407 ipTM=0.212 tol=2.7
2024-05-06 14:45:54,927 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=52.7 pTM=0.408 ipTM=0.172 tol=3.46
2024-05-06 14:46:20,739 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=53.1 pTM=0.407 ipTM=0.179 tol=4.12
2024-05-06 14:46:46,559 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=53.2 pTM=0.406 ipTM=0.197 tol=4.29
2024-05-06 14:47:12,388 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=53.3 pTM=0.407 ipTM=0.187 tol=3.75
2024-05-06 14:47:38,206 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=53.1 pTM=0.407 ipTM=0.191 tol=4.17
2024-05-06 14:48:04,017 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=53 pTM=0.406 ipTM=0.174 tol=3.99
2024-05-06 14:48:29,839 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=53.8 pTM=0.407 ipTM=0.366 tol=7.03
2024-05-06 14:48:55,679 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=52.9 pTM=0.408 ipTM=0.218 tol=5.25
2024-05-06 14:49:21,467 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=53.1 pTM=0.408 ipTM=0.21 tol=5.19
2024-05-06 14:49:47,279 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=52.7 pTM=0.407 ipTM=0.213 tol=4.08
2024-05-06 14:50:13,094 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=53 pTM=0.408 ipTM=0.228 tol=2.74
2024-05-06 14:50:13,095 alphafold2_multimer_v3_model_2_seed_000 took 800.1s (30 recycles)
2024-05-06 14:50:39,656 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=52.7 pTM=0.419 ipTM=0.203
2024-05-06 14:51:05,478 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=53.8 pTM=0.424 ipTM=0.2 tol=10.3
2024-05-06 14:51:31,282 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=53.5 pTM=0.425 ipTM=0.193 tol=7.82
2024-05-06 14:51:57,099 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=53.5 pTM=0.417 ipTM=0.179 tol=6.3
2024-05-06 14:52:22,923 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=53.5 pTM=0.417 ipTM=0.182 tol=3.79
2024-05-06 14:52:48,750 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=53.1 pTM=0.415 ipTM=0.176 tol=3.66
2024-05-06 14:53:14,570 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=53.6 pTM=0.415 ipTM=0.177 tol=3.14
2024-05-06 14:53:40,392 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=53 pTM=0.414 ipTM=0.174 tol=2.36
2024-05-06 14:54:06,229 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=53.3 pTM=0.414 ipTM=0.193 tol=2.74
2024-05-06 14:54:32,072 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=53.1 pTM=0.412 ipTM=0.18 tol=2
2024-05-06 14:54:57,911 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=53.3 pTM=0.41 ipTM=0.173 tol=3.31
2024-05-06 14:55:23,750 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=53.1 pTM=0.413 ipTM=0.177 tol=2.72
2024-05-06 14:55:49,583 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=53.6 pTM=0.412 ipTM=0.189 tol=2.27
2024-05-06 14:56:15,419 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=53.2 pTM=0.411 ipTM=0.174 tol=2.89
2024-05-06 14:56:41,262 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=53.5 pTM=0.413 ipTM=0.216 tol=4.94
2024-05-06 14:57:07,086 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=53.1 pTM=0.415 ipTM=0.174 tol=3.39
2024-05-06 14:57:32,912 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=53.5 pTM=0.413 ipTM=0.212 tol=3.33
2024-05-06 14:57:58,752 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=53.1 pTM=0.412 ipTM=0.171 tol=3.08
2024-05-06 14:58:24,587 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=53.2 pTM=0.412 ipTM=0.204 tol=3.64
2024-05-06 14:58:50,423 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=53.3 pTM=0.41 ipTM=0.183 tol=3.29
2024-05-06 14:59:16,262 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=53.3 pTM=0.411 ipTM=0.193 tol=3.88
2024-05-06 14:59:42,088 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=53.5 pTM=0.412 ipTM=0.199 tol=2.47
2024-05-06 15:00:07,929 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=53.4 pTM=0.41 ipTM=0.196 tol=2.69
2024-05-06 15:00:33,770 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=53.2 pTM=0.412 ipTM=0.175 tol=2.73
2024-05-06 15:00:59,609 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=53.5 pTM=0.411 ipTM=0.209 tol=3.1
2024-05-06 15:01:25,453 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=53.6 pTM=0.412 ipTM=0.196 tol=3.62
2024-05-06 15:01:51,274 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=53.7 pTM=0.413 ipTM=0.199 tol=6.51
2024-05-06 15:02:17,120 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=53.9 pTM=0.411 ipTM=0.213 tol=3.74
2024-05-06 15:02:42,945 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=53.6 pTM=0.412 ipTM=0.193 tol=2.48
2024-05-06 15:03:08,792 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=53.2 pTM=0.412 ipTM=0.174 tol=2.73
2024-05-06 15:03:34,635 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=53.3 pTM=0.414 ipTM=0.206 tol=2.55
2024-05-06 15:03:34,636 alphafold2_multimer_v3_model_3_seed_000 took 800.8s (30 recycles)
2024-05-06 15:04:01,154 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=49.3 pTM=0.415 ipTM=0.274
2024-05-06 15:04:26,997 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=49.1 pTM=0.404 ipTM=0.211 tol=15.8
2024-05-06 15:04:52,853 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=49.4 pTM=0.403 ipTM=0.215 tol=9.93
2024-05-06 15:05:18,730 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=49.9 pTM=0.397 ipTM=0.189 tol=13.9
2024-05-06 15:05:44,605 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=50 pTM=0.4 ipTM=0.173 tol=15.3
2024-05-06 15:06:10,478 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=49.8 pTM=0.398 ipTM=0.193 tol=9.78
2024-05-06 15:06:36,337 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=50.3 pTM=0.397 ipTM=0.179 tol=6.12
2024-05-06 15:07:02,200 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=49.8 pTM=0.399 ipTM=0.185 tol=8.1
2024-05-06 15:07:28,057 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=49.8 pTM=0.398 ipTM=0.191 tol=5.7
2024-05-06 15:07:53,904 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=49.8 pTM=0.399 ipTM=0.196 tol=6.41
2024-05-06 15:08:19,759 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=50 pTM=0.397 ipTM=0.199 tol=7.51
2024-05-06 15:08:45,606 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=49.7 pTM=0.4 ipTM=0.204 tol=4.39
2024-05-06 15:09:11,435 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=49.7 pTM=0.4 ipTM=0.208 tol=3.97
2024-05-06 15:09:37,264 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=49.7 pTM=0.399 ipTM=0.199 tol=3.53
2024-05-06 15:10:03,089 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=49.9 pTM=0.399 ipTM=0.192 tol=3.59
2024-05-06 15:10:28,907 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=49.6 pTM=0.4 ipTM=0.202 tol=3.45
2024-05-06 15:10:54,760 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=49.6 pTM=0.398 ipTM=0.206 tol=2.63
2024-05-06 15:11:20,571 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=49.6 pTM=0.401 ipTM=0.19 tol=5.68
2024-05-06 15:11:46,415 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=50.1 pTM=0.397 ipTM=0.185 tol=5.51
2024-05-06 15:12:12,252 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=49.9 pTM=0.399 ipTM=0.184 tol=4.62
2024-05-06 15:12:38,098 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=49.7 pTM=0.399 ipTM=0.192 tol=4.51
2024-05-06 15:13:03,926 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=49.6 pTM=0.402 ipTM=0.191 tol=4.29
2024-05-06 15:13:29,761 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=49.8 pTM=0.398 ipTM=0.188 tol=7.35
2024-05-06 15:13:55,602 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=50 pTM=0.4 ipTM=0.183 tol=6.91
2024-05-06 15:14:21,421 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=49.7 pTM=0.399 ipTM=0.186 tol=2.96
2024-05-06 15:14:47,259 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=49.8 pTM=0.4 ipTM=0.188 tol=2.99
2024-05-06 15:15:13,104 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=49.8 pTM=0.4 ipTM=0.181 tol=2.26
2024-05-06 15:15:38,937 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=49.8 pTM=0.4 ipTM=0.187 tol=5.13
2024-05-06 15:16:04,769 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=49.5 pTM=0.4 ipTM=0.187 tol=5.18
2024-05-06 15:16:30,607 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=49.6 pTM=0.402 ipTM=0.188 tol=3.41
2024-05-06 15:16:56,452 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=49.7 pTM=0.401 ipTM=0.192 tol=3.15
2024-05-06 15:16:56,453 alphafold2_multimer_v3_model_4_seed_000 took 801.1s (30 recycles)
2024-05-06 15:17:23,022 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=51.4 pTM=0.425 ipTM=0.245
2024-05-06 15:17:48,803 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=51.6 pTM=0.427 ipTM=0.25 tol=10.1
2024-05-06 15:18:14,594 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=52 pTM=0.422 ipTM=0.227 tol=8.23
2024-05-06 15:18:40,423 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=52.2 pTM=0.416 ipTM=0.221 tol=9.18
2024-05-06 15:19:06,241 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=52.6 pTM=0.417 ipTM=0.221 tol=6.45
2024-05-06 15:19:32,043 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=52.5 pTM=0.418 ipTM=0.227 tol=8.71
2024-05-06 15:19:57,852 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=53 pTM=0.416 ipTM=0.219 tol=6.68
2024-05-06 15:20:23,653 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=52.2 pTM=0.421 ipTM=0.235 tol=7.99
2024-05-06 15:20:49,480 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=52.5 pTM=0.418 ipTM=0.232 tol=5.37
2024-05-06 15:21:15,284 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=52.2 pTM=0.42 ipTM=0.24 tol=11.3
2024-05-06 15:21:41,115 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=52.7 pTM=0.417 ipTM=0.222 tol=10.5
2024-05-06 15:22:06,929 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=52.1 pTM=0.419 ipTM=0.229 tol=5.27
2024-05-06 15:22:32,731 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=52.2 pTM=0.421 ipTM=0.218 tol=12.8
2024-05-06 15:22:58,565 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=52.2 pTM=0.417 ipTM=0.221 tol=10.3
2024-05-06 15:23:24,388 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=52.2 pTM=0.418 ipTM=0.216 tol=6.36
2024-05-06 15:23:50,209 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=52.2 pTM=0.418 ipTM=0.226 tol=5.36
2024-05-06 15:24:16,023 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=52.1 pTM=0.418 ipTM=0.215 tol=9.83
2024-05-06 15:24:41,855 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=52.3 pTM=0.417 ipTM=0.22 tol=10.2
2024-05-06 15:25:07,681 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=52.3 pTM=0.416 ipTM=0.219 tol=4.89
2024-05-06 15:25:33,507 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=52.1 pTM=0.417 ipTM=0.22 tol=3.03
2024-05-06 15:25:59,328 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=52.1 pTM=0.417 ipTM=0.208 tol=4.2
2024-05-06 15:26:25,154 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=52 pTM=0.416 ipTM=0.217 tol=8.33
2024-05-06 15:26:50,966 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=52.5 pTM=0.417 ipTM=0.207 tol=8.01
2024-05-06 15:27:16,783 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=52.2 pTM=0.417 ipTM=0.22 tol=5.29
2024-05-06 15:27:42,594 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=52.5 pTM=0.416 ipTM=0.208 tol=5.39
2024-05-06 15:28:08,414 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=52.4 pTM=0.416 ipTM=0.219 tol=5.33
2024-05-06 15:28:34,228 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=52.4 pTM=0.418 ipTM=0.219 tol=5.11
2024-05-06 15:29:00,062 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=52.4 pTM=0.416 ipTM=0.219 tol=8.04
2024-05-06 15:29:25,878 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=52.5 pTM=0.417 ipTM=0.217 tol=7.32
2024-05-06 15:29:51,699 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=52.5 pTM=0.417 ipTM=0.229 tol=9.98
2024-05-06 15:30:17,521 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=52.3 pTM=0.419 ipTM=0.223 tol=6.33
2024-05-06 15:30:17,522 alphafold2_multimer_v3_model_5_seed_000 took 800.3s (30 recycles)
2024-05-06 15:30:18,290 reranking models by 'multimer' metric
2024-05-06 15:30:22,551 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-05-06 15:32:16,213 Relaxation took 117.9s
2024-05-06 15:32:16,213 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=53 pTM=0.408 ipTM=0.228
2024-05-06 15:34:36,834 Relaxation took 140.6s
2024-05-06 15:34:36,834 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=52.3 pTM=0.419 ipTM=0.223
2024-05-06 15:36:00,309 Relaxation took 83.5s
2024-05-06 15:36:00,309 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=53.2 pTM=0.412 ipTM=0.211
2024-05-06 15:37:50,328 Relaxation took 110.0s
2024-05-06 15:37:50,328 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=53.3 pTM=0.414 ipTM=0.206
2024-05-06 15:39:52,710 Relaxation took 122.4s
2024-05-06 15:39:52,710 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=49.7 pTM=0.401 ipTM=0.192
2024-05-06 15:39:54,841 Done