2024-05-06 14:21:27,106 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-05-06 14:21:27,553 Running on GPU
2024-05-06 14:21:31,333 Found 6 citations for tools or databases
2024-05-06 14:21:31,333 Query 1/1: CDK2AP1_FBXO7 (length 637)
2024-05-06 14:21:41,010 Setting max_seq=508, max_extra_seq=2048
2024-05-06 14:24:40,767 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=52.9 pTM=0.46 ipTM=0.382
2024-05-06 14:24:48,743 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=57 pTM=0.459 ipTM=0.301 tol=14.8
2024-05-06 14:24:56,707 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=56.8 pTM=0.45 ipTM=0.26 tol=6.44
2024-05-06 14:25:04,683 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=56.9 pTM=0.448 ipTM=0.255 tol=3.8
2024-05-06 14:25:12,686 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=57.2 pTM=0.449 ipTM=0.25 tol=3.23
2024-05-06 14:25:20,674 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=57.3 pTM=0.449 ipTM=0.249 tol=3.15
2024-05-06 14:25:28,674 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=58 pTM=0.453 ipTM=0.262 tol=2.69
2024-05-06 14:25:36,680 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=58.1 pTM=0.452 ipTM=0.257 tol=2.48
2024-05-06 14:25:44,699 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=58.5 pTM=0.456 ipTM=0.287 tol=2.48
2024-05-06 14:25:52,724 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=58.7 pTM=0.453 ipTM=0.267 tol=1.95
2024-05-06 14:26:00,740 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=58.6 pTM=0.453 ipTM=0.262 tol=3.2
2024-05-06 14:26:08,776 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=58.8 pTM=0.455 ipTM=0.285 tol=2.04
2024-05-06 14:26:16,815 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=58.5 pTM=0.452 ipTM=0.265 tol=2.66
2024-05-06 14:26:24,846 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=58.3 pTM=0.45 ipTM=0.251 tol=2.61
2024-05-06 14:26:32,891 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=58.3 pTM=0.452 ipTM=0.262 tol=2.16
2024-05-06 14:26:40,916 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=58.3 pTM=0.454 ipTM=0.276 tol=4.25
2024-05-06 14:26:48,954 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=58.6 pTM=0.456 ipTM=0.288 tol=3.04
2024-05-06 14:26:57,011 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=59 pTM=0.456 ipTM=0.287 tol=1.85
2024-05-06 14:27:05,065 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=58.8 pTM=0.457 ipTM=0.294 tol=3.1
2024-05-06 14:27:13,103 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=58.9 pTM=0.457 ipTM=0.292 tol=2.33
2024-05-06 14:27:21,147 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=58.5 pTM=0.453 ipTM=0.27 tol=1.85
2024-05-06 14:27:29,209 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=58.6 pTM=0.453 ipTM=0.268 tol=2.52
2024-05-06 14:27:37,257 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=58.8 pTM=0.458 ipTM=0.29 tol=2.68
2024-05-06 14:27:45,315 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=59 pTM=0.454 ipTM=0.273 tol=2.35
2024-05-06 14:27:53,363 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=58.9 pTM=0.455 ipTM=0.27 tol=2.48
2024-05-06 14:28:01,414 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=58.8 pTM=0.451 ipTM=0.258 tol=2.4
2024-05-06 14:28:09,470 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=58.4 pTM=0.452 ipTM=0.255 tol=2.4
2024-05-06 14:28:17,529 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=58.3 pTM=0.45 ipTM=0.25 tol=2
2024-05-06 14:28:25,596 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=58.2 pTM=0.452 ipTM=0.264 tol=1.43
2024-05-06 14:28:33,653 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=58.3 pTM=0.45 ipTM=0.263 tol=2.22
2024-05-06 14:28:41,724 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=58.4 pTM=0.453 ipTM=0.269 tol=2.33
2024-05-06 14:28:41,725 alphafold2_multimer_v3_model_1_seed_000 took 411.4s (30 recycles)
2024-05-06 14:28:50,048 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=54.4 pTM=0.47 ipTM=0.332
2024-05-06 14:28:58,146 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=57.2 pTM=0.457 ipTM=0.247 tol=12.5
2024-05-06 14:29:06,245 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=58.1 pTM=0.454 ipTM=0.237 tol=6.87
2024-05-06 14:29:14,337 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=58.2 pTM=0.453 ipTM=0.237 tol=4.95
2024-05-06 14:29:22,435 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=58.2 pTM=0.452 ipTM=0.231 tol=3.53
2024-05-06 14:29:30,536 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=58.2 pTM=0.452 ipTM=0.232 tol=2.11
2024-05-06 14:29:38,654 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=57.6 pTM=0.473 ipTM=0.334 tol=14.5
2024-05-06 14:29:46,775 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=58 pTM=0.448 ipTM=0.206 tol=12
2024-05-06 14:29:54,900 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=57.8 pTM=0.479 ipTM=0.372 tol=11.3
2024-05-06 14:30:03,009 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=58.5 pTM=0.45 ipTM=0.217 tol=7.35
2024-05-06 14:30:11,113 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=58.2 pTM=0.452 ipTM=0.228 tol=7.34
2024-05-06 14:30:19,217 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=58.1 pTM=0.455 ipTM=0.247 tol=10.4
2024-05-06 14:30:27,330 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=58.2 pTM=0.449 ipTM=0.218 tol=7.61
2024-05-06 14:30:35,434 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=58.2 pTM=0.451 ipTM=0.224 tol=9.16
2024-05-06 14:30:43,549 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=58.3 pTM=0.451 ipTM=0.226 tol=5.06
2024-05-06 14:30:51,659 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=58.3 pTM=0.451 ipTM=0.227 tol=3.67
2024-05-06 14:30:59,752 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=58 pTM=0.469 ipTM=0.326 tol=12.6
2024-05-06 14:31:07,879 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=58.3 pTM=0.45 ipTM=0.217 tol=10.3
2024-05-06 14:31:15,999 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=58 pTM=0.47 ipTM=0.321 tol=7.82
2024-05-06 14:31:24,110 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=58.5 pTM=0.45 ipTM=0.217 tol=8.73
2024-05-06 14:31:32,231 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=58.3 pTM=0.45 ipTM=0.217 tol=7.9
2024-05-06 14:31:40,353 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=57.9 pTM=0.467 ipTM=0.305 tol=11.5
2024-05-06 14:31:48,474 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=58.3 pTM=0.45 ipTM=0.211 tol=10.5
2024-05-06 14:31:56,574 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=58.4 pTM=0.47 ipTM=0.316 tol=9.05
2024-05-06 14:32:04,685 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=58.8 pTM=0.451 ipTM=0.22 tol=6.9
2024-05-06 14:32:12,790 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=58.5 pTM=0.451 ipTM=0.218 tol=8.23
2024-05-06 14:32:20,881 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=58.3 pTM=0.452 ipTM=0.22 tol=4.75
2024-05-06 14:32:29,004 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=58.3 pTM=0.45 ipTM=0.224 tol=4.33
2024-05-06 14:32:37,123 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=58.2 pTM=0.452 ipTM=0.229 tol=5.79
2024-05-06 14:32:45,240 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=58.1 pTM=0.449 ipTM=0.221 tol=4.12
2024-05-06 14:32:53,347 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=58.2 pTM=0.452 ipTM=0.229 tol=5.4
2024-05-06 14:32:53,348 alphafold2_multimer_v3_model_2_seed_000 took 251.4s (30 recycles)
2024-05-06 14:33:01,715 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=53.2 pTM=0.418 ipTM=0.27
2024-05-06 14:33:09,821 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=54 pTM=0.407 ipTM=0.237 tol=16.4
2024-05-06 14:33:17,912 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=54 pTM=0.401 ipTM=0.217 tol=9.96
2024-05-06 14:33:26,023 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=55.8 pTM=0.439 ipTM=0.225 tol=4.48
2024-05-06 14:33:34,130 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=55.7 pTM=0.446 ipTM=0.228 tol=5.83
2024-05-06 14:33:42,231 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=56.3 pTM=0.446 ipTM=0.223 tol=5.15
2024-05-06 14:33:50,333 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=56.6 pTM=0.449 ipTM=0.234 tol=3.22
2024-05-06 14:33:58,426 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=56.8 pTM=0.447 ipTM=0.224 tol=3.85
2024-05-06 14:34:06,532 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=56.9 pTM=0.453 ipTM=0.252 tol=3.22
2024-05-06 14:34:14,655 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=57.2 pTM=0.447 ipTM=0.221 tol=3.38
2024-05-06 14:34:22,762 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=57.2 pTM=0.448 ipTM=0.225 tol=2.59
2024-05-06 14:34:30,879 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=56.9 pTM=0.445 ipTM=0.219 tol=3.62
2024-05-06 14:34:39,003 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=57.1 pTM=0.45 ipTM=0.245 tol=4.95
2024-05-06 14:34:47,108 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=57 pTM=0.445 ipTM=0.217 tol=5.38
2024-05-06 14:34:55,215 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=57.3 pTM=0.449 ipTM=0.238 tol=3.22
2024-05-06 14:35:03,316 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=56.9 pTM=0.443 ipTM=0.211 tol=3.96
2024-05-06 14:35:11,424 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=57.1 pTM=0.448 ipTM=0.234 tol=3.12
2024-05-06 14:35:19,544 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=57.1 pTM=0.445 ipTM=0.217 tol=5.23
2024-05-06 14:35:27,664 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=57 pTM=0.451 ipTM=0.245 tol=5.59
2024-05-06 14:35:35,777 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=57.2 pTM=0.446 ipTM=0.218 tol=2.85
2024-05-06 14:35:43,884 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=57.2 pTM=0.448 ipTM=0.229 tol=4.12
2024-05-06 14:35:51,991 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=57.1 pTM=0.445 ipTM=0.211 tol=3.71
2024-05-06 14:36:00,100 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=57.1 pTM=0.45 ipTM=0.24 tol=4.98
2024-05-06 14:36:08,209 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=57.3 pTM=0.446 ipTM=0.217 tol=5.2
2024-05-06 14:36:16,324 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=57.1 pTM=0.448 ipTM=0.225 tol=4.01
2024-05-06 14:36:24,445 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=57.3 pTM=0.446 ipTM=0.212 tol=2.78
2024-05-06 14:36:32,562 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=57.1 pTM=0.448 ipTM=0.226 tol=4.36
2024-05-06 14:36:40,679 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=57.1 pTM=0.444 ipTM=0.206 tol=5.36
2024-05-06 14:36:48,785 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=56.8 pTM=0.447 ipTM=0.228 tol=2.48
2024-05-06 14:36:56,884 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=56.8 pTM=0.443 ipTM=0.209 tol=3.12
2024-05-06 14:37:05,006 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=56.9 pTM=0.449 ipTM=0.235 tol=4.01
2024-05-06 14:37:05,007 alphafold2_multimer_v3_model_3_seed_000 took 251.4s (30 recycles)
2024-05-06 14:37:13,331 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=52.1 pTM=0.415 ipTM=0.277
2024-05-06 14:37:21,401 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=53 pTM=0.42 ipTM=0.284 tol=13.3
2024-05-06 14:37:29,453 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=53.5 pTM=0.418 ipTM=0.265 tol=6.62
2024-05-06 14:37:37,530 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=55 pTM=0.442 ipTM=0.272 tol=7.43
2024-05-06 14:37:45,599 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=56 pTM=0.442 ipTM=0.239 tol=5.13
2024-05-06 14:37:53,678 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=56.2 pTM=0.442 ipTM=0.23 tol=4.71
2024-05-06 14:38:01,779 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=56.6 pTM=0.441 ipTM=0.226 tol=13.7
2024-05-06 14:38:09,867 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=56.4 pTM=0.439 ipTM=0.211 tol=5.82
2024-05-06 14:38:17,956 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=56.6 pTM=0.438 ipTM=0.205 tol=4.37
2024-05-06 14:38:26,050 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=56.7 pTM=0.441 ipTM=0.218 tol=4.97
2024-05-06 14:38:34,146 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=57.2 pTM=0.441 ipTM=0.209 tol=5.86
2024-05-06 14:38:42,231 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=57 pTM=0.438 ipTM=0.202 tol=3.4
2024-05-06 14:38:50,340 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=56.8 pTM=0.436 ipTM=0.201 tol=4.96
2024-05-06 14:38:58,446 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=56.4 pTM=0.438 ipTM=0.204 tol=2.93
2024-05-06 14:39:06,540 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=57 pTM=0.439 ipTM=0.202 tol=2.94
2024-05-06 14:39:14,647 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=56.8 pTM=0.438 ipTM=0.201 tol=5.89
2024-05-06 14:39:22,759 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=57 pTM=0.437 ipTM=0.198 tol=6.23
2024-05-06 14:39:30,874 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=56.9 pTM=0.439 ipTM=0.2 tol=4.62
2024-05-06 14:39:38,971 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=57.2 pTM=0.439 ipTM=0.203 tol=5.95
2024-05-06 14:39:47,070 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=56.9 pTM=0.439 ipTM=0.201 tol=4.46
2024-05-06 14:39:55,167 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=57 pTM=0.44 ipTM=0.208 tol=3.03
2024-05-06 14:40:03,248 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=56.9 pTM=0.441 ipTM=0.211 tol=5.35
2024-05-06 14:40:11,346 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=57.2 pTM=0.442 ipTM=0.211 tol=7.55
2024-05-06 14:40:19,447 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=57.5 pTM=0.44 ipTM=0.203 tol=6
2024-05-06 14:40:27,549 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=57.5 pTM=0.441 ipTM=0.202 tol=4.08
2024-05-06 14:40:35,650 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=57.5 pTM=0.44 ipTM=0.196 tol=3.83
2024-05-06 14:40:43,747 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=57.2 pTM=0.438 ipTM=0.193 tol=5.22
2024-05-06 14:40:51,841 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=56.6 pTM=0.44 ipTM=0.204 tol=5.45
2024-05-06 14:40:59,939 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=56.7 pTM=0.439 ipTM=0.202 tol=3.6
2024-05-06 14:41:08,037 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=56.5 pTM=0.438 ipTM=0.197 tol=5.03
2024-05-06 14:41:16,138 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=56.9 pTM=0.439 ipTM=0.196 tol=4.15
2024-05-06 14:41:16,138 alphafold2_multimer_v3_model_4_seed_000 took 250.9s (30 recycles)
2024-05-06 14:41:25,497 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=53.3 pTM=0.427 ipTM=0.248
2024-05-06 14:41:33,610 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=54.8 pTM=0.454 ipTM=0.256 tol=9.45
2024-05-06 14:41:41,702 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=56.3 pTM=0.455 ipTM=0.25 tol=6.26
2024-05-06 14:41:49,813 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=56.8 pTM=0.456 ipTM=0.246 tol=4.28
2024-05-06 14:41:57,923 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=57.5 pTM=0.451 ipTM=0.222 tol=3.87
2024-05-06 14:42:06,016 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=56.7 pTM=0.463 ipTM=0.292 tol=8.25
2024-05-06 14:42:14,135 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=57.8 pTM=0.447 ipTM=0.196 tol=6.75
2024-05-06 14:42:22,251 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=57.1 pTM=0.448 ipTM=0.209 tol=2.62
2024-05-06 14:42:30,363 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=57 pTM=0.45 ipTM=0.209 tol=5.14
2024-05-06 14:42:38,469 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=57.4 pTM=0.448 ipTM=0.201 tol=5.57
2024-05-06 14:42:46,568 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=56.9 pTM=0.452 ipTM=0.221 tol=2.31
2024-05-06 14:42:54,664 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=57 pTM=0.449 ipTM=0.21 tol=5.35
2024-05-06 14:43:02,774 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=57 pTM=0.448 ipTM=0.208 tol=6.76
2024-05-06 14:43:10,871 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=56.4 pTM=0.449 ipTM=0.214 tol=6.91
2024-05-06 14:43:18,974 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=57 pTM=0.449 ipTM=0.207 tol=6.86
2024-05-06 14:43:27,069 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=56.3 pTM=0.453 ipTM=0.231 tol=4.35
2024-05-06 14:43:35,178 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=57.4 pTM=0.448 ipTM=0.21 tol=5.52
2024-05-06 14:43:43,295 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=56.8 pTM=0.446 ipTM=0.197 tol=6.56
2024-05-06 14:43:51,410 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=56.8 pTM=0.447 ipTM=0.201 tol=4.78
2024-05-06 14:43:59,508 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=56.9 pTM=0.447 ipTM=0.2 tol=3.09
2024-05-06 14:44:07,621 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=57.1 pTM=0.449 ipTM=0.211 tol=2.88
2024-05-06 14:44:15,715 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=57.3 pTM=0.449 ipTM=0.211 tol=2.99
2024-05-06 14:44:23,814 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=57.1 pTM=0.449 ipTM=0.213 tol=2.09
2024-05-06 14:44:31,915 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=57.3 pTM=0.45 ipTM=0.22 tol=2.28
2024-05-06 14:44:40,010 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=57.7 pTM=0.452 ipTM=0.229 tol=2.63
2024-05-06 14:44:48,107 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=57.4 pTM=0.449 ipTM=0.213 tol=3.37
2024-05-06 14:44:56,208 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=57.4 pTM=0.448 ipTM=0.207 tol=4.84
2024-05-06 14:45:04,307 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=57.2 pTM=0.448 ipTM=0.211 tol=5.43
2024-05-06 14:45:12,410 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=56.8 pTM=0.448 ipTM=0.209 tol=5.62
2024-05-06 14:45:20,506 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=57.1 pTM=0.448 ipTM=0.21 tol=4.01
2024-05-06 14:45:28,613 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=57 pTM=0.447 ipTM=0.207 tol=2.67
2024-05-06 14:45:28,614 alphafold2_multimer_v3_model_5_seed_000 took 251.2s (30 recycles)
2024-05-06 14:45:28,878 reranking models by 'multimer' metric
2024-05-06 14:45:32,135 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-05-06 14:46:19,324 Relaxation took 50.4s
2024-05-06 14:46:19,324 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=58.4 pTM=0.453 ipTM=0.269
2024-05-06 14:46:53,263 Relaxation took 33.9s
2024-05-06 14:46:53,263 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=56.9 pTM=0.449 ipTM=0.235
2024-05-06 14:47:24,363 Relaxation took 31.1s
2024-05-06 14:47:24,363 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=58.2 pTM=0.452 ipTM=0.229
2024-05-06 14:47:58,722 Relaxation took 34.4s
2024-05-06 14:47:58,722 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=57 pTM=0.447 ipTM=0.207
2024-05-06 14:48:31,824 Relaxation took 33.1s
2024-05-06 14:48:31,824 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=56.9 pTM=0.439 ipTM=0.196
2024-05-06 14:48:33,020 Done