2024-05-06 15:33:54,527 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-05-06 15:33:54,995 Running on GPU 2024-05-06 15:33:58,909 Found 6 citations for tools or databases 2024-05-06 15:33:58,910 Query 1/1: CDKN1A_FBXL6 (length 703) 2024-05-06 15:34:02,771 Setting max_seq=508, max_extra_seq=2048 2024-05-06 15:36:51,650 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=64.1 pTM=0.625 ipTM=0.233 2024-05-06 15:37:01,287 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=64.6 pTM=0.632 ipTM=0.268 tol=7.46 2024-05-06 15:37:10,956 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=65.1 pTM=0.621 ipTM=0.203 tol=6.18 2024-05-06 15:37:20,613 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=65.2 pTM=0.624 ipTM=0.219 tol=2.84 2024-05-06 15:37:30,288 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=65.5 pTM=0.621 ipTM=0.213 tol=2.69 2024-05-06 15:37:39,984 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=65.8 pTM=0.623 ipTM=0.206 tol=2.7 2024-05-06 15:37:49,661 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=65.7 pTM=0.623 ipTM=0.217 tol=1.86 2024-05-06 15:37:59,350 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=65.5 pTM=0.621 ipTM=0.212 tol=2.28 2024-05-06 15:38:09,044 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=66.1 pTM=0.625 ipTM=0.229 tol=3.35 2024-05-06 15:38:18,739 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=65.4 pTM=0.626 ipTM=0.229 tol=3.53 2024-05-06 15:38:28,416 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=66.1 pTM=0.626 ipTM=0.235 tol=3.72 2024-05-06 15:38:38,103 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=65.9 pTM=0.625 ipTM=0.226 tol=2.12 2024-05-06 15:38:47,830 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=65.8 pTM=0.644 ipTM=0.319 tol=6.43 2024-05-06 15:38:57,552 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=65.6 pTM=0.628 ipTM=0.228 tol=5.02 2024-05-06 15:39:07,277 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=65.2 pTM=0.629 ipTM=0.228 tol=3.58 2024-05-06 15:39:17,017 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=65.4 pTM=0.629 ipTM=0.226 tol=2.93 2024-05-06 15:39:26,752 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=65.5 pTM=0.628 ipTM=0.223 tol=2.23 2024-05-06 15:39:36,466 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=65.4 pTM=0.627 ipTM=0.229 tol=1.77 2024-05-06 15:39:46,208 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=65.7 pTM=0.626 ipTM=0.22 tol=1.21 2024-05-06 15:39:55,965 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=65.6 pTM=0.627 ipTM=0.225 tol=1.18 2024-05-06 15:40:05,715 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=65.6 pTM=0.628 ipTM=0.222 tol=1.39 2024-05-06 15:40:15,488 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=66.4 pTM=0.648 ipTM=0.338 tol=6.39 2024-05-06 15:40:25,224 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=66.3 pTM=0.626 ipTM=0.225 tol=5.54 2024-05-06 15:40:34,986 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=66.1 pTM=0.629 ipTM=0.233 tol=1.47 2024-05-06 15:40:44,740 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=66.1 pTM=0.629 ipTM=0.229 tol=0.912 2024-05-06 15:40:54,495 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=65.9 pTM=0.628 ipTM=0.23 tol=1.04 2024-05-06 15:41:04,239 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=65.6 pTM=0.626 ipTM=0.223 tol=0.823 2024-05-06 15:41:13,979 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=65.7 pTM=0.627 ipTM=0.227 tol=1.41 2024-05-06 15:41:23,747 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=65.6 pTM=0.626 ipTM=0.22 tol=1.34 2024-05-06 15:41:33,501 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=65.6 pTM=0.626 ipTM=0.219 tol=1.23 2024-05-06 15:41:43,258 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=65.8 pTM=0.627 ipTM=0.218 tol=1.01 2024-05-06 15:41:43,259 alphafold2_multimer_v3_model_1_seed_000 took 455.1s (30 recycles) 2024-05-06 15:41:53,391 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=64.7 pTM=0.649 ipTM=0.451 2024-05-06 15:42:03,196 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=65 pTM=0.621 ipTM=0.186 tol=9.55 2024-05-06 15:42:12,972 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=64.6 pTM=0.621 ipTM=0.188 tol=2.5 2024-05-06 15:42:22,782 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=64.6 pTM=0.622 ipTM=0.189 tol=3.04 2024-05-06 15:42:32,578 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=65.4 pTM=0.624 ipTM=0.208 tol=2.49 2024-05-06 15:42:42,383 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=65.6 pTM=0.626 ipTM=0.209 tol=1.78 2024-05-06 15:42:52,162 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=65.4 pTM=0.625 ipTM=0.217 tol=1.33 2024-05-06 15:43:01,956 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=65.6 pTM=0.625 ipTM=0.208 tol=1.23 2024-05-06 15:43:11,751 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=65.8 pTM=0.623 ipTM=0.21 tol=1.76 2024-05-06 15:43:21,569 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=66 pTM=0.626 ipTM=0.202 tol=2.4 2024-05-06 15:43:31,370 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=65.4 pTM=0.641 ipTM=0.38 tol=6.12 2024-05-06 15:43:41,178 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=66.1 pTM=0.625 ipTM=0.201 tol=6.68 2024-05-06 15:43:50,995 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=66.3 pTM=0.625 ipTM=0.212 tol=6.49 2024-05-06 15:44:00,810 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=65.8 pTM=0.643 ipTM=0.386 tol=7.33 2024-05-06 15:44:10,629 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=66.1 pTM=0.62 ipTM=0.239 tol=8.68 2024-05-06 15:44:20,438 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=66.6 pTM=0.621 ipTM=0.295 tol=3.13 2024-05-06 15:44:30,236 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=66.8 pTM=0.622 ipTM=0.273 tol=1.96 2024-05-06 15:44:40,043 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=65.6 pTM=0.631 ipTM=0.347 tol=7.78 2024-05-06 15:44:49,877 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=66.3 pTM=0.622 ipTM=0.22 tol=7.04 2024-05-06 15:44:59,696 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=67.8 pTM=0.628 ipTM=0.303 tol=2.96 2024-05-06 15:45:09,518 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=67.9 pTM=0.635 ipTM=0.331 tol=1.78 2024-05-06 15:45:19,355 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=68.4 pTM=0.638 ipTM=0.338 tol=2.59 2024-05-06 15:45:29,168 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=68.2 pTM=0.639 ipTM=0.363 tol=1.33 2024-05-06 15:45:38,987 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=68.9 pTM=0.645 ipTM=0.384 tol=0.865 2024-05-06 15:45:48,808 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=69.1 pTM=0.65 ipTM=0.411 tol=1.09 2024-05-06 15:45:58,642 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=69.6 pTM=0.656 ipTM=0.429 tol=0.937 2024-05-06 15:46:08,445 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=69.1 pTM=0.652 ipTM=0.42 tol=1.24 2024-05-06 15:46:18,262 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=69.9 pTM=0.659 ipTM=0.437 tol=0.986 2024-05-06 15:46:28,082 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=69.4 pTM=0.657 ipTM=0.432 tol=1.36 2024-05-06 15:46:37,890 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=69.7 pTM=0.654 ipTM=0.424 tol=0.902 2024-05-06 15:46:47,723 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=69.6 pTM=0.658 ipTM=0.429 tol=0.884 2024-05-06 15:46:47,724 alphafold2_multimer_v3_model_2_seed_000 took 304.1s (30 recycles) 2024-05-06 15:46:57,853 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=64.4 pTM=0.633 ipTM=0.246 2024-05-06 15:47:07,669 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=65 pTM=0.621 ipTM=0.18 tol=9.29 2024-05-06 15:47:17,520 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=65.9 pTM=0.641 ipTM=0.267 tol=8.02 2024-05-06 15:47:27,367 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=66.2 pTM=0.623 ipTM=0.203 tol=9.98 2024-05-06 15:47:37,207 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=68.2 pTM=0.643 ipTM=0.368 tol=6.27 2024-05-06 15:47:47,056 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=68.9 pTM=0.649 ipTM=0.454 tol=2.98 2024-05-06 15:47:56,899 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=69.4 pTM=0.658 ipTM=0.484 tol=1.8 2024-05-06 15:48:06,756 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=69.3 pTM=0.657 ipTM=0.49 tol=2.32 2024-05-06 15:48:16,599 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=69.4 pTM=0.659 ipTM=0.496 tol=5.29 2024-05-06 15:48:26,446 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=69.4 pTM=0.66 ipTM=0.496 tol=2.24 2024-05-06 15:48:36,292 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=69.4 pTM=0.659 ipTM=0.496 tol=1.66 2024-05-06 15:48:46,149 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=69.5 pTM=0.662 ipTM=0.5 tol=1.83 2024-05-06 15:48:56,017 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=69.4 pTM=0.661 ipTM=0.503 tol=2.16 2024-05-06 15:49:05,867 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=69.5 pTM=0.661 ipTM=0.501 tol=1.77 2024-05-06 15:49:15,726 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=69.5 pTM=0.662 ipTM=0.502 tol=1.45 2024-05-06 15:49:25,586 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=69.4 pTM=0.66 ipTM=0.495 tol=1.05 2024-05-06 15:49:35,425 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=69.4 pTM=0.662 ipTM=0.496 tol=1.06 2024-05-06 15:49:45,267 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=69.4 pTM=0.66 ipTM=0.501 tol=1.06 2024-05-06 15:49:55,127 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=69.6 pTM=0.664 ipTM=0.501 tol=1.14 2024-05-06 15:50:04,961 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=69.3 pTM=0.66 ipTM=0.488 tol=3.98 2024-05-06 15:50:14,812 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=69.6 pTM=0.663 ipTM=0.5 tol=1.23 2024-05-06 15:50:24,677 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=69.7 pTM=0.665 ipTM=0.502 tol=1.31 2024-05-06 15:50:34,526 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=69.6 pTM=0.663 ipTM=0.501 tol=1.15 2024-05-06 15:50:44,390 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=69.6 pTM=0.662 ipTM=0.496 tol=1.05 2024-05-06 15:50:54,236 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=69.4 pTM=0.661 ipTM=0.494 tol=0.815 2024-05-06 15:51:04,066 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=69.5 pTM=0.662 ipTM=0.495 tol=0.697 2024-05-06 15:51:13,909 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=69.3 pTM=0.661 ipTM=0.487 tol=0.796 2024-05-06 15:51:23,754 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=69.5 pTM=0.662 ipTM=0.496 tol=1.19 2024-05-06 15:51:33,610 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=69.5 pTM=0.664 ipTM=0.498 tol=1.93 2024-05-06 15:51:43,448 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=69.6 pTM=0.663 ipTM=0.495 tol=1.35 2024-05-06 15:51:53,284 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=69.5 pTM=0.665 ipTM=0.496 tol=1.23 2024-05-06 15:51:53,285 alphafold2_multimer_v3_model_3_seed_000 took 305.2s (30 recycles) 2024-05-06 15:52:03,428 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=63.8 pTM=0.629 ipTM=0.225 2024-05-06 15:52:13,256 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=64.3 pTM=0.628 ipTM=0.192 tol=6.84 2024-05-06 15:52:23,085 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=64.4 pTM=0.624 ipTM=0.183 tol=7.89 2024-05-06 15:52:32,904 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=64.6 pTM=0.622 ipTM=0.179 tol=5.37 2024-05-06 15:52:42,721 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=64.7 pTM=0.621 ipTM=0.182 tol=4.38 2024-05-06 15:52:52,519 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=64.8 pTM=0.62 ipTM=0.176 tol=1.59 2024-05-06 15:53:02,345 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=64.6 pTM=0.622 ipTM=0.182 tol=3.08 2024-05-06 15:53:12,130 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=64.6 pTM=0.62 ipTM=0.184 tol=1.85 2024-05-06 15:53:21,929 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=64.8 pTM=0.619 ipTM=0.178 tol=2.28 2024-05-06 15:53:31,726 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=65.2 pTM=0.625 ipTM=0.212 tol=3.75 2024-05-06 15:53:41,527 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=65.1 pTM=0.62 ipTM=0.186 tol=4.73 2024-05-06 15:53:51,316 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=65.2 pTM=0.63 ipTM=0.251 tol=4.62 2024-05-06 15:54:01,132 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=64.9 pTM=0.62 ipTM=0.178 tol=7.84 2024-05-06 15:54:10,935 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=64.7 pTM=0.624 ipTM=0.2 tol=5.59 2024-05-06 15:54:20,759 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=64.9 pTM=0.621 ipTM=0.174 tol=6.66 2024-05-06 15:54:30,589 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=64.8 pTM=0.625 ipTM=0.201 tol=5.22 2024-05-06 15:54:40,400 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=64.8 pTM=0.618 ipTM=0.17 tol=4.78 2024-05-06 15:54:50,208 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=64.8 pTM=0.624 ipTM=0.216 tol=6.04 2024-05-06 15:55:00,031 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=64.9 pTM=0.618 ipTM=0.166 tol=5.14 2024-05-06 15:55:09,825 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=64.6 pTM=0.62 ipTM=0.19 tol=4.4 2024-05-06 15:55:19,650 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=64.8 pTM=0.616 ipTM=0.167 tol=3.05 2024-05-06 15:55:29,465 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=65.7 pTM=0.632 ipTM=0.311 tol=5.01 2024-05-06 15:55:39,280 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=65.1 pTM=0.619 ipTM=0.172 tol=5.21 2024-05-06 15:55:49,081 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=64.9 pTM=0.62 ipTM=0.186 tol=2.96 2024-05-06 15:55:58,904 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=64.8 pTM=0.617 ipTM=0.17 tol=2.17 2024-05-06 15:56:08,712 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=64.9 pTM=0.62 ipTM=0.176 tol=2.68 2024-05-06 15:56:18,526 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=64.6 pTM=0.617 ipTM=0.169 tol=3.04 2024-05-06 15:56:28,346 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=64.8 pTM=0.618 ipTM=0.173 tol=2.62 2024-05-06 15:56:38,156 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=64.9 pTM=0.618 ipTM=0.173 tol=2.45 2024-05-06 15:56:47,979 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=64.9 pTM=0.62 ipTM=0.176 tol=2.43 2024-05-06 15:56:57,804 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=64.9 pTM=0.618 ipTM=0.17 tol=2.65 2024-05-06 15:56:57,804 alphafold2_multimer_v3_model_4_seed_000 took 304.2s (30 recycles) 2024-05-06 15:57:07,957 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=63.7 pTM=0.655 ipTM=0.356 2024-05-06 15:57:17,789 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=64.7 pTM=0.629 ipTM=0.226 tol=10.8 2024-05-06 15:57:27,620 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=64.8 pTM=0.628 ipTM=0.202 tol=8.05 2024-05-06 15:57:37,444 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=65.6 pTM=0.628 ipTM=0.209 tol=3.96 2024-05-06 15:57:47,259 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=65.2 pTM=0.622 ipTM=0.177 tol=2.29 2024-05-06 15:57:57,057 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=65.1 pTM=0.623 ipTM=0.179 tol=1.62 2024-05-06 15:58:06,872 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=64.6 pTM=0.624 ipTM=0.187 tol=3.42 2024-05-06 15:58:16,703 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=64.8 pTM=0.619 ipTM=0.169 tol=2.45 2024-05-06 15:58:26,527 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=64.4 pTM=0.621 ipTM=0.179 tol=4.06 2024-05-06 15:58:36,356 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=64.9 pTM=0.62 ipTM=0.194 tol=3.29 2024-05-06 15:58:46,190 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=65.1 pTM=0.617 ipTM=0.152 tol=2.32 2024-05-06 15:58:56,017 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=65.4 pTM=0.617 ipTM=0.146 tol=2.75 2024-05-06 15:59:05,841 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=65.5 pTM=0.63 ipTM=0.321 tol=9.64 2024-05-06 15:59:15,681 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=65 pTM=0.614 ipTM=0.159 tol=6.33 2024-05-06 15:59:25,533 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=64.8 pTM=0.618 ipTM=0.165 tol=5.26 2024-05-06 15:59:35,375 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=64.6 pTM=0.625 ipTM=0.206 tol=3.64 2024-05-06 15:59:45,208 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=65.1 pTM=0.62 ipTM=0.187 tol=4.04 2024-05-06 15:59:55,031 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=64.6 pTM=0.62 ipTM=0.181 tol=3.13 2024-05-06 16:00:04,856 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=65.2 pTM=0.625 ipTM=0.265 tol=6.37 2024-05-06 16:00:14,704 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=65.4 pTM=0.615 ipTM=0.157 tol=4.14 2024-05-06 16:00:24,532 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=65 pTM=0.622 ipTM=0.225 tol=5.94 2024-05-06 16:00:34,354 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=64.8 pTM=0.621 ipTM=0.217 tol=4.83 2024-05-06 16:00:44,185 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=65.2 pTM=0.622 ipTM=0.202 tol=3.62 2024-05-06 16:00:54,017 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=64.9 pTM=0.628 ipTM=0.28 tol=4.52 2024-05-06 16:01:03,854 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=64.9 pTM=0.618 ipTM=0.175 tol=4.43 2024-05-06 16:01:13,685 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=65 pTM=0.62 ipTM=0.196 tol=6.22 2024-05-06 16:01:23,503 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=64.5 pTM=0.62 ipTM=0.209 tol=5.57 2024-05-06 16:01:33,299 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=64.9 pTM=0.617 ipTM=0.171 tol=3.74 2024-05-06 16:01:43,090 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=65.1 pTM=0.617 ipTM=0.159 tol=2.57 2024-05-06 16:01:52,877 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=64.8 pTM=0.619 ipTM=0.173 tol=2.82 2024-05-06 16:02:02,663 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=65 pTM=0.625 ipTM=0.23 tol=2.79 2024-05-06 16:02:02,663 alphafold2_multimer_v3_model_5_seed_000 took 304.5s (30 recycles) 2024-05-06 16:02:02,979 reranking models by 'multimer' metric 2024-05-06 16:02:05,896 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-05-06 16:03:13,535 Relaxation took 70.6s 2024-05-06 16:03:13,535 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=69.5 pTM=0.665 ipTM=0.496 2024-05-06 16:03:40,159 Relaxation took 26.6s 2024-05-06 16:03:40,159 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=69.6 pTM=0.658 ipTM=0.429 2024-05-06 16:04:23,653 Relaxation took 43.5s 2024-05-06 16:04:23,653 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=65 pTM=0.625 ipTM=0.23 2024-05-06 16:05:21,519 Relaxation took 57.9s 2024-05-06 16:05:21,519 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=65.8 pTM=0.627 ipTM=0.218 2024-05-06 16:06:00,575 Relaxation took 39.1s 2024-05-06 16:06:00,575 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=64.9 pTM=0.618 ipTM=0.17 2024-05-06 16:06:01,990 Done