2024-05-06 16:17:32,690 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-05-06 16:17:33,204 Running on GPU
2024-05-06 16:17:36,443 Found 6 citations for tools or databases
2024-05-06 16:17:36,443 Query 1/1: CDKN1A_SKP2 (length 588)
2024-05-06 16:17:37,833 Sleeping for 10s. Reason: PENDING
2024-05-06 16:17:48,257 Sleeping for 6s. Reason: RUNNING
2024-05-06 16:17:54,681 Sleeping for 5s. Reason: RUNNING
2024-05-06 16:18:00,098 Sleeping for 9s. Reason: RUNNING
2024-05-06 16:18:09,522 Sleeping for 10s. Reason: RUNNING
2024-05-06 16:18:19,958 Sleeping for 10s. Reason: RUNNING
2024-05-06 16:18:32,827 Sleeping for 5s. Reason: PENDING
2024-05-06 16:18:38,228 Sleeping for 10s. Reason: RUNNING
2024-05-06 16:18:49,169 Sleeping for 5s. Reason: RUNNING
2024-05-06 16:18:54,747 Sleeping for 9s. Reason: RUNNING
2024-05-06 16:19:04,183 Sleeping for 8s. Reason: RUNNING
2024-05-06 16:19:14,833 Setting max_seq=508, max_extra_seq=2048
2024-05-06 16:22:08,012 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=63.3 pTM=0.617 ipTM=0.286
2024-05-06 16:22:18,079 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=64.6 pTM=0.602 ipTM=0.221 tol=6.22
2024-05-06 16:22:28,127 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=64.1 pTM=0.602 ipTM=0.211 tol=4.98
2024-05-06 16:22:38,146 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=64.1 pTM=0.588 ipTM=0.174 tol=3.43
2024-05-06 16:22:48,177 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=64.2 pTM=0.595 ipTM=0.233 tol=1.88
2024-05-06 16:22:58,226 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=64.4 pTM=0.597 ipTM=0.25 tol=3.57
2024-05-06 16:23:08,261 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=64.4 pTM=0.592 ipTM=0.202 tol=1.66
2024-05-06 16:23:18,306 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=64.4 pTM=0.594 ipTM=0.178 tol=3.11
2024-05-06 16:23:28,348 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=64.6 pTM=0.591 ipTM=0.172 tol=3.51
2024-05-06 16:23:38,418 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=64.6 pTM=0.592 ipTM=0.185 tol=2.88
2024-05-06 16:23:48,457 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=64.5 pTM=0.591 ipTM=0.181 tol=1.2
2024-05-06 16:23:58,510 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=64.6 pTM=0.595 ipTM=0.193 tol=1.18
2024-05-06 16:24:08,551 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=64.8 pTM=0.596 ipTM=0.197 tol=1.7
2024-05-06 16:24:18,591 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=64.7 pTM=0.597 ipTM=0.208 tol=1.2
2024-05-06 16:24:28,631 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=64.8 pTM=0.594 ipTM=0.192 tol=2.25
2024-05-06 16:24:38,669 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=64.7 pTM=0.597 ipTM=0.202 tol=1.11
2024-05-06 16:24:48,695 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=64.4 pTM=0.593 ipTM=0.19 tol=1.54
2024-05-06 16:24:58,722 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=64.8 pTM=0.599 ipTM=0.213 tol=2.76
2024-05-06 16:25:08,759 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=64.9 pTM=0.597 ipTM=0.2 tol=1.18
2024-05-06 16:25:18,799 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=64.5 pTM=0.597 ipTM=0.203 tol=1.51
2024-05-06 16:25:28,831 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=64.6 pTM=0.593 ipTM=0.186 tol=1.16
2024-05-06 16:25:38,870 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=64.4 pTM=0.598 ipTM=0.202 tol=2.29
2024-05-06 16:25:48,914 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=64.8 pTM=0.592 ipTM=0.182 tol=1.16
2024-05-06 16:25:58,960 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=64.9 pTM=0.596 ipTM=0.197 tol=2.3
2024-05-06 16:26:09,022 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=65 pTM=0.593 ipTM=0.181 tol=3.14
2024-05-06 16:26:19,057 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=64.8 pTM=0.599 ipTM=0.208 tol=1.4
2024-05-06 16:26:29,099 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=64.8 pTM=0.594 ipTM=0.191 tol=1.01
2024-05-06 16:26:39,141 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=64.5 pTM=0.595 ipTM=0.193 tol=1.6
2024-05-06 16:26:49,190 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=64.8 pTM=0.596 ipTM=0.196 tol=1.3
2024-05-06 16:26:59,244 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=64.6 pTM=0.597 ipTM=0.198 tol=1.23
2024-05-06 16:27:09,284 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=64.9 pTM=0.595 ipTM=0.194 tol=1.04
2024-05-06 16:27:09,285 alphafold2_multimer_v3_model_1_seed_000 took 465.6s (30 recycles)
2024-05-06 16:27:19,652 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=63 pTM=0.589 ipTM=0.15
2024-05-06 16:27:29,741 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=63.4 pTM=0.588 ipTM=0.144 tol=6.9
2024-05-06 16:27:39,822 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=63.5 pTM=0.591 ipTM=0.154 tol=3.65
2024-05-06 16:27:49,901 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=63.6 pTM=0.586 ipTM=0.14 tol=2.53
2024-05-06 16:27:59,986 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=63.2 pTM=0.587 ipTM=0.138 tol=3
2024-05-06 16:28:10,086 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=63.4 pTM=0.587 ipTM=0.142 tol=3.59
2024-05-06 16:28:20,169 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=63.6 pTM=0.583 ipTM=0.135 tol=5.28
2024-05-06 16:28:30,258 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=63.6 pTM=0.586 ipTM=0.136 tol=3.16
2024-05-06 16:28:40,347 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=64.3 pTM=0.587 ipTM=0.143 tol=7.11
2024-05-06 16:28:50,432 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=64.1 pTM=0.586 ipTM=0.139 tol=2.07
2024-05-06 16:29:00,518 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=63.8 pTM=0.585 ipTM=0.139 tol=1.67
2024-05-06 16:29:10,600 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=63.7 pTM=0.586 ipTM=0.139 tol=3.13
2024-05-06 16:29:20,684 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=64.1 pTM=0.587 ipTM=0.143 tol=2.13
2024-05-06 16:29:30,775 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=64.1 pTM=0.588 ipTM=0.146 tol=1.65
2024-05-06 16:29:40,858 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=64.2 pTM=0.589 ipTM=0.15 tol=2.76
2024-05-06 16:29:50,945 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=64.3 pTM=0.589 ipTM=0.151 tol=1.9
2024-05-06 16:30:01,015 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=64.4 pTM=0.587 ipTM=0.152 tol=1.15
2024-05-06 16:30:11,092 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=64.5 pTM=0.589 ipTM=0.159 tol=1.81
2024-05-06 16:30:21,187 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=64.9 pTM=0.591 ipTM=0.173 tol=1.26
2024-05-06 16:30:31,258 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=64.6 pTM=0.591 ipTM=0.166 tol=1.79
2024-05-06 16:30:41,345 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=64.9 pTM=0.59 ipTM=0.158 tol=0.812
2024-05-06 16:30:51,431 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=64.6 pTM=0.59 ipTM=0.155 tol=0.821
2024-05-06 16:31:01,506 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=64.8 pTM=0.589 ipTM=0.152 tol=1.13
2024-05-06 16:31:11,596 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=64.8 pTM=0.588 ipTM=0.149 tol=1.2
2024-05-06 16:31:21,667 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=64.9 pTM=0.589 ipTM=0.16 tol=1.28
2024-05-06 16:31:31,752 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=64.8 pTM=0.591 ipTM=0.18 tol=1.28
2024-05-06 16:31:41,836 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=64.9 pTM=0.59 ipTM=0.171 tol=0.865
2024-05-06 16:31:51,915 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=64.8 pTM=0.589 ipTM=0.16 tol=1.55
2024-05-06 16:32:02,016 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=64.9 pTM=0.593 ipTM=0.177 tol=1.21
2024-05-06 16:32:12,095 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=65.1 pTM=0.593 ipTM=0.173 tol=1.17
2024-05-06 16:32:22,187 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=65.3 pTM=0.596 ipTM=0.189 tol=1.15
2024-05-06 16:32:22,188 alphafold2_multimer_v3_model_2_seed_000 took 312.6s (30 recycles)
2024-05-06 16:32:32,574 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=62 pTM=0.592 ipTM=0.224
2024-05-06 16:32:42,688 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=63.2 pTM=0.593 ipTM=0.193 tol=12.9
2024-05-06 16:32:52,784 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=62.9 pTM=0.585 ipTM=0.153 tol=9.58
2024-05-06 16:33:02,874 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=63 pTM=0.59 ipTM=0.178 tol=5.93
2024-05-06 16:33:12,982 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=63.5 pTM=0.588 ipTM=0.163 tol=4.83
2024-05-06 16:33:23,084 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=63.7 pTM=0.594 ipTM=0.182 tol=1.98
2024-05-06 16:33:33,195 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=63.9 pTM=0.592 ipTM=0.176 tol=6.91
2024-05-06 16:33:43,291 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=63.9 pTM=0.593 ipTM=0.18 tol=5.84
2024-05-06 16:33:53,375 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=63.8 pTM=0.591 ipTM=0.171 tol=2.89
2024-05-06 16:34:03,484 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=63.8 pTM=0.591 ipTM=0.177 tol=1.78
2024-05-06 16:34:13,591 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=63.7 pTM=0.589 ipTM=0.167 tol=1.53
2024-05-06 16:34:23,710 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=63.3 pTM=0.588 ipTM=0.16 tol=1.51
2024-05-06 16:34:33,804 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=63 pTM=0.587 ipTM=0.157 tol=2.24
2024-05-06 16:34:43,891 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=62.9 pTM=0.585 ipTM=0.153 tol=2.3
2024-05-06 16:34:54,001 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=62.8 pTM=0.584 ipTM=0.146 tol=2.37
2024-05-06 16:35:04,110 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=62.6 pTM=0.582 ipTM=0.135 tol=5.18
2024-05-06 16:35:14,209 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=62.2 pTM=0.582 ipTM=0.134 tol=6.79
2024-05-06 16:35:24,326 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=62.7 pTM=0.583 ipTM=0.135 tol=4.6
2024-05-06 16:35:34,431 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=62.6 pTM=0.582 ipTM=0.134 tol=2.33
2024-05-06 16:35:44,551 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=61.9 pTM=0.579 ipTM=0.125 tol=5.85
2024-05-06 16:35:54,660 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=62 pTM=0.58 ipTM=0.13 tol=3.09
2024-05-06 16:36:04,768 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=62.1 pTM=0.58 ipTM=0.13 tol=3.34
2024-05-06 16:36:14,871 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=62.1 pTM=0.583 ipTM=0.142 tol=8.49
2024-05-06 16:36:24,982 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=62.5 pTM=0.583 ipTM=0.136 tol=4.7
2024-05-06 16:36:35,099 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=62.4 pTM=0.584 ipTM=0.139 tol=2.43
2024-05-06 16:36:45,198 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=62.6 pTM=0.582 ipTM=0.136 tol=4.47
2024-05-06 16:36:55,352 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=62.2 pTM=0.582 ipTM=0.134 tol=6.23
2024-05-06 16:37:05,471 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=62.3 pTM=0.583 ipTM=0.135 tol=5
2024-05-06 16:37:15,573 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=62.2 pTM=0.584 ipTM=0.141 tol=2.76
2024-05-06 16:37:25,684 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=62.3 pTM=0.584 ipTM=0.142 tol=2.2
2024-05-06 16:37:35,791 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=62.1 pTM=0.584 ipTM=0.139 tol=3.82
2024-05-06 16:37:35,791 alphafold2_multimer_v3_model_3_seed_000 took 313.3s (30 recycles)
2024-05-06 16:37:46,166 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=61.6 pTM=0.58 ipTM=0.145
2024-05-06 16:37:56,251 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=62.1 pTM=0.593 ipTM=0.177 tol=8.82
2024-05-06 16:38:06,339 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=61.9 pTM=0.589 ipTM=0.152 tol=4.85
2024-05-06 16:38:16,432 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=61.7 pTM=0.585 ipTM=0.142 tol=11.6
2024-05-06 16:38:26,529 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=61.6 pTM=0.588 ipTM=0.146 tol=5.07
2024-05-06 16:38:36,626 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=62 pTM=0.588 ipTM=0.147 tol=3.44
2024-05-06 16:38:46,715 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=61.9 pTM=0.587 ipTM=0.143 tol=2.54
2024-05-06 16:38:56,805 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=62.2 pTM=0.587 ipTM=0.144 tol=3.01
2024-05-06 16:39:06,900 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=62 pTM=0.587 ipTM=0.143 tol=1.66
2024-05-06 16:39:16,987 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=62.4 pTM=0.587 ipTM=0.146 tol=1.98
2024-05-06 16:39:27,087 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=61.9 pTM=0.588 ipTM=0.145 tol=3.36
2024-05-06 16:39:37,179 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=62.1 pTM=0.589 ipTM=0.151 tol=4.31
2024-05-06 16:39:47,271 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=61.8 pTM=0.586 ipTM=0.142 tol=2.5
2024-05-06 16:39:57,369 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=62 pTM=0.587 ipTM=0.147 tol=1.98
2024-05-06 16:40:07,461 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=61.7 pTM=0.587 ipTM=0.147 tol=4.38
2024-05-06 16:40:17,544 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=62.2 pTM=0.588 ipTM=0.148 tol=4.54
2024-05-06 16:40:27,641 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=61.8 pTM=0.587 ipTM=0.143 tol=3.4
2024-05-06 16:40:37,735 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=62.2 pTM=0.587 ipTM=0.146 tol=3.97
2024-05-06 16:40:47,842 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=62 pTM=0.586 ipTM=0.141 tol=3.28
2024-05-06 16:40:57,933 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=62.2 pTM=0.589 ipTM=0.153 tol=4.51
2024-05-06 16:41:08,034 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=61.9 pTM=0.587 ipTM=0.145 tol=3.34
2024-05-06 16:41:18,129 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=62.1 pTM=0.587 ipTM=0.148 tol=2.84
2024-05-06 16:41:28,221 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=61.8 pTM=0.587 ipTM=0.147 tol=2.8
2024-05-06 16:41:38,337 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=62.5 pTM=0.588 ipTM=0.149 tol=1.9
2024-05-06 16:41:48,431 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=61.8 pTM=0.587 ipTM=0.145 tol=3.58
2024-05-06 16:41:58,523 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=62.5 pTM=0.586 ipTM=0.145 tol=2.97
2024-05-06 16:42:08,623 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=62 pTM=0.587 ipTM=0.142 tol=4.77
2024-05-06 16:42:18,717 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=62.4 pTM=0.587 ipTM=0.144 tol=4.78
2024-05-06 16:42:28,812 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=61.8 pTM=0.586 ipTM=0.141 tol=3.1
2024-05-06 16:42:38,902 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=62.5 pTM=0.589 ipTM=0.151 tol=3.73
2024-05-06 16:42:48,999 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=61.9 pTM=0.587 ipTM=0.144 tol=3.37
2024-05-06 16:42:49,000 alphafold2_multimer_v3_model_4_seed_000 took 312.9s (30 recycles)
2024-05-06 16:42:59,364 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=61.4 pTM=0.58 ipTM=0.132
2024-05-06 16:43:09,489 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=62 pTM=0.576 ipTM=0.115 tol=10.4
2024-05-06 16:43:19,591 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=61.7 pTM=0.578 ipTM=0.117 tol=4.77
2024-05-06 16:43:29,697 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=62.3 pTM=0.577 ipTM=0.117 tol=10
2024-05-06 16:43:39,806 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=61.9 pTM=0.58 ipTM=0.128 tol=4.66
2024-05-06 16:43:49,919 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=62 pTM=0.58 ipTM=0.122 tol=4.67
2024-05-06 16:44:00,035 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=62.5 pTM=0.579 ipTM=0.119 tol=3.86
2024-05-06 16:44:10,149 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=62.4 pTM=0.579 ipTM=0.117 tol=2.78
2024-05-06 16:44:20,265 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=62.5 pTM=0.578 ipTM=0.116 tol=3.15
2024-05-06 16:44:30,391 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=62.5 pTM=0.578 ipTM=0.115 tol=3.73
2024-05-06 16:44:40,503 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=62.5 pTM=0.578 ipTM=0.115 tol=2.51
2024-05-06 16:44:50,618 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=62.3 pTM=0.579 ipTM=0.121 tol=2.97
2024-05-06 16:45:00,732 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=62.6 pTM=0.58 ipTM=0.121 tol=2.53
2024-05-06 16:45:10,846 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=62.6 pTM=0.579 ipTM=0.12 tol=1.4
2024-05-06 16:45:20,971 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=62.6 pTM=0.579 ipTM=0.121 tol=2.08
2024-05-06 16:45:31,087 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=62.7 pTM=0.58 ipTM=0.123 tol=2.76
2024-05-06 16:45:41,193 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=62.6 pTM=0.579 ipTM=0.118 tol=2.26
2024-05-06 16:45:51,313 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=62.8 pTM=0.58 ipTM=0.124 tol=2.08
2024-05-06 16:46:01,437 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=62.7 pTM=0.58 ipTM=0.122 tol=2.75
2024-05-06 16:46:11,564 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=62.5 pTM=0.58 ipTM=0.125 tol=2.94
2024-05-06 16:46:21,682 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=62.4 pTM=0.579 ipTM=0.119 tol=3.37
2024-05-06 16:46:31,802 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=62.4 pTM=0.58 ipTM=0.125 tol=2.74
2024-05-06 16:46:41,923 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=62.6 pTM=0.581 ipTM=0.123 tol=2.08
2024-05-06 16:46:52,036 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=62.7 pTM=0.579 ipTM=0.121 tol=2.73
2024-05-06 16:47:02,162 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=62.8 pTM=0.581 ipTM=0.124 tol=3
2024-05-06 16:47:12,270 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=62.7 pTM=0.581 ipTM=0.126 tol=5.45
2024-05-06 16:47:22,394 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=62.8 pTM=0.58 ipTM=0.121 tol=4.66
2024-05-06 16:47:32,522 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=62.7 pTM=0.58 ipTM=0.119 tol=2.03
2024-05-06 16:47:42,644 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=62.6 pTM=0.582 ipTM=0.128 tol=2.14
2024-05-06 16:47:52,766 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=62.7 pTM=0.58 ipTM=0.123 tol=2.25
2024-05-06 16:48:02,872 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=62.6 pTM=0.581 ipTM=0.127 tol=1.53
2024-05-06 16:48:02,873 alphafold2_multimer_v3_model_5_seed_000 took 313.6s (30 recycles)
2024-05-06 16:48:03,162 reranking models by 'multimer' metric
2024-05-06 16:48:04,795 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-05-06 16:48:26,410 Relaxation took 23.2s
2024-05-06 16:48:26,410 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=64.9 pTM=0.595 ipTM=0.194
2024-05-06 16:49:04,118 Relaxation took 37.7s
2024-05-06 16:49:04,119 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=65.3 pTM=0.596 ipTM=0.189
2024-05-06 16:50:03,740 Relaxation took 59.6s
2024-05-06 16:50:03,741 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=61.9 pTM=0.587 ipTM=0.144
2024-05-06 16:50:41,970 Relaxation took 38.2s
2024-05-06 16:50:41,970 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=62.1 pTM=0.584 ipTM=0.139
2024-05-06 16:50:59,498 Relaxation took 17.5s
2024-05-06 16:50:59,498 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=62.6 pTM=0.581 ipTM=0.127
2024-05-06 16:51:00,805 Done