2024-05-06 21:46:36,892 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-05-06 21:46:37,253 Running on GPU 2024-05-06 21:46:40,629 Found 6 citations for tools or databases 2024-05-06 21:46:40,629 Query 1/1: EPN3_FBXW7 (length 1025) 2024-05-06 21:46:42,370 Sleeping for 8s. Reason: PENDING 2024-05-06 21:46:51,790 Sleeping for 8s. Reason: RUNNING 2024-05-06 21:47:00,409 Sleeping for 10s. Reason: RUNNING 2024-05-06 21:47:11,065 Sleeping for 9s. Reason: RUNNING 2024-05-06 21:47:20,663 Sleeping for 5s. Reason: RUNNING 2024-05-06 21:47:26,280 Sleeping for 6s. Reason: RUNNING 2024-05-06 21:47:32,899 Sleeping for 6s. Reason: RUNNING 2024-05-06 21:47:39,542 Sleeping for 8s. Reason: RUNNING 2024-05-06 21:47:48,053 Sleeping for 6s. Reason: RUNNING 2024-05-06 21:47:54,604 Sleeping for 5s. Reason: RUNNING 2024-05-06 21:48:00,286 Sleeping for 7s. Reason: RUNNING 2024-05-06 21:48:07,938 Sleeping for 5s. Reason: RUNNING 2024-05-06 21:48:13,654 Sleeping for 7s. Reason: RUNNING 2024-05-06 21:48:21,300 Sleeping for 5s. Reason: RUNNING 2024-05-06 21:48:26,781 Sleeping for 10s. Reason: RUNNING 2024-05-06 21:48:37,338 Sleeping for 6s. Reason: RUNNING 2024-05-06 21:48:44,016 Sleeping for 9s. Reason: RUNNING 2024-05-06 21:48:53,782 Sleeping for 8s. Reason: RUNNING 2024-05-06 21:49:05,963 Sleeping for 7s. Reason: PENDING 2024-05-06 21:49:13,625 Sleeping for 6s. Reason: RUNNING 2024-05-06 21:49:21,041 Sleeping for 9s. Reason: RUNNING 2024-05-06 21:49:30,719 Sleeping for 6s. Reason: RUNNING 2024-05-06 21:49:37,402 Sleeping for 5s. Reason: RUNNING 2024-05-06 21:49:43,109 Sleeping for 10s. Reason: RUNNING 2024-05-06 21:49:53,830 Sleeping for 8s. Reason: RUNNING 2024-05-06 21:50:02,462 Sleeping for 6s. Reason: RUNNING 2024-05-06 21:50:09,077 Sleeping for 9s. Reason: RUNNING 2024-05-06 21:50:18,682 Sleeping for 5s. Reason: RUNNING 2024-05-06 21:50:24,318 Sleeping for 9s. Reason: RUNNING 2024-05-06 21:50:33,975 Sleeping for 10s. Reason: RUNNING 2024-05-06 21:50:51,785 Setting max_seq=508, max_extra_seq=2048 2024-05-06 21:54:51,705 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=59.8 pTM=0.492 ipTM=0.237 2024-05-06 21:55:19,485 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=61 pTM=0.507 ipTM=0.286 tol=11.7 2024-05-06 21:55:47,301 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=60.8 pTM=0.503 ipTM=0.26 tol=5.16 2024-05-06 21:56:15,188 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=61.2 pTM=0.496 ipTM=0.223 tol=5.52 2024-05-06 21:56:43,092 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=61.1 pTM=0.497 ipTM=0.242 tol=7.73 2024-05-06 21:57:11,019 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=61 pTM=0.494 ipTM=0.21 tol=6.6 2024-05-06 21:57:38,945 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=61 pTM=0.495 ipTM=0.22 tol=4.09 2024-05-06 21:58:06,905 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=61 pTM=0.496 ipTM=0.232 tol=2.21 2024-05-06 21:58:34,832 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=61 pTM=0.501 ipTM=0.237 tol=5.91 2024-05-06 21:59:02,777 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=61 pTM=0.495 ipTM=0.221 tol=7.51 2024-05-06 21:59:30,697 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=60.9 pTM=0.496 ipTM=0.224 tol=6.21 2024-05-06 21:59:58,616 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=61.1 pTM=0.495 ipTM=0.219 tol=3.73 2024-05-06 22:00:26,527 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=61.2 pTM=0.5 ipTM=0.23 tol=2.7 2024-05-06 22:00:54,451 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=60.9 pTM=0.496 ipTM=0.225 tol=5.49 2024-05-06 22:01:22,372 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=61.3 pTM=0.497 ipTM=0.228 tol=3.24 2024-05-06 22:01:50,291 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=60.9 pTM=0.494 ipTM=0.236 tol=2.27 2024-05-06 22:02:18,214 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=61 pTM=0.494 ipTM=0.232 tol=5.74 2024-05-06 22:02:46,116 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=60.7 pTM=0.493 ipTM=0.219 tol=4.98 2024-05-06 22:03:14,031 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=61.1 pTM=0.495 ipTM=0.222 tol=3.82 2024-05-06 22:03:41,930 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=61.1 pTM=0.496 ipTM=0.225 tol=4.94 2024-05-06 22:04:09,845 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=61.1 pTM=0.495 ipTM=0.264 tol=3.89 2024-05-06 22:04:37,767 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=60.9 pTM=0.495 ipTM=0.218 tol=4.55 2024-05-06 22:05:05,695 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=61 pTM=0.494 ipTM=0.228 tol=2.56 2024-05-06 22:05:33,616 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=60.9 pTM=0.492 ipTM=0.213 tol=3.59 2024-05-06 22:06:01,538 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=60.9 pTM=0.487 ipTM=0.249 tol=7.82 2024-05-06 22:06:29,460 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=60.8 pTM=0.493 ipTM=0.215 tol=8.1 2024-05-06 22:06:57,379 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=61 pTM=0.493 ipTM=0.238 tol=4.84 2024-05-06 22:07:25,304 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=60.8 pTM=0.498 ipTM=0.231 tol=6.14 2024-05-06 22:07:53,232 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=60.8 pTM=0.486 ipTM=0.224 tol=7.63 2024-05-06 22:08:21,150 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=60.8 pTM=0.497 ipTM=0.229 tol=9.42 2024-05-06 22:08:49,074 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=61.2 pTM=0.492 ipTM=0.23 tol=4.22 2024-05-06 22:08:49,075 alphafold2_multimer_v3_model_1_seed_000 took 1070.4s (30 recycles) 2024-05-06 22:09:17,892 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=61.4 pTM=0.51 ipTM=0.253 2024-05-06 22:09:45,883 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=61.8 pTM=0.511 ipTM=0.24 tol=9.52 2024-05-06 22:10:13,865 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=62.4 pTM=0.511 ipTM=0.29 tol=5.42 2024-05-06 22:10:41,854 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=62.3 pTM=0.511 ipTM=0.253 tol=2.72 2024-05-06 22:11:09,851 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=62.4 pTM=0.504 ipTM=0.242 tol=3.17 2024-05-06 22:11:37,852 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=62.4 pTM=0.51 ipTM=0.275 tol=2.98 2024-05-06 22:12:05,859 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=62.6 pTM=0.506 ipTM=0.309 tol=3.38 2024-05-06 22:12:33,878 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=62.5 pTM=0.508 ipTM=0.246 tol=3.07 2024-05-06 22:13:01,902 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=62.5 pTM=0.505 ipTM=0.23 tol=1.93 2024-05-06 22:13:29,930 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=62.5 pTM=0.505 ipTM=0.235 tol=1.89 2024-05-06 22:13:57,956 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=62.6 pTM=0.503 ipTM=0.22 tol=2.29 2024-05-06 22:14:25,966 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=62.5 pTM=0.506 ipTM=0.245 tol=1.93 2024-05-06 22:14:53,981 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=62.6 pTM=0.504 ipTM=0.229 tol=2.83 2024-05-06 22:15:21,999 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=62.4 pTM=0.507 ipTM=0.243 tol=2.52 2024-05-06 22:15:50,018 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=62.5 pTM=0.501 ipTM=0.224 tol=2.76 2024-05-06 22:16:18,044 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=62.5 pTM=0.503 ipTM=0.243 tol=2.23 2024-05-06 22:16:46,067 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=62.6 pTM=0.502 ipTM=0.223 tol=2.1 2024-05-06 22:17:14,081 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=62.6 pTM=0.504 ipTM=0.239 tol=2.34 2024-05-06 22:17:42,093 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=62.7 pTM=0.503 ipTM=0.236 tol=2.38 2024-05-06 22:18:10,109 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=62.7 pTM=0.507 ipTM=0.268 tol=2.74 2024-05-06 22:18:38,144 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=62.9 pTM=0.505 ipTM=0.288 tol=2.06 2024-05-06 22:19:06,162 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=62.6 pTM=0.506 ipTM=0.242 tol=1.85 2024-05-06 22:19:34,197 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=62.7 pTM=0.502 ipTM=0.223 tol=2.13 2024-05-06 22:20:02,244 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=62.9 pTM=0.508 ipTM=0.321 tol=2.5 2024-05-06 22:20:30,271 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=63 pTM=0.504 ipTM=0.297 tol=2.78 2024-05-06 22:20:58,299 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=62.8 pTM=0.507 ipTM=0.225 tol=2.86 2024-05-06 22:21:26,323 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=62.8 pTM=0.503 ipTM=0.224 tol=2.48 2024-05-06 22:21:54,354 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=62.8 pTM=0.507 ipTM=0.246 tol=2.76 2024-05-06 22:22:22,733 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=62.8 pTM=0.502 ipTM=0.218 tol=2.9 2024-05-06 22:22:51,481 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=62.7 pTM=0.509 ipTM=0.244 tol=2.27 2024-05-06 22:23:20,106 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=62.8 pTM=0.504 ipTM=0.261 tol=3.12 2024-05-06 22:23:20,107 alphafold2_multimer_v3_model_2_seed_000 took 870.2s (30 recycles) 2024-05-06 22:23:49,013 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=61.4 pTM=0.504 ipTM=0.248 2024-05-06 22:24:17,078 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=61.6 pTM=0.516 ipTM=0.242 tol=10.9 2024-05-06 22:24:45,105 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=61.6 pTM=0.515 ipTM=0.239 tol=5.91 2024-05-06 22:25:13,155 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=62.2 pTM=0.518 ipTM=0.241 tol=6.09 2024-05-06 22:25:41,197 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=61.9 pTM=0.516 ipTM=0.237 tol=4.18 2024-05-06 22:26:09,244 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=62.1 pTM=0.521 ipTM=0.255 tol=2.64 2024-05-06 22:26:37,310 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=61.7 pTM=0.515 ipTM=0.239 tol=2.45 2024-05-06 22:27:05,364 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=61.8 pTM=0.513 ipTM=0.236 tol=5.26 2024-05-06 22:27:33,440 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=61.8 pTM=0.516 ipTM=0.237 tol=4.02 2024-05-06 22:28:01,483 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=62.1 pTM=0.515 ipTM=0.234 tol=4.23 2024-05-06 22:28:29,554 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=62 pTM=0.518 ipTM=0.239 tol=3.69 2024-05-06 22:28:57,611 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=62.4 pTM=0.517 ipTM=0.28 tol=4.56 2024-05-06 22:29:25,701 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=62.7 pTM=0.521 ipTM=0.376 tol=2.96 2024-05-06 22:29:53,757 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=62.2 pTM=0.521 ipTM=0.281 tol=4.54 2024-05-06 22:30:21,838 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=62.1 pTM=0.514 ipTM=0.234 tol=2.87 2024-05-06 22:30:49,902 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=61.9 pTM=0.514 ipTM=0.238 tol=4.36 2024-05-06 22:31:17,984 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=62 pTM=0.517 ipTM=0.238 tol=4.41 2024-05-06 22:31:46,031 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=61.8 pTM=0.516 ipTM=0.244 tol=2.78 2024-05-06 22:32:14,099 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=62 pTM=0.519 ipTM=0.244 tol=2.83 2024-05-06 22:32:42,166 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=62 pTM=0.515 ipTM=0.24 tol=3.34 2024-05-06 22:33:10,237 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=62 pTM=0.514 ipTM=0.236 tol=2.38 2024-05-06 22:33:38,305 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=62 pTM=0.518 ipTM=0.243 tol=2.71 2024-05-06 22:34:06,368 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=61.8 pTM=0.515 ipTM=0.238 tol=3.91 2024-05-06 22:34:34,414 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=62 pTM=0.515 ipTM=0.239 tol=3.66 2024-05-06 22:35:02,497 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=61.7 pTM=0.512 ipTM=0.234 tol=3.48 2024-05-06 22:35:30,569 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=61.9 pTM=0.515 ipTM=0.238 tol=3.43 2024-05-06 22:35:58,649 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=61.8 pTM=0.519 ipTM=0.247 tol=4 2024-05-06 22:36:26,725 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=62 pTM=0.515 ipTM=0.252 tol=4.17 2024-05-06 22:36:54,775 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=61.9 pTM=0.519 ipTM=0.279 tol=2.12 2024-05-06 22:37:22,830 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=62 pTM=0.516 ipTM=0.244 tol=1.84 2024-05-06 22:37:50,907 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=61.8 pTM=0.516 ipTM=0.242 tol=3.39 2024-05-06 22:37:50,908 alphafold2_multimer_v3_model_3_seed_000 took 870.0s (30 recycles) 2024-05-06 22:38:19,757 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=60.2 pTM=0.532 ipTM=0.323 2024-05-06 22:38:47,862 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=61.5 pTM=0.511 ipTM=0.257 tol=8.67 2024-05-06 22:39:15,957 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=61.1 pTM=0.51 ipTM=0.242 tol=7.9 2024-05-06 22:39:44,042 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=61.4 pTM=0.514 ipTM=0.247 tol=4.77 2024-05-06 22:40:12,116 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=61.3 pTM=0.511 ipTM=0.239 tol=3.28 2024-05-06 22:40:40,207 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=61.2 pTM=0.512 ipTM=0.238 tol=3.68 2024-05-06 22:41:08,332 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=61.3 pTM=0.506 ipTM=0.23 tol=2.92 2024-05-06 22:41:36,422 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=61.5 pTM=0.514 ipTM=0.248 tol=4.46 2024-05-06 22:42:04,503 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=61.3 pTM=0.511 ipTM=0.236 tol=2.24 2024-05-06 22:42:32,579 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=61.5 pTM=0.512 ipTM=0.236 tol=3.74 2024-05-06 22:43:00,667 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=61.4 pTM=0.512 ipTM=0.236 tol=2.84 2024-05-06 22:43:28,768 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=61.6 pTM=0.512 ipTM=0.234 tol=2.53 2024-05-06 22:43:56,874 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=61.7 pTM=0.51 ipTM=0.231 tol=4.57 2024-05-06 22:44:24,978 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=61.5 pTM=0.516 ipTM=0.248 tol=3.34 2024-05-06 22:44:53,082 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=61.6 pTM=0.51 ipTM=0.232 tol=3.65 2024-05-06 22:45:21,182 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=61.3 pTM=0.513 ipTM=0.246 tol=3.79 2024-05-06 22:45:49,268 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=61.6 pTM=0.514 ipTM=0.244 tol=2.51 2024-05-06 22:46:17,368 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=61.4 pTM=0.513 ipTM=0.241 tol=2.75 2024-05-06 22:46:45,449 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=61.5 pTM=0.513 ipTM=0.244 tol=4.68 2024-05-06 22:47:13,566 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=61.4 pTM=0.513 ipTM=0.245 tol=2.11 2024-05-06 22:47:41,659 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=61.6 pTM=0.509 ipTM=0.234 tol=2.5 2024-05-06 22:48:09,759 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=61.3 pTM=0.511 ipTM=0.236 tol=4.64 2024-05-06 22:48:37,863 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=61.3 pTM=0.508 ipTM=0.232 tol=3.69 2024-05-06 22:49:05,955 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=61.5 pTM=0.514 ipTM=0.287 tol=4.3 2024-05-06 22:49:34,049 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=61.5 pTM=0.514 ipTM=0.343 tol=5.29 2024-05-06 22:50:02,140 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=61.4 pTM=0.513 ipTM=0.244 tol=6.32 2024-05-06 22:50:30,229 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=61.2 pTM=0.512 ipTM=0.247 tol=4.89 2024-05-06 22:50:58,316 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=61.4 pTM=0.51 ipTM=0.235 tol=4.29 2024-05-06 22:51:26,406 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=61.4 pTM=0.512 ipTM=0.24 tol=2.27 2024-05-06 22:51:54,499 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=61.6 pTM=0.513 ipTM=0.239 tol=3.93 2024-05-06 22:52:22,601 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=61.6 pTM=0.513 ipTM=0.247 tol=2.38 2024-05-06 22:52:22,602 alphafold2_multimer_v3_model_4_seed_000 took 870.9s (30 recycles) 2024-05-06 22:52:51,538 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=61.2 pTM=0.508 ipTM=0.248 2024-05-06 22:53:19,654 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=61.8 pTM=0.508 ipTM=0.273 tol=13.2 2024-05-06 22:53:47,770 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=61.9 pTM=0.508 ipTM=0.258 tol=7.8 2024-05-06 22:54:15,895 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=62.3 pTM=0.512 ipTM=0.277 tol=5.46 2024-05-06 22:54:44,006 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=62.6 pTM=0.509 ipTM=0.234 tol=4.61 2024-05-06 22:55:12,137 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=62.9 pTM=0.511 ipTM=0.262 tol=4.45 2024-05-06 22:55:40,258 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=62.8 pTM=0.504 ipTM=0.23 tol=4.89 2024-05-06 22:56:08,392 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=63.4 pTM=0.513 ipTM=0.436 tol=5.01 2024-05-06 22:56:36,523 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=63 pTM=0.516 ipTM=0.425 tol=8.11 2024-05-06 22:57:04,644 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=62.8 pTM=0.509 ipTM=0.227 tol=4.07 2024-05-06 22:57:32,767 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=62.8 pTM=0.511 ipTM=0.261 tol=5.59 2024-05-06 22:58:00,897 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=63.1 pTM=0.514 ipTM=0.376 tol=3.45 2024-05-06 22:58:29,021 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=63.5 pTM=0.519 ipTM=0.484 tol=4.66 2024-05-06 22:58:57,164 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=62.5 pTM=0.509 ipTM=0.234 tol=6.78 2024-05-06 22:59:25,290 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=62.8 pTM=0.508 ipTM=0.228 tol=4.36 2024-05-06 22:59:53,422 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=62.7 pTM=0.508 ipTM=0.276 tol=5.98 2024-05-06 23:00:21,548 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=62.7 pTM=0.51 ipTM=0.249 tol=5.61 2024-05-06 23:00:49,672 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=62.5 pTM=0.508 ipTM=0.279 tol=5.68 2024-05-06 23:01:17,795 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=62.8 pTM=0.513 ipTM=0.279 tol=2.92 2024-05-06 23:01:45,910 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=62.7 pTM=0.51 ipTM=0.255 tol=3.3 2024-05-06 23:02:14,021 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=62.9 pTM=0.509 ipTM=0.243 tol=3.85 2024-05-06 23:02:42,139 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=62.7 pTM=0.512 ipTM=0.271 tol=3.64 2024-05-06 23:03:10,290 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=62.6 pTM=0.51 ipTM=0.245 tol=4.88 2024-05-06 23:03:38,396 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=62.7 pTM=0.509 ipTM=0.281 tol=4.43 2024-05-06 23:04:06,485 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=62.6 pTM=0.507 ipTM=0.23 tol=3.63 2024-05-06 23:04:34,596 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=62.6 pTM=0.508 ipTM=0.266 tol=2.99 2024-05-06 23:05:02,685 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=62.5 pTM=0.507 ipTM=0.218 tol=3.71 2024-05-06 23:05:30,797 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=62.5 pTM=0.508 ipTM=0.225 tol=4.35 2024-05-06 23:05:58,899 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=62.6 pTM=0.511 ipTM=0.228 tol=3.8 2024-05-06 23:06:27,055 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=62.8 pTM=0.512 ipTM=0.329 tol=3.69 2024-05-06 23:06:55,209 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=62.6 pTM=0.511 ipTM=0.3 tol=3.64 2024-05-06 23:06:55,210 alphafold2_multimer_v3_model_5_seed_000 took 871.8s (30 recycles) 2024-05-06 23:06:56,032 reranking models by 'multimer' metric 2024-05-06 23:07:00,560 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-05-06 23:09:24,067 Relaxation took 148.0s 2024-05-06 23:09:24,084 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=62.6 pTM=0.511 ipTM=0.3 2024-05-06 23:12:21,926 Relaxation took 177.8s 2024-05-06 23:12:21,926 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=62.8 pTM=0.504 ipTM=0.261 2024-05-06 23:14:40,146 Relaxation took 138.2s 2024-05-06 23:14:40,146 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=61.6 pTM=0.513 ipTM=0.247 2024-05-06 23:17:03,179 Relaxation took 143.0s 2024-05-06 23:17:03,179 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=61.8 pTM=0.516 ipTM=0.242 2024-05-06 23:20:16,132 Relaxation took 193.0s 2024-05-06 23:20:16,132 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=61.2 pTM=0.492 ipTM=0.23 2024-05-06 23:20:19,123 Done