2024-05-07 00:22:30,416 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-05-07 00:22:30,745 Running on GPU
2024-05-07 00:22:34,157 Found 6 citations for tools or databases
2024-05-07 00:22:34,158 Query 1/1: GATA2_SKP1 (length 629)
2024-05-07 00:22:34,755 Sleeping for 6s. Reason: PENDING
2024-05-07 00:22:41,342 Sleeping for 5s. Reason: RUNNING
2024-05-07 00:22:46,983 Sleeping for 9s. Reason: RUNNING
2024-05-07 00:22:56,465 Sleeping for 8s. Reason: RUNNING
2024-05-07 00:23:04,945 Sleeping for 6s. Reason: RUNNING
2024-05-07 00:23:11,490 Sleeping for 6s. Reason: RUNNING
2024-05-07 00:23:18,041 Sleeping for 10s. Reason: RUNNING
2024-05-07 00:23:28,610 Sleeping for 7s. Reason: RUNNING
2024-05-07 00:23:39,050 Sleeping for 9s. Reason: PENDING
2024-05-07 00:23:48,479 Sleeping for 7s. Reason: RUNNING
2024-05-07 00:23:56,004 Sleeping for 8s. Reason: RUNNING
2024-05-07 00:24:07,357 Setting max_seq=508, max_extra_seq=2048
2024-05-07 00:27:02,966 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=41.2 pTM=0.323 ipTM=0.188
2024-05-07 00:27:10,881 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=41.2 pTM=0.321 ipTM=0.223 tol=17.8
2024-05-07 00:27:18,806 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=41 pTM=0.318 ipTM=0.233 tol=13.8
2024-05-07 00:27:26,743 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=41.3 pTM=0.322 ipTM=0.245 tol=10.4
2024-05-07 00:27:34,679 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=42.1 pTM=0.317 ipTM=0.229 tol=7.68
2024-05-07 00:27:42,622 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=42.7 pTM=0.316 ipTM=0.228 tol=6.44
2024-05-07 00:27:50,572 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=42.7 pTM=0.317 ipTM=0.231 tol=5.61
2024-05-07 00:27:58,513 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=42.3 pTM=0.314 ipTM=0.218 tol=6.03
2024-05-07 00:28:06,467 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=42.4 pTM=0.317 ipTM=0.24 tol=4.74
2024-05-07 00:28:14,419 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=42.7 pTM=0.317 ipTM=0.237 tol=3.22
2024-05-07 00:28:22,382 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=42.3 pTM=0.318 ipTM=0.236 tol=5.89
2024-05-07 00:28:30,344 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=42.5 pTM=0.319 ipTM=0.25 tol=4.39
2024-05-07 00:28:38,315 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=42.8 pTM=0.317 ipTM=0.234 tol=3.58
2024-05-07 00:28:46,283 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=42.4 pTM=0.315 ipTM=0.237 tol=2.98
2024-05-07 00:28:54,259 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=42.3 pTM=0.314 ipTM=0.24 tol=4.6
2024-05-07 00:29:02,235 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=42 pTM=0.314 ipTM=0.232 tol=5.59
2024-05-07 00:29:10,213 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=42.1 pTM=0.313 ipTM=0.219 tol=5.11
2024-05-07 00:29:18,189 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=42.1 pTM=0.315 ipTM=0.227 tol=4.36
2024-05-07 00:29:26,168 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=42.3 pTM=0.315 ipTM=0.23 tol=3.08
2024-05-07 00:29:34,143 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=42.5 pTM=0.316 ipTM=0.24 tol=4.94
2024-05-07 00:29:42,117 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=42.7 pTM=0.318 ipTM=0.245 tol=2.52
2024-05-07 00:29:50,095 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=42.5 pTM=0.318 ipTM=0.254 tol=4.61
2024-05-07 00:29:58,075 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=42.6 pTM=0.32 ipTM=0.242 tol=5.2
2024-05-07 00:30:06,063 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=42.3 pTM=0.319 ipTM=0.249 tol=3.56
2024-05-07 00:30:14,051 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=42.3 pTM=0.319 ipTM=0.254 tol=3.18
2024-05-07 00:30:22,029 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=42.4 pTM=0.317 ipTM=0.244 tol=3.27
2024-05-07 00:30:30,011 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=42.6 pTM=0.316 ipTM=0.231 tol=3.15
2024-05-07 00:30:37,994 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=42.3 pTM=0.317 ipTM=0.244 tol=4.06
2024-05-07 00:30:45,976 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=42.7 pTM=0.317 ipTM=0.238 tol=4.54
2024-05-07 00:30:53,956 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=42.3 pTM=0.315 ipTM=0.24 tol=3.09
2024-05-07 00:31:01,933 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=42.3 pTM=0.317 ipTM=0.234 tol=4.22
2024-05-07 00:31:01,934 alphafold2_multimer_v3_model_1_seed_000 took 409.2s (30 recycles)
2024-05-07 00:31:10,175 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=42.5 pTM=0.307 ipTM=0.157
2024-05-07 00:31:18,154 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=42.2 pTM=0.317 ipTM=0.197 tol=28.2
2024-05-07 00:31:26,151 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=41.9 pTM=0.32 ipTM=0.231 tol=18.8
2024-05-07 00:31:34,150 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=41.8 pTM=0.325 ipTM=0.257 tol=11.7
2024-05-07 00:31:42,148 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=42.1 pTM=0.319 ipTM=0.261 tol=9.2
2024-05-07 00:31:50,139 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=42.4 pTM=0.324 ipTM=0.276 tol=7.56
2024-05-07 00:31:58,136 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=42.2 pTM=0.321 ipTM=0.281 tol=4.87
2024-05-07 00:32:06,125 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=41.9 pTM=0.321 ipTM=0.26 tol=2.84
2024-05-07 00:32:14,108 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=42.1 pTM=0.322 ipTM=0.273 tol=3.28
2024-05-07 00:32:22,094 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=42.2 pTM=0.322 ipTM=0.277 tol=1.86
2024-05-07 00:32:30,088 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=42 pTM=0.321 ipTM=0.279 tol=2.25
2024-05-07 00:32:38,069 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=42 pTM=0.323 ipTM=0.292 tol=3.69
2024-05-07 00:32:46,061 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=42.1 pTM=0.32 ipTM=0.284 tol=2.7
2024-05-07 00:32:54,053 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=42.1 pTM=0.321 ipTM=0.282 tol=2.3
2024-05-07 00:33:02,047 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=42 pTM=0.319 ipTM=0.281 tol=2.89
2024-05-07 00:33:10,051 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=41.8 pTM=0.319 ipTM=0.277 tol=3.25
2024-05-07 00:33:18,040 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=41.8 pTM=0.318 ipTM=0.273 tol=3.26
2024-05-07 00:33:26,029 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=41.8 pTM=0.318 ipTM=0.269 tol=2.01
2024-05-07 00:33:34,024 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=42.1 pTM=0.319 ipTM=0.274 tol=2.71
2024-05-07 00:33:42,011 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=42.1 pTM=0.319 ipTM=0.282 tol=3.35
2024-05-07 00:33:50,004 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=42.2 pTM=0.323 ipTM=0.287 tol=3.27
2024-05-07 00:33:57,997 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=42.4 pTM=0.323 ipTM=0.3 tol=4.41
2024-05-07 00:34:05,998 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=42.2 pTM=0.322 ipTM=0.282 tol=4.78
2024-05-07 00:34:13,991 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=42 pTM=0.321 ipTM=0.287 tol=3.28
2024-05-07 00:34:21,993 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=42 pTM=0.321 ipTM=0.29 tol=3.16
2024-05-07 00:34:29,986 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=41.9 pTM=0.32 ipTM=0.271 tol=3.17
2024-05-07 00:34:37,977 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=41.9 pTM=0.318 ipTM=0.269 tol=3.12
2024-05-07 00:34:45,971 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=42.2 pTM=0.321 ipTM=0.274 tol=3.29
2024-05-07 00:34:53,964 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=42.2 pTM=0.32 ipTM=0.27 tol=2
2024-05-07 00:35:01,952 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=42 pTM=0.318 ipTM=0.269 tol=1.92
2024-05-07 00:35:09,947 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=42 pTM=0.32 ipTM=0.279 tol=2.74
2024-05-07 00:35:09,948 alphafold2_multimer_v3_model_2_seed_000 took 247.8s (30 recycles)
2024-05-07 00:35:18,246 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=39.5 pTM=0.316 ipTM=0.184
2024-05-07 00:35:26,284 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=41.3 pTM=0.304 ipTM=0.164 tol=22.6
2024-05-07 00:35:34,340 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=41.2 pTM=0.309 ipTM=0.165 tol=15.7
2024-05-07 00:35:42,396 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=41.5 pTM=0.308 ipTM=0.162 tol=7.46
2024-05-07 00:35:50,461 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=41.7 pTM=0.308 ipTM=0.156 tol=4.67
2024-05-07 00:35:58,524 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=41.5 pTM=0.304 ipTM=0.151 tol=3.53
2024-05-07 00:36:06,589 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=41.3 pTM=0.304 ipTM=0.156 tol=3.38
2024-05-07 00:36:14,658 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=41.4 pTM=0.302 ipTM=0.147 tol=3.91
2024-05-07 00:36:22,727 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=41.5 pTM=0.304 ipTM=0.152 tol=7.41
2024-05-07 00:36:30,795 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=41.4 pTM=0.304 ipTM=0.15 tol=8.82
2024-05-07 00:36:38,859 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=41.9 pTM=0.305 ipTM=0.154 tol=6.98
2024-05-07 00:36:46,922 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=41.6 pTM=0.305 ipTM=0.159 tol=10.4
2024-05-07 00:36:54,989 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=41.8 pTM=0.304 ipTM=0.154 tol=7.91
2024-05-07 00:37:03,049 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=41.2 pTM=0.302 ipTM=0.147 tol=6.13
2024-05-07 00:37:11,112 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=41.1 pTM=0.299 ipTM=0.145 tol=4.44
2024-05-07 00:37:19,175 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=41.1 pTM=0.3 ipTM=0.148 tol=4.56
2024-05-07 00:37:27,244 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=41.1 pTM=0.299 ipTM=0.15 tol=5.55
2024-05-07 00:37:35,344 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=40.1 pTM=0.296 ipTM=0.146 tol=4.88
2024-05-07 00:37:43,409 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=40.1 pTM=0.292 ipTM=0.139 tol=4.33
2024-05-07 00:37:51,475 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=39.9 pTM=0.292 ipTM=0.148 tol=9.02
2024-05-07 00:37:59,543 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=40.3 pTM=0.294 ipTM=0.153 tol=6.78
2024-05-07 00:38:07,603 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=40.3 pTM=0.297 ipTM=0.15 tol=4.16
2024-05-07 00:38:15,670 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=40.9 pTM=0.298 ipTM=0.151 tol=4.38
2024-05-07 00:38:23,738 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=40.7 pTM=0.299 ipTM=0.16 tol=7.34
2024-05-07 00:38:31,807 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=41 pTM=0.301 ipTM=0.174 tol=9.79
2024-05-07 00:38:39,854 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=40.9 pTM=0.305 ipTM=0.166 tol=10.7
2024-05-07 00:38:47,908 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=41.4 pTM=0.304 ipTM=0.17 tol=8.22
2024-05-07 00:38:55,940 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=41.2 pTM=0.303 ipTM=0.176 tol=6.13
2024-05-07 00:39:03,975 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=41.2 pTM=0.304 ipTM=0.179 tol=6.54
2024-05-07 00:39:12,017 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=40.9 pTM=0.303 ipTM=0.176 tol=7.59
2024-05-07 00:39:20,066 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=41.3 pTM=0.305 ipTM=0.18 tol=12.6
2024-05-07 00:39:20,067 alphafold2_multimer_v3_model_3_seed_000 took 249.9s (30 recycles)
2024-05-07 00:39:28,399 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=40.4 pTM=0.293 ipTM=0.131
2024-05-07 00:39:36,420 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=41.7 pTM=0.309 ipTM=0.238 tol=21.6
2024-05-07 00:39:44,456 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=41.5 pTM=0.311 ipTM=0.256 tol=11.1
2024-05-07 00:39:52,489 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=41.4 pTM=0.313 ipTM=0.26 tol=7.58
2024-05-07 00:40:00,529 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=42 pTM=0.311 ipTM=0.243 tol=5.88
2024-05-07 00:40:08,569 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=42.1 pTM=0.312 ipTM=0.245 tol=5.25
2024-05-07 00:40:16,613 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=41.8 pTM=0.31 ipTM=0.241 tol=3.86
2024-05-07 00:40:24,662 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=41.8 pTM=0.31 ipTM=0.226 tol=6.29
2024-05-07 00:40:32,707 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=42.1 pTM=0.311 ipTM=0.242 tol=9.45
2024-05-07 00:40:40,749 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=41.9 pTM=0.309 ipTM=0.236 tol=8.52
2024-05-07 00:40:48,814 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=41.7 pTM=0.309 ipTM=0.242 tol=3.14
2024-05-07 00:40:56,868 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=41.5 pTM=0.311 ipTM=0.258 tol=6.48
2024-05-07 00:41:04,928 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=41.6 pTM=0.308 ipTM=0.241 tol=3.22
2024-05-07 00:41:12,982 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=41.2 pTM=0.303 ipTM=0.242 tol=6.86
2024-05-07 00:41:21,037 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=41.3 pTM=0.306 ipTM=0.24 tol=3.47
2024-05-07 00:41:29,090 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=41.3 pTM=0.305 ipTM=0.24 tol=6.75
2024-05-07 00:41:37,135 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=41.4 pTM=0.305 ipTM=0.235 tol=6.57
2024-05-07 00:41:45,182 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=41.2 pTM=0.305 ipTM=0.232 tol=2.19
2024-05-07 00:41:53,227 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=41.3 pTM=0.308 ipTM=0.243 tol=3.59
2024-05-07 00:42:01,270 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=41.9 pTM=0.309 ipTM=0.242 tol=3.14
2024-05-07 00:42:09,317 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=41.8 pTM=0.31 ipTM=0.24 tol=5.68
2024-05-07 00:42:17,355 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=41.6 pTM=0.309 ipTM=0.235 tol=6.36
2024-05-07 00:42:25,400 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=42.1 pTM=0.312 ipTM=0.243 tol=6.64
2024-05-07 00:42:33,441 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=41.9 pTM=0.312 ipTM=0.244 tol=6.52
2024-05-07 00:42:41,489 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=41.9 pTM=0.312 ipTM=0.251 tol=3.18
2024-05-07 00:42:49,530 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=41.7 pTM=0.311 ipTM=0.25 tol=2.08
2024-05-07 00:42:57,576 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=41.9 pTM=0.31 ipTM=0.241 tol=6.94
2024-05-07 00:43:05,622 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=41.9 pTM=0.31 ipTM=0.242 tol=6.8
2024-05-07 00:43:13,668 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=41.9 pTM=0.308 ipTM=0.223 tol=6.04
2024-05-07 00:43:21,715 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=41.5 pTM=0.306 ipTM=0.222 tol=3.38
2024-05-07 00:43:29,758 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=41.1 pTM=0.308 ipTM=0.227 tol=3.06
2024-05-07 00:43:29,759 alphafold2_multimer_v3_model_4_seed_000 took 249.4s (30 recycles)
2024-05-07 00:43:38,104 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=38.6 pTM=0.287 ipTM=0.164
2024-05-07 00:43:46,183 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=40.2 pTM=0.292 ipTM=0.162 tol=14.1
2024-05-07 00:43:54,260 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=41.2 pTM=0.307 ipTM=0.186 tol=14.1
2024-05-07 00:44:02,337 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=42 pTM=0.316 ipTM=0.195 tol=10.8
2024-05-07 00:44:10,415 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=42.1 pTM=0.314 ipTM=0.183 tol=13
2024-05-07 00:44:18,493 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=42.4 pTM=0.316 ipTM=0.178 tol=6.14
2024-05-07 00:44:26,569 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=42.2 pTM=0.314 ipTM=0.189 tol=7.87
2024-05-07 00:44:34,644 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=41.5 pTM=0.309 ipTM=0.172 tol=11.8
2024-05-07 00:44:42,719 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=41.7 pTM=0.309 ipTM=0.173 tol=12.7
2024-05-07 00:44:50,796 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=41.8 pTM=0.309 ipTM=0.175 tol=5.65
2024-05-07 00:44:58,875 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=41.7 pTM=0.311 ipTM=0.179 tol=12.5
2024-05-07 00:45:06,961 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=41.8 pTM=0.309 ipTM=0.183 tol=14.9
2024-05-07 00:45:15,037 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=41.6 pTM=0.308 ipTM=0.177 tol=5.26
2024-05-07 00:45:23,116 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=41.3 pTM=0.308 ipTM=0.194 tol=4.61
2024-05-07 00:45:31,197 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=42.2 pTM=0.316 ipTM=0.251 tol=4.75
2024-05-07 00:45:39,282 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=42.7 pTM=0.321 ipTM=0.307 tol=5.04
2024-05-07 00:45:47,362 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=42.8 pTM=0.324 ipTM=0.317 tol=8.88
2024-05-07 00:45:55,450 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=42.5 pTM=0.321 ipTM=0.322 tol=8.95
2024-05-07 00:46:03,536 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=43.3 pTM=0.329 ipTM=0.357 tol=10.4
2024-05-07 00:46:11,618 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=42.8 pTM=0.322 ipTM=0.294 tol=10.5
2024-05-07 00:46:19,700 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=41.7 pTM=0.312 ipTM=0.221 tol=4.88
2024-05-07 00:46:27,780 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=42.1 pTM=0.315 ipTM=0.273 tol=10.4
2024-05-07 00:46:35,865 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=42.6 pTM=0.322 ipTM=0.284 tol=7.55
2024-05-07 00:46:43,958 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=41.7 pTM=0.309 ipTM=0.207 tol=8.43
2024-05-07 00:46:52,043 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=41.5 pTM=0.309 ipTM=0.196 tol=8.77
2024-05-07 00:47:00,127 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=41.9 pTM=0.311 ipTM=0.238 tol=5.85
2024-05-07 00:47:08,210 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=42.6 pTM=0.32 ipTM=0.312 tol=8.12
2024-05-07 00:47:16,299 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=42.8 pTM=0.322 ipTM=0.311 tol=7.5
2024-05-07 00:47:24,386 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=41.6 pTM=0.312 ipTM=0.215 tol=5.41
2024-05-07 00:47:32,468 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=41.5 pTM=0.308 ipTM=0.179 tol=6.38
2024-05-07 00:47:40,552 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=41.8 pTM=0.312 ipTM=0.189 tol=12.6
2024-05-07 00:47:40,553 alphafold2_multimer_v3_model_5_seed_000 took 250.5s (30 recycles)
2024-05-07 00:47:40,812 reranking models by 'multimer' metric
2024-05-07 00:47:43,527 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-05-07 00:48:43,162 Relaxation took 62.3s
2024-05-07 00:48:43,163 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=42 pTM=0.32 ipTM=0.279
2024-05-07 00:49:27,230 Relaxation took 44.1s
2024-05-07 00:49:27,230 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=42.3 pTM=0.317 ipTM=0.234
2024-05-07 00:50:12,575 Relaxation took 45.3s
2024-05-07 00:50:12,575 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=41.1 pTM=0.308 ipTM=0.227
2024-05-07 00:51:04,680 Relaxation took 52.1s
2024-05-07 00:51:04,681 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=41.8 pTM=0.312 ipTM=0.189
2024-05-07 00:51:48,750 Relaxation took 44.1s
2024-05-07 00:51:48,750 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=41.3 pTM=0.305 ipTM=0.18
2024-05-07 00:51:49,871 Done