2024-05-07 01:48:11,468 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-05-07 01:48:12,218 Running on GPU 2024-05-07 01:48:16,029 Found 6 citations for tools or databases 2024-05-07 01:48:16,029 Query 1/1: NDUFV3_FBXW7 (length 1180) 2024-05-07 01:48:28,698 Setting max_seq=508, max_extra_seq=2048 2024-05-07 01:51:10,002 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=47.4 pTM=0.442 ipTM=0.174 2024-05-07 01:51:42,915 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=48.3 pTM=0.453 ipTM=0.183 tol=16.9 2024-05-07 01:52:15,933 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=48.2 pTM=0.447 ipTM=0.187 tol=10.8 2024-05-07 01:52:49,034 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=48.3 pTM=0.443 ipTM=0.182 tol=8.32 2024-05-07 01:53:22,163 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=48 pTM=0.443 ipTM=0.182 tol=11.4 2024-05-07 01:53:55,318 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=48 pTM=0.449 ipTM=0.197 tol=6.85 2024-05-07 01:54:28,492 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=48.1 pTM=0.452 ipTM=0.204 tol=5.16 2024-05-07 01:55:01,666 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=47.9 pTM=0.451 ipTM=0.21 tol=5.11 2024-05-07 01:55:34,847 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=48 pTM=0.453 ipTM=0.261 tol=3.2 2024-05-07 01:56:08,020 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=48 pTM=0.454 ipTM=0.282 tol=6.62 2024-05-07 01:56:41,200 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=48.2 pTM=0.459 ipTM=0.315 tol=6.27 2024-05-07 01:57:14,396 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=48.2 pTM=0.458 ipTM=0.285 tol=5.7 2024-05-07 01:57:47,591 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=48.2 pTM=0.458 ipTM=0.308 tol=4.27 2024-05-07 01:58:20,782 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=48.1 pTM=0.456 ipTM=0.271 tol=7.42 2024-05-07 01:58:53,970 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=48.2 pTM=0.457 ipTM=0.277 tol=6.12 2024-05-07 01:59:27,149 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=48 pTM=0.457 ipTM=0.285 tol=5.34 2024-05-07 02:00:00,319 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=48.2 pTM=0.457 ipTM=0.309 tol=9.91 2024-05-07 02:00:33,534 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=48.2 pTM=0.457 ipTM=0.271 tol=6.66 2024-05-07 02:01:06,702 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=48.1 pTM=0.456 ipTM=0.272 tol=6.26 2024-05-07 02:01:39,906 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=48 pTM=0.456 ipTM=0.256 tol=10 2024-05-07 02:02:13,111 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=48.1 pTM=0.455 ipTM=0.254 tol=8.09 2024-05-07 02:02:46,312 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=48.1 pTM=0.456 ipTM=0.273 tol=4.25 2024-05-07 02:03:19,475 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=47.9 pTM=0.452 ipTM=0.262 tol=8.25 2024-05-07 02:03:52,670 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=48.2 pTM=0.458 ipTM=0.3 tol=8.29 2024-05-07 02:04:25,858 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=48 pTM=0.453 ipTM=0.272 tol=5.61 2024-05-07 02:04:59,057 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=48.1 pTM=0.457 ipTM=0.303 tol=8.17 2024-05-07 02:05:32,308 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=48.1 pTM=0.455 ipTM=0.281 tol=10 2024-05-07 02:06:05,506 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=48.1 pTM=0.459 ipTM=0.257 tol=7.09 2024-05-07 02:06:38,703 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=48 pTM=0.456 ipTM=0.262 tol=5.08 2024-05-07 02:07:11,908 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=48 pTM=0.457 ipTM=0.25 tol=3.87 2024-05-07 02:07:45,092 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=47.9 pTM=0.453 ipTM=0.255 tol=3.2 2024-05-07 02:07:45,094 alphafold2_multimer_v3_model_1_seed_000 took 1151.1s (30 recycles) 2024-05-07 02:08:19,037 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=47.7 pTM=0.451 ipTM=0.176 2024-05-07 02:08:52,165 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=48.4 pTM=0.455 ipTM=0.17 tol=15.7 2024-05-07 02:09:25,344 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=48.6 pTM=0.455 ipTM=0.172 tol=8 2024-05-07 02:09:58,539 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=48.8 pTM=0.455 ipTM=0.169 tol=6.98 2024-05-07 02:10:31,693 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=48.8 pTM=0.454 ipTM=0.167 tol=5.88 2024-05-07 02:11:04,900 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=48.9 pTM=0.455 ipTM=0.173 tol=7.49 2024-05-07 02:11:38,106 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=48.9 pTM=0.455 ipTM=0.172 tol=8.81 2024-05-07 02:12:11,306 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=48.8 pTM=0.455 ipTM=0.167 tol=3.95 2024-05-07 02:12:44,515 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=48.8 pTM=0.454 ipTM=0.17 tol=4.4 2024-05-07 02:13:17,715 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=48.8 pTM=0.453 ipTM=0.168 tol=4.75 2024-05-07 02:13:50,886 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=48.8 pTM=0.453 ipTM=0.171 tol=4.64 2024-05-07 02:14:24,061 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=48.8 pTM=0.454 ipTM=0.173 tol=3.37 2024-05-07 02:14:57,233 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=48.8 pTM=0.454 ipTM=0.17 tol=3.59 2024-05-07 02:15:30,420 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=48.8 pTM=0.454 ipTM=0.171 tol=2.08 2024-05-07 02:16:03,636 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=48.8 pTM=0.454 ipTM=0.173 tol=1.95 2024-05-07 02:16:36,836 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=48.9 pTM=0.455 ipTM=0.171 tol=2.3 2024-05-07 02:17:10,067 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=48.9 pTM=0.455 ipTM=0.173 tol=2.88 2024-05-07 02:17:43,277 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=48.9 pTM=0.456 ipTM=0.173 tol=3.21 2024-05-07 02:18:16,481 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=48.8 pTM=0.455 ipTM=0.172 tol=2.08 2024-05-07 02:18:49,675 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=48.7 pTM=0.453 ipTM=0.172 tol=2.71 2024-05-07 02:19:22,903 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=48.8 pTM=0.454 ipTM=0.172 tol=2.83 2024-05-07 02:19:56,110 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=48.7 pTM=0.453 ipTM=0.168 tol=1.71 2024-05-07 02:20:29,302 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=48.8 pTM=0.453 ipTM=0.169 tol=2.46 2024-05-07 02:21:02,493 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=48.7 pTM=0.452 ipTM=0.169 tol=1.88 2024-05-07 02:21:35,671 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=48.7 pTM=0.452 ipTM=0.168 tol=2.44 2024-05-07 02:22:08,873 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=48.8 pTM=0.455 ipTM=0.172 tol=1.95 2024-05-07 02:22:42,088 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=48.9 pTM=0.456 ipTM=0.171 tol=1.66 2024-05-07 02:23:15,298 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=48.8 pTM=0.455 ipTM=0.173 tol=2.44 2024-05-07 02:23:48,536 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=48.8 pTM=0.455 ipTM=0.172 tol=2.91 2024-05-07 02:24:21,741 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=48.8 pTM=0.453 ipTM=0.171 tol=4.29 2024-05-07 02:24:54,943 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=48.7 pTM=0.453 ipTM=0.169 tol=2.69 2024-05-07 02:24:54,944 alphafold2_multimer_v3_model_2_seed_000 took 1029.0s (30 recycles) 2024-05-07 02:25:29,070 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=47.7 pTM=0.453 ipTM=0.165 2024-05-07 02:26:02,345 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=48.4 pTM=0.462 ipTM=0.195 tol=15.2 2024-05-07 02:26:35,635 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=48.4 pTM=0.463 ipTM=0.195 tol=8.22 2024-05-07 02:27:08,938 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=48.5 pTM=0.464 ipTM=0.196 tol=7.27 2024-05-07 02:27:42,287 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=48.5 pTM=0.463 ipTM=0.195 tol=4.39 2024-05-07 02:28:15,611 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=48.6 pTM=0.464 ipTM=0.199 tol=3.5 2024-05-07 02:28:48,979 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=48.8 pTM=0.464 ipTM=0.199 tol=7.39 2024-05-07 02:29:22,327 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=48.8 pTM=0.465 ipTM=0.197 tol=3.21 2024-05-07 02:29:55,655 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=48.9 pTM=0.465 ipTM=0.202 tol=5.04 2024-05-07 02:30:28,969 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=49 pTM=0.465 ipTM=0.201 tol=4.1 2024-05-07 02:31:02,290 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=48.9 pTM=0.466 ipTM=0.2 tol=3.71 2024-05-07 02:31:35,595 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=49 pTM=0.468 ipTM=0.205 tol=1.92 2024-05-07 02:32:08,901 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=48.9 pTM=0.466 ipTM=0.199 tol=2.05 2024-05-07 02:32:42,216 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=48.9 pTM=0.467 ipTM=0.197 tol=2.11 2024-05-07 02:33:15,562 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=48.9 pTM=0.467 ipTM=0.204 tol=2.17 2024-05-07 02:33:48,906 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=48.8 pTM=0.466 ipTM=0.197 tol=1.53 2024-05-07 02:34:22,281 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=48.8 pTM=0.465 ipTM=0.201 tol=1.94 2024-05-07 02:34:55,661 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=48.9 pTM=0.467 ipTM=0.202 tol=1.93 2024-05-07 02:35:29,012 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=48.8 pTM=0.466 ipTM=0.202 tol=2.05 2024-05-07 02:36:02,367 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=48.7 pTM=0.463 ipTM=0.203 tol=2.08 2024-05-07 02:36:35,716 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=48.7 pTM=0.464 ipTM=0.2 tol=2.18 2024-05-07 02:37:09,042 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=48.8 pTM=0.466 ipTM=0.197 tol=1.87 2024-05-07 02:37:42,358 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=48.7 pTM=0.463 ipTM=0.196 tol=2.24 2024-05-07 02:38:15,692 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=48.9 pTM=0.466 ipTM=0.199 tol=2 2024-05-07 02:38:49,021 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=48.8 pTM=0.466 ipTM=0.196 tol=2.41 2024-05-07 02:39:22,376 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=49 pTM=0.468 ipTM=0.198 tol=2.4 2024-05-07 02:39:55,710 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=49 pTM=0.468 ipTM=0.199 tol=2.73 2024-05-07 02:40:29,075 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=48.9 pTM=0.468 ipTM=0.202 tol=1.78 2024-05-07 02:41:02,420 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=48.9 pTM=0.467 ipTM=0.202 tol=1.64 2024-05-07 02:41:35,763 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=48.8 pTM=0.465 ipTM=0.197 tol=1.84 2024-05-07 02:42:09,097 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=48.8 pTM=0.466 ipTM=0.2 tol=1.84 2024-05-07 02:42:09,098 alphafold2_multimer_v3_model_3_seed_000 took 1033.3s (30 recycles) 2024-05-07 02:42:43,340 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=47 pTM=0.45 ipTM=0.185 2024-05-07 02:43:16,732 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=48.3 pTM=0.464 ipTM=0.206 tol=18.1 2024-05-07 02:43:50,128 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=48.3 pTM=0.465 ipTM=0.197 tol=11.5 2024-05-07 02:44:23,607 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=48.4 pTM=0.461 ipTM=0.216 tol=23.3 2024-05-07 02:44:57,083 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=48.1 pTM=0.457 ipTM=0.201 tol=17.4 2024-05-07 02:45:30,548 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=48.5 pTM=0.465 ipTM=0.198 tol=11.6 2024-05-07 02:46:04,010 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=48.4 pTM=0.461 ipTM=0.194 tol=12.3 2024-05-07 02:46:37,450 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=48.2 pTM=0.461 ipTM=0.192 tol=11.8 2024-05-07 02:47:10,871 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=48.5 pTM=0.457 ipTM=0.193 tol=12.9 2024-05-07 02:47:44,316 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=48.2 pTM=0.46 ipTM=0.206 tol=7.94 2024-05-07 02:48:17,753 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=48.3 pTM=0.459 ipTM=0.191 tol=12.8 2024-05-07 02:48:51,238 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=48.4 pTM=0.467 ipTM=0.259 tol=15 2024-05-07 02:49:24,793 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=48.1 pTM=0.459 ipTM=0.196 tol=16.5 2024-05-07 02:49:58,285 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=48.5 pTM=0.467 ipTM=0.197 tol=13 2024-05-07 02:50:31,727 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=48.6 pTM=0.468 ipTM=0.198 tol=8.77 2024-05-07 02:51:05,193 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=48.6 pTM=0.467 ipTM=0.196 tol=9.14 2024-05-07 02:51:38,659 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=48.6 pTM=0.468 ipTM=0.22 tol=4.64 2024-05-07 02:52:12,149 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=48.4 pTM=0.462 ipTM=0.197 tol=9.21 2024-05-07 02:52:45,567 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=48.3 pTM=0.464 ipTM=0.196 tol=10.6 2024-05-07 02:53:19,090 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=48.2 pTM=0.464 ipTM=0.294 tol=21.1 2024-05-07 02:53:52,588 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=48.3 pTM=0.462 ipTM=0.195 tol=10.5 2024-05-07 02:54:26,176 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=48.2 pTM=0.459 ipTM=0.198 tol=16.1 2024-05-07 02:54:59,667 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=48.2 pTM=0.463 ipTM=0.195 tol=10.3 2024-05-07 02:55:33,143 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=48.5 pTM=0.464 ipTM=0.194 tol=9.21 2024-05-07 02:56:06,587 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=48.4 pTM=0.464 ipTM=0.194 tol=8.43 2024-05-07 02:56:40,049 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=48.6 pTM=0.46 ipTM=0.195 tol=8.12 2024-05-07 02:57:13,503 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=48.4 pTM=0.466 ipTM=0.196 tol=7.81 2024-05-07 02:57:46,960 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=48.6 pTM=0.46 ipTM=0.194 tol=10.8 2024-05-07 02:58:20,442 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=48.3 pTM=0.465 ipTM=0.196 tol=9.8 2024-05-07 02:58:53,932 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=48.4 pTM=0.46 ipTM=0.189 tol=7.51 2024-05-07 02:59:27,350 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=48.2 pTM=0.461 ipTM=0.192 tol=7.26 2024-05-07 02:59:27,351 alphafold2_multimer_v3_model_4_seed_000 took 1037.4s (30 recycles) 2024-05-07 03:00:01,583 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=47.2 pTM=0.45 ipTM=0.173 2024-05-07 03:00:34,975 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=48.1 pTM=0.453 ipTM=0.177 tol=16.7 2024-05-07 03:01:08,369 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=48.3 pTM=0.455 ipTM=0.179 tol=14.7 2024-05-07 03:01:41,782 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=48.2 pTM=0.458 ipTM=0.201 tol=6.52 2024-05-07 03:02:15,211 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=48.4 pTM=0.456 ipTM=0.183 tol=8.34 2024-05-07 03:02:48,648 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=48.4 pTM=0.458 ipTM=0.18 tol=5.8 2024-05-07 03:03:22,151 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=48.5 pTM=0.456 ipTM=0.182 tol=15 2024-05-07 03:03:55,614 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=48.6 pTM=0.457 ipTM=0.172 tol=7.79 2024-05-07 03:04:29,061 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=48.7 pTM=0.455 ipTM=0.172 tol=9.04 2024-05-07 03:05:02,537 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=48.5 pTM=0.46 ipTM=0.218 tol=14.3 2024-05-07 03:05:36,008 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=48.5 pTM=0.458 ipTM=0.191 tol=8.97 2024-05-07 03:06:09,488 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=48.6 pTM=0.457 ipTM=0.182 tol=15.1 2024-05-07 03:06:42,940 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=48.5 pTM=0.455 ipTM=0.177 tol=5.8 2024-05-07 03:07:16,363 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=48.5 pTM=0.459 ipTM=0.218 tol=16.6 2024-05-07 03:07:49,809 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=48.6 pTM=0.458 ipTM=0.184 tol=7.98 2024-05-07 03:08:23,269 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=48.6 pTM=0.458 ipTM=0.182 tol=16.9 2024-05-07 03:08:56,702 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=48.6 pTM=0.457 ipTM=0.187 tol=8.2 2024-05-07 03:09:30,163 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=48.5 pTM=0.463 ipTM=0.267 tol=18.5 2024-05-07 03:10:03,611 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=48.4 pTM=0.459 ipTM=0.201 tol=5.7 2024-05-07 03:10:37,084 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=48.3 pTM=0.458 ipTM=0.189 tol=8.44 2024-05-07 03:11:10,565 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=48.5 pTM=0.455 ipTM=0.181 tol=4.85 2024-05-07 03:11:44,020 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=48.3 pTM=0.46 ipTM=0.271 tol=6.67 2024-05-07 03:12:17,487 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=48.4 pTM=0.454 ipTM=0.18 tol=14.4 2024-05-07 03:12:50,886 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=48.4 pTM=0.459 ipTM=0.215 tol=15.3 2024-05-07 03:13:24,334 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=48.6 pTM=0.455 ipTM=0.179 tol=10.3 2024-05-07 03:13:57,770 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=48.7 pTM=0.455 ipTM=0.177 tol=11.6 2024-05-07 03:14:31,214 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=48.8 pTM=0.472 ipTM=0.475 tol=11.9 2024-05-07 03:15:04,617 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=48.3 pTM=0.461 ipTM=0.225 tol=7.51 2024-05-07 03:15:38,064 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=48.4 pTM=0.459 ipTM=0.178 tol=7.06 2024-05-07 03:16:11,477 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=48.6 pTM=0.47 ipTM=0.417 tol=10.1 2024-05-07 03:16:44,903 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=48.3 pTM=0.46 ipTM=0.2 tol=6.73 2024-05-07 03:16:44,904 alphafold2_multimer_v3_model_5_seed_000 took 1036.7s (30 recycles) 2024-05-07 03:16:45,752 reranking models by 'multimer' metric 2024-05-07 03:16:47,125 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-05-07 03:19:20,418 Relaxation took 154.7s 2024-05-07 03:19:20,418 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=47.9 pTM=0.453 ipTM=0.255 2024-05-07 03:21:49,425 Relaxation took 149.0s 2024-05-07 03:21:49,425 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=48.8 pTM=0.466 ipTM=0.2 2024-05-07 03:23:35,655 Relaxation took 106.2s 2024-05-07 03:23:35,655 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=48.3 pTM=0.46 ipTM=0.2 2024-05-07 03:25:50,660 Relaxation took 135.0s 2024-05-07 03:25:50,660 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=48.2 pTM=0.461 ipTM=0.192 2024-05-07 03:28:04,845 Relaxation took 134.2s 2024-05-07 03:28:04,845 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=48.7 pTM=0.453 ipTM=0.169 2024-05-07 03:28:07,120 Done