2024-05-07 07:01:56,625 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-05-07 07:01:56,951 Running on GPU
2024-05-07 07:02:00,410 Found 6 citations for tools or databases
2024-05-07 07:02:00,410 Query 1/1: SOX12_AMBRA1 (length 1613)
2024-05-07 07:02:18,613 Setting max_seq=508, max_extra_seq=2048
2024-05-07 07:06:37,183 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=36.5 pTM=0.39 ipTM=0.192
2024-05-07 07:07:57,712 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=36.6 pTM=0.391 ipTM=0.204 tol=20.6
2024-05-07 07:09:18,360 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=37.5 pTM=0.393 ipTM=0.199 tol=16.3
2024-05-07 07:10:39,011 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=37.9 pTM=0.396 ipTM=0.208 tol=8.02
2024-05-07 07:11:59,674 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=38.2 pTM=0.396 ipTM=0.214 tol=5.34
2024-05-07 07:13:20,370 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=38.1 pTM=0.396 ipTM=0.214 tol=7.52
2024-05-07 07:14:41,099 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=38.3 pTM=0.398 ipTM=0.216 tol=3.79
2024-05-07 07:16:01,810 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=38.3 pTM=0.401 ipTM=0.219 tol=7.26
2024-05-07 07:17:22,585 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=38.5 pTM=0.402 ipTM=0.223 tol=2.82
2024-05-07 07:18:43,346 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=38.6 pTM=0.404 ipTM=0.227 tol=4.04
2024-05-07 07:20:04,096 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=39 pTM=0.41 ipTM=0.361 tol=6.61
2024-05-07 07:21:24,857 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=39.2 pTM=0.41 ipTM=0.391 tol=6.55
2024-05-07 07:22:45,631 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=39.3 pTM=0.409 ipTM=0.392 tol=3.79
2024-05-07 07:24:06,349 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=39.4 pTM=0.411 ipTM=0.381 tol=3.84
2024-05-07 07:25:27,095 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=39.6 pTM=0.412 ipTM=0.382 tol=5.77
2024-05-07 07:26:47,827 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=39.5 pTM=0.412 ipTM=0.378 tol=6.11
2024-05-07 07:28:08,590 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=39.3 pTM=0.411 ipTM=0.362 tol=2.8
2024-05-07 07:29:29,398 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=39.3 pTM=0.411 ipTM=0.366 tol=3.09
2024-05-07 07:30:50,212 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=39.5 pTM=0.411 ipTM=0.379 tol=7.98
2024-05-07 07:32:10,984 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=39.4 pTM=0.411 ipTM=0.382 tol=6.72
2024-05-07 07:33:31,706 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=39.4 pTM=0.41 ipTM=0.372 tol=7.46
2024-05-07 07:34:52,464 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=39.5 pTM=0.411 ipTM=0.376 tol=7.01
2024-05-07 07:36:13,236 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=39.4 pTM=0.411 ipTM=0.38 tol=7.23
2024-05-07 07:37:34,009 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=39.4 pTM=0.413 ipTM=0.377 tol=6.67
2024-05-07 07:38:54,784 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=39.4 pTM=0.412 ipTM=0.379 tol=6.25
2024-05-07 07:40:15,523 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=39.5 pTM=0.412 ipTM=0.386 tol=4.96
2024-05-07 07:41:36,248 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=39.4 pTM=0.41 ipTM=0.375 tol=3.27
2024-05-07 07:42:57,007 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=39.5 pTM=0.411 ipTM=0.372 tol=6.57
2024-05-07 07:44:17,739 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=39.3 pTM=0.41 ipTM=0.372 tol=6.1
2024-05-07 07:45:38,470 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=39.6 pTM=0.414 ipTM=0.375 tol=3.04
2024-05-07 07:46:59,247 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=39.6 pTM=0.411 ipTM=0.367 tol=7.41
2024-05-07 07:46:59,249 alphafold2_multimer_v3_model_1_seed_000 took 2675.2s (30 recycles)
2024-05-07 07:48:21,605 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=36.8 pTM=0.407 ipTM=0.213
2024-05-07 07:49:42,534 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=38.1 pTM=0.408 ipTM=0.224 tol=16.8
2024-05-07 07:51:03,519 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=38.2 pTM=0.398 ipTM=0.207 tol=11.3
2024-05-07 07:52:24,476 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=38.4 pTM=0.399 ipTM=0.208 tol=10.7
2024-05-07 07:53:45,484 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=38.8 pTM=0.4 ipTM=0.215 tol=12.2
2024-05-07 07:55:06,435 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=38.8 pTM=0.397 ipTM=0.212 tol=7.82
2024-05-07 07:56:27,403 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=39.1 pTM=0.398 ipTM=0.214 tol=8.55
2024-05-07 07:57:48,368 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=39.2 pTM=0.403 ipTM=0.315 tol=10.8
2024-05-07 07:59:09,338 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=39.3 pTM=0.403 ipTM=0.323 tol=7.89
2024-05-07 08:00:30,327 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=39.3 pTM=0.403 ipTM=0.312 tol=6.33
2024-05-07 08:01:51,297 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=39.2 pTM=0.403 ipTM=0.321 tol=6.45
2024-05-07 08:03:12,260 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=39.2 pTM=0.405 ipTM=0.322 tol=6.27
2024-05-07 08:04:33,263 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=39.2 pTM=0.403 ipTM=0.341 tol=7.43
2024-05-07 08:05:54,242 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=39.2 pTM=0.403 ipTM=0.32 tol=4.25
2024-05-07 08:07:15,213 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=39.4 pTM=0.406 ipTM=0.339 tol=4.91
2024-05-07 08:08:36,438 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=39.4 pTM=0.405 ipTM=0.345 tol=3.68
2024-05-07 08:09:57,408 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=39.3 pTM=0.404 ipTM=0.329 tol=3.87
2024-05-07 08:11:18,410 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=39.4 pTM=0.404 ipTM=0.355 tol=3.92
2024-05-07 08:12:39,381 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=39.4 pTM=0.405 ipTM=0.375 tol=5.01
2024-05-07 08:14:00,313 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=39.5 pTM=0.406 ipTM=0.39 tol=3.9
2024-05-07 08:15:21,271 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=39.5 pTM=0.405 ipTM=0.385 tol=3.82
2024-05-07 08:16:42,255 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=39.4 pTM=0.404 ipTM=0.385 tol=3.4
2024-05-07 08:18:03,248 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=39.5 pTM=0.404 ipTM=0.387 tol=3.92
2024-05-07 08:19:24,171 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=39.5 pTM=0.405 ipTM=0.39 tol=3.97
2024-05-07 08:20:45,131 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=39.4 pTM=0.405 ipTM=0.387 tol=4.16
2024-05-07 08:22:06,068 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=39.5 pTM=0.405 ipTM=0.393 tol=2.88
2024-05-07 08:23:27,046 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=39.5 pTM=0.405 ipTM=0.385 tol=3.37
2024-05-07 08:24:47,996 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=39.6 pTM=0.405 ipTM=0.393 tol=4.02
2024-05-07 08:26:08,957 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=39.4 pTM=0.405 ipTM=0.385 tol=4.53
2024-05-07 08:27:29,891 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=39.8 pTM=0.41 ipTM=0.397 tol=3.76
2024-05-07 08:28:50,832 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=39.7 pTM=0.41 ipTM=0.388 tol=3.36
2024-05-07 08:28:50,834 alphafold2_multimer_v3_model_2_seed_000 took 2510.0s (30 recycles)
2024-05-07 08:30:13,678 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=37 pTM=0.393 ipTM=0.205
2024-05-07 08:31:35,030 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=37.3 pTM=0.392 ipTM=0.211 tol=21.9
2024-05-07 08:32:56,352 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=38.2 pTM=0.401 ipTM=0.232 tol=13.6
2024-05-07 08:34:17,631 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=38.3 pTM=0.406 ipTM=0.268 tol=9.09
2024-05-07 08:35:38,930 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=39.2 pTM=0.411 ipTM=0.365 tol=8.46
2024-05-07 08:37:00,192 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=39.4 pTM=0.411 ipTM=0.405 tol=8.91
2024-05-07 08:38:21,362 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=39.8 pTM=0.416 ipTM=0.41 tol=6.14
2024-05-07 08:39:42,533 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=39.4 pTM=0.414 ipTM=0.398 tol=6.89
2024-05-07 08:41:03,682 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=39.4 pTM=0.414 ipTM=0.39 tol=4.31
2024-05-07 08:42:24,849 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=39.7 pTM=0.415 ipTM=0.386 tol=3.88
2024-05-07 08:43:46,057 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=39.6 pTM=0.414 ipTM=0.389 tol=4.84
2024-05-07 08:45:07,251 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=39.7 pTM=0.417 ipTM=0.392 tol=4.81
2024-05-07 08:46:28,446 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=39.7 pTM=0.415 ipTM=0.394 tol=5.16
2024-05-07 08:47:49,714 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=39.8 pTM=0.416 ipTM=0.386 tol=9.05
2024-05-07 08:49:10,981 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=39.8 pTM=0.419 ipTM=0.398 tol=6.54
2024-05-07 08:50:32,262 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=39.8 pTM=0.418 ipTM=0.393 tol=4.08
2024-05-07 08:51:53,506 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=39.9 pTM=0.417 ipTM=0.383 tol=3.78
2024-05-07 08:53:14,762 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=40 pTM=0.421 ipTM=0.396 tol=3.53
2024-05-07 08:54:36,028 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=39.9 pTM=0.418 ipTM=0.391 tol=2.85
2024-05-07 08:55:57,291 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=40.2 pTM=0.421 ipTM=0.406 tol=2.83
2024-05-07 08:57:18,565 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=39.8 pTM=0.418 ipTM=0.394 tol=2.7
2024-05-07 08:58:39,827 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=39.9 pTM=0.418 ipTM=0.393 tol=2.92
2024-05-07 09:00:01,055 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=40 pTM=0.418 ipTM=0.399 tol=2.65
2024-05-07 09:01:22,318 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=40 pTM=0.421 ipTM=0.397 tol=2.53
2024-05-07 09:02:43,535 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=39.9 pTM=0.417 ipTM=0.396 tol=2.14
2024-05-07 09:04:04,725 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=40 pTM=0.418 ipTM=0.388 tol=2.49
2024-05-07 09:05:25,904 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=39.9 pTM=0.416 ipTM=0.378 tol=2.58
2024-05-07 09:06:47,088 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=39.9 pTM=0.418 ipTM=0.384 tol=2.43
2024-05-07 09:08:08,259 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=39.8 pTM=0.418 ipTM=0.39 tol=2.42
2024-05-07 09:09:29,414 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=40.2 pTM=0.421 ipTM=0.39 tol=4.33
2024-05-07 09:10:50,585 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=40.2 pTM=0.42 ipTM=0.393 tol=3.07
2024-05-07 09:10:50,587 alphafold2_multimer_v3_model_3_seed_000 took 2518.2s (30 recycles)
2024-05-07 09:12:13,221 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=36.4 pTM=0.393 ipTM=0.204
2024-05-07 09:13:34,333 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=37.6 pTM=0.416 ipTM=0.247 tol=20.2
2024-05-07 09:14:55,420 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=38.2 pTM=0.423 ipTM=0.279 tol=13.3
2024-05-07 09:16:16,535 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=37.8 pTM=0.414 ipTM=0.243 tol=11
2024-05-07 09:17:37,712 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=37.8 pTM=0.407 ipTM=0.24 tol=9.73
2024-05-07 09:18:58,889 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=38 pTM=0.407 ipTM=0.235 tol=6.43
2024-05-07 09:20:20,067 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=38 pTM=0.404 ipTM=0.236 tol=9.28
2024-05-07 09:21:41,284 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=37.8 pTM=0.404 ipTM=0.241 tol=11.1
2024-05-07 09:23:02,531 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=37.9 pTM=0.403 ipTM=0.231 tol=7.74
2024-05-07 09:24:23,798 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=38 pTM=0.405 ipTM=0.241 tol=7.62
2024-05-07 09:25:45,044 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=38 pTM=0.404 ipTM=0.241 tol=6.43
2024-05-07 09:27:06,308 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=37.8 pTM=0.403 ipTM=0.239 tol=7.05
2024-05-07 09:28:27,587 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=37.8 pTM=0.402 ipTM=0.235 tol=6.46
2024-05-07 09:29:48,884 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=38 pTM=0.403 ipTM=0.243 tol=6.11
2024-05-07 09:31:10,182 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=38.1 pTM=0.403 ipTM=0.246 tol=6.57
2024-05-07 09:32:31,457 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=37.9 pTM=0.403 ipTM=0.245 tol=8.85
2024-05-07 09:33:52,682 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=38 pTM=0.403 ipTM=0.246 tol=4.39
2024-05-07 09:35:13,944 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=38 pTM=0.403 ipTM=0.243 tol=5.69
2024-05-07 09:36:35,224 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=37.9 pTM=0.403 ipTM=0.234 tol=7.02
2024-05-07 09:37:56,472 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=37.8 pTM=0.402 ipTM=0.238 tol=4.86
2024-05-07 09:39:17,657 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=37.9 pTM=0.403 ipTM=0.248 tol=3.48
2024-05-07 09:40:38,807 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=37.8 pTM=0.403 ipTM=0.237 tol=3.28
2024-05-07 09:41:59,994 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=37.9 pTM=0.403 ipTM=0.24 tol=6.44
2024-05-07 09:43:21,192 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=38 pTM=0.405 ipTM=0.235 tol=7.8
2024-05-07 09:44:42,419 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=37.9 pTM=0.401 ipTM=0.236 tol=5.15
2024-05-07 09:46:03,616 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=38 pTM=0.402 ipTM=0.238 tol=8.11
2024-05-07 09:47:24,858 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=37.8 pTM=0.4 ipTM=0.239 tol=8.01
2024-05-07 09:48:46,114 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=38 pTM=0.401 ipTM=0.237 tol=7.76
2024-05-07 09:50:07,409 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=37.8 pTM=0.4 ipTM=0.237 tol=6.64
2024-05-07 09:51:28,694 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=38 pTM=0.403 ipTM=0.237 tol=4.24
2024-05-07 09:52:49,940 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=38 pTM=0.402 ipTM=0.237 tol=3.97
2024-05-07 09:52:49,942 alphafold2_multimer_v3_model_4_seed_000 took 2517.8s (30 recycles)
2024-05-07 09:54:12,714 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=36.9 pTM=0.387 ipTM=0.212
2024-05-07 09:55:34,035 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=38.3 pTM=0.395 ipTM=0.198 tol=19.5
2024-05-07 09:56:55,360 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=39.4 pTM=0.404 ipTM=0.203 tol=13.4
2024-05-07 09:58:16,695 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=39.6 pTM=0.397 ipTM=0.195 tol=11.4
2024-05-07 09:59:38,065 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=39.6 pTM=0.395 ipTM=0.191 tol=8.12
2024-05-07 10:00:59,442 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=40 pTM=0.4 ipTM=0.197 tol=5.58
2024-05-07 10:02:20,787 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=39.9 pTM=0.401 ipTM=0.2 tol=5.72
2024-05-07 10:03:42,121 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=39.7 pTM=0.402 ipTM=0.266 tol=9.84
2024-05-07 10:05:03,419 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=40.3 pTM=0.409 ipTM=0.335 tol=10
2024-05-07 10:06:24,676 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=40.1 pTM=0.404 ipTM=0.343 tol=5.67
2024-05-07 10:07:45,967 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=40.1 pTM=0.405 ipTM=0.345 tol=7.04
2024-05-07 10:09:07,257 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=40.2 pTM=0.405 ipTM=0.336 tol=5.92
2024-05-07 10:10:28,504 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=40.2 pTM=0.406 ipTM=0.354 tol=7.55
2024-05-07 10:11:49,811 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=40.4 pTM=0.405 ipTM=0.36 tol=7.33
2024-05-07 10:13:11,123 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=40.3 pTM=0.405 ipTM=0.363 tol=9.81
2024-05-07 10:14:32,467 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=40.3 pTM=0.408 ipTM=0.355 tol=5.55
2024-05-07 10:15:53,764 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=40.7 pTM=0.41 ipTM=0.354 tol=5.43
2024-05-07 10:17:15,112 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=40.4 pTM=0.408 ipTM=0.355 tol=6.15
2024-05-07 10:18:36,497 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=40.5 pTM=0.408 ipTM=0.351 tol=7.24
2024-05-07 10:19:57,820 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=40.2 pTM=0.409 ipTM=0.359 tol=7.97
2024-05-07 10:21:19,108 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=40.1 pTM=0.411 ipTM=0.362 tol=6.44
2024-05-07 10:22:40,437 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=40.1 pTM=0.409 ipTM=0.359 tol=7.56
2024-05-07 10:24:01,811 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=40.2 pTM=0.408 ipTM=0.364 tol=9.02
2024-05-07 10:25:23,107 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=40.4 pTM=0.413 ipTM=0.365 tol=6.02
2024-05-07 10:26:44,381 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=39.9 pTM=0.409 ipTM=0.362 tol=7.32
2024-05-07 10:28:05,673 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=40.6 pTM=0.417 ipTM=0.365 tol=10.1
2024-05-07 10:29:26,993 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=40.1 pTM=0.408 ipTM=0.366 tol=7.65
2024-05-07 10:30:48,331 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=40.3 pTM=0.409 ipTM=0.376 tol=6.14
2024-05-07 10:32:09,697 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=40.2 pTM=0.407 ipTM=0.381 tol=7.16
2024-05-07 10:33:30,958 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=40.6 pTM=0.411 ipTM=0.39 tol=3.6
2024-05-07 10:34:52,115 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=40.7 pTM=0.411 ipTM=0.391 tol=4.54
2024-05-07 10:34:52,117 alphafold2_multimer_v3_model_5_seed_000 took 2520.7s (30 recycles)
2024-05-07 10:34:53,652 reranking models by 'multimer' metric
2024-05-07 10:35:10,434 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-05-07 10:39:06,944 Relaxation took 253.3s
2024-05-07 10:39:06,960 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=40.2 pTM=0.42 ipTM=0.393
2024-05-07 10:43:02,291 Relaxation took 235.3s
2024-05-07 10:43:02,291 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=40.7 pTM=0.411 ipTM=0.391
2024-05-07 10:46:59,390 Relaxation took 237.1s
2024-05-07 10:46:59,398 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=39.7 pTM=0.41 ipTM=0.388
2024-05-07 11:14:12,874 Relaxation took 1633.5s
2024-05-07 11:14:12,875 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=39.6 pTM=0.411 ipTM=0.367
2024-05-07 11:18:44,227 Relaxation took 271.3s
2024-05-07 11:18:44,227 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=38 pTM=0.402 ipTM=0.237
2024-05-07 11:18:54,279 Done