2024-05-07 10:04:30,336 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-05-07 10:04:31,132 Running on GPU 2024-05-07 10:04:35,276 Found 6 citations for tools or databases 2024-05-07 10:04:35,276 Query 1/1: TULP1_FBXW7 (length 1196) 2024-05-07 10:04:52,812 Setting max_seq=508, max_extra_seq=2048 2024-05-07 10:08:13,397 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=59.5 pTM=0.434 ipTM=0.195 2024-05-07 10:08:50,839 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=60.7 pTM=0.455 ipTM=0.204 tol=14.1 2024-05-07 10:09:28,411 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=59.6 pTM=0.45 ipTM=0.194 tol=10.3 2024-05-07 10:10:06,012 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=59.9 pTM=0.452 ipTM=0.199 tol=8.12 2024-05-07 10:10:43,595 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=59.7 pTM=0.453 ipTM=0.198 tol=4.83 2024-05-07 10:11:21,208 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=59.9 pTM=0.454 ipTM=0.205 tol=7.06 2024-05-07 10:11:58,825 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=59.6 pTM=0.452 ipTM=0.199 tol=8.82 2024-05-07 10:12:36,428 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=59.9 pTM=0.457 ipTM=0.224 tol=7.54 2024-05-07 10:13:14,055 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=59.9 pTM=0.453 ipTM=0.199 tol=4.82 2024-05-07 10:13:51,661 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=60.2 pTM=0.459 ipTM=0.244 tol=3.18 2024-05-07 10:14:29,287 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=60.1 pTM=0.457 ipTM=0.247 tol=4.2 2024-05-07 10:15:06,939 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=60.1 pTM=0.456 ipTM=0.212 tol=3.61 2024-05-07 10:15:44,577 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=59.7 pTM=0.452 ipTM=0.197 tol=4.7 2024-05-07 10:16:22,230 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=59.9 pTM=0.455 ipTM=0.206 tol=8.3 2024-05-07 10:16:59,872 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=60 pTM=0.459 ipTM=0.245 tol=7.52 2024-05-07 10:17:37,512 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=60.1 pTM=0.457 ipTM=0.217 tol=7.79 2024-05-07 10:18:15,126 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=60.1 pTM=0.458 ipTM=0.237 tol=6.09 2024-05-07 10:18:52,772 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=60.4 pTM=0.46 ipTM=0.219 tol=3.92 2024-05-07 10:19:30,392 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=60.3 pTM=0.462 ipTM=0.281 tol=5.09 2024-05-07 10:20:08,026 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=60.4 pTM=0.466 ipTM=0.293 tol=4.55 2024-05-07 10:20:45,624 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=60.2 pTM=0.462 ipTM=0.286 tol=2.53 2024-05-07 10:21:23,278 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=60.3 pTM=0.465 ipTM=0.263 tol=3.58 2024-05-07 10:22:00,912 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=60.3 pTM=0.462 ipTM=0.223 tol=3.83 2024-05-07 10:22:38,557 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=60.4 pTM=0.466 ipTM=0.284 tol=3.87 2024-05-07 10:23:16,232 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=60.2 pTM=0.461 ipTM=0.247 tol=4.74 2024-05-07 10:23:53,910 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=60.2 pTM=0.461 ipTM=0.218 tol=3.44 2024-05-07 10:24:31,573 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=60.4 pTM=0.46 ipTM=0.226 tol=5.22 2024-05-07 10:25:09,206 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=60.4 pTM=0.466 ipTM=0.261 tol=5.26 2024-05-07 10:25:46,829 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=60.3 pTM=0.46 ipTM=0.248 tol=4.58 2024-05-07 10:26:24,476 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=60.5 pTM=0.465 ipTM=0.246 tol=4.36 2024-05-07 10:27:02,130 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=60.3 pTM=0.46 ipTM=0.217 tol=5.16 2024-05-07 10:27:02,131 alphafold2_multimer_v3_model_1_seed_000 took 1322.3s (30 recycles) 2024-05-07 10:27:40,941 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=60.3 pTM=0.45 ipTM=0.213 2024-05-07 10:28:18,698 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=61 pTM=0.458 ipTM=0.365 tol=14.9 2024-05-07 10:28:56,488 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=60.8 pTM=0.456 ipTM=0.243 tol=8.48 2024-05-07 10:29:34,263 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=61 pTM=0.455 ipTM=0.201 tol=8.72 2024-05-07 10:30:12,030 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=61.1 pTM=0.455 ipTM=0.2 tol=8.69 2024-05-07 10:30:49,791 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=61.3 pTM=0.455 ipTM=0.25 tol=9.41 2024-05-07 10:31:27,563 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=61.2 pTM=0.455 ipTM=0.235 tol=4.81 2024-05-07 10:32:05,329 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=61.2 pTM=0.454 ipTM=0.221 tol=5.12 2024-05-07 10:32:43,112 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=61.4 pTM=0.456 ipTM=0.318 tol=3.61 2024-05-07 10:33:20,878 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=61.4 pTM=0.456 ipTM=0.245 tol=4.24 2024-05-07 10:33:58,626 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=61.2 pTM=0.456 ipTM=0.245 tol=2.88 2024-05-07 10:34:36,361 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=61.6 pTM=0.454 ipTM=0.337 tol=2.49 2024-05-07 10:35:14,124 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=61.5 pTM=0.455 ipTM=0.244 tol=2.43 2024-05-07 10:35:51,889 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=61.4 pTM=0.456 ipTM=0.236 tol=2.25 2024-05-07 10:36:29,695 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=61.3 pTM=0.453 ipTM=0.209 tol=2.09 2024-05-07 10:37:07,489 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=61.2 pTM=0.452 ipTM=0.236 tol=2.35 2024-05-07 10:37:45,290 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=61.4 pTM=0.453 ipTM=0.207 tol=2.18 2024-05-07 10:38:23,100 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=61.4 pTM=0.452 ipTM=0.203 tol=3.38 2024-05-07 10:39:00,926 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=61.4 pTM=0.452 ipTM=0.277 tol=3.62 2024-05-07 10:39:38,732 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=61.3 pTM=0.452 ipTM=0.2 tol=5.8 2024-05-07 10:40:16,551 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=61.4 pTM=0.452 ipTM=0.203 tol=4.46 2024-05-07 10:40:54,341 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=61.4 pTM=0.453 ipTM=0.25 tol=4.28 2024-05-07 10:41:32,158 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=61.4 pTM=0.452 ipTM=0.222 tol=5.32 2024-05-07 10:42:09,953 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=61.5 pTM=0.452 ipTM=0.244 tol=4.31 2024-05-07 10:42:47,764 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=61.3 pTM=0.452 ipTM=0.225 tol=3.2 2024-05-07 10:43:25,550 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=61.3 pTM=0.453 ipTM=0.219 tol=3.97 2024-05-07 10:44:03,353 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=61.5 pTM=0.452 ipTM=0.246 tol=3.87 2024-05-07 10:44:41,123 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=61.2 pTM=0.454 ipTM=0.205 tol=3.68 2024-05-07 10:45:18,901 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=61.3 pTM=0.45 ipTM=0.217 tol=3.29 2024-05-07 10:45:56,692 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=61.6 pTM=0.454 ipTM=0.232 tol=2.68 2024-05-07 10:46:34,467 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=61.5 pTM=0.451 ipTM=0.217 tol=4.75 2024-05-07 10:46:34,469 alphafold2_multimer_v3_model_2_seed_000 took 1171.2s (30 recycles) 2024-05-07 10:47:13,430 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=60.6 pTM=0.439 ipTM=0.19 2024-05-07 10:47:51,315 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=60.8 pTM=0.462 ipTM=0.212 tol=30.4 2024-05-07 10:48:29,183 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=61.1 pTM=0.463 ipTM=0.215 tol=12.8 2024-05-07 10:49:07,003 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=61 pTM=0.473 ipTM=0.219 tol=8.17 2024-05-07 10:49:44,864 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=61.2 pTM=0.472 ipTM=0.214 tol=6.55 2024-05-07 10:50:22,768 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=61.2 pTM=0.471 ipTM=0.215 tol=6.23 2024-05-07 10:51:00,626 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=60.8 pTM=0.47 ipTM=0.216 tol=3.36 2024-05-07 10:51:38,511 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=60.8 pTM=0.47 ipTM=0.215 tol=2.41 2024-05-07 10:52:16,366 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=61 pTM=0.473 ipTM=0.223 tol=3.49 2024-05-07 10:52:54,233 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=60.8 pTM=0.471 ipTM=0.215 tol=4.27 2024-05-07 10:53:32,099 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=60.7 pTM=0.474 ipTM=0.223 tol=3.85 2024-05-07 10:54:09,974 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=60.9 pTM=0.477 ipTM=0.265 tol=3.38 2024-05-07 10:54:47,874 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=60.9 pTM=0.473 ipTM=0.22 tol=5.98 2024-05-07 10:55:25,763 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=60.6 pTM=0.472 ipTM=0.218 tol=5.04 2024-05-07 10:56:03,678 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=60.6 pTM=0.473 ipTM=0.222 tol=2.45 2024-05-07 10:56:41,592 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=60.5 pTM=0.468 ipTM=0.211 tol=4.32 2024-05-07 10:57:19,527 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=60.7 pTM=0.473 ipTM=0.22 tol=3.57 2024-05-07 10:57:57,412 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=60.5 pTM=0.471 ipTM=0.215 tol=3.94 2024-05-07 10:58:35,353 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=60.8 pTM=0.473 ipTM=0.218 tol=3.65 2024-05-07 10:59:13,241 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=60.6 pTM=0.47 ipTM=0.214 tol=5.66 2024-05-07 10:59:51,173 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=60.8 pTM=0.47 ipTM=0.215 tol=2.93 2024-05-07 11:00:29,056 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=60.6 pTM=0.471 ipTM=0.215 tol=2.21 2024-05-07 11:01:06,944 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=60.6 pTM=0.471 ipTM=0.216 tol=4.56 2024-05-07 11:01:44,842 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=60.7 pTM=0.472 ipTM=0.213 tol=4.32 2024-05-07 11:02:22,743 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=60.7 pTM=0.474 ipTM=0.219 tol=4.88 2024-05-07 11:03:00,619 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=60.4 pTM=0.472 ipTM=0.215 tol=4.55 2024-05-07 11:03:38,538 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=60.6 pTM=0.471 ipTM=0.214 tol=4.34 2024-05-07 11:04:16,437 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=60.6 pTM=0.474 ipTM=0.225 tol=8.64 2024-05-07 11:04:54,312 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=60.7 pTM=0.471 ipTM=0.214 tol=3.71 2024-05-07 11:05:32,206 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=60.7 pTM=0.474 ipTM=0.22 tol=3.99 2024-05-07 11:06:10,090 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=60.6 pTM=0.472 ipTM=0.217 tol=3.1 2024-05-07 11:06:10,091 alphafold2_multimer_v3_model_3_seed_000 took 1174.5s (30 recycles) 2024-05-07 11:06:48,987 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=59.4 pTM=0.458 ipTM=0.299 2024-05-07 11:07:26,885 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=59.3 pTM=0.466 ipTM=0.223 tol=12.4 2024-05-07 11:08:04,842 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=59.7 pTM=0.468 ipTM=0.224 tol=14.2 2024-05-07 11:08:42,807 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=59.9 pTM=0.469 ipTM=0.308 tol=15.8 2024-05-07 11:09:20,807 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=60.2 pTM=0.473 ipTM=0.357 tol=11.6 2024-05-07 11:09:58,755 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=59.3 pTM=0.47 ipTM=0.224 tol=13.1 2024-05-07 11:10:36,782 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=59.6 pTM=0.469 ipTM=0.218 tol=9.7 2024-05-07 11:11:14,808 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=59.6 pTM=0.468 ipTM=0.251 tol=9.25 2024-05-07 11:11:52,866 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=59.7 pTM=0.467 ipTM=0.213 tol=9.15 2024-05-07 11:12:30,919 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=59.8 pTM=0.468 ipTM=0.214 tol=8.53 2024-05-07 11:13:08,976 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=59.6 pTM=0.47 ipTM=0.259 tol=12.3 2024-05-07 11:13:47,030 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=60.1 pTM=0.471 ipTM=0.329 tol=5.07 2024-05-07 11:14:25,116 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=59.9 pTM=0.467 ipTM=0.214 tol=7.05 2024-05-07 11:15:03,190 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=59.9 pTM=0.469 ipTM=0.214 tol=7.07 2024-05-07 11:15:41,314 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=59.9 pTM=0.467 ipTM=0.21 tol=15 2024-05-07 11:16:19,389 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=59.7 pTM=0.468 ipTM=0.216 tol=8.9 2024-05-07 11:16:57,497 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=60 pTM=0.467 ipTM=0.212 tol=4.6 2024-05-07 11:17:35,567 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=59.9 pTM=0.468 ipTM=0.212 tol=3.85 2024-05-07 11:18:13,653 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=60.1 pTM=0.47 ipTM=0.218 tol=3.67 2024-05-07 11:18:51,727 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=59.8 pTM=0.468 ipTM=0.212 tol=4.09 2024-05-07 11:19:29,839 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=59.8 pTM=0.47 ipTM=0.251 tol=10.4 2024-05-07 11:20:07,916 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=59.8 pTM=0.47 ipTM=0.215 tol=7.03 2024-05-07 11:20:46,060 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=59.9 pTM=0.467 ipTM=0.208 tol=5.48 2024-05-07 11:21:24,195 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=60.1 pTM=0.469 ipTM=0.212 tol=6.91 2024-05-07 11:22:02,287 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=59.7 pTM=0.468 ipTM=0.212 tol=12.2 2024-05-07 11:22:40,342 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=59.6 pTM=0.469 ipTM=0.211 tol=11.3 2024-05-07 11:23:18,400 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=59.9 pTM=0.467 ipTM=0.209 tol=7.64 2024-05-07 11:23:56,586 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=59.8 pTM=0.467 ipTM=0.213 tol=8.32 2024-05-07 11:24:35,009 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=59.8 pTM=0.468 ipTM=0.213 tol=6.13 2024-05-07 11:25:13,478 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=60.2 pTM=0.471 ipTM=0.222 tol=5.5 2024-05-07 11:25:51,798 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=59.8 pTM=0.469 ipTM=0.221 tol=14.3 2024-05-07 11:25:51,799 alphafold2_multimer_v3_model_4_seed_000 took 1180.6s (30 recycles) 2024-05-07 11:26:31,058 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=59.9 pTM=0.431 ipTM=0.199 2024-05-07 11:27:09,184 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=60.7 pTM=0.44 ipTM=0.269 tol=16.6 2024-05-07 11:27:47,293 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=60.7 pTM=0.458 ipTM=0.308 tol=28.9 2024-05-07 11:28:25,361 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=60.8 pTM=0.462 ipTM=0.2 tol=8.79 2024-05-07 11:29:03,414 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=60.9 pTM=0.466 ipTM=0.206 tol=9.01 2024-05-07 11:29:41,476 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=61.1 pTM=0.469 ipTM=0.216 tol=5.91 2024-05-07 11:30:19,550 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=61 pTM=0.465 ipTM=0.218 tol=6.25 2024-05-07 11:30:57,596 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=60.9 pTM=0.468 ipTM=0.218 tol=4.61 2024-05-07 11:31:35,667 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=61 pTM=0.468 ipTM=0.216 tol=5.52 2024-05-07 11:32:13,710 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=61 pTM=0.475 ipTM=0.231 tol=4.38 2024-05-07 11:32:51,779 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=61 pTM=0.469 ipTM=0.213 tol=6.42 2024-05-07 11:33:29,825 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=61.2 pTM=0.47 ipTM=0.218 tol=5.47 2024-05-07 11:34:07,878 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=61.2 pTM=0.469 ipTM=0.213 tol=5.09 2024-05-07 11:34:45,937 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=60.9 pTM=0.47 ipTM=0.218 tol=5.01 2024-05-07 11:35:23,987 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=61.1 pTM=0.467 ipTM=0.211 tol=4.9 2024-05-07 11:36:02,035 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=61 pTM=0.471 ipTM=0.226 tol=2.5 2024-05-07 11:36:40,108 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=60.9 pTM=0.468 ipTM=0.213 tol=2.53 2024-05-07 11:37:18,172 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=61.1 pTM=0.469 ipTM=0.216 tol=1.83 2024-05-07 11:37:56,226 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=61.2 pTM=0.467 ipTM=0.211 tol=2.56 2024-05-07 11:38:34,278 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=61.2 pTM=0.47 ipTM=0.219 tol=3.35 2024-05-07 11:39:12,301 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=61.8 pTM=0.478 ipTM=0.417 tol=3.27 2024-05-07 11:39:50,328 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=61.5 pTM=0.475 ipTM=0.331 tol=5.31 2024-05-07 11:40:28,371 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=61.3 pTM=0.476 ipTM=0.35 tol=2.24 2024-05-07 11:41:06,385 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=61.8 pTM=0.477 ipTM=0.369 tol=5 2024-05-07 11:41:44,402 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=61.6 pTM=0.479 ipTM=0.341 tol=4.76 2024-05-07 11:42:22,426 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=61.5 pTM=0.477 ipTM=0.348 tol=2.21 2024-05-07 11:43:00,448 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=61.6 pTM=0.477 ipTM=0.33 tol=1.92 2024-05-07 11:43:38,470 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=61.5 pTM=0.475 ipTM=0.327 tol=2.71 2024-05-07 11:44:16,499 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=61.6 pTM=0.478 ipTM=0.336 tol=3.44 2024-05-07 11:44:54,532 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=61.6 pTM=0.476 ipTM=0.333 tol=5.36 2024-05-07 11:45:32,576 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=61.6 pTM=0.475 ipTM=0.322 tol=4.89 2024-05-07 11:45:32,577 alphafold2_multimer_v3_model_5_seed_000 took 1179.7s (30 recycles) 2024-05-07 11:45:33,689 reranking models by 'multimer' metric 2024-05-07 11:45:51,183 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-05-07 11:48:32,644 Relaxation took 179.0s 2024-05-07 11:48:32,645 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=61.6 pTM=0.475 ipTM=0.322 2024-05-07 11:51:12,945 Relaxation took 160.3s 2024-05-07 11:51:12,945 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=59.8 pTM=0.469 ipTM=0.221 2024-05-07 11:54:49,713 Relaxation took 216.8s 2024-05-07 11:54:49,713 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=60.6 pTM=0.472 ipTM=0.217 2024-05-07 11:56:54,779 Relaxation took 125.1s 2024-05-07 11:56:54,779 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=60.3 pTM=0.46 ipTM=0.217 2024-05-07 12:00:33,741 Relaxation took 219.0s 2024-05-07 12:00:33,741 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=61.5 pTM=0.451 ipTM=0.217 2024-05-07 12:00:37,152 Done