2024-05-07 10:36:09,247 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-05-07 10:36:09,939 Running on GPU 2024-05-07 10:36:29,151 Found 6 citations for tools or databases 2024-05-07 10:36:29,152 Query 1/1: USP18_BTRC (length 977) 2024-05-07 10:36:36,056 Setting max_seq=508, max_extra_seq=2048 2024-05-07 10:40:33,376 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=72.4 pTM=0.471 ipTM=0.152 2024-05-07 10:40:53,919 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=72.9 pTM=0.478 ipTM=0.179 tol=14.8 2024-05-07 10:41:14,529 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=73.4 pTM=0.473 ipTM=0.171 tol=10.9 2024-05-07 10:41:35,214 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=73.7 pTM=0.473 ipTM=0.236 tol=4.59 2024-05-07 10:41:55,913 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=73.7 pTM=0.476 ipTM=0.253 tol=3.36 2024-05-07 10:42:16,671 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=73.7 pTM=0.474 ipTM=0.246 tol=5.03 2024-05-07 10:42:37,455 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=73.6 pTM=0.477 ipTM=0.25 tol=5.17 2024-05-07 10:42:58,269 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=73.9 pTM=0.478 ipTM=0.244 tol=3.16 2024-05-07 10:43:19,098 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=73.7 pTM=0.477 ipTM=0.242 tol=3.56 2024-05-07 10:43:39,948 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=73.8 pTM=0.474 ipTM=0.242 tol=4 2024-05-07 10:44:00,811 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=73.8 pTM=0.478 ipTM=0.247 tol=3.71 2024-05-07 10:44:21,671 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=73.6 pTM=0.473 ipTM=0.254 tol=3.61 2024-05-07 10:44:42,542 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=73.8 pTM=0.477 ipTM=0.255 tol=3.56 2024-05-07 10:45:03,434 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=73.6 pTM=0.473 ipTM=0.263 tol=3.4 2024-05-07 10:45:24,328 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=73.6 pTM=0.474 ipTM=0.262 tol=2.52 2024-05-07 10:45:45,231 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=73.6 pTM=0.473 ipTM=0.252 tol=3.62 2024-05-07 10:46:06,135 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=73.7 pTM=0.476 ipTM=0.247 tol=3.57 2024-05-07 10:46:27,046 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=73.6 pTM=0.473 ipTM=0.235 tol=3.58 2024-05-07 10:46:47,931 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=73.5 pTM=0.475 ipTM=0.25 tol=4.16 2024-05-07 10:47:08,816 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=73.5 pTM=0.471 ipTM=0.252 tol=3.7 2024-05-07 10:47:29,690 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=73.6 pTM=0.475 ipTM=0.247 tol=2.45 2024-05-07 10:47:50,560 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=73.6 pTM=0.473 ipTM=0.247 tol=2.01 2024-05-07 10:48:11,427 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=73.6 pTM=0.475 ipTM=0.252 tol=3.75 2024-05-07 10:48:32,300 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=73.5 pTM=0.469 ipTM=0.254 tol=1.29 2024-05-07 10:48:53,185 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=72.5 pTM=0.474 ipTM=0.267 tol=8.46 2024-05-07 10:49:14,070 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=73.8 pTM=0.476 ipTM=0.264 tol=5.74 2024-05-07 10:49:34,953 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=73.4 pTM=0.474 ipTM=0.271 tol=4.59 2024-05-07 10:49:55,831 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=73.6 pTM=0.472 ipTM=0.278 tol=4.62 2024-05-07 10:50:16,711 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=73.2 pTM=0.469 ipTM=0.253 tol=4.97 2024-05-07 10:50:37,608 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=73.6 pTM=0.472 ipTM=0.251 tol=1.92 2024-05-07 10:50:58,502 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=73.6 pTM=0.473 ipTM=0.257 tol=3.32 2024-05-07 10:50:58,503 alphafold2_multimer_v3_model_1_seed_000 took 809.7s (30 recycles) 2024-05-07 10:51:20,075 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=74.1 pTM=0.479 ipTM=0.143 2024-05-07 10:51:41,104 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=74.8 pTM=0.484 ipTM=0.148 tol=9.29 2024-05-07 10:52:02,098 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=75 pTM=0.477 ipTM=0.147 tol=7.46 2024-05-07 10:52:23,094 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=75.4 pTM=0.476 ipTM=0.142 tol=4.37 2024-05-07 10:52:44,058 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=75.3 pTM=0.477 ipTM=0.145 tol=5.52 2024-05-07 10:53:05,059 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=75.4 pTM=0.479 ipTM=0.145 tol=5.39 2024-05-07 10:53:26,032 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=75.4 pTM=0.478 ipTM=0.143 tol=2.21 2024-05-07 10:53:47,020 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=75.5 pTM=0.479 ipTM=0.146 tol=2.97 2024-05-07 10:54:07,995 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=75.4 pTM=0.479 ipTM=0.145 tol=3.88 2024-05-07 10:54:28,963 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=75.5 pTM=0.478 ipTM=0.143 tol=4.47 2024-05-07 10:54:49,935 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=75.5 pTM=0.48 ipTM=0.148 tol=2.47 2024-05-07 10:55:10,914 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=75.6 pTM=0.483 ipTM=0.155 tol=2.59 2024-05-07 10:55:31,895 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=75.6 pTM=0.48 ipTM=0.145 tol=2.31 2024-05-07 10:55:52,853 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=75.5 pTM=0.483 ipTM=0.152 tol=2.43 2024-05-07 10:56:13,842 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=75.5 pTM=0.483 ipTM=0.154 tol=1.8 2024-05-07 10:56:34,810 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=75.6 pTM=0.484 ipTM=0.157 tol=1.65 2024-05-07 10:56:55,769 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=75.4 pTM=0.48 ipTM=0.153 tol=1.45 2024-05-07 10:57:16,703 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=75.2 pTM=0.478 ipTM=0.152 tol=1.45 2024-05-07 10:57:37,661 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=75.5 pTM=0.48 ipTM=0.15 tol=1.74 2024-05-07 10:57:58,610 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=75.4 pTM=0.481 ipTM=0.153 tol=2.89 2024-05-07 10:58:19,553 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=75.6 pTM=0.48 ipTM=0.148 tol=2.55 2024-05-07 10:58:40,493 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=75.5 pTM=0.481 ipTM=0.156 tol=1.27 2024-05-07 10:59:01,442 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=75.6 pTM=0.483 ipTM=0.156 tol=1.19 2024-05-07 10:59:22,388 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=75.4 pTM=0.479 ipTM=0.161 tol=1.41 2024-05-07 10:59:43,317 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=75.6 pTM=0.482 ipTM=0.177 tol=1.19 2024-05-07 11:00:04,266 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=75.7 pTM=0.485 ipTM=0.19 tol=1.18 2024-05-07 11:00:25,194 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=75.8 pTM=0.484 ipTM=0.201 tol=1.98 2024-05-07 11:00:46,120 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=75.6 pTM=0.482 ipTM=0.21 tol=1.23 2024-05-07 11:01:07,061 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=75.6 pTM=0.483 ipTM=0.206 tol=1.79 2024-05-07 11:01:28,004 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=75.6 pTM=0.482 ipTM=0.213 tol=2.27 2024-05-07 11:01:48,950 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=75.7 pTM=0.481 ipTM=0.205 tol=2.31 2024-05-07 11:01:48,951 alphafold2_multimer_v3_model_2_seed_000 took 649.9s (30 recycles) 2024-05-07 11:02:10,560 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=73.9 pTM=0.503 ipTM=0.216 2024-05-07 11:02:31,596 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=73.9 pTM=0.49 ipTM=0.163 tol=9.2 2024-05-07 11:02:52,582 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=73.8 pTM=0.502 ipTM=0.198 tol=12.4 2024-05-07 11:03:13,601 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=74.1 pTM=0.489 ipTM=0.159 tol=3.58 2024-05-07 11:03:34,556 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=74.1 pTM=0.5 ipTM=0.191 tol=4.84 2024-05-07 11:03:55,554 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=74 pTM=0.495 ipTM=0.172 tol=4.46 2024-05-07 11:04:16,510 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=74.2 pTM=0.499 ipTM=0.184 tol=4.7 2024-05-07 11:04:37,494 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=74.3 pTM=0.495 ipTM=0.17 tol=5.17 2024-05-07 11:04:58,440 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=74.3 pTM=0.501 ipTM=0.191 tol=6.36 2024-05-07 11:05:19,418 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=74.4 pTM=0.498 ipTM=0.243 tol=3.07 2024-05-07 11:05:40,364 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=74.5 pTM=0.497 ipTM=0.227 tol=3.94 2024-05-07 11:06:01,332 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=74.4 pTM=0.493 ipTM=0.196 tol=2.81 2024-05-07 11:06:22,308 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=74.4 pTM=0.494 ipTM=0.18 tol=2.9 2024-05-07 11:06:43,282 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=74.4 pTM=0.502 ipTM=0.194 tol=2.98 2024-05-07 11:07:04,233 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=74.4 pTM=0.496 ipTM=0.19 tol=2.21 2024-05-07 11:07:25,197 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=74.3 pTM=0.501 ipTM=0.189 tol=2.46 2024-05-07 11:07:46,148 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=74.5 pTM=0.5 ipTM=0.19 tol=1.77 2024-05-07 11:08:07,088 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=74.3 pTM=0.503 ipTM=0.211 tol=1.82 2024-05-07 11:08:28,033 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=74.6 pTM=0.504 ipTM=0.245 tol=1.44 2024-05-07 11:08:48,978 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=74.4 pTM=0.502 ipTM=0.241 tol=1.55 2024-05-07 11:09:09,934 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=74.4 pTM=0.502 ipTM=0.192 tol=1.56 2024-05-07 11:09:30,932 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=74.5 pTM=0.497 ipTM=0.18 tol=1.91 2024-05-07 11:09:51,887 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=74.4 pTM=0.497 ipTM=0.175 tol=2.41 2024-05-07 11:10:12,869 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=74.4 pTM=0.495 ipTM=0.173 tol=2.44 2024-05-07 11:10:33,842 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=74.5 pTM=0.496 ipTM=0.175 tol=2.74 2024-05-07 11:10:54,847 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=74.4 pTM=0.497 ipTM=0.175 tol=2.85 2024-05-07 11:11:15,820 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=74.5 pTM=0.495 ipTM=0.173 tol=2.9 2024-05-07 11:11:36,812 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=74.4 pTM=0.497 ipTM=0.176 tol=2.37 2024-05-07 11:11:57,786 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=74.5 pTM=0.496 ipTM=0.201 tol=2.18 2024-05-07 11:12:18,757 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=74.4 pTM=0.502 ipTM=0.22 tol=2.65 2024-05-07 11:12:39,712 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=74.4 pTM=0.504 ipTM=0.225 tol=2.05 2024-05-07 11:12:39,713 alphafold2_multimer_v3_model_3_seed_000 took 650.2s (30 recycles) 2024-05-07 11:13:01,335 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=72.3 pTM=0.473 ipTM=0.15 2024-05-07 11:13:22,349 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=74.1 pTM=0.479 ipTM=0.142 tol=8.2 2024-05-07 11:13:43,371 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=74.6 pTM=0.477 ipTM=0.145 tol=9.25 2024-05-07 11:14:04,390 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=74.7 pTM=0.477 ipTM=0.198 tol=5.09 2024-05-07 11:14:25,392 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=74.8 pTM=0.479 ipTM=0.189 tol=2.46 2024-05-07 11:14:46,385 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=74.6 pTM=0.478 ipTM=0.192 tol=3.04 2024-05-07 11:15:07,356 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=74.9 pTM=0.48 ipTM=0.185 tol=1.98 2024-05-07 11:15:28,334 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=74.9 pTM=0.478 ipTM=0.181 tol=1.99 2024-05-07 11:15:49,306 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=74.9 pTM=0.479 ipTM=0.188 tol=5.24 2024-05-07 11:16:10,263 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=74.9 pTM=0.477 ipTM=0.196 tol=2.42 2024-05-07 11:16:31,218 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=74.6 pTM=0.476 ipTM=0.196 tol=3.64 2024-05-07 11:16:52,197 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=74.9 pTM=0.477 ipTM=0.193 tol=3.34 2024-05-07 11:17:13,178 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=74.9 pTM=0.479 ipTM=0.191 tol=4.06 2024-05-07 11:17:34,142 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=74.8 pTM=0.477 ipTM=0.189 tol=2.88 2024-05-07 11:17:55,112 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=74.7 pTM=0.476 ipTM=0.182 tol=1.7 2024-05-07 11:18:16,107 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=74.8 pTM=0.474 ipTM=0.181 tol=3.45 2024-05-07 11:18:37,106 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=74.8 pTM=0.475 ipTM=0.182 tol=1.87 2024-05-07 11:18:58,101 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=74.8 pTM=0.474 ipTM=0.183 tol=1.69 2024-05-07 11:19:19,079 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=74.9 pTM=0.476 ipTM=0.19 tol=2.98 2024-05-07 11:19:40,059 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=74.9 pTM=0.475 ipTM=0.187 tol=1.83 2024-05-07 11:20:01,040 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=75 pTM=0.477 ipTM=0.189 tol=2.44 2024-05-07 11:20:22,011 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=75 pTM=0.475 ipTM=0.186 tol=2.5 2024-05-07 11:20:42,973 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=74.9 pTM=0.476 ipTM=0.185 tol=1.44 2024-05-07 11:21:03,944 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=74.9 pTM=0.475 ipTM=0.19 tol=1.12 2024-05-07 11:21:24,919 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=74.9 pTM=0.476 ipTM=0.186 tol=1.29 2024-05-07 11:21:45,898 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=74.9 pTM=0.477 ipTM=0.199 tol=3.53 2024-05-07 11:22:06,882 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=75.1 pTM=0.477 ipTM=0.188 tol=2.24 2024-05-07 11:22:27,852 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=74.9 pTM=0.475 ipTM=0.191 tol=5.01 2024-05-07 11:22:48,829 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=74.9 pTM=0.475 ipTM=0.19 tol=2.02 2024-05-07 11:23:09,817 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=74.9 pTM=0.476 ipTM=0.186 tol=2.77 2024-05-07 11:23:30,791 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=74.8 pTM=0.476 ipTM=0.193 tol=3 2024-05-07 11:23:30,792 alphafold2_multimer_v3_model_4_seed_000 took 650.5s (30 recycles) 2024-05-07 11:23:52,369 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=72.1 pTM=0.491 ipTM=0.202 2024-05-07 11:24:13,389 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=73.6 pTM=0.495 ipTM=0.192 tol=10.4 2024-05-07 11:24:34,387 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=73.5 pTM=0.487 ipTM=0.161 tol=11 2024-05-07 11:24:55,384 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=73.7 pTM=0.488 ipTM=0.17 tol=4.31 2024-05-07 11:25:16,372 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=73.8 pTM=0.486 ipTM=0.155 tol=3.83 2024-05-07 11:25:37,369 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=73.9 pTM=0.493 ipTM=0.176 tol=2.71 2024-05-07 11:25:58,371 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=74 pTM=0.488 ipTM=0.164 tol=1.94 2024-05-07 11:26:19,365 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=73.9 pTM=0.492 ipTM=0.174 tol=2.59 2024-05-07 11:26:40,363 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=73.9 pTM=0.487 ipTM=0.158 tol=3.22 2024-05-07 11:27:01,366 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=73.9 pTM=0.491 ipTM=0.171 tol=2.34 2024-05-07 11:27:22,394 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=74.1 pTM=0.485 ipTM=0.152 tol=3.18 2024-05-07 11:27:43,392 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=73.8 pTM=0.489 ipTM=0.169 tol=3.05 2024-05-07 11:28:04,402 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=74.1 pTM=0.486 ipTM=0.151 tol=3.1 2024-05-07 11:28:25,380 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=73.9 pTM=0.489 ipTM=0.166 tol=3.55 2024-05-07 11:28:46,367 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=73.9 pTM=0.485 ipTM=0.153 tol=2.87 2024-05-07 11:29:07,374 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=73.9 pTM=0.489 ipTM=0.17 tol=1.99 2024-05-07 11:29:28,387 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=74 pTM=0.486 ipTM=0.154 tol=2.89 2024-05-07 11:29:49,391 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=73.9 pTM=0.489 ipTM=0.165 tol=2.67 2024-05-07 11:30:10,389 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=73.9 pTM=0.487 ipTM=0.156 tol=1.88 2024-05-07 11:30:31,368 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=73.9 pTM=0.488 ipTM=0.167 tol=2.76 2024-05-07 11:30:52,371 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=74.1 pTM=0.485 ipTM=0.152 tol=3.12 2024-05-07 11:31:13,356 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=74.1 pTM=0.488 ipTM=0.163 tol=2.94 2024-05-07 11:31:34,354 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=73.9 pTM=0.485 ipTM=0.154 tol=2.64 2024-05-07 11:31:55,369 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=73.9 pTM=0.49 ipTM=0.174 tol=3.48 2024-05-07 11:32:16,376 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=74.1 pTM=0.487 ipTM=0.156 tol=2.96 2024-05-07 11:32:37,396 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=74.1 pTM=0.488 ipTM=0.157 tol=2.38 2024-05-07 11:32:58,422 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=74 pTM=0.49 ipTM=0.165 tol=2.04 2024-05-07 11:33:19,438 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=73.8 pTM=0.493 ipTM=0.179 tol=3.86 2024-05-07 11:33:40,473 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=74.1 pTM=0.489 ipTM=0.243 tol=4.01 2024-05-07 11:34:01,499 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=74 pTM=0.494 ipTM=0.244 tol=2.19 2024-05-07 11:34:22,497 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=74.1 pTM=0.489 ipTM=0.258 tol=3.08 2024-05-07 11:34:22,498 alphafold2_multimer_v3_model_5_seed_000 took 651.1s (30 recycles) 2024-05-07 11:34:23,088 reranking models by 'multimer' metric 2024-05-07 11:34:26,099 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-05-07 11:35:32,732 Relaxation took 69.6s 2024-05-07 11:35:32,732 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=74.1 pTM=0.489 ipTM=0.258 2024-05-07 11:37:22,097 Relaxation took 109.4s 2024-05-07 11:37:22,097 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=73.6 pTM=0.473 ipTM=0.257 2024-05-07 11:38:45,898 Relaxation took 83.8s 2024-05-07 11:38:45,898 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=74.4 pTM=0.504 ipTM=0.225 2024-05-07 11:40:15,835 Relaxation took 89.9s 2024-05-07 11:40:15,835 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=75.7 pTM=0.481 ipTM=0.205 2024-05-07 11:41:22,349 Relaxation took 66.5s 2024-05-07 11:41:22,349 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=74.8 pTM=0.476 ipTM=0.193 2024-05-07 11:41:24,275 Done