2024-05-07 20:05:11,520 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-05-07 20:05:18,192 Running on GPU
2024-05-07 20:05:40,287 Found 6 citations for tools or databases
2024-05-07 20:05:40,287 Query 1/1: SOX9 (length 509)
2024-05-07 20:05:46,661 Setting max_seq=512, max_extra_seq=5120
2024-05-07 20:10:05,505 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=51.3 pTM=0.311
2024-05-07 20:10:11,215 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=52.2 pTM=0.333 tol=12.6
2024-05-07 20:10:16,903 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=53.8 pTM=0.332 tol=9.54
2024-05-07 20:10:22,591 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=52.9 pTM=0.33 tol=6.89
2024-05-07 20:10:28,283 alphafold2_ptm_model_1_seed_000 recycle=4 pLDDT=53.2 pTM=0.332 tol=8.03
2024-05-07 20:10:33,972 alphafold2_ptm_model_1_seed_000 recycle=5 pLDDT=53.1 pTM=0.331 tol=6.56
2024-05-07 20:10:39,668 alphafold2_ptm_model_1_seed_000 recycle=6 pLDDT=53.1 pTM=0.328 tol=5.71
2024-05-07 20:10:45,366 alphafold2_ptm_model_1_seed_000 recycle=7 pLDDT=53.3 pTM=0.325 tol=5.57
2024-05-07 20:10:51,069 alphafold2_ptm_model_1_seed_000 recycle=8 pLDDT=53.1 pTM=0.33 tol=5.48
2024-05-07 20:10:56,769 alphafold2_ptm_model_1_seed_000 recycle=9 pLDDT=53.2 pTM=0.331 tol=6.33
2024-05-07 20:11:02,471 alphafold2_ptm_model_1_seed_000 recycle=10 pLDDT=53 pTM=0.33 tol=4.88
2024-05-07 20:11:08,176 alphafold2_ptm_model_1_seed_000 recycle=11 pLDDT=53.1 pTM=0.327 tol=6.8
2024-05-07 20:11:13,887 alphafold2_ptm_model_1_seed_000 recycle=12 pLDDT=52.8 pTM=0.328 tol=5.68
2024-05-07 20:11:19,594 alphafold2_ptm_model_1_seed_000 recycle=13 pLDDT=53.5 pTM=0.327 tol=6.72
2024-05-07 20:11:25,304 alphafold2_ptm_model_1_seed_000 recycle=14 pLDDT=53.3 pTM=0.329 tol=5.47
2024-05-07 20:11:31,022 alphafold2_ptm_model_1_seed_000 recycle=15 pLDDT=53.3 pTM=0.329 tol=5.18
2024-05-07 20:11:36,740 alphafold2_ptm_model_1_seed_000 recycle=16 pLDDT=53.1 pTM=0.328 tol=5.99
2024-05-07 20:11:42,456 alphafold2_ptm_model_1_seed_000 recycle=17 pLDDT=53.6 pTM=0.332 tol=6.45
2024-05-07 20:11:48,168 alphafold2_ptm_model_1_seed_000 recycle=18 pLDDT=52.7 pTM=0.332 tol=6.71
2024-05-07 20:11:53,873 alphafold2_ptm_model_1_seed_000 recycle=19 pLDDT=53.3 pTM=0.335 tol=5.7
2024-05-07 20:11:59,602 alphafold2_ptm_model_1_seed_000 recycle=20 pLDDT=53.1 pTM=0.338 tol=6.13
2024-05-07 20:12:05,318 alphafold2_ptm_model_1_seed_000 recycle=21 pLDDT=54.1 pTM=0.335 tol=5.99
2024-05-07 20:12:11,045 alphafold2_ptm_model_1_seed_000 recycle=22 pLDDT=53 pTM=0.338 tol=5.54
2024-05-07 20:12:16,771 alphafold2_ptm_model_1_seed_000 recycle=23 pLDDT=53.8 pTM=0.334 tol=6.22
2024-05-07 20:12:22,502 alphafold2_ptm_model_1_seed_000 recycle=24 pLDDT=53.2 pTM=0.334 tol=6.07
2024-05-07 20:12:28,235 alphafold2_ptm_model_1_seed_000 recycle=25 pLDDT=52.6 pTM=0.329 tol=11.3
2024-05-07 20:12:33,950 alphafold2_ptm_model_1_seed_000 recycle=26 pLDDT=52.3 pTM=0.336 tol=6.96
2024-05-07 20:12:39,674 alphafold2_ptm_model_1_seed_000 recycle=27 pLDDT=52.9 pTM=0.343 tol=5.54
2024-05-07 20:12:45,402 alphafold2_ptm_model_1_seed_000 recycle=28 pLDDT=52.1 pTM=0.332 tol=4.88
2024-05-07 20:12:51,134 alphafold2_ptm_model_1_seed_000 recycle=29 pLDDT=52.5 pTM=0.341 tol=5.65
2024-05-07 20:12:56,869 alphafold2_ptm_model_1_seed_000 recycle=30 pLDDT=52.5 pTM=0.336 tol=7.11
2024-05-07 20:12:56,870 alphafold2_ptm_model_1_seed_000 took 293.4s (30 recycles)
2024-05-07 20:13:02,852 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=48.7 pTM=0.264
2024-05-07 20:13:08,638 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=50.3 pTM=0.295 tol=20.4
2024-05-07 20:13:14,411 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=51.2 pTM=0.267 tol=11.1
2024-05-07 20:13:20,178 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=51.2 pTM=0.295 tol=15.5
2024-05-07 20:13:25,941 alphafold2_ptm_model_2_seed_000 recycle=4 pLDDT=50.3 pTM=0.289 tol=6.29
2024-05-07 20:13:31,702 alphafold2_ptm_model_2_seed_000 recycle=5 pLDDT=49.3 pTM=0.271 tol=15.8
2024-05-07 20:13:37,464 alphafold2_ptm_model_2_seed_000 recycle=6 pLDDT=50.4 pTM=0.289 tol=13.8
2024-05-07 20:13:43,232 alphafold2_ptm_model_2_seed_000 recycle=7 pLDDT=49.4 pTM=0.271 tol=13.7
2024-05-07 20:13:48,996 alphafold2_ptm_model_2_seed_000 recycle=8 pLDDT=50.3 pTM=0.291 tol=14.9
2024-05-07 20:13:54,759 alphafold2_ptm_model_2_seed_000 recycle=9 pLDDT=49.7 pTM=0.28 tol=14.6
2024-05-07 20:14:00,529 alphafold2_ptm_model_2_seed_000 recycle=10 pLDDT=49.9 pTM=0.286 tol=14.1
2024-05-07 20:14:06,285 alphafold2_ptm_model_2_seed_000 recycle=11 pLDDT=49.3 pTM=0.275 tol=13.3
2024-05-07 20:14:12,051 alphafold2_ptm_model_2_seed_000 recycle=12 pLDDT=50.1 pTM=0.291 tol=13.1
2024-05-07 20:14:17,819 alphafold2_ptm_model_2_seed_000 recycle=13 pLDDT=49.2 pTM=0.272 tol=13.6
2024-05-07 20:14:23,574 alphafold2_ptm_model_2_seed_000 recycle=14 pLDDT=50.5 pTM=0.289 tol=13.9
2024-05-07 20:14:29,337 alphafold2_ptm_model_2_seed_000 recycle=15 pLDDT=49 pTM=0.272 tol=13.7
2024-05-07 20:14:35,105 alphafold2_ptm_model_2_seed_000 recycle=16 pLDDT=50.3 pTM=0.29 tol=13.4
2024-05-07 20:14:40,872 alphafold2_ptm_model_2_seed_000 recycle=17 pLDDT=50.2 pTM=0.291 tol=13.9
2024-05-07 20:14:46,641 alphafold2_ptm_model_2_seed_000 recycle=18 pLDDT=50 pTM=0.289 tol=11.7
2024-05-07 20:14:52,412 alphafold2_ptm_model_2_seed_000 recycle=19 pLDDT=49.5 pTM=0.274 tol=11
2024-05-07 20:14:58,182 alphafold2_ptm_model_2_seed_000 recycle=20 pLDDT=50.4 pTM=0.286 tol=11.2
2024-05-07 20:15:03,949 alphafold2_ptm_model_2_seed_000 recycle=21 pLDDT=49.3 pTM=0.274 tol=10.8
2024-05-07 20:15:09,717 alphafold2_ptm_model_2_seed_000 recycle=22 pLDDT=50.5 pTM=0.296 tol=10.8
2024-05-07 20:15:15,488 alphafold2_ptm_model_2_seed_000 recycle=23 pLDDT=48.9 pTM=0.273 tol=11.5
2024-05-07 20:15:21,259 alphafold2_ptm_model_2_seed_000 recycle=24 pLDDT=50.5 pTM=0.291 tol=11.1
2024-05-07 20:15:27,026 alphafold2_ptm_model_2_seed_000 recycle=25 pLDDT=49 pTM=0.272 tol=10.7
2024-05-07 20:15:32,801 alphafold2_ptm_model_2_seed_000 recycle=26 pLDDT=50.5 pTM=0.295 tol=10.8
2024-05-07 20:15:38,565 alphafold2_ptm_model_2_seed_000 recycle=27 pLDDT=48.9 pTM=0.274 tol=10.6
2024-05-07 20:15:44,329 alphafold2_ptm_model_2_seed_000 recycle=28 pLDDT=50.4 pTM=0.291 tol=10.5
2024-05-07 20:15:50,095 alphafold2_ptm_model_2_seed_000 recycle=29 pLDDT=49.1 pTM=0.275 tol=10.2
2024-05-07 20:15:55,864 alphafold2_ptm_model_2_seed_000 recycle=30 pLDDT=50.2 pTM=0.293 tol=10.5
2024-05-07 20:15:55,865 alphafold2_ptm_model_2_seed_000 took 178.8s (30 recycles)
2024-05-07 20:16:01,796 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=50.2 pTM=0.298
2024-05-07 20:16:07,546 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=51.6 pTM=0.33 tol=12.8
2024-05-07 20:16:13,281 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=51.9 pTM=0.331 tol=5.9
2024-05-07 20:16:19,017 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=52.1 pTM=0.332 tol=3.53
2024-05-07 20:16:24,758 alphafold2_ptm_model_3_seed_000 recycle=4 pLDDT=52.1 pTM=0.33 tol=2.93
2024-05-07 20:16:30,495 alphafold2_ptm_model_3_seed_000 recycle=5 pLDDT=52.1 pTM=0.329 tol=3.01
2024-05-07 20:16:36,231 alphafold2_ptm_model_3_seed_000 recycle=6 pLDDT=52.2 pTM=0.332 tol=2.76
2024-05-07 20:16:41,968 alphafold2_ptm_model_3_seed_000 recycle=7 pLDDT=52.3 pTM=0.331 tol=1.95
2024-05-07 20:16:47,718 alphafold2_ptm_model_3_seed_000 recycle=8 pLDDT=52.4 pTM=0.33 tol=2.78
2024-05-07 20:16:53,457 alphafold2_ptm_model_3_seed_000 recycle=9 pLDDT=52.2 pTM=0.333 tol=2.44
2024-05-07 20:16:59,192 alphafold2_ptm_model_3_seed_000 recycle=10 pLDDT=52.3 pTM=0.333 tol=1.8
2024-05-07 20:17:04,925 alphafold2_ptm_model_3_seed_000 recycle=11 pLDDT=52.3 pTM=0.33 tol=1.91
2024-05-07 20:17:10,663 alphafold2_ptm_model_3_seed_000 recycle=12 pLDDT=52.4 pTM=0.334 tol=2.34
2024-05-07 20:17:16,402 alphafold2_ptm_model_3_seed_000 recycle=13 pLDDT=52.8 pTM=0.334 tol=2.97
2024-05-07 20:17:22,150 alphafold2_ptm_model_3_seed_000 recycle=14 pLDDT=52.4 pTM=0.329 tol=2.4
2024-05-07 20:17:27,896 alphafold2_ptm_model_3_seed_000 recycle=15 pLDDT=52.4 pTM=0.332 tol=1.7
2024-05-07 20:17:33,645 alphafold2_ptm_model_3_seed_000 recycle=16 pLDDT=52.6 pTM=0.332 tol=1.79
2024-05-07 20:17:39,393 alphafold2_ptm_model_3_seed_000 recycle=17 pLDDT=52.7 pTM=0.334 tol=2.75
2024-05-07 20:17:45,142 alphafold2_ptm_model_3_seed_000 recycle=18 pLDDT=52.6 pTM=0.335 tol=2.55
2024-05-07 20:17:50,887 alphafold2_ptm_model_3_seed_000 recycle=19 pLDDT=52.3 pTM=0.333 tol=2.32
2024-05-07 20:17:56,640 alphafold2_ptm_model_3_seed_000 recycle=20 pLDDT=52.4 pTM=0.334 tol=1.66
2024-05-07 20:18:02,386 alphafold2_ptm_model_3_seed_000 recycle=21 pLDDT=52.5 pTM=0.33 tol=2.3
2024-05-07 20:18:08,136 alphafold2_ptm_model_3_seed_000 recycle=22 pLDDT=52.3 pTM=0.332 tol=2.86
2024-05-07 20:18:13,880 alphafold2_ptm_model_3_seed_000 recycle=23 pLDDT=52.7 pTM=0.328 tol=1.93
2024-05-07 20:18:19,631 alphafold2_ptm_model_3_seed_000 recycle=24 pLDDT=52.5 pTM=0.333 tol=1.91
2024-05-07 20:18:25,380 alphafold2_ptm_model_3_seed_000 recycle=25 pLDDT=52.6 pTM=0.333 tol=1.98
2024-05-07 20:18:31,128 alphafold2_ptm_model_3_seed_000 recycle=26 pLDDT=52.7 pTM=0.331 tol=2.57
2024-05-07 20:18:36,876 alphafold2_ptm_model_3_seed_000 recycle=27 pLDDT=52.4 pTM=0.331 tol=2.42
2024-05-07 20:18:42,626 alphafold2_ptm_model_3_seed_000 recycle=28 pLDDT=52.6 pTM=0.328 tol=2.3
2024-05-07 20:18:48,377 alphafold2_ptm_model_3_seed_000 recycle=29 pLDDT=52.4 pTM=0.33 tol=2.31
2024-05-07 20:18:54,125 alphafold2_ptm_model_3_seed_000 recycle=30 pLDDT=52.3 pTM=0.33 tol=2.28
2024-05-07 20:18:54,126 alphafold2_ptm_model_3_seed_000 took 178.1s (30 recycles)
2024-05-07 20:19:00,069 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=44.2 pTM=0.308
2024-05-07 20:19:05,825 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=47.2 pTM=0.353 tol=16
2024-05-07 20:19:11,579 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=48.1 pTM=0.348 tol=6.26
2024-05-07 20:19:17,328 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=49 pTM=0.352 tol=4.83
2024-05-07 20:19:23,067 alphafold2_ptm_model_4_seed_000 recycle=4 pLDDT=48.6 pTM=0.354 tol=4.48
2024-05-07 20:19:28,804 alphafold2_ptm_model_4_seed_000 recycle=5 pLDDT=48.7 pTM=0.346 tol=5.45
2024-05-07 20:19:34,555 alphafold2_ptm_model_4_seed_000 recycle=6 pLDDT=48.9 pTM=0.346 tol=5.16
2024-05-07 20:19:40,310 alphafold2_ptm_model_4_seed_000 recycle=7 pLDDT=49.3 pTM=0.353 tol=4.13
2024-05-07 20:19:46,067 alphafold2_ptm_model_4_seed_000 recycle=8 pLDDT=49.6 pTM=0.353 tol=7.05
2024-05-07 20:19:51,817 alphafold2_ptm_model_4_seed_000 recycle=9 pLDDT=49.2 pTM=0.354 tol=6.84
2024-05-07 20:19:57,568 alphafold2_ptm_model_4_seed_000 recycle=10 pLDDT=48.9 pTM=0.351 tol=4.05
2024-05-07 20:20:03,323 alphafold2_ptm_model_4_seed_000 recycle=11 pLDDT=49.4 pTM=0.348 tol=5.22
2024-05-07 20:20:09,082 alphafold2_ptm_model_4_seed_000 recycle=12 pLDDT=49.4 pTM=0.351 tol=4.79
2024-05-07 20:20:14,840 alphafold2_ptm_model_4_seed_000 recycle=13 pLDDT=49.8 pTM=0.354 tol=2.95
2024-05-07 20:20:20,596 alphafold2_ptm_model_4_seed_000 recycle=14 pLDDT=49.7 pTM=0.348 tol=4.23
2024-05-07 20:20:26,348 alphafold2_ptm_model_4_seed_000 recycle=15 pLDDT=49.3 pTM=0.35 tol=4.01
2024-05-07 20:20:32,096 alphafold2_ptm_model_4_seed_000 recycle=16 pLDDT=49.2 pTM=0.346 tol=2.44
2024-05-07 20:20:37,851 alphafold2_ptm_model_4_seed_000 recycle=17 pLDDT=49.3 pTM=0.347 tol=4.77
2024-05-07 20:20:43,602 alphafold2_ptm_model_4_seed_000 recycle=18 pLDDT=49.4 pTM=0.35 tol=4.53
2024-05-07 20:20:49,352 alphafold2_ptm_model_4_seed_000 recycle=19 pLDDT=49.4 pTM=0.355 tol=2.9
2024-05-07 20:20:55,106 alphafold2_ptm_model_4_seed_000 recycle=20 pLDDT=49.2 pTM=0.352 tol=4.18
2024-05-07 20:21:00,858 alphafold2_ptm_model_4_seed_000 recycle=21 pLDDT=49.3 pTM=0.347 tol=4.34
2024-05-07 20:21:06,606 alphafold2_ptm_model_4_seed_000 recycle=22 pLDDT=49.6 pTM=0.355 tol=3.15
2024-05-07 20:21:12,361 alphafold2_ptm_model_4_seed_000 recycle=23 pLDDT=48.9 pTM=0.345 tol=2.76
2024-05-07 20:21:18,109 alphafold2_ptm_model_4_seed_000 recycle=24 pLDDT=49.1 pTM=0.348 tol=4.06
2024-05-07 20:21:23,850 alphafold2_ptm_model_4_seed_000 recycle=25 pLDDT=49.3 pTM=0.354 tol=4.02
2024-05-07 20:21:29,588 alphafold2_ptm_model_4_seed_000 recycle=26 pLDDT=48.8 pTM=0.35 tol=2.91
2024-05-07 20:21:35,337 alphafold2_ptm_model_4_seed_000 recycle=27 pLDDT=49.1 pTM=0.348 tol=3.79
2024-05-07 20:21:41,098 alphafold2_ptm_model_4_seed_000 recycle=28 pLDDT=49.1 pTM=0.346 tol=3.77
2024-05-07 20:21:46,856 alphafold2_ptm_model_4_seed_000 recycle=29 pLDDT=49.3 pTM=0.347 tol=2.54
2024-05-07 20:21:52,617 alphafold2_ptm_model_4_seed_000 recycle=30 pLDDT=49 pTM=0.349 tol=3.54
2024-05-07 20:21:52,617 alphafold2_ptm_model_4_seed_000 took 178.3s (30 recycles)
2024-05-07 20:21:58,573 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=47.6 pTM=0.284
2024-05-07 20:22:04,335 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=49.6 pTM=0.314 tol=12.5
2024-05-07 20:22:10,098 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=49.7 pTM=0.32 tol=9.73
2024-05-07 20:22:15,847 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=49.8 pTM=0.325 tol=7.66
2024-05-07 20:22:21,625 alphafold2_ptm_model_5_seed_000 recycle=4 pLDDT=50.1 pTM=0.323 tol=6.27
2024-05-07 20:22:27,401 alphafold2_ptm_model_5_seed_000 recycle=5 pLDDT=50.1 pTM=0.328 tol=5.54
2024-05-07 20:22:33,181 alphafold2_ptm_model_5_seed_000 recycle=6 pLDDT=50.3 pTM=0.325 tol=5.05
2024-05-07 20:22:38,950 alphafold2_ptm_model_5_seed_000 recycle=7 pLDDT=50.6 pTM=0.324 tol=5.02
2024-05-07 20:22:44,710 alphafold2_ptm_model_5_seed_000 recycle=8 pLDDT=50.4 pTM=0.328 tol=5.97
2024-05-07 20:22:50,477 alphafold2_ptm_model_5_seed_000 recycle=9 pLDDT=50 pTM=0.326 tol=5.43
2024-05-07 20:22:56,233 alphafold2_ptm_model_5_seed_000 recycle=10 pLDDT=50.2 pTM=0.325 tol=5.79
2024-05-07 20:23:02,000 alphafold2_ptm_model_5_seed_000 recycle=11 pLDDT=50.5 pTM=0.327 tol=6.76
2024-05-07 20:23:07,764 alphafold2_ptm_model_5_seed_000 recycle=12 pLDDT=50.5 pTM=0.327 tol=5.15
2024-05-07 20:23:13,532 alphafold2_ptm_model_5_seed_000 recycle=13 pLDDT=50.4 pTM=0.326 tol=5.56
2024-05-07 20:23:19,299 alphafold2_ptm_model_5_seed_000 recycle=14 pLDDT=50.7 pTM=0.325 tol=5.88
2024-05-07 20:23:25,059 alphafold2_ptm_model_5_seed_000 recycle=15 pLDDT=50.3 pTM=0.327 tol=4.9
2024-05-07 20:23:30,819 alphafold2_ptm_model_5_seed_000 recycle=16 pLDDT=50.4 pTM=0.331 tol=5.48
2024-05-07 20:23:36,575 alphafold2_ptm_model_5_seed_000 recycle=17 pLDDT=50.3 pTM=0.332 tol=5.36
2024-05-07 20:23:42,336 alphafold2_ptm_model_5_seed_000 recycle=18 pLDDT=50.2 pTM=0.328 tol=4.55
2024-05-07 20:23:48,096 alphafold2_ptm_model_5_seed_000 recycle=19 pLDDT=50.2 pTM=0.328 tol=5.41
2024-05-07 20:23:53,864 alphafold2_ptm_model_5_seed_000 recycle=20 pLDDT=50 pTM=0.328 tol=6.05
2024-05-07 20:23:59,626 alphafold2_ptm_model_5_seed_000 recycle=21 pLDDT=50.2 pTM=0.327 tol=5.09
2024-05-07 20:24:05,390 alphafold2_ptm_model_5_seed_000 recycle=22 pLDDT=50.2 pTM=0.329 tol=4.14
2024-05-07 20:24:11,159 alphafold2_ptm_model_5_seed_000 recycle=23 pLDDT=50.3 pTM=0.324 tol=4.77
2024-05-07 20:24:16,920 alphafold2_ptm_model_5_seed_000 recycle=24 pLDDT=50.4 pTM=0.325 tol=4.99
2024-05-07 20:24:22,680 alphafold2_ptm_model_5_seed_000 recycle=25 pLDDT=50.4 pTM=0.33 tol=4.63
2024-05-07 20:24:28,443 alphafold2_ptm_model_5_seed_000 recycle=26 pLDDT=50.4 pTM=0.329 tol=5.32
2024-05-07 20:24:34,200 alphafold2_ptm_model_5_seed_000 recycle=27 pLDDT=50.3 pTM=0.328 tol=5.27
2024-05-07 20:24:39,967 alphafold2_ptm_model_5_seed_000 recycle=28 pLDDT=50.1 pTM=0.327 tol=6.44
2024-05-07 20:24:45,732 alphafold2_ptm_model_5_seed_000 recycle=29 pLDDT=50.3 pTM=0.326 tol=5.46
2024-05-07 20:24:51,491 alphafold2_ptm_model_5_seed_000 recycle=30 pLDDT=50.2 pTM=0.329 tol=5.64
2024-05-07 20:24:51,491 alphafold2_ptm_model_5_seed_000 took 178.7s (30 recycles)
2024-05-07 20:24:51,672 reranking models by 'plddt' metric
2024-05-07 20:25:14,020 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-05-07 20:25:52,576 Relaxation took 60.9s
2024-05-07 20:25:52,576 rank_001_alphafold2_ptm_model_1_seed_000 pLDDT=52.5 pTM=0.336
2024-05-07 20:26:04,601 Relaxation took 12.0s
2024-05-07 20:26:04,601 rank_002_alphafold2_ptm_model_3_seed_000 pLDDT=52.3 pTM=0.33
2024-05-07 20:26:33,175 Relaxation took 28.6s
2024-05-07 20:26:33,175 rank_003_alphafold2_ptm_model_2_seed_000 pLDDT=50.2 pTM=0.293
2024-05-07 20:26:45,202 Relaxation took 12.0s
2024-05-07 20:26:45,203 rank_004_alphafold2_ptm_model_5_seed_000 pLDDT=50.2 pTM=0.329
2024-05-07 20:26:59,900 Relaxation took 14.7s
2024-05-07 20:26:59,900 rank_005_alphafold2_ptm_model_4_seed_000 pLDDT=49 pTM=0.349
2024-05-07 20:27:01,444 Done