2024-07-25 15:50:25,740 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-25 15:50:27,043 Running on GPU 2024-07-25 15:50:30,652 Found 6 citations for tools or databases 2024-07-25 15:50:30,652 Query 1/1: AASDHPPT_FBXL8 (length 683) 2024-07-25 15:50:37,182 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:50:43,209 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:50:49,237 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:50:55,264 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:51:01,291 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:51:07,319 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:51:13,343 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:51:19,370 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:51:25,397 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:51:31,424 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:51:37,451 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:51:43,479 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:51:49,506 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:51:55,534 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:52:01,561 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:52:09,264 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:52:15,292 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:52:21,319 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:52:27,347 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:52:33,374 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:52:39,401 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:52:45,428 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:52:51,455 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:52:57,482 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:53:03,509 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:53:09,536 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:53:15,559 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:53:21,586 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:53:27,613 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:53:33,640 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:53:39,974 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:53:46,001 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:53:52,028 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:53:58,055 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:54:04,083 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:54:10,110 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:54:16,137 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:54:22,164 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:54:28,191 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:54:34,218 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:54:40,246 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:54:46,273 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:54:52,300 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:54:58,327 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:55:04,354 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:55:06,322 Setting max_seq=508, max_extra_seq=2048 2024-07-25 15:57:54,449 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=79.5 pTM=0.555 ipTM=0.172 2024-07-25 15:58:03,632 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=78.5 pTM=0.561 ipTM=0.19 tol=4.93 2024-07-25 15:58:12,834 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=78.6 pTM=0.537 ipTM=0.143 tol=3.91 2024-07-25 15:58:22,028 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=78.8 pTM=0.534 ipTM=0.141 tol=1.74 2024-07-25 15:58:31,225 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=78.7 pTM=0.541 ipTM=0.154 tol=4.6 2024-07-25 15:58:40,425 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=80.2 pTM=0.537 ipTM=0.145 tol=6.99 2024-07-25 15:58:49,634 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=80.6 pTM=0.543 ipTM=0.139 tol=2.21 2024-07-25 15:58:58,842 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=80.8 pTM=0.543 ipTM=0.148 tol=2.18 2024-07-25 15:59:08,066 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=80.7 pTM=0.545 ipTM=0.143 tol=2.4 2024-07-25 15:59:17,290 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=80.9 pTM=0.549 ipTM=0.148 tol=1.14 2024-07-25 15:59:26,522 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=80.7 pTM=0.549 ipTM=0.145 tol=0.951 2024-07-25 15:59:35,746 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=80.3 pTM=0.55 ipTM=0.15 tol=1.59 2024-07-25 15:59:44,990 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=80.4 pTM=0.55 ipTM=0.146 tol=1.33 2024-07-25 15:59:54,227 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=80.6 pTM=0.553 ipTM=0.148 tol=2.21 2024-07-25 16:00:03,474 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=80.9 pTM=0.55 ipTM=0.141 tol=2.72 2024-07-25 16:00:12,719 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=80.8 pTM=0.557 ipTM=0.149 tol=1.76 2024-07-25 16:00:21,966 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=80.6 pTM=0.553 ipTM=0.145 tol=0.748 2024-07-25 16:00:31,218 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=80.9 pTM=0.56 ipTM=0.153 tol=2.3 2024-07-25 16:00:40,462 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=80.8 pTM=0.55 ipTM=0.139 tol=2.69 2024-07-25 16:00:49,708 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=80.7 pTM=0.561 ipTM=0.157 tol=3 2024-07-25 16:00:58,944 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=80.6 pTM=0.547 ipTM=0.14 tol=2.91 2024-07-25 16:01:08,188 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=80.8 pTM=0.557 ipTM=0.151 tol=2.37 2024-07-25 16:01:17,441 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=80.6 pTM=0.554 ipTM=0.146 tol=0.952 2024-07-25 16:01:26,696 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=81 pTM=0.559 ipTM=0.152 tol=1.85 2024-07-25 16:01:35,950 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=80.8 pTM=0.548 ipTM=0.137 tol=3.43 2024-07-25 16:01:45,198 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=80.8 pTM=0.554 ipTM=0.147 tol=2.97 2024-07-25 16:01:54,460 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=81 pTM=0.546 ipTM=0.137 tol=3.04 2024-07-25 16:02:03,708 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=80.8 pTM=0.559 ipTM=0.156 tol=4.21 2024-07-25 16:02:12,974 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=80.9 pTM=0.558 ipTM=0.147 tol=1.1 2024-07-25 16:02:22,218 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=80.9 pTM=0.561 ipTM=0.16 tol=1.41 2024-07-25 16:02:31,481 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=80.9 pTM=0.554 ipTM=0.143 tol=1.78 2024-07-25 16:02:31,481 alphafold2_multimer_v3_model_1_seed_000 took 440.0s (30 recycles) 2024-07-25 16:02:41,039 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=80.1 pTM=0.592 ipTM=0.246 2024-07-25 16:02:50,309 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=80 pTM=0.577 ipTM=0.215 tol=1.01 2024-07-25 16:02:59,563 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=80.4 pTM=0.561 ipTM=0.184 tol=1.62 2024-07-25 16:03:08,836 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=81.5 pTM=0.564 ipTM=0.178 tol=0.586 2024-07-25 16:03:18,092 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=81.2 pTM=0.553 ipTM=0.161 tol=1.81 2024-07-25 16:03:27,352 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=81.7 pTM=0.548 ipTM=0.147 tol=2.68 2024-07-25 16:03:36,612 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=81.7 pTM=0.545 ipTM=0.145 tol=2.51 2024-07-25 16:03:45,875 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=82.1 pTM=0.542 ipTM=0.145 tol=2.79 2024-07-25 16:03:55,139 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=81.8 pTM=0.543 ipTM=0.143 tol=1.64 2024-07-25 16:04:04,390 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=81.9 pTM=0.546 ipTM=0.147 tol=0.843 2024-07-25 16:04:13,650 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=81.8 pTM=0.544 ipTM=0.15 tol=1.11 2024-07-25 16:04:22,886 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=81.4 pTM=0.542 ipTM=0.151 tol=0.961 2024-07-25 16:04:32,130 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=81.4 pTM=0.544 ipTM=0.15 tol=2.37 2024-07-25 16:04:41,387 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=81.6 pTM=0.543 ipTM=0.144 tol=1.27 2024-07-25 16:04:50,633 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=81.5 pTM=0.544 ipTM=0.149 tol=1.36 2024-07-25 16:04:59,893 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=82 pTM=0.546 ipTM=0.146 tol=0.617 2024-07-25 16:05:09,138 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=81.8 pTM=0.547 ipTM=0.151 tol=0.772 2024-07-25 16:05:18,388 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=82 pTM=0.546 ipTM=0.146 tol=0.842 2024-07-25 16:05:27,640 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=82 pTM=0.547 ipTM=0.148 tol=1.24 2024-07-25 16:05:36,874 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=82.1 pTM=0.545 ipTM=0.143 tol=1.39 2024-07-25 16:05:46,119 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=81.9 pTM=0.546 ipTM=0.147 tol=1.31 2024-07-25 16:05:55,358 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=81.8 pTM=0.542 ipTM=0.144 tol=1.93 2024-07-25 16:06:04,597 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=81.9 pTM=0.546 ipTM=0.148 tol=2.03 2024-07-25 16:06:13,850 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=82.3 pTM=0.545 ipTM=0.144 tol=3.8 2024-07-25 16:06:23,100 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=82.1 pTM=0.546 ipTM=0.145 tol=2.25 2024-07-25 16:06:32,342 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=82.1 pTM=0.543 ipTM=0.145 tol=1.07 2024-07-25 16:06:41,588 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=81.8 pTM=0.543 ipTM=0.143 tol=1.85 2024-07-25 16:06:50,831 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=82.1 pTM=0.541 ipTM=0.142 tol=3.46 2024-07-25 16:07:00,097 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=82.4 pTM=0.545 ipTM=0.142 tol=2.69 2024-07-25 16:07:09,343 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=82 pTM=0.54 ipTM=0.142 tol=1.57 2024-07-25 16:07:18,587 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=82 pTM=0.542 ipTM=0.141 tol=1.69 2024-07-25 16:07:18,587 alphafold2_multimer_v3_model_2_seed_000 took 286.8s (30 recycles) 2024-07-25 16:07:28,136 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=78.4 pTM=0.567 ipTM=0.207 2024-07-25 16:07:37,388 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=79.8 pTM=0.564 ipTM=0.191 tol=1.4 2024-07-25 16:07:46,611 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=79.9 pTM=0.557 ipTM=0.172 tol=2.62 2024-07-25 16:07:55,836 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=80.7 pTM=0.579 ipTM=0.206 tol=2.31 2024-07-25 16:08:05,065 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=81.1 pTM=0.588 ipTM=0.216 tol=2.29 2024-07-25 16:08:14,318 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=82.3 pTM=0.589 ipTM=0.205 tol=1.41 2024-07-25 16:08:23,545 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=82.1 pTM=0.593 ipTM=0.213 tol=0.994 2024-07-25 16:08:32,796 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=82.6 pTM=0.586 ipTM=0.196 tol=1.81 2024-07-25 16:08:42,043 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=82.9 pTM=0.59 ipTM=0.202 tol=0.6 2024-07-25 16:08:51,292 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=82.8 pTM=0.587 ipTM=0.197 tol=0.49 2024-07-25 16:08:51,293 alphafold2_multimer_v3_model_3_seed_000 took 92.4s (9 recycles) 2024-07-25 16:09:00,856 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=78.1 pTM=0.591 ipTM=0.258 2024-07-25 16:09:10,123 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=78.4 pTM=0.535 ipTM=0.162 tol=8.57 2024-07-25 16:09:19,378 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=78.6 pTM=0.538 ipTM=0.171 tol=3.61 2024-07-25 16:09:28,638 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=78.8 pTM=0.54 ipTM=0.176 tol=2.09 2024-07-25 16:09:37,888 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=78.8 pTM=0.547 ipTM=0.192 tol=1.11 2024-07-25 16:09:47,132 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=78.8 pTM=0.539 ipTM=0.182 tol=1.31 2024-07-25 16:09:56,386 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=78.2 pTM=0.535 ipTM=0.19 tol=1.58 2024-07-25 16:10:05,644 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=78.6 pTM=0.535 ipTM=0.187 tol=1.26 2024-07-25 16:10:14,909 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=78.4 pTM=0.536 ipTM=0.196 tol=1.28 2024-07-25 16:10:24,160 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=78.6 pTM=0.533 ipTM=0.187 tol=0.967 2024-07-25 16:10:33,415 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=78.4 pTM=0.539 ipTM=0.205 tol=0.935 2024-07-25 16:10:42,676 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=78.1 pTM=0.535 ipTM=0.199 tol=0.752 2024-07-25 16:10:51,928 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=77.8 pTM=0.536 ipTM=0.201 tol=1.69 2024-07-25 16:11:01,190 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=77.9 pTM=0.531 ipTM=0.189 tol=1.47 2024-07-25 16:11:10,439 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=78.2 pTM=0.537 ipTM=0.2 tol=0.912 2024-07-25 16:11:19,708 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=78.2 pTM=0.533 ipTM=0.193 tol=1.11 2024-07-25 16:11:28,967 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=77.8 pTM=0.532 ipTM=0.195 tol=0.751 2024-07-25 16:11:38,228 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=77.9 pTM=0.531 ipTM=0.191 tol=0.884 2024-07-25 16:11:47,492 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=77.9 pTM=0.532 ipTM=0.189 tol=0.962 2024-07-25 16:11:56,736 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=77.9 pTM=0.533 ipTM=0.192 tol=1.56 2024-07-25 16:12:05,993 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=77.4 pTM=0.531 ipTM=0.191 tol=1.85 2024-07-25 16:12:15,248 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=77.9 pTM=0.531 ipTM=0.19 tol=1.38 2024-07-25 16:12:24,516 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=78 pTM=0.533 ipTM=0.196 tol=1.24 2024-07-25 16:12:33,785 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=77.8 pTM=0.535 ipTM=0.204 tol=1.38 2024-07-25 16:12:43,053 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=77.4 pTM=0.53 ipTM=0.186 tol=1.6 2024-07-25 16:12:52,307 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=77.9 pTM=0.534 ipTM=0.193 tol=1.57 2024-07-25 16:13:01,576 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=77.9 pTM=0.532 ipTM=0.19 tol=1.17 2024-07-25 16:13:10,836 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=77.7 pTM=0.537 ipTM=0.206 tol=0.889 2024-07-25 16:13:20,105 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=77.9 pTM=0.531 ipTM=0.19 tol=1.76 2024-07-25 16:13:29,359 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=77.8 pTM=0.539 ipTM=0.212 tol=0.89 2024-07-25 16:13:38,611 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=77.7 pTM=0.533 ipTM=0.193 tol=1.17 2024-07-25 16:13:38,612 alphafold2_multimer_v3_model_4_seed_000 took 287.0s (30 recycles) 2024-07-25 16:13:48,165 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=77.7 pTM=0.602 ipTM=0.273 2024-07-25 16:13:57,422 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=78.4 pTM=0.58 ipTM=0.227 tol=1.77 2024-07-25 16:14:06,700 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=79.2 pTM=0.569 ipTM=0.192 tol=1.54 2024-07-25 16:14:15,967 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=79.6 pTM=0.578 ipTM=0.204 tol=0.887 2024-07-25 16:14:25,233 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=80.1 pTM=0.58 ipTM=0.206 tol=0.59 2024-07-25 16:14:34,501 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=80.9 pTM=0.583 ipTM=0.203 tol=1.01 2024-07-25 16:14:43,769 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=80.8 pTM=0.583 ipTM=0.204 tol=0.987 2024-07-25 16:14:53,045 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=81.2 pTM=0.583 ipTM=0.198 tol=0.922 2024-07-25 16:15:02,327 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=81.1 pTM=0.579 ipTM=0.19 tol=1.15 2024-07-25 16:15:11,594 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=81.2 pTM=0.584 ipTM=0.198 tol=1.08 2024-07-25 16:15:20,870 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=81.4 pTM=0.583 ipTM=0.195 tol=1.28 2024-07-25 16:15:30,138 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=81.3 pTM=0.585 ipTM=0.201 tol=1.04 2024-07-25 16:15:39,405 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=81.3 pTM=0.583 ipTM=0.198 tol=0.974 2024-07-25 16:15:48,656 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=81 pTM=0.582 ipTM=0.198 tol=0.766 2024-07-25 16:15:57,931 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=81.3 pTM=0.582 ipTM=0.193 tol=0.746 2024-07-25 16:16:07,207 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=81.2 pTM=0.587 ipTM=0.204 tol=0.957 2024-07-25 16:16:16,473 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=81.2 pTM=0.584 ipTM=0.2 tol=0.924 2024-07-25 16:16:25,738 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=81.3 pTM=0.589 ipTM=0.21 tol=1.84 2024-07-25 16:16:35,000 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=81.2 pTM=0.582 ipTM=0.196 tol=2.42 2024-07-25 16:16:44,269 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=81.3 pTM=0.593 ipTM=0.216 tol=1.47 2024-07-25 16:16:53,528 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=81.1 pTM=0.58 ipTM=0.192 tol=1.06 2024-07-25 16:17:02,781 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=81 pTM=0.588 ipTM=0.209 tol=0.646 2024-07-25 16:17:12,056 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=81.5 pTM=0.587 ipTM=0.203 tol=0.85 2024-07-25 16:17:21,318 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=81.2 pTM=0.59 ipTM=0.213 tol=0.905 2024-07-25 16:17:30,586 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=81.2 pTM=0.586 ipTM=0.204 tol=2.34 2024-07-25 16:17:39,847 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=81.1 pTM=0.588 ipTM=0.209 tol=0.717 2024-07-25 16:17:49,114 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=81.2 pTM=0.588 ipTM=0.207 tol=1.05 2024-07-25 16:17:58,386 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=81.4 pTM=0.589 ipTM=0.207 tol=1.39 2024-07-25 16:18:07,675 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=81.8 pTM=0.585 ipTM=0.197 tol=1.21 2024-07-25 16:18:16,944 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=81.2 pTM=0.59 ipTM=0.209 tol=0.797 2024-07-25 16:18:26,211 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=81.4 pTM=0.582 ipTM=0.194 tol=0.907 2024-07-25 16:18:26,212 alphafold2_multimer_v3_model_5_seed_000 took 287.3s (30 recycles) 2024-07-25 16:18:26,510 reranking models by 'multimer' metric 2024-07-25 16:18:27,511 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-25 16:19:12,076 Relaxation took 45.6s 2024-07-25 16:19:12,076 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=82.8 pTM=0.587 ipTM=0.197 2024-07-25 16:19:39,153 Relaxation took 27.1s 2024-07-25 16:19:39,153 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=81.4 pTM=0.582 ipTM=0.194 2024-07-25 16:20:34,021 Relaxation took 54.9s 2024-07-25 16:20:34,022 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=77.7 pTM=0.533 ipTM=0.193 2024-07-25 16:21:17,636 Relaxation took 43.6s 2024-07-25 16:21:17,636 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=80.9 pTM=0.554 ipTM=0.143 2024-07-25 16:21:55,925 Relaxation took 38.3s 2024-07-25 16:21:55,925 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=82 pTM=0.542 ipTM=0.141 2024-07-25 16:21:57,208 Done