2024-07-25 15:50:25,740 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-25 15:50:27,043 Running on GPU
2024-07-25 15:50:30,652 Found 6 citations for tools or databases
2024-07-25 15:50:30,652 Query 1/1: ABI2_FBXO4 (length 862)
2024-07-25 15:50:37,159 Timeout while fetching result from MSA server. Retrying...
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2024-07-25 15:54:52,277 Timeout while fetching result from MSA server. Retrying...
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2024-07-25 15:55:04,331 Timeout while fetching result from MSA server. Retrying...
2024-07-25 15:55:07,586 Setting max_seq=508, max_extra_seq=2048
2024-07-25 15:57:49,664 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=50.7 pTM=0.426 ipTM=0.232
2024-07-25 15:58:05,033 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=52.2 pTM=0.434 ipTM=0.27 tol=22.5
2024-07-25 15:58:20,446 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=53.6 pTM=0.433 ipTM=0.262 tol=10.4
2024-07-25 15:58:35,903 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=53.1 pTM=0.429 ipTM=0.213 tol=5.02
2024-07-25 15:58:51,400 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=53.3 pTM=0.423 ipTM=0.172 tol=12.2
2024-07-25 15:59:06,919 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=53 pTM=0.427 ipTM=0.265 tol=8.41
2024-07-25 15:59:22,454 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=52.9 pTM=0.427 ipTM=0.26 tol=9.66
2024-07-25 15:59:38,002 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=53 pTM=0.424 ipTM=0.256 tol=7.04
2024-07-25 15:59:53,547 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=53 pTM=0.428 ipTM=0.277 tol=3.73
2024-07-25 16:00:09,097 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=53.2 pTM=0.43 ipTM=0.281 tol=2.77
2024-07-25 16:00:24,647 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=53.6 pTM=0.432 ipTM=0.276 tol=4.67
2024-07-25 16:00:40,240 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=53.2 pTM=0.426 ipTM=0.246 tol=4.73
2024-07-25 16:00:55,828 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=53.6 pTM=0.429 ipTM=0.235 tol=4.34
2024-07-25 16:01:11,399 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=53.3 pTM=0.427 ipTM=0.196 tol=6.22
2024-07-25 16:01:26,970 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=53.6 pTM=0.427 ipTM=0.215 tol=6.68
2024-07-25 16:01:42,543 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=53.2 pTM=0.428 ipTM=0.251 tol=3.26
2024-07-25 16:01:58,138 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=54.1 pTM=0.434 ipTM=0.273 tol=2.91
2024-07-25 16:02:13,724 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=53.6 pTM=0.431 ipTM=0.247 tol=3.86
2024-07-25 16:02:29,302 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=54.8 pTM=0.438 ipTM=0.277 tol=3.06
2024-07-25 16:02:44,877 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=54.4 pTM=0.438 ipTM=0.296 tol=4.09
2024-07-25 16:03:00,456 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=54.3 pTM=0.438 ipTM=0.284 tol=4.88
2024-07-25 16:03:16,034 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=53.8 pTM=0.432 ipTM=0.28 tol=3.02
2024-07-25 16:03:31,625 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=54.2 pTM=0.438 ipTM=0.283 tol=5.41
2024-07-25 16:03:47,223 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=53.8 pTM=0.435 ipTM=0.258 tol=3.84
2024-07-25 16:04:02,819 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=54.1 pTM=0.434 ipTM=0.269 tol=3.21
2024-07-25 16:04:18,465 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=53.6 pTM=0.429 ipTM=0.259 tol=2.15
2024-07-25 16:04:34,050 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=53.4 pTM=0.431 ipTM=0.29 tol=4.27
2024-07-25 16:04:49,634 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=53.5 pTM=0.431 ipTM=0.269 tol=3.55
2024-07-25 16:05:05,208 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=53.5 pTM=0.431 ipTM=0.248 tol=5.71
2024-07-25 16:05:20,789 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=53.4 pTM=0.427 ipTM=0.209 tol=8.02
2024-07-25 16:05:36,357 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=53.8 pTM=0.429 ipTM=0.229 tol=4.82
2024-07-25 16:05:36,357 alphafold2_multimer_v3_model_1_seed_000 took 624.8s (30 recycles)
2024-07-25 16:05:52,375 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=51.1 pTM=0.435 ipTM=0.214
2024-07-25 16:06:07,957 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=53.8 pTM=0.432 ipTM=0.23 tol=12.8
2024-07-25 16:06:23,553 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=53.9 pTM=0.432 ipTM=0.254 tol=6.8
2024-07-25 16:06:39,162 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=53.8 pTM=0.429 ipTM=0.26 tol=9.72
2024-07-25 16:06:54,792 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=53.8 pTM=0.479 ipTM=0.548 tol=20.6
2024-07-25 16:07:10,433 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=54.3 pTM=0.432 ipTM=0.201 tol=13.5
2024-07-25 16:07:26,046 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=53.9 pTM=0.43 ipTM=0.183 tol=17.3
2024-07-25 16:07:41,703 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=53.1 pTM=0.419 ipTM=0.176 tol=16.8
2024-07-25 16:07:57,315 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=53.2 pTM=0.428 ipTM=0.354 tol=11.4
2024-07-25 16:08:12,924 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=53.4 pTM=0.424 ipTM=0.24 tol=10.5
2024-07-25 16:08:28,535 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=53.2 pTM=0.422 ipTM=0.196 tol=4.64
2024-07-25 16:08:44,137 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=53.5 pTM=0.422 ipTM=0.177 tol=11.1
2024-07-25 16:08:59,733 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=53.9 pTM=0.421 ipTM=0.148 tol=11.6
2024-07-25 16:09:15,334 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=53.8 pTM=0.426 ipTM=0.261 tol=16.1
2024-07-25 16:09:30,924 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=54.6 pTM=0.433 ipTM=0.296 tol=7.64
2024-07-25 16:09:46,524 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=54.8 pTM=0.436 ipTM=0.255 tol=10.1
2024-07-25 16:10:02,125 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=54.8 pTM=0.437 ipTM=0.316 tol=4.27
2024-07-25 16:10:17,732 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=54.8 pTM=0.433 ipTM=0.28 tol=7.79
2024-07-25 16:10:33,343 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=55.6 pTM=0.437 ipTM=0.328 tol=7.61
2024-07-25 16:10:48,958 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=55.3 pTM=0.435 ipTM=0.298 tol=3.96
2024-07-25 16:11:04,602 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=55.2 pTM=0.436 ipTM=0.336 tol=6.91
2024-07-25 16:11:20,237 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=54.8 pTM=0.43 ipTM=0.286 tol=5.61
2024-07-25 16:11:35,853 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=54.9 pTM=0.436 ipTM=0.341 tol=7.59
2024-07-25 16:11:51,483 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=54.8 pTM=0.432 ipTM=0.291 tol=2.43
2024-07-25 16:12:07,113 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=55.1 pTM=0.434 ipTM=0.336 tol=4.44
2024-07-25 16:12:22,751 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=54.9 pTM=0.43 ipTM=0.271 tol=3.79
2024-07-25 16:12:38,391 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=54.8 pTM=0.434 ipTM=0.335 tol=4.73
2024-07-25 16:12:54,013 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=54.8 pTM=0.429 ipTM=0.284 tol=5.21
2024-07-25 16:13:09,615 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=54.8 pTM=0.434 ipTM=0.314 tol=5.02
2024-07-25 16:13:25,237 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=54.9 pTM=0.432 ipTM=0.261 tol=3.74
2024-07-25 16:13:40,843 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=55 pTM=0.435 ipTM=0.325 tol=4.75
2024-07-25 16:13:40,843 alphafold2_multimer_v3_model_2_seed_000 took 484.0s (30 recycles)
2024-07-25 16:13:56,956 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=51.9 pTM=0.436 ipTM=0.265
2024-07-25 16:14:12,594 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=54.4 pTM=0.506 ipTM=0.657 tol=24.9
2024-07-25 16:14:28,273 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=53.7 pTM=0.443 ipTM=0.3 tol=13.2
2024-07-25 16:14:43,962 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=53.5 pTM=0.438 ipTM=0.181 tol=6.52
2024-07-25 16:14:59,599 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=53.3 pTM=0.486 ipTM=0.513 tol=14.4
2024-07-25 16:15:15,289 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=53.5 pTM=0.445 ipTM=0.175 tol=7.49
2024-07-25 16:15:30,965 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=53.4 pTM=0.448 ipTM=0.296 tol=9.22
2024-07-25 16:15:46,621 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=53.4 pTM=0.444 ipTM=0.173 tol=6.19
2024-07-25 16:16:02,256 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=53.2 pTM=0.483 ipTM=0.453 tol=10.1
2024-07-25 16:16:17,956 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=53.1 pTM=0.442 ipTM=0.164 tol=10.6
2024-07-25 16:16:33,613 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=52.6 pTM=0.479 ipTM=0.456 tol=13.5
2024-07-25 16:16:49,295 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=53.4 pTM=0.444 ipTM=0.163 tol=9.69
2024-07-25 16:17:04,985 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=53.1 pTM=0.445 ipTM=0.245 tol=7.02
2024-07-25 16:17:20,642 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=53.3 pTM=0.483 ipTM=0.503 tol=9.88
2024-07-25 16:17:36,356 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=53.1 pTM=0.443 ipTM=0.163 tol=13.1
2024-07-25 16:17:52,063 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=53.2 pTM=0.444 ipTM=0.158 tol=7.87
2024-07-25 16:18:07,755 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=53.2 pTM=0.447 ipTM=0.2 tol=7.17
2024-07-25 16:18:23,442 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=53.3 pTM=0.441 ipTM=0.159 tol=9.62
2024-07-25 16:18:39,090 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=53.1 pTM=0.489 ipTM=0.521 tol=18.2
2024-07-25 16:18:54,762 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=53.5 pTM=0.444 ipTM=0.178 tol=13.7
2024-07-25 16:19:10,448 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=52.8 pTM=0.447 ipTM=0.17 tol=10.5
2024-07-25 16:19:26,084 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=53.2 pTM=0.491 ipTM=0.531 tol=14.2
2024-07-25 16:19:41,787 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=52.9 pTM=0.443 ipTM=0.156 tol=8.7
2024-07-25 16:19:57,454 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=53.5 pTM=0.452 ipTM=0.334 tol=7.65
2024-07-25 16:20:13,149 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=53.6 pTM=0.443 ipTM=0.169 tol=8.48
2024-07-25 16:20:28,794 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=53.1 pTM=0.486 ipTM=0.504 tol=13
2024-07-25 16:20:44,502 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=53.3 pTM=0.442 ipTM=0.205 tol=9.05
2024-07-25 16:21:00,195 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=53.2 pTM=0.44 ipTM=0.157 tol=12.7
2024-07-25 16:21:15,870 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=52.9 pTM=0.482 ipTM=0.527 tol=10.8
2024-07-25 16:21:31,583 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=53.2 pTM=0.445 ipTM=0.149 tol=8.62
2024-07-25 16:21:47,290 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=52.8 pTM=0.442 ipTM=0.153 tol=7.11
2024-07-25 16:21:47,290 alphafold2_multimer_v3_model_3_seed_000 took 486.0s (30 recycles)
2024-07-25 16:22:03,374 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=48.5 pTM=0.448 ipTM=0.192
2024-07-25 16:22:19,105 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=50.7 pTM=0.494 ipTM=0.518 tol=22.4
2024-07-25 16:22:34,787 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=50.1 pTM=0.454 ipTM=0.213 tol=13.1
2024-07-25 16:22:50,482 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=50.1 pTM=0.453 ipTM=0.189 tol=11
2024-07-25 16:23:06,158 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=49.5 pTM=0.446 ipTM=0.166 tol=8.55
2024-07-25 16:23:21,846 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=49.8 pTM=0.462 ipTM=0.444 tol=19.4
2024-07-25 16:23:37,558 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=50.1 pTM=0.447 ipTM=0.169 tol=16.5
2024-07-25 16:23:53,239 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=50.2 pTM=0.444 ipTM=0.163 tol=14.6
2024-07-25 16:24:08,927 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=50.6 pTM=0.445 ipTM=0.171 tol=8.78
2024-07-25 16:24:24,632 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=50.3 pTM=0.444 ipTM=0.167 tol=4.75
2024-07-25 16:24:40,329 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=50.5 pTM=0.436 ipTM=0.163 tol=12
2024-07-25 16:24:56,024 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=50.7 pTM=0.441 ipTM=0.165 tol=7.66
2024-07-25 16:25:11,729 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=50.6 pTM=0.438 ipTM=0.179 tol=7.09
2024-07-25 16:25:27,442 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=50.6 pTM=0.441 ipTM=0.167 tol=6.24
2024-07-25 16:25:43,137 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=51 pTM=0.439 ipTM=0.173 tol=5.07
2024-07-25 16:25:58,829 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=50.7 pTM=0.445 ipTM=0.176 tol=4.12
2024-07-25 16:26:14,518 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=51.3 pTM=0.441 ipTM=0.177 tol=4.61
2024-07-25 16:26:30,215 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=50.5 pTM=0.439 ipTM=0.173 tol=4.2
2024-07-25 16:26:45,899 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=50.9 pTM=0.438 ipTM=0.168 tol=3.31
2024-07-25 16:27:01,581 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=50.8 pTM=0.442 ipTM=0.173 tol=3.71
2024-07-25 16:27:17,282 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=50.8 pTM=0.438 ipTM=0.173 tol=5.09
2024-07-25 16:27:32,984 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=50.4 pTM=0.438 ipTM=0.168 tol=3.45
2024-07-25 16:27:48,700 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=50.8 pTM=0.434 ipTM=0.165 tol=4.63
2024-07-25 16:28:04,401 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=50.8 pTM=0.438 ipTM=0.167 tol=3.91
2024-07-25 16:28:20,083 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=50.7 pTM=0.435 ipTM=0.162 tol=7.44
2024-07-25 16:28:35,763 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=50.6 pTM=0.438 ipTM=0.166 tol=6.11
2024-07-25 16:28:51,447 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=50.8 pTM=0.433 ipTM=0.166 tol=6.17
2024-07-25 16:29:07,126 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=50.7 pTM=0.431 ipTM=0.166 tol=4.98
2024-07-25 16:29:22,827 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=50.6 pTM=0.431 ipTM=0.169 tol=4.07
2024-07-25 16:29:38,510 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=50.5 pTM=0.438 ipTM=0.168 tol=6.74
2024-07-25 16:29:54,211 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=51 pTM=0.438 ipTM=0.176 tol=7.61
2024-07-25 16:29:54,212 alphafold2_multimer_v3_model_4_seed_000 took 486.5s (30 recycles)
2024-07-25 16:30:10,303 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=49.1 pTM=0.441 ipTM=0.266
2024-07-25 16:30:25,934 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=51.8 pTM=0.442 ipTM=0.171 tol=10.5
2024-07-25 16:30:41,575 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=52.4 pTM=0.454 ipTM=0.208 tol=13.2
2024-07-25 16:30:57,239 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=52.7 pTM=0.448 ipTM=0.174 tol=9.31
2024-07-25 16:31:12,888 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=52.6 pTM=0.448 ipTM=0.215 tol=12.6
2024-07-25 16:31:28,540 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=52.3 pTM=0.445 ipTM=0.156 tol=6.45
2024-07-25 16:31:44,194 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=52.1 pTM=0.444 ipTM=0.155 tol=11.4
2024-07-25 16:31:59,863 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=52.4 pTM=0.444 ipTM=0.156 tol=8.28
2024-07-25 16:32:15,517 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=52.6 pTM=0.444 ipTM=0.2 tol=6.71
2024-07-25 16:32:31,173 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=52.6 pTM=0.441 ipTM=0.155 tol=3.5
2024-07-25 16:32:46,835 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=52.8 pTM=0.444 ipTM=0.149 tol=3.57
2024-07-25 16:33:02,480 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=53.1 pTM=0.443 ipTM=0.149 tol=7.91
2024-07-25 16:33:18,113 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=52.9 pTM=0.442 ipTM=0.15 tol=5.65
2024-07-25 16:33:33,749 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=53 pTM=0.444 ipTM=0.148 tol=3.28
2024-07-25 16:33:49,390 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=53.3 pTM=0.443 ipTM=0.162 tol=5.39
2024-07-25 16:34:05,030 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=53.1 pTM=0.443 ipTM=0.154 tol=5.6
2024-07-25 16:34:20,673 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=53 pTM=0.446 ipTM=0.155 tol=3.8
2024-07-25 16:34:36,302 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=53.1 pTM=0.444 ipTM=0.153 tol=8.18
2024-07-25 16:34:51,933 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=53.3 pTM=0.445 ipTM=0.154 tol=3.93
2024-07-25 16:35:07,561 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=53.2 pTM=0.448 ipTM=0.186 tol=5.05
2024-07-25 16:35:23,176 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=52.9 pTM=0.445 ipTM=0.159 tol=2.79
2024-07-25 16:35:38,794 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=53.1 pTM=0.443 ipTM=0.161 tol=4.47
2024-07-25 16:35:54,411 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=52.9 pTM=0.446 ipTM=0.155 tol=3.62
2024-07-25 16:36:10,057 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=52.9 pTM=0.446 ipTM=0.151 tol=6.29
2024-07-25 16:36:25,687 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=53.2 pTM=0.443 ipTM=0.152 tol=3.26
2024-07-25 16:36:41,333 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=53 pTM=0.445 ipTM=0.15 tol=2.88
2024-07-25 16:36:56,962 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=52.8 pTM=0.445 ipTM=0.151 tol=5.8
2024-07-25 16:37:12,582 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=53 pTM=0.444 ipTM=0.15 tol=4.68
2024-07-25 16:37:28,218 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=52.6 pTM=0.444 ipTM=0.149 tol=5.28
2024-07-25 16:37:43,846 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=52.7 pTM=0.446 ipTM=0.149 tol=2.54
2024-07-25 16:37:59,477 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=52.7 pTM=0.449 ipTM=0.222 tol=7.48
2024-07-25 16:37:59,478 alphafold2_multimer_v3_model_5_seed_000 took 484.8s (30 recycles)
2024-07-25 16:37:59,943 reranking models by 'multimer' metric
2024-07-25 16:38:02,969 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-25 16:39:08,430 Relaxation took 68.5s
2024-07-25 16:39:08,430 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=55 pTM=0.435 ipTM=0.325
2024-07-25 16:40:01,158 Relaxation took 52.7s
2024-07-25 16:40:01,158 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=53.8 pTM=0.429 ipTM=0.229
2024-07-25 16:41:13,871 Relaxation took 72.7s
2024-07-25 16:41:13,872 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=52.7 pTM=0.449 ipTM=0.222
2024-07-25 16:42:07,657 Relaxation took 53.8s
2024-07-25 16:42:07,657 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=51 pTM=0.438 ipTM=0.176
2024-07-25 16:43:12,827 Relaxation took 65.2s
2024-07-25 16:43:12,827 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=52.8 pTM=0.442 ipTM=0.153
2024-07-25 16:43:14,472 Done