2024-07-25 15:50:25,740 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-25 15:50:27,015 Running on GPU 2024-07-25 15:50:30,652 Found 6 citations for tools or databases 2024-07-25 15:50:30,652 Query 1/1: AEBP2_ASB17 (length 813) 2024-07-25 15:50:37,156 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:50:43,183 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:50:49,211 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:50:55,238 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:51:01,265 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:51:07,292 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:51:13,319 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:51:19,346 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:51:25,373 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:51:31,399 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:51:37,426 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:51:43,453 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:51:49,481 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:51:55,508 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:52:01,534 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:52:09,202 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:52:15,230 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:52:21,257 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:52:27,284 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:52:33,310 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:52:39,337 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:52:45,364 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:52:51,391 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:52:57,418 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:53:03,445 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:53:09,472 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:53:15,498 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:53:21,525 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:53:27,552 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:53:33,579 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:53:39,912 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:53:45,938 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:53:51,965 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:53:57,992 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:54:04,020 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:54:10,047 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:54:16,073 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:54:22,100 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:54:28,127 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:54:34,154 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:54:40,181 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:54:46,208 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:54:52,234 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:54:58,261 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:55:04,288 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:55:06,349 Setting max_seq=508, max_extra_seq=2048 2024-07-25 15:58:07,792 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=48.5 pTM=0.423 ipTM=0.214 2024-07-25 15:58:21,163 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=49.2 pTM=0.435 ipTM=0.344 tol=8.98 2024-07-25 15:58:34,557 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=51.1 pTM=0.472 ipTM=0.525 tol=8.66 2024-07-25 15:58:48,019 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=52.3 pTM=0.49 ipTM=0.674 tol=8.41 2024-07-25 15:59:01,513 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=53.3 pTM=0.498 ipTM=0.752 tol=5.97 2024-07-25 15:59:15,023 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=53.7 pTM=0.5 ipTM=0.732 tol=3.75 2024-07-25 15:59:28,532 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=54.3 pTM=0.506 ipTM=0.781 tol=3.9 2024-07-25 15:59:42,056 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=54.8 pTM=0.508 ipTM=0.803 tol=4.33 2024-07-25 15:59:55,599 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=54.9 pTM=0.509 ipTM=0.817 tol=4.75 2024-07-25 16:00:09,159 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=55.1 pTM=0.511 ipTM=0.824 tol=2.71 2024-07-25 16:00:22,728 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=55.1 pTM=0.509 ipTM=0.827 tol=4.16 2024-07-25 16:00:36,295 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=55 pTM=0.511 ipTM=0.829 tol=5.13 2024-07-25 16:00:49,859 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=55.3 pTM=0.51 ipTM=0.829 tol=5.15 2024-07-25 16:01:03,427 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=55.5 pTM=0.512 ipTM=0.834 tol=4.12 2024-07-25 16:01:16,988 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=55.6 pTM=0.511 ipTM=0.828 tol=4.39 2024-07-25 16:01:30,560 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=55.6 pTM=0.512 ipTM=0.833 tol=3.76 2024-07-25 16:01:44,115 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=55.5 pTM=0.511 ipTM=0.833 tol=3.92 2024-07-25 16:01:57,682 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=55.4 pTM=0.511 ipTM=0.836 tol=1.66 2024-07-25 16:02:11,262 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=55.2 pTM=0.511 ipTM=0.833 tol=3.77 2024-07-25 16:02:24,820 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=55.6 pTM=0.512 ipTM=0.836 tol=3.52 2024-07-25 16:02:38,389 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=55.9 pTM=0.512 ipTM=0.84 tol=1.97 2024-07-25 16:02:51,970 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=55.6 pTM=0.512 ipTM=0.841 tol=3.65 2024-07-25 16:03:05,548 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=55.5 pTM=0.511 ipTM=0.838 tol=3.79 2024-07-25 16:03:19,117 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=55.6 pTM=0.51 ipTM=0.838 tol=2.12 2024-07-25 16:03:32,708 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=55.6 pTM=0.512 ipTM=0.836 tol=1.52 2024-07-25 16:03:46,293 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=55.7 pTM=0.512 ipTM=0.839 tol=2.76 2024-07-25 16:03:59,886 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=55.8 pTM=0.513 ipTM=0.842 tol=1.41 2024-07-25 16:04:13,478 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=55.8 pTM=0.512 ipTM=0.845 tol=4.26 2024-07-25 16:04:27,045 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=55.7 pTM=0.513 ipTM=0.843 tol=4.83 2024-07-25 16:04:40,621 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=55.6 pTM=0.512 ipTM=0.839 tol=2.19 2024-07-25 16:04:54,176 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=55.8 pTM=0.512 ipTM=0.835 tol=1.74 2024-07-25 16:04:54,177 alphafold2_multimer_v3_model_1_seed_000 took 582.7s (30 recycles) 2024-07-25 16:05:08,102 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=44 pTM=0.385 ipTM=0.28 2024-07-25 16:05:21,674 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=48.8 pTM=0.435 ipTM=0.295 tol=19 2024-07-25 16:05:35,229 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=48.9 pTM=0.429 ipTM=0.234 tol=8.59 2024-07-25 16:05:48,797 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=48.8 pTM=0.421 ipTM=0.158 tol=9.14 2024-07-25 16:06:02,352 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=49 pTM=0.421 ipTM=0.159 tol=5.2 2024-07-25 16:06:15,915 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=48.9 pTM=0.42 ipTM=0.154 tol=6.43 2024-07-25 16:06:29,500 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=48.9 pTM=0.422 ipTM=0.155 tol=3.48 2024-07-25 16:06:43,087 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=49.2 pTM=0.418 ipTM=0.156 tol=4.98 2024-07-25 16:06:56,673 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=49.2 pTM=0.42 ipTM=0.153 tol=5.84 2024-07-25 16:07:10,259 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=49.1 pTM=0.419 ipTM=0.153 tol=3.75 2024-07-25 16:07:23,859 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=49.3 pTM=0.421 ipTM=0.152 tol=3.72 2024-07-25 16:07:37,454 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=49.3 pTM=0.419 ipTM=0.157 tol=4.28 2024-07-25 16:07:51,047 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=49.5 pTM=0.418 ipTM=0.151 tol=2.77 2024-07-25 16:08:04,643 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=49 pTM=0.419 ipTM=0.156 tol=3.91 2024-07-25 16:08:18,247 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=49.4 pTM=0.417 ipTM=0.151 tol=4.34 2024-07-25 16:08:31,847 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=49.2 pTM=0.419 ipTM=0.153 tol=6.09 2024-07-25 16:08:45,446 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=49.4 pTM=0.418 ipTM=0.151 tol=4.49 2024-07-25 16:08:59,037 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=48.9 pTM=0.419 ipTM=0.15 tol=4.28 2024-07-25 16:09:12,648 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=49.1 pTM=0.419 ipTM=0.154 tol=4.34 2024-07-25 16:09:26,240 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=49.1 pTM=0.42 ipTM=0.15 tol=6.27 2024-07-25 16:09:39,838 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=49.2 pTM=0.419 ipTM=0.149 tol=11.6 2024-07-25 16:09:53,438 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=48.9 pTM=0.419 ipTM=0.151 tol=5.42 2024-07-25 16:10:07,038 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=49.1 pTM=0.419 ipTM=0.151 tol=6.48 2024-07-25 16:10:20,646 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=49 pTM=0.42 ipTM=0.15 tol=4.01 2024-07-25 16:10:34,245 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=49.1 pTM=0.42 ipTM=0.151 tol=4.8 2024-07-25 16:10:47,836 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=49.1 pTM=0.419 ipTM=0.15 tol=3.39 2024-07-25 16:11:01,434 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=48.9 pTM=0.42 ipTM=0.152 tol=5.28 2024-07-25 16:11:15,025 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=49.2 pTM=0.418 ipTM=0.15 tol=3.57 2024-07-25 16:11:28,616 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=49 pTM=0.421 ipTM=0.153 tol=3.76 2024-07-25 16:11:42,205 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=49.1 pTM=0.421 ipTM=0.154 tol=4.49 2024-07-25 16:11:55,763 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=49.3 pTM=0.418 ipTM=0.149 tol=4.86 2024-07-25 16:11:55,763 alphafold2_multimer_v3_model_2_seed_000 took 421.2s (30 recycles) 2024-07-25 16:12:09,772 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=47.8 pTM=0.412 ipTM=0.319 2024-07-25 16:12:23,392 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=49.5 pTM=0.432 ipTM=0.242 tol=10.2 2024-07-25 16:12:37,010 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=49 pTM=0.43 ipTM=0.206 tol=9.34 2024-07-25 16:12:50,640 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=48.9 pTM=0.428 ipTM=0.176 tol=7.27 2024-07-25 16:13:04,267 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=49.2 pTM=0.432 ipTM=0.19 tol=4.65 2024-07-25 16:13:17,900 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=49.8 pTM=0.437 ipTM=0.225 tol=7.86 2024-07-25 16:13:31,549 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=50 pTM=0.436 ipTM=0.23 tol=7.2 2024-07-25 16:13:45,188 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=49.9 pTM=0.437 ipTM=0.216 tol=2.96 2024-07-25 16:13:58,828 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=50.1 pTM=0.436 ipTM=0.221 tol=2.81 2024-07-25 16:14:12,455 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=49.8 pTM=0.436 ipTM=0.221 tol=2.74 2024-07-25 16:14:26,097 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=50.3 pTM=0.434 ipTM=0.251 tol=4.21 2024-07-25 16:14:39,737 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=50 pTM=0.435 ipTM=0.244 tol=4.42 2024-07-25 16:14:53,382 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=50.5 pTM=0.432 ipTM=0.23 tol=3.49 2024-07-25 16:15:07,025 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=50.3 pTM=0.437 ipTM=0.237 tol=3.68 2024-07-25 16:15:20,636 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=50.3 pTM=0.432 ipTM=0.236 tol=3 2024-07-25 16:15:34,289 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=50.2 pTM=0.437 ipTM=0.265 tol=2.74 2024-07-25 16:15:47,934 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=50.2 pTM=0.433 ipTM=0.224 tol=3.25 2024-07-25 16:16:01,577 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=50.1 pTM=0.438 ipTM=0.239 tol=2.52 2024-07-25 16:16:15,218 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=50.2 pTM=0.436 ipTM=0.255 tol=2.65 2024-07-25 16:16:28,863 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=50.2 pTM=0.436 ipTM=0.223 tol=2.54 2024-07-25 16:16:42,483 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=50.1 pTM=0.435 ipTM=0.222 tol=2.28 2024-07-25 16:16:56,122 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=50.2 pTM=0.435 ipTM=0.211 tol=2.24 2024-07-25 16:17:09,737 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=50.2 pTM=0.436 ipTM=0.227 tol=2.96 2024-07-25 16:17:23,380 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=50.4 pTM=0.438 ipTM=0.221 tol=1.93 2024-07-25 16:17:37,023 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=50.4 pTM=0.434 ipTM=0.241 tol=7.04 2024-07-25 16:17:50,653 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=50.1 pTM=0.437 ipTM=0.239 tol=6.33 2024-07-25 16:18:04,296 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=50.1 pTM=0.435 ipTM=0.23 tol=7.34 2024-07-25 16:18:17,920 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=50.1 pTM=0.435 ipTM=0.217 tol=9.98 2024-07-25 16:18:31,541 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=50 pTM=0.436 ipTM=0.221 tol=6.59 2024-07-25 16:18:45,149 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=50.4 pTM=0.436 ipTM=0.238 tol=3.86 2024-07-25 16:18:58,750 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=50.1 pTM=0.433 ipTM=0.224 tol=2.46 2024-07-25 16:18:58,751 alphafold2_multimer_v3_model_3_seed_000 took 422.6s (30 recycles) 2024-07-25 16:19:12,711 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=41.8 pTM=0.375 ipTM=0.387 2024-07-25 16:19:26,310 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=47.9 pTM=0.442 ipTM=0.288 tol=18 2024-07-25 16:19:39,910 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=47.9 pTM=0.431 ipTM=0.185 tol=10.7 2024-07-25 16:19:53,510 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=47.9 pTM=0.434 ipTM=0.183 tol=4.79 2024-07-25 16:20:07,111 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=47.9 pTM=0.431 ipTM=0.168 tol=6.13 2024-07-25 16:20:20,716 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=47.4 pTM=0.43 ipTM=0.191 tol=6.25 2024-07-25 16:20:34,280 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=48.1 pTM=0.434 ipTM=0.182 tol=7.7 2024-07-25 16:20:47,868 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=47.1 pTM=0.434 ipTM=0.184 tol=5.02 2024-07-25 16:21:01,472 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=48.2 pTM=0.43 ipTM=0.177 tol=6.3 2024-07-25 16:21:15,059 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=47.9 pTM=0.436 ipTM=0.191 tol=3.99 2024-07-25 16:21:28,647 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=48.3 pTM=0.436 ipTM=0.181 tol=5.09 2024-07-25 16:21:42,242 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=48.2 pTM=0.439 ipTM=0.196 tol=8.25 2024-07-25 16:21:55,837 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=48.8 pTM=0.436 ipTM=0.178 tol=6.53 2024-07-25 16:22:09,428 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=48.6 pTM=0.437 ipTM=0.183 tol=4.27 2024-07-25 16:22:23,020 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=48.5 pTM=0.435 ipTM=0.17 tol=4.76 2024-07-25 16:22:36,623 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=48.3 pTM=0.437 ipTM=0.182 tol=5.41 2024-07-25 16:22:50,226 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=48.4 pTM=0.433 ipTM=0.166 tol=3.83 2024-07-25 16:23:03,840 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=48.7 pTM=0.438 ipTM=0.19 tol=4.11 2024-07-25 16:23:17,421 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=48.5 pTM=0.436 ipTM=0.172 tol=4.02 2024-07-25 16:23:31,017 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=48.7 pTM=0.438 ipTM=0.182 tol=4.83 2024-07-25 16:23:44,620 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=48.3 pTM=0.438 ipTM=0.175 tol=5.34 2024-07-25 16:23:58,216 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=48.8 pTM=0.437 ipTM=0.177 tol=5.86 2024-07-25 16:24:11,810 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=48.7 pTM=0.437 ipTM=0.168 tol=5.46 2024-07-25 16:24:25,423 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=48.7 pTM=0.435 ipTM=0.178 tol=6.3 2024-07-25 16:24:38,992 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=48.7 pTM=0.435 ipTM=0.172 tol=5.81 2024-07-25 16:24:52,598 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=48.6 pTM=0.433 ipTM=0.186 tol=5.17 2024-07-25 16:25:06,196 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=48.5 pTM=0.434 ipTM=0.172 tol=6.23 2024-07-25 16:25:19,770 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=48.4 pTM=0.432 ipTM=0.179 tol=3.96 2024-07-25 16:25:33,372 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=48.5 pTM=0.432 ipTM=0.171 tol=3.2 2024-07-25 16:25:46,981 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=48 pTM=0.434 ipTM=0.181 tol=6.71 2024-07-25 16:26:00,582 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=47.3 pTM=0.434 ipTM=0.164 tol=8.01 2024-07-25 16:26:00,583 alphafold2_multimer_v3_model_4_seed_000 took 421.4s (30 recycles) 2024-07-25 16:26:14,566 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=42.5 pTM=0.393 ipTM=0.447 2024-07-25 16:26:28,196 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=49.3 pTM=0.438 ipTM=0.479 tol=14.5 2024-07-25 16:26:41,843 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=50.5 pTM=0.443 ipTM=0.543 tol=13 2024-07-25 16:26:55,485 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=50.2 pTM=0.44 ipTM=0.481 tol=6.97 2024-07-25 16:27:09,123 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=50.8 pTM=0.439 ipTM=0.429 tol=6.2 2024-07-25 16:27:22,770 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=51 pTM=0.441 ipTM=0.42 tol=5.88 2024-07-25 16:27:36,411 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=50.8 pTM=0.442 ipTM=0.41 tol=4.23 2024-07-25 16:27:50,043 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=50.9 pTM=0.443 ipTM=0.326 tol=4.68 2024-07-25 16:28:03,643 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=51.2 pTM=0.445 ipTM=0.332 tol=2.32 2024-07-25 16:28:17,276 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=51.2 pTM=0.442 ipTM=0.35 tol=2.04 2024-07-25 16:28:30,918 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=51.1 pTM=0.445 ipTM=0.427 tol=4.53 2024-07-25 16:28:44,554 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=50.8 pTM=0.441 ipTM=0.407 tol=3.09 2024-07-25 16:28:58,197 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=51.2 pTM=0.442 ipTM=0.356 tol=4.36 2024-07-25 16:29:11,836 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=51.8 pTM=0.446 ipTM=0.377 tol=4.08 2024-07-25 16:29:25,478 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=51.4 pTM=0.44 ipTM=0.389 tol=4.48 2024-07-25 16:29:39,113 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=51.1 pTM=0.441 ipTM=0.32 tol=2.33 2024-07-25 16:29:52,772 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=50.7 pTM=0.437 ipTM=0.248 tol=4.06 2024-07-25 16:30:06,423 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=50.6 pTM=0.438 ipTM=0.225 tol=3.06 2024-07-25 16:30:20,070 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=50.4 pTM=0.434 ipTM=0.211 tol=4.76 2024-07-25 16:30:33,713 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=50.7 pTM=0.435 ipTM=0.195 tol=2.8 2024-07-25 16:30:47,356 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=50 pTM=0.438 ipTM=0.188 tol=3.17 2024-07-25 16:31:01,007 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=50.4 pTM=0.431 ipTM=0.171 tol=3.51 2024-07-25 16:31:14,651 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=50 pTM=0.437 ipTM=0.172 tol=2.62 2024-07-25 16:31:28,283 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=50.6 pTM=0.433 ipTM=0.169 tol=3.62 2024-07-25 16:31:41,939 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=50.4 pTM=0.436 ipTM=0.183 tol=2.45 2024-07-25 16:31:55,575 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=50.4 pTM=0.432 ipTM=0.171 tol=3.36 2024-07-25 16:32:09,232 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=50.3 pTM=0.435 ipTM=0.182 tol=2.53 2024-07-25 16:32:22,862 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=50.3 pTM=0.432 ipTM=0.17 tol=1.84 2024-07-25 16:32:36,522 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=50.2 pTM=0.435 ipTM=0.184 tol=2.43 2024-07-25 16:32:50,157 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=50.4 pTM=0.436 ipTM=0.184 tol=3.89 2024-07-25 16:33:03,807 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=50.1 pTM=0.434 ipTM=0.185 tol=3.1 2024-07-25 16:33:03,807 alphafold2_multimer_v3_model_5_seed_000 took 422.8s (30 recycles) 2024-07-25 16:33:04,229 reranking models by 'multimer' metric 2024-07-25 16:33:05,277 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-25 16:34:33,873 Relaxation took 89.6s 2024-07-25 16:34:33,873 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=55.8 pTM=0.512 ipTM=0.835 2024-07-25 16:35:42,017 Relaxation took 68.1s 2024-07-25 16:35:42,017 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=50.1 pTM=0.433 ipTM=0.224 2024-07-25 16:36:43,721 Relaxation took 61.7s 2024-07-25 16:36:43,722 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=50.1 pTM=0.434 ipTM=0.185 2024-07-25 16:38:11,090 Relaxation took 87.4s 2024-07-25 16:38:11,090 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=47.3 pTM=0.434 ipTM=0.164 2024-07-25 16:39:15,995 Relaxation took 64.9s 2024-07-25 16:39:15,996 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=49.3 pTM=0.418 ipTM=0.149 2024-07-25 16:39:17,461 Done