2024-07-25 15:50:25,739 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-25 15:50:27,127 Running on GPU
2024-07-25 15:50:30,650 Found 6 citations for tools or databases
2024-07-25 15:50:30,650 Query 1/1: AEBP2_FBXL19 (length 1212)
2024-07-25 15:50:37,198 Timeout while fetching result from MSA server. Retrying...
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2024-07-25 15:53:40,172 Timeout while fetching result from MSA server. Retrying...
2024-07-25 15:53:46,199 Timeout while fetching result from MSA server. Retrying...
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2024-07-25 15:55:04,549 Timeout while fetching result from MSA server. Retrying...
2024-07-25 15:55:08,032 Setting max_seq=508, max_extra_seq=2048
2024-07-25 15:57:51,828 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=43.3 pTM=0.368 ipTM=0.216
2024-07-25 15:58:27,179 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=44.6 pTM=0.367 ipTM=0.215 tol=13.9
2024-07-25 15:59:02,640 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=44.5 pTM=0.36 ipTM=0.202 tol=10.6
2024-07-25 15:59:38,178 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=44.6 pTM=0.359 ipTM=0.201 tol=7.73
2024-07-25 16:00:13,767 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=44.8 pTM=0.362 ipTM=0.205 tol=6.94
2024-07-25 16:00:49,391 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=44.7 pTM=0.357 ipTM=0.199 tol=4.74
2024-07-25 16:01:25,053 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=45 pTM=0.357 ipTM=0.198 tol=4.57
2024-07-25 16:02:00,712 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=45.6 pTM=0.361 ipTM=0.204 tol=3.3
2024-07-25 16:02:36,343 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=45.8 pTM=0.359 ipTM=0.207 tol=3.14
2024-07-25 16:03:12,003 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=46.2 pTM=0.359 ipTM=0.202 tol=9.34
2024-07-25 16:03:47,702 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=46.4 pTM=0.361 ipTM=0.204 tol=7.09
2024-07-25 16:04:23,412 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=46.6 pTM=0.364 ipTM=0.222 tol=3.81
2024-07-25 16:04:59,144 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=46.6 pTM=0.362 ipTM=0.206 tol=2.45
2024-07-25 16:05:34,854 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=46.3 pTM=0.363 ipTM=0.21 tol=7.52
2024-07-25 16:06:10,555 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=46.4 pTM=0.362 ipTM=0.206 tol=3.24
2024-07-25 16:06:46,241 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=46.3 pTM=0.364 ipTM=0.209 tol=7.25
2024-07-25 16:07:21,932 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=46.6 pTM=0.363 ipTM=0.207 tol=2.32
2024-07-25 16:07:57,625 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=46.4 pTM=0.361 ipTM=0.204 tol=1.89
2024-07-25 16:08:33,298 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=46.1 pTM=0.36 ipTM=0.204 tol=1.61
2024-07-25 16:09:09,019 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=46.3 pTM=0.361 ipTM=0.204 tol=5.19
2024-07-25 16:09:44,716 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=45.9 pTM=0.362 ipTM=0.206 tol=3.17
2024-07-25 16:10:20,424 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=46.1 pTM=0.361 ipTM=0.21 tol=1.87
2024-07-25 16:10:56,136 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=46.3 pTM=0.362 ipTM=0.208 tol=1.6
2024-07-25 16:11:31,845 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=46.4 pTM=0.362 ipTM=0.206 tol=1.71
2024-07-25 16:12:07,535 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=46.1 pTM=0.362 ipTM=0.208 tol=1.5
2024-07-25 16:12:43,241 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=46.3 pTM=0.363 ipTM=0.221 tol=1.59
2024-07-25 16:13:18,944 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=46.4 pTM=0.362 ipTM=0.208 tol=4.73
2024-07-25 16:13:54,651 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=46.2 pTM=0.36 ipTM=0.204 tol=1.51
2024-07-25 16:14:30,361 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=46.4 pTM=0.363 ipTM=0.209 tol=4.31
2024-07-25 16:15:06,061 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=46.3 pTM=0.362 ipTM=0.208 tol=2.01
2024-07-25 16:15:41,788 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=46.3 pTM=0.361 ipTM=0.204 tol=4.71
2024-07-25 16:15:41,789 alphafold2_multimer_v3_model_1_seed_000 took 1229.9s (30 recycles)
2024-07-25 16:16:18,352 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=44.7 pTM=0.35 ipTM=0.174
2024-07-25 16:16:54,045 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=46.6 pTM=0.349 ipTM=0.177 tol=11.9
2024-07-25 16:17:29,758 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=46.4 pTM=0.345 ipTM=0.175 tol=6.75
2024-07-25 16:18:05,493 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=47.8 pTM=0.346 ipTM=0.179 tol=8.86
2024-07-25 16:18:41,254 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=47.7 pTM=0.349 ipTM=0.196 tol=6.2
2024-07-25 16:19:17,000 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=48 pTM=0.347 ipTM=0.191 tol=5.14
2024-07-25 16:19:52,741 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=48.2 pTM=0.346 ipTM=0.184 tol=8.54
2024-07-25 16:20:28,489 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=48.2 pTM=0.345 ipTM=0.18 tol=4.54
2024-07-25 16:21:04,248 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=48.1 pTM=0.344 ipTM=0.172 tol=6.43
2024-07-25 16:21:40,001 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=47.8 pTM=0.344 ipTM=0.166 tol=4.75
2024-07-25 16:22:15,750 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=47.8 pTM=0.343 ipTM=0.164 tol=4.26
2024-07-25 16:22:51,492 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=47.9 pTM=0.345 ipTM=0.167 tol=4.16
2024-07-25 16:23:27,222 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=47.8 pTM=0.344 ipTM=0.167 tol=2.94
2024-07-25 16:24:02,992 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=47.9 pTM=0.344 ipTM=0.17 tol=3.96
2024-07-25 16:24:38,727 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=48.1 pTM=0.344 ipTM=0.171 tol=3.2
2024-07-25 16:25:14,450 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=47.9 pTM=0.344 ipTM=0.18 tol=5.76
2024-07-25 16:25:50,190 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=47.8 pTM=0.343 ipTM=0.17 tol=8.91
2024-07-25 16:26:25,936 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=48 pTM=0.34 ipTM=0.16 tol=8.84
2024-07-25 16:27:01,683 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=47.9 pTM=0.341 ipTM=0.163 tol=2.58
2024-07-25 16:27:37,437 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=48 pTM=0.342 ipTM=0.164 tol=3
2024-07-25 16:28:13,155 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=48 pTM=0.341 ipTM=0.161 tol=3.97
2024-07-25 16:28:48,886 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=48 pTM=0.34 ipTM=0.159 tol=4.77
2024-07-25 16:29:24,611 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=48.2 pTM=0.341 ipTM=0.161 tol=2.83
2024-07-25 16:30:00,345 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=48.2 pTM=0.343 ipTM=0.164 tol=2.37
2024-07-25 16:30:36,096 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=48.2 pTM=0.342 ipTM=0.163 tol=2.3
2024-07-25 16:31:11,861 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=48.2 pTM=0.342 ipTM=0.163 tol=2.14
2024-07-25 16:31:47,629 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=48.4 pTM=0.344 ipTM=0.168 tol=1.74
2024-07-25 16:32:23,417 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=48.3 pTM=0.342 ipTM=0.165 tol=2.4
2024-07-25 16:32:59,196 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=48.3 pTM=0.344 ipTM=0.168 tol=2.33
2024-07-25 16:33:34,989 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=48.3 pTM=0.344 ipTM=0.167 tol=2.53
2024-07-25 16:34:10,777 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=48.2 pTM=0.343 ipTM=0.163 tol=2.22
2024-07-25 16:34:10,778 alphafold2_multimer_v3_model_2_seed_000 took 1108.1s (30 recycles)
2024-07-25 16:34:47,631 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=45.3 pTM=0.344 ipTM=0.168
2024-07-25 16:35:23,570 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=46.3 pTM=0.346 ipTM=0.167 tol=10.3
2024-07-25 16:35:59,486 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=47.8 pTM=0.351 ipTM=0.176 tol=9.48
2024-07-25 16:36:35,451 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=47.8 pTM=0.346 ipTM=0.176 tol=5.04
2024-07-25 16:37:11,406 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=48 pTM=0.35 ipTM=0.186 tol=4.39
2024-07-25 16:37:47,349 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=48.5 pTM=0.351 ipTM=0.207 tol=5.12
2024-07-25 16:38:23,293 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=48.8 pTM=0.353 ipTM=0.228 tol=4.41
2024-07-25 16:38:59,239 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=49.1 pTM=0.356 ipTM=0.24 tol=3.63
2024-07-25 16:39:35,210 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=49.1 pTM=0.358 ipTM=0.253 tol=4.43
2024-07-25 16:40:11,173 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=49.2 pTM=0.36 ipTM=0.264 tol=2.77
2024-07-25 16:40:47,118 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=49.2 pTM=0.361 ipTM=0.286 tol=2.36
2024-07-25 16:41:23,057 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=49.8 pTM=0.367 ipTM=0.307 tol=2.46
2024-07-25 16:41:58,977 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=49.8 pTM=0.365 ipTM=0.31 tol=2.53
2024-07-25 16:42:34,932 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=49.8 pTM=0.366 ipTM=0.315 tol=2.05
2024-07-25 16:43:10,863 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=50 pTM=0.367 ipTM=0.326 tol=2.87
2024-07-25 16:43:46,789 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=50.2 pTM=0.371 ipTM=0.336 tol=7.66
2024-07-25 16:44:22,691 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=50.2 pTM=0.369 ipTM=0.336 tol=3.13
2024-07-25 16:44:58,564 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=50.1 pTM=0.37 ipTM=0.34 tol=3.17
2024-07-25 16:45:34,433 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=50 pTM=0.369 ipTM=0.341 tol=1.97
2024-07-25 16:46:10,321 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=50.3 pTM=0.373 ipTM=0.348 tol=2.1
2024-07-25 16:46:46,230 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=50.2 pTM=0.372 ipTM=0.348 tol=2.21
2024-07-25 16:47:22,113 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=50.7 pTM=0.375 ipTM=0.354 tol=1.88
2024-07-25 16:47:57,977 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=50.6 pTM=0.374 ipTM=0.353 tol=2.22
2024-07-25 16:48:33,841 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=50.8 pTM=0.376 ipTM=0.356 tol=2.08
2024-07-25 16:49:09,690 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=50.6 pTM=0.374 ipTM=0.352 tol=1.91
2024-07-25 16:49:45,563 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=50.6 pTM=0.376 ipTM=0.353 tol=2.56
2024-07-25 16:50:21,425 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=50.8 pTM=0.376 ipTM=0.35 tol=2.53
2024-07-25 16:50:57,296 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=50.7 pTM=0.375 ipTM=0.349 tol=1.8
2024-07-25 16:51:33,153 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=50.8 pTM=0.378 ipTM=0.353 tol=2.21
2024-07-25 16:52:09,002 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=50.9 pTM=0.38 ipTM=0.357 tol=4.07
2024-07-25 16:52:44,846 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=50.9 pTM=0.38 ipTM=0.354 tol=2.88
2024-07-25 16:52:44,847 alphafold2_multimer_v3_model_3_seed_000 took 1113.2s (30 recycles)
2024-07-25 16:53:21,576 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=43.2 pTM=0.352 ipTM=0.191
2024-07-25 16:53:57,376 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=43.2 pTM=0.348 ipTM=0.165 tol=21.9
2024-07-25 16:54:33,249 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=45.2 pTM=0.34 ipTM=0.156 tol=14.9
2024-07-25 16:55:09,162 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=45.5 pTM=0.341 ipTM=0.159 tol=10.6
2024-07-25 16:55:45,044 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=45.9 pTM=0.342 ipTM=0.161 tol=5.2
2024-07-25 16:56:20,931 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=46.5 pTM=0.339 ipTM=0.157 tol=6.25
2024-07-25 16:56:56,819 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=46.9 pTM=0.34 ipTM=0.156 tol=8.94
2024-07-25 16:57:32,710 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=46.9 pTM=0.338 ipTM=0.153 tol=6.83
2024-07-25 16:58:08,584 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=46.8 pTM=0.34 ipTM=0.155 tol=5.07
2024-07-25 16:58:44,459 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=46.6 pTM=0.34 ipTM=0.156 tol=6.8
2024-07-25 16:59:20,333 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=46.9 pTM=0.34 ipTM=0.158 tol=6.94
2024-07-25 16:59:56,205 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=46.9 pTM=0.339 ipTM=0.159 tol=7.21
2024-07-25 17:00:32,082 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=46.9 pTM=0.339 ipTM=0.158 tol=3.25
2024-07-25 17:01:07,986 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=46.7 pTM=0.339 ipTM=0.16 tol=7.8
2024-07-25 17:01:43,902 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=46.8 pTM=0.339 ipTM=0.158 tol=7.49
2024-07-25 17:02:19,804 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=46.9 pTM=0.342 ipTM=0.161 tol=4.51
2024-07-25 17:02:55,696 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=46.8 pTM=0.341 ipTM=0.16 tol=9.39
2024-07-25 17:03:31,600 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=46.6 pTM=0.338 ipTM=0.158 tol=3.34
2024-07-25 17:04:07,497 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=46.4 pTM=0.339 ipTM=0.159 tol=8.02
2024-07-25 17:04:43,424 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=46.8 pTM=0.339 ipTM=0.169 tol=3.61
2024-07-25 17:05:19,307 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=46.7 pTM=0.34 ipTM=0.182 tol=4.29
2024-07-25 17:05:55,189 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=46.9 pTM=0.338 ipTM=0.173 tol=5.51
2024-07-25 17:06:31,078 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=46.9 pTM=0.339 ipTM=0.177 tol=9.77
2024-07-25 17:07:06,992 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=47.1 pTM=0.338 ipTM=0.173 tol=4.36
2024-07-25 17:07:42,873 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=46.9 pTM=0.338 ipTM=0.166 tol=2.98
2024-07-25 17:08:18,752 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=46.9 pTM=0.339 ipTM=0.174 tol=9.69
2024-07-25 17:08:54,640 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=47 pTM=0.339 ipTM=0.173 tol=9.57
2024-07-25 17:09:30,517 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=46.8 pTM=0.337 ipTM=0.173 tol=4.33
2024-07-25 17:10:06,418 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=46.9 pTM=0.339 ipTM=0.169 tol=2.75
2024-07-25 17:10:42,306 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=46.7 pTM=0.339 ipTM=0.168 tol=8.77
2024-07-25 17:11:18,196 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=46.7 pTM=0.337 ipTM=0.162 tol=5.12
2024-07-25 17:11:18,197 alphafold2_multimer_v3_model_4_seed_000 took 1112.5s (30 recycles)
2024-07-25 17:11:55,003 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=44.3 pTM=0.352 ipTM=0.18
2024-07-25 17:12:30,949 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=45 pTM=0.348 ipTM=0.174 tol=13.5
2024-07-25 17:13:06,936 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=45.2 pTM=0.343 ipTM=0.155 tol=12.7
2024-07-25 17:13:42,896 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=46.2 pTM=0.342 ipTM=0.155 tol=7.53
2024-07-25 17:14:18,866 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=47.6 pTM=0.341 ipTM=0.152 tol=5.92
2024-07-25 17:14:54,849 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=47.8 pTM=0.339 ipTM=0.153 tol=6.76
2024-07-25 17:15:30,856 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=48.1 pTM=0.339 ipTM=0.151 tol=6.22
2024-07-25 17:16:06,866 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=47.9 pTM=0.338 ipTM=0.151 tol=7.05
2024-07-25 17:16:42,866 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=47.8 pTM=0.339 ipTM=0.151 tol=7.23
2024-07-25 17:17:18,866 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=47.8 pTM=0.338 ipTM=0.152 tol=3.58
2024-07-25 17:17:54,928 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=47.9 pTM=0.34 ipTM=0.156 tol=7.02
2024-07-25 17:18:30,938 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=48 pTM=0.338 ipTM=0.154 tol=3.25
2024-07-25 17:19:06,947 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=48 pTM=0.338 ipTM=0.155 tol=7.55
2024-07-25 17:19:42,959 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=48 pTM=0.338 ipTM=0.153 tol=4.24
2024-07-25 17:20:18,983 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=47.9 pTM=0.337 ipTM=0.155 tol=3.16
2024-07-25 17:20:54,988 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=48.1 pTM=0.339 ipTM=0.158 tol=6.48
2024-07-25 17:21:30,994 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=48.2 pTM=0.34 ipTM=0.156 tol=3.94
2024-07-25 17:22:06,969 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=48.1 pTM=0.34 ipTM=0.156 tol=7.17
2024-07-25 17:22:42,927 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=48.1 pTM=0.339 ipTM=0.154 tol=6.7
2024-07-25 17:23:18,906 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=48.5 pTM=0.342 ipTM=0.165 tol=7.1
2024-07-25 17:23:54,887 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=48.2 pTM=0.348 ipTM=0.252 tol=6.05
2024-07-25 17:24:30,855 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=48.8 pTM=0.349 ipTM=0.289 tol=8.05
2024-07-25 17:25:06,803 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=48.7 pTM=0.35 ipTM=0.301 tol=7.32
2024-07-25 17:25:42,764 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=48.9 pTM=0.35 ipTM=0.292 tol=5.39
2024-07-25 17:26:18,713 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=48.8 pTM=0.353 ipTM=0.307 tol=6.63
2024-07-25 17:26:54,649 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=48.9 pTM=0.356 ipTM=0.31 tol=5.21
2024-07-25 17:27:30,595 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=49.2 pTM=0.357 ipTM=0.307 tol=3.3
2024-07-25 17:28:06,517 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=49.1 pTM=0.359 ipTM=0.319 tol=3.61
2024-07-25 17:28:42,439 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=49.3 pTM=0.36 ipTM=0.321 tol=2.44
2024-07-25 17:29:18,342 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=49.1 pTM=0.36 ipTM=0.313 tol=7.92
2024-07-25 17:29:54,241 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=49.2 pTM=0.361 ipTM=0.327 tol=9.42
2024-07-25 17:29:54,242 alphafold2_multimer_v3_model_5_seed_000 took 1115.2s (30 recycles)
2024-07-25 17:29:55,131 reranking models by 'multimer' metric
2024-07-25 17:29:58,544 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-25 17:32:05,314 Relaxation took 130.2s
2024-07-25 17:32:05,314 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=50.9 pTM=0.38 ipTM=0.354
2024-07-25 17:34:18,307 Relaxation took 133.0s
2024-07-25 17:34:18,307 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=49.2 pTM=0.361 ipTM=0.327
2024-07-25 17:36:13,329 Relaxation took 115.0s
2024-07-25 17:36:13,329 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=46.3 pTM=0.361 ipTM=0.204
2024-07-25 17:38:47,738 Relaxation took 154.4s
2024-07-25 17:38:47,738 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=48.2 pTM=0.343 ipTM=0.163
2024-07-25 17:41:33,204 Relaxation took 165.5s
2024-07-25 17:41:33,204 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=46.7 pTM=0.337 ipTM=0.162
2024-07-25 17:41:35,636 Done