2024-07-25 15:50:25,740 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-25 15:50:27,059 Running on GPU 2024-07-25 15:50:30,651 Found 6 citations for tools or databases 2024-07-25 15:50:30,652 Query 1/1: AJUBA_ARIH1 (length 1095) 2024-07-25 15:50:37,180 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:50:43,207 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:50:49,235 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:50:55,262 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:51:01,289 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:51:07,316 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:51:13,343 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:51:19,367 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:51:25,394 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:51:31,421 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:51:37,447 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:51:43,474 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:51:49,502 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:51:55,529 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:52:01,553 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:52:09,325 Timeout while submitting to MSA server. Retrying... 2024-07-25 15:52:15,352 Timeout while submitting to MSA server. Retrying... 2024-07-25 15:52:21,380 Timeout while submitting to MSA server. Retrying... 2024-07-25 15:52:27,407 Timeout while submitting to MSA server. Retrying... 2024-07-25 15:52:33,434 Timeout while submitting to MSA server. Retrying... 2024-07-25 15:52:39,456 Timeout while submitting to MSA server. Retrying... 2024-07-25 15:52:45,483 Timeout while submitting to MSA server. Retrying... 2024-07-25 15:52:51,510 Timeout while submitting to MSA server. Retrying... 2024-07-25 15:52:57,537 Timeout while submitting to MSA server. Retrying... 2024-07-25 15:53:03,564 Timeout while submitting to MSA server. Retrying... 2024-07-25 15:53:09,591 Timeout while submitting to MSA server. Retrying... 2024-07-25 15:53:15,618 Timeout while submitting to MSA server. Retrying... 2024-07-25 15:53:21,645 Timeout while submitting to MSA server. Retrying... 2024-07-25 15:53:27,672 Timeout while submitting to MSA server. Retrying... 2024-07-25 15:53:33,699 Timeout while submitting to MSA server. Retrying... 2024-07-25 15:53:40,150 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:53:46,172 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:53:52,199 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:53:58,227 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:54:04,253 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:54:10,280 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:54:16,307 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:54:22,334 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:54:28,361 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:54:34,388 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:54:40,415 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:54:46,442 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:54:52,468 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:54:58,494 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:55:04,521 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:55:08,636 Setting max_seq=508, max_extra_seq=2048 2024-07-25 15:58:13,140 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=48.2 pTM=0.383 ipTM=0.265 2024-07-25 15:58:39,761 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=48.6 pTM=0.388 ipTM=0.191 tol=11.9 2024-07-25 15:59:06,601 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=48.5 pTM=0.376 ipTM=0.169 tol=10.9 2024-07-25 15:59:33,480 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=48.5 pTM=0.376 ipTM=0.174 tol=8.36 2024-07-25 16:00:00,410 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=48.8 pTM=0.377 ipTM=0.145 tol=4.38 2024-07-25 16:00:27,326 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=49.1 pTM=0.38 ipTM=0.155 tol=7.78 2024-07-25 16:00:54,281 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=49.2 pTM=0.377 ipTM=0.151 tol=12.9 2024-07-25 16:01:21,214 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=48.9 pTM=0.379 ipTM=0.161 tol=6.59 2024-07-25 16:01:48,165 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=48.7 pTM=0.375 ipTM=0.149 tol=5.98 2024-07-25 16:02:15,090 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=50.8 pTM=0.401 ipTM=0.299 tol=17 2024-07-25 16:02:42,016 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=51.2 pTM=0.409 ipTM=0.348 tol=6.97 2024-07-25 16:03:08,977 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=50.6 pTM=0.403 ipTM=0.282 tol=8.38 2024-07-25 16:03:35,973 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=50.6 pTM=0.397 ipTM=0.259 tol=3.41 2024-07-25 16:04:02,975 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=49.5 pTM=0.383 ipTM=0.186 tol=3.8 2024-07-25 16:04:29,950 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=49 pTM=0.377 ipTM=0.151 tol=5.68 2024-07-25 16:04:56,920 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=48.4 pTM=0.373 ipTM=0.185 tol=12.5 2024-07-25 16:05:23,887 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=48.5 pTM=0.377 ipTM=0.155 tol=8.73 2024-07-25 16:05:50,837 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=49 pTM=0.384 ipTM=0.167 tol=6.04 2024-07-25 16:06:17,753 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=48.5 pTM=0.38 ipTM=0.165 tol=8.66 2024-07-25 16:06:44,668 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=49 pTM=0.383 ipTM=0.158 tol=4.15 2024-07-25 16:07:11,587 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=48.8 pTM=0.382 ipTM=0.156 tol=2.93 2024-07-25 16:07:38,508 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=49.1 pTM=0.383 ipTM=0.16 tol=3.87 2024-07-25 16:08:05,409 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=49 pTM=0.383 ipTM=0.156 tol=4.61 2024-07-25 16:08:32,324 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=49.4 pTM=0.384 ipTM=0.162 tol=3.83 2024-07-25 16:08:59,270 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=49.5 pTM=0.386 ipTM=0.158 tol=4.1 2024-07-25 16:09:26,235 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=49.4 pTM=0.383 ipTM=0.157 tol=4.89 2024-07-25 16:09:53,206 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=49.5 pTM=0.383 ipTM=0.159 tol=4.77 2024-07-25 16:10:20,197 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=49.5 pTM=0.384 ipTM=0.154 tol=3.27 2024-07-25 16:10:47,162 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=49.8 pTM=0.386 ipTM=0.165 tol=3.13 2024-07-25 16:11:14,121 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=49.6 pTM=0.385 ipTM=0.16 tol=4.27 2024-07-25 16:11:41,085 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=49.6 pTM=0.385 ipTM=0.16 tol=4.04 2024-07-25 16:11:41,086 alphafold2_multimer_v3_model_1_seed_000 took 988.7s (30 recycles) 2024-07-25 16:12:08,704 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=48.3 pTM=0.382 ipTM=0.199 2024-07-25 16:12:35,667 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=48.9 pTM=0.385 ipTM=0.196 tol=18 2024-07-25 16:13:02,695 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=48 pTM=0.377 ipTM=0.225 tol=22.4 2024-07-25 16:13:29,800 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=48.6 pTM=0.372 ipTM=0.136 tol=24.6 2024-07-25 16:13:56,897 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=49.9 pTM=0.38 ipTM=0.135 tol=13.2 2024-07-25 16:14:23,991 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=50.3 pTM=0.381 ipTM=0.14 tol=12.1 2024-07-25 16:14:51,100 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=49.3 pTM=0.372 ipTM=0.137 tol=16.2 2024-07-25 16:15:18,192 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=49.9 pTM=0.383 ipTM=0.141 tol=12.4 2024-07-25 16:15:45,344 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=49.6 pTM=0.375 ipTM=0.141 tol=18.3 2024-07-25 16:16:12,412 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=50.1 pTM=0.378 ipTM=0.14 tol=15.7 2024-07-25 16:16:39,468 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=50.3 pTM=0.378 ipTM=0.141 tol=7.14 2024-07-25 16:17:06,529 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=50.8 pTM=0.378 ipTM=0.142 tol=4.71 2024-07-25 16:17:33,608 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=50.3 pTM=0.373 ipTM=0.141 tol=3.8 2024-07-25 16:18:00,685 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=50.3 pTM=0.374 ipTM=0.141 tol=4.89 2024-07-25 16:18:27,760 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=49.9 pTM=0.369 ipTM=0.138 tol=2.88 2024-07-25 16:18:54,808 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=49.8 pTM=0.366 ipTM=0.136 tol=4.21 2024-07-25 16:19:21,891 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=50 pTM=0.367 ipTM=0.138 tol=3.71 2024-07-25 16:19:48,951 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=49.8 pTM=0.368 ipTM=0.138 tol=3.89 2024-07-25 16:20:16,025 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=49.2 pTM=0.369 ipTM=0.138 tol=11.7 2024-07-25 16:20:43,059 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=49.8 pTM=0.376 ipTM=0.137 tol=11.2 2024-07-25 16:21:10,111 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=49.6 pTM=0.368 ipTM=0.139 tol=7.09 2024-07-25 16:21:37,160 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=50.1 pTM=0.374 ipTM=0.139 tol=6.5 2024-07-25 16:22:04,215 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=50 pTM=0.374 ipTM=0.14 tol=5.29 2024-07-25 16:22:31,271 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=50.1 pTM=0.379 ipTM=0.143 tol=4.39 2024-07-25 16:22:58,345 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=50.3 pTM=0.38 ipTM=0.141 tol=3.48 2024-07-25 16:23:25,401 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=50.1 pTM=0.377 ipTM=0.141 tol=4.51 2024-07-25 16:23:52,420 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=50 pTM=0.374 ipTM=0.146 tol=2.99 2024-07-25 16:24:19,483 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=49.4 pTM=0.372 ipTM=0.143 tol=13.1 2024-07-25 16:24:46,545 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=50 pTM=0.379 ipTM=0.14 tol=12.9 2024-07-25 16:25:13,591 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=49.6 pTM=0.386 ipTM=0.201 tol=25.1 2024-07-25 16:25:40,670 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=50 pTM=0.376 ipTM=0.138 tol=23.3 2024-07-25 16:25:40,671 alphafold2_multimer_v3_model_2_seed_000 took 838.9s (30 recycles) 2024-07-25 16:26:08,470 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=49 pTM=0.378 ipTM=0.226 2024-07-25 16:26:35,552 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=49.3 pTM=0.393 ipTM=0.221 tol=10.2 2024-07-25 16:27:02,648 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=49.5 pTM=0.395 ipTM=0.156 tol=8.77 2024-07-25 16:27:29,779 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=48.8 pTM=0.38 ipTM=0.145 tol=9.67 2024-07-25 16:27:56,852 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=49.4 pTM=0.394 ipTM=0.16 tol=5.94 2024-07-25 16:28:23,894 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=50.5 pTM=0.406 ipTM=0.164 tol=5.05 2024-07-25 16:28:50,964 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=50.2 pTM=0.393 ipTM=0.153 tol=8.43 2024-07-25 16:29:18,026 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=50.6 pTM=0.403 ipTM=0.188 tol=5.46 2024-07-25 16:29:45,110 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=51.4 pTM=0.406 ipTM=0.192 tol=22.4 2024-07-25 16:30:12,155 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=52.5 pTM=0.422 ipTM=0.2 tol=8.3 2024-07-25 16:30:39,206 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=52.2 pTM=0.418 ipTM=0.202 tol=5.98 2024-07-25 16:31:06,234 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=52.9 pTM=0.424 ipTM=0.221 tol=6.11 2024-07-25 16:31:33,324 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=52.5 pTM=0.425 ipTM=0.24 tol=4.94 2024-07-25 16:32:00,464 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=52.4 pTM=0.419 ipTM=0.237 tol=12.1 2024-07-25 16:32:27,550 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=52.2 pTM=0.42 ipTM=0.248 tol=12.4 2024-07-25 16:32:54,625 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=53 pTM=0.428 ipTM=0.263 tol=9.36 2024-07-25 16:33:21,737 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=53.2 pTM=0.429 ipTM=0.269 tol=4.7 2024-07-25 16:33:48,837 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=53.4 pTM=0.43 ipTM=0.291 tol=3.78 2024-07-25 16:34:15,937 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=52.9 pTM=0.428 ipTM=0.291 tol=6.22 2024-07-25 16:34:42,983 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=53.1 pTM=0.428 ipTM=0.302 tol=6.25 2024-07-25 16:35:10,051 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=53 pTM=0.425 ipTM=0.297 tol=2.51 2024-07-25 16:35:37,102 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=53.2 pTM=0.428 ipTM=0.311 tol=2.76 2024-07-25 16:36:04,175 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=53.2 pTM=0.43 ipTM=0.312 tol=2.51 2024-07-25 16:36:31,244 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=53.2 pTM=0.428 ipTM=0.299 tol=4.37 2024-07-25 16:36:58,297 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=53.1 pTM=0.43 ipTM=0.313 tol=3.45 2024-07-25 16:37:25,345 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=53.4 pTM=0.431 ipTM=0.323 tol=3.37 2024-07-25 16:37:52,379 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=52.7 pTM=0.423 ipTM=0.325 tol=3.09 2024-07-25 16:38:19,421 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=53.1 pTM=0.427 ipTM=0.335 tol=2.81 2024-07-25 16:38:46,437 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=53.1 pTM=0.43 ipTM=0.326 tol=6.47 2024-07-25 16:39:13,454 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=53.2 pTM=0.429 ipTM=0.32 tol=4.29 2024-07-25 16:39:40,461 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=52.9 pTM=0.427 ipTM=0.314 tol=5.62 2024-07-25 16:39:40,462 alphafold2_multimer_v3_model_3_seed_000 took 839.1s (30 recycles) 2024-07-25 16:40:08,272 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=48.7 pTM=0.387 ipTM=0.146 2024-07-25 16:40:35,281 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=48.4 pTM=0.402 ipTM=0.223 tol=19.5 2024-07-25 16:41:02,369 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=49.6 pTM=0.413 ipTM=0.21 tol=19.3 2024-07-25 16:41:29,460 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=50.2 pTM=0.411 ipTM=0.213 tol=9.64 2024-07-25 16:41:56,542 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=49.5 pTM=0.402 ipTM=0.224 tol=7.34 2024-07-25 16:42:23,526 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=50.2 pTM=0.45 ipTM=0.432 tol=18.1 2024-07-25 16:42:50,664 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=50.2 pTM=0.406 ipTM=0.22 tol=12.9 2024-07-25 16:43:17,752 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=49.2 pTM=0.405 ipTM=0.235 tol=7.4 2024-07-25 16:43:44,873 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=49.5 pTM=0.403 ipTM=0.228 tol=14.1 2024-07-25 16:44:11,920 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=49.3 pTM=0.402 ipTM=0.228 tol=7.58 2024-07-25 16:44:39,024 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=49.3 pTM=0.402 ipTM=0.231 tol=15.1 2024-07-25 16:45:06,073 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=49.2 pTM=0.402 ipTM=0.235 tol=13 2024-07-25 16:45:33,117 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=49.5 pTM=0.405 ipTM=0.233 tol=11.4 2024-07-25 16:46:00,141 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=49.7 pTM=0.405 ipTM=0.253 tol=9.06 2024-07-25 16:46:27,164 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=49.9 pTM=0.406 ipTM=0.228 tol=10.9 2024-07-25 16:46:54,185 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=50.5 pTM=0.412 ipTM=0.261 tol=7.01 2024-07-25 16:47:21,205 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=50.2 pTM=0.41 ipTM=0.234 tol=6.69 2024-07-25 16:47:48,241 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=50.6 pTM=0.409 ipTM=0.26 tol=9.81 2024-07-25 16:48:15,320 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=50.3 pTM=0.41 ipTM=0.233 tol=8.12 2024-07-25 16:48:42,371 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=50.5 pTM=0.413 ipTM=0.277 tol=4.14 2024-07-25 16:49:09,428 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=50.4 pTM=0.41 ipTM=0.239 tol=5.06 2024-07-25 16:49:36,486 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=50.6 pTM=0.413 ipTM=0.286 tol=6.05 2024-07-25 16:50:03,589 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=50.6 pTM=0.406 ipTM=0.25 tol=5.68 2024-07-25 16:50:30,677 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=50.3 pTM=0.407 ipTM=0.281 tol=5.93 2024-07-25 16:50:57,754 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=50.8 pTM=0.413 ipTM=0.234 tol=4.73 2024-07-25 16:51:24,835 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=50.7 pTM=0.41 ipTM=0.257 tol=7.3 2024-07-25 16:51:51,894 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=50.7 pTM=0.402 ipTM=0.23 tol=8.79 2024-07-25 16:52:18,985 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=51.2 pTM=0.403 ipTM=0.263 tol=8.96 2024-07-25 16:52:46,035 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=51.2 pTM=0.406 ipTM=0.232 tol=8.9 2024-07-25 16:53:13,069 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=50.9 pTM=0.405 ipTM=0.249 tol=5.97 2024-07-25 16:53:40,089 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=51.3 pTM=0.411 ipTM=0.221 tol=5.41 2024-07-25 16:53:40,090 alphafold2_multimer_v3_model_4_seed_000 took 838.9s (30 recycles) 2024-07-25 16:54:07,840 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=49.5 pTM=0.39 ipTM=0.15 2024-07-25 16:54:34,912 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=50.4 pTM=0.398 ipTM=0.149 tol=14 2024-07-25 16:55:01,955 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=50.9 pTM=0.404 ipTM=0.166 tol=10.9 2024-07-25 16:55:29,002 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=50.8 pTM=0.404 ipTM=0.154 tol=9.25 2024-07-25 16:55:56,062 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=50.4 pTM=0.404 ipTM=0.155 tol=7.12 2024-07-25 16:56:23,158 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=51.1 pTM=0.41 ipTM=0.166 tol=8.81 2024-07-25 16:56:50,243 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=50.7 pTM=0.406 ipTM=0.158 tol=9.3 2024-07-25 16:57:17,327 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=51.2 pTM=0.413 ipTM=0.164 tol=7.34 2024-07-25 16:57:44,413 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=50.9 pTM=0.406 ipTM=0.15 tol=12.5 2024-07-25 16:58:11,509 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=51.5 pTM=0.412 ipTM=0.169 tol=6.59 2024-07-25 16:58:38,603 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=51.3 pTM=0.407 ipTM=0.157 tol=4.54 2024-07-25 16:59:05,674 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=51.5 pTM=0.413 ipTM=0.154 tol=6.43 2024-07-25 16:59:32,810 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=50.3 pTM=0.405 ipTM=0.149 tol=13.1 2024-07-25 16:59:59,881 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=51.2 pTM=0.407 ipTM=0.146 tol=9.82 2024-07-25 17:00:26,934 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=50.7 pTM=0.404 ipTM=0.147 tol=8.32 2024-07-25 17:00:53,977 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=50.8 pTM=0.404 ipTM=0.147 tol=6.85 2024-07-25 17:01:21,155 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=50.6 pTM=0.403 ipTM=0.175 tol=14.4 2024-07-25 17:01:48,235 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=50.9 pTM=0.407 ipTM=0.147 tol=11.5 2024-07-25 17:02:15,274 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=50.9 pTM=0.405 ipTM=0.161 tol=9.53 2024-07-25 17:02:42,296 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=51.5 pTM=0.411 ipTM=0.173 tol=6.92 2024-07-25 17:03:09,350 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=50.4 pTM=0.399 ipTM=0.174 tol=12.7 2024-07-25 17:03:36,411 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=51 pTM=0.405 ipTM=0.181 tol=10.4 2024-07-25 17:04:03,485 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=51 pTM=0.409 ipTM=0.174 tol=8.24 2024-07-25 17:04:30,557 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=51 pTM=0.412 ipTM=0.205 tol=5.25 2024-07-25 17:04:57,640 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=51.2 pTM=0.412 ipTM=0.198 tol=8.04 2024-07-25 17:05:24,717 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=51.3 pTM=0.411 ipTM=0.192 tol=5.52 2024-07-25 17:05:51,763 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=51.2 pTM=0.411 ipTM=0.208 tol=4.45 2024-07-25 17:06:18,819 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=51.2 pTM=0.413 ipTM=0.208 tol=6.77 2024-07-25 17:06:45,902 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=51.1 pTM=0.41 ipTM=0.197 tol=7.84 2024-07-25 17:07:12,995 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=51.2 pTM=0.415 ipTM=0.197 tol=7.03 2024-07-25 17:07:40,086 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=51.2 pTM=0.413 ipTM=0.188 tol=11 2024-07-25 17:07:40,087 alphafold2_multimer_v3_model_5_seed_000 took 839.3s (30 recycles) 2024-07-25 17:07:40,821 reranking models by 'multimer' metric 2024-07-25 17:07:41,980 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-25 17:09:17,443 Relaxation took 96.6s 2024-07-25 17:09:17,443 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=52.9 pTM=0.427 ipTM=0.314 2024-07-25 17:11:34,573 Relaxation took 137.1s 2024-07-25 17:11:34,573 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=51.3 pTM=0.411 ipTM=0.221 2024-07-25 17:13:17,238 Relaxation took 102.7s 2024-07-25 17:13:17,238 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=51.2 pTM=0.413 ipTM=0.188 2024-07-25 17:15:01,391 Relaxation took 104.2s 2024-07-25 17:15:01,391 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=49.6 pTM=0.385 ipTM=0.16 2024-07-25 17:17:00,401 Relaxation took 119.0s 2024-07-25 17:17:00,401 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=50 pTM=0.376 ipTM=0.138 2024-07-25 17:17:02,535 Done