2024-07-25 15:50:25,740 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-25 15:50:27,059 Running on GPU
2024-07-25 15:50:30,651 Found 6 citations for tools or databases
2024-07-25 15:50:30,652 Query 1/1: AJUBA_ASB7 (length 856)
2024-07-25 15:50:37,193 Timeout while fetching result from MSA server. Retrying...
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2024-07-25 15:52:09,253 Timeout while submitting to MSA server. Retrying...
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2024-07-25 15:53:33,632 Timeout while submitting to MSA server. Retrying...
2024-07-25 15:53:40,085 Timeout while fetching result from MSA server. Retrying...
2024-07-25 15:53:46,112 Timeout while fetching result from MSA server. Retrying...
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2024-07-25 15:54:58,436 Timeout while fetching result from MSA server. Retrying...
2024-07-25 15:55:04,463 Timeout while fetching result from MSA server. Retrying...
2024-07-25 15:55:07,646 Setting max_seq=508, max_extra_seq=2048
2024-07-25 15:57:16,956 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=53.3 pTM=0.435 ipTM=0.202
2024-07-25 15:57:31,151 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=53.8 pTM=0.46 ipTM=0.299 tol=12.4
2024-07-25 15:57:45,344 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=55.7 pTM=0.493 ipTM=0.445 tol=8.63
2024-07-25 15:57:59,564 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=55.1 pTM=0.469 ipTM=0.369 tol=6.91
2024-07-25 15:58:13,799 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=54.7 pTM=0.464 ipTM=0.323 tol=5.14
2024-07-25 15:58:28,073 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=54.2 pTM=0.453 ipTM=0.277 tol=4.82
2024-07-25 15:58:42,337 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=55.3 pTM=0.472 ipTM=0.373 tol=4.04
2024-07-25 15:58:56,608 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=55.2 pTM=0.461 ipTM=0.357 tol=1.99
2024-07-25 15:59:10,884 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=54.5 pTM=0.458 ipTM=0.319 tol=2.33
2024-07-25 15:59:25,167 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=54.8 pTM=0.452 ipTM=0.301 tol=2.32
2024-07-25 15:59:39,475 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=54.3 pTM=0.455 ipTM=0.301 tol=2.05
2024-07-25 15:59:53,777 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=54.4 pTM=0.45 ipTM=0.288 tol=2.32
2024-07-25 16:00:08,063 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=54.9 pTM=0.464 ipTM=0.342 tol=2.26
2024-07-25 16:00:22,376 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=54.3 pTM=0.453 ipTM=0.293 tol=2.12
2024-07-25 16:00:36,688 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=54.2 pTM=0.455 ipTM=0.304 tol=1.32
2024-07-25 16:00:50,998 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=54.3 pTM=0.451 ipTM=0.305 tol=1.38
2024-07-25 16:01:05,304 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=55 pTM=0.467 ipTM=0.333 tol=1.99
2024-07-25 16:01:19,605 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=54.3 pTM=0.451 ipTM=0.301 tol=2.81
2024-07-25 16:01:33,915 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=54.3 pTM=0.458 ipTM=0.317 tol=2.32
2024-07-25 16:01:48,217 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=54.3 pTM=0.451 ipTM=0.31 tol=1.68
2024-07-25 16:02:02,519 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=54.5 pTM=0.462 ipTM=0.328 tol=1.9
2024-07-25 16:02:16,828 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=54.3 pTM=0.45 ipTM=0.306 tol=2.35
2024-07-25 16:02:31,146 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=54.8 pTM=0.459 ipTM=0.315 tol=2.54
2024-07-25 16:02:45,462 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=54.4 pTM=0.451 ipTM=0.3 tol=2.12
2024-07-25 16:02:59,776 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=54.6 pTM=0.46 ipTM=0.332 tol=2.28
2024-07-25 16:03:14,098 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=54.3 pTM=0.451 ipTM=0.309 tol=1.56
2024-07-25 16:03:28,415 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=55 pTM=0.463 ipTM=0.367 tol=1.89
2024-07-25 16:03:42,728 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=54.8 pTM=0.459 ipTM=0.347 tol=1.51
2024-07-25 16:03:57,033 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=55.6 pTM=0.472 ipTM=0.375 tol=2.23
2024-07-25 16:04:11,351 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=54.6 pTM=0.452 ipTM=0.311 tol=2.3
2024-07-25 16:04:25,657 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=54.2 pTM=0.453 ipTM=0.302 tol=2.17
2024-07-25 16:04:25,658 alphafold2_multimer_v3_model_1_seed_000 took 553.5s (30 recycles)
2024-07-25 16:04:40,494 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=52.7 pTM=0.427 ipTM=0.161
2024-07-25 16:04:54,899 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=53.7 pTM=0.434 ipTM=0.164 tol=13.8
2024-07-25 16:05:09,297 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=53 pTM=0.432 ipTM=0.169 tol=8.87
2024-07-25 16:05:23,692 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=54 pTM=0.439 ipTM=0.213 tol=13.6
2024-07-25 16:05:38,106 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=54.1 pTM=0.438 ipTM=0.24 tol=6.54
2024-07-25 16:05:52,530 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=53.7 pTM=0.436 ipTM=0.214 tol=7.52
2024-07-25 16:06:06,927 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=53.9 pTM=0.439 ipTM=0.226 tol=8.71
2024-07-25 16:06:21,329 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=53.9 pTM=0.435 ipTM=0.206 tol=4.91
2024-07-25 16:06:35,723 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=53.6 pTM=0.436 ipTM=0.186 tol=3.44
2024-07-25 16:06:50,125 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=53.7 pTM=0.434 ipTM=0.189 tol=3.58
2024-07-25 16:07:04,529 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=53.5 pTM=0.438 ipTM=0.188 tol=4.14
2024-07-25 16:07:18,938 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=53.7 pTM=0.434 ipTM=0.194 tol=3.15
2024-07-25 16:07:33,346 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=53.5 pTM=0.432 ipTM=0.182 tol=3.16
2024-07-25 16:07:47,758 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=53.4 pTM=0.433 ipTM=0.18 tol=4.29
2024-07-25 16:08:02,154 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=53.1 pTM=0.433 ipTM=0.178 tol=3.52
2024-07-25 16:08:16,550 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=53.2 pTM=0.432 ipTM=0.177 tol=2.33
2024-07-25 16:08:30,944 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=53.2 pTM=0.432 ipTM=0.17 tol=3.39
2024-07-25 16:08:45,348 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=53.2 pTM=0.436 ipTM=0.18 tol=2.79
2024-07-25 16:08:59,755 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=53.2 pTM=0.438 ipTM=0.196 tol=2.76
2024-07-25 16:09:14,170 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=54.1 pTM=0.441 ipTM=0.239 tol=3.27
2024-07-25 16:09:28,578 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=53.8 pTM=0.438 ipTM=0.215 tol=3.58
2024-07-25 16:09:43,008 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=54 pTM=0.44 ipTM=0.216 tol=4.1
2024-07-25 16:09:57,425 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=54.1 pTM=0.439 ipTM=0.2 tol=5.54
2024-07-25 16:10:11,835 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=53.5 pTM=0.435 ipTM=0.177 tol=5.43
2024-07-25 16:10:26,258 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=53.6 pTM=0.435 ipTM=0.197 tol=4.8
2024-07-25 16:10:40,671 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=53.9 pTM=0.441 ipTM=0.242 tol=5.29
2024-07-25 16:10:55,094 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=53.8 pTM=0.434 ipTM=0.213 tol=5.72
2024-07-25 16:11:09,503 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=53.3 pTM=0.429 ipTM=0.175 tol=6.38
2024-07-25 16:11:23,921 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=53.8 pTM=0.445 ipTM=0.23 tol=8.01
2024-07-25 16:11:38,341 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=53.9 pTM=0.44 ipTM=0.205 tol=7.39
2024-07-25 16:11:52,741 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=54 pTM=0.438 ipTM=0.226 tol=5.83
2024-07-25 16:11:52,742 alphafold2_multimer_v3_model_2_seed_000 took 446.6s (30 recycles)
2024-07-25 16:12:07,689 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=53.5 pTM=0.421 ipTM=0.176
2024-07-25 16:12:22,192 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=53.3 pTM=0.426 ipTM=0.19 tol=15.4
2024-07-25 16:12:36,660 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=51.8 pTM=0.422 ipTM=0.159 tol=12
2024-07-25 16:12:51,152 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=52.1 pTM=0.421 ipTM=0.148 tol=9.62
2024-07-25 16:13:05,619 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=52.3 pTM=0.427 ipTM=0.153 tol=6.36
2024-07-25 16:13:20,095 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=51.8 pTM=0.429 ipTM=0.159 tol=9.95
2024-07-25 16:13:34,584 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=52.8 pTM=0.433 ipTM=0.162 tol=8.27
2024-07-25 16:13:49,074 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=52.9 pTM=0.424 ipTM=0.144 tol=6.61
2024-07-25 16:14:03,538 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=52 pTM=0.427 ipTM=0.15 tol=6.1
2024-07-25 16:14:18,015 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=51.9 pTM=0.427 ipTM=0.152 tol=5.79
2024-07-25 16:14:32,508 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=52.1 pTM=0.428 ipTM=0.167 tol=3.72
2024-07-25 16:14:46,984 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=52 pTM=0.428 ipTM=0.161 tol=2.39
2024-07-25 16:15:01,455 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=51.8 pTM=0.428 ipTM=0.154 tol=3.6
2024-07-25 16:15:15,926 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=51.8 pTM=0.43 ipTM=0.155 tol=2.99
2024-07-25 16:15:30,396 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=51.8 pTM=0.427 ipTM=0.154 tol=3.39
2024-07-25 16:15:44,863 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=51.9 pTM=0.427 ipTM=0.149 tol=3.27
2024-07-25 16:15:59,326 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=51.8 pTM=0.428 ipTM=0.155 tol=3.33
2024-07-25 16:16:13,777 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=51.6 pTM=0.43 ipTM=0.153 tol=2.6
2024-07-25 16:16:28,247 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=51.8 pTM=0.429 ipTM=0.157 tol=3.9
2024-07-25 16:16:42,711 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=52.8 pTM=0.434 ipTM=0.165 tol=9.83
2024-07-25 16:16:57,173 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=52.8 pTM=0.428 ipTM=0.151 tol=4.91
2024-07-25 16:17:11,651 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=52.2 pTM=0.427 ipTM=0.153 tol=6.41
2024-07-25 16:17:26,122 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=52.2 pTM=0.431 ipTM=0.151 tol=3.3
2024-07-25 16:17:40,588 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=52.1 pTM=0.428 ipTM=0.152 tol=2.24
2024-07-25 16:17:55,065 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=51.9 pTM=0.429 ipTM=0.15 tol=3.02
2024-07-25 16:18:09,526 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=51.9 pTM=0.429 ipTM=0.152 tol=3.04
2024-07-25 16:18:23,998 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=52.1 pTM=0.43 ipTM=0.151 tol=3.53
2024-07-25 16:18:38,465 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=52.1 pTM=0.428 ipTM=0.152 tol=3.02
2024-07-25 16:18:52,936 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=52 pTM=0.43 ipTM=0.152 tol=3.88
2024-07-25 16:19:07,405 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=52 pTM=0.426 ipTM=0.151 tol=3.69
2024-07-25 16:19:21,856 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=51.8 pTM=0.43 ipTM=0.155 tol=5.56
2024-07-25 16:19:21,857 alphafold2_multimer_v3_model_3_seed_000 took 448.7s (30 recycles)
2024-07-25 16:19:36,806 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=51.7 pTM=0.445 ipTM=0.249
2024-07-25 16:19:51,263 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=54.1 pTM=0.437 ipTM=0.218 tol=16
2024-07-25 16:20:05,726 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=54.6 pTM=0.467 ipTM=0.431 tol=8.02
2024-07-25 16:20:20,175 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=55.8 pTM=0.454 ipTM=0.368 tol=8.82
2024-07-25 16:20:34,649 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=54.2 pTM=0.434 ipTM=0.227 tol=10.4
2024-07-25 16:20:49,149 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=54.3 pTM=0.448 ipTM=0.284 tol=8.46
2024-07-25 16:21:03,616 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=55.1 pTM=0.439 ipTM=0.262 tol=8.88
2024-07-25 16:21:18,093 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=54.6 pTM=0.457 ipTM=0.317 tol=4.89
2024-07-25 16:21:32,568 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=54.7 pTM=0.442 ipTM=0.332 tol=6.34
2024-07-25 16:21:47,039 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=55.4 pTM=0.466 ipTM=0.445 tol=6.64
2024-07-25 16:22:01,488 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=55.9 pTM=0.452 ipTM=0.321 tol=6.52
2024-07-25 16:22:15,960 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=53.8 pTM=0.431 ipTM=0.187 tol=11.9
2024-07-25 16:22:30,444 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=54.2 pTM=0.449 ipTM=0.3 tol=10.8
2024-07-25 16:22:44,915 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=54.9 pTM=0.441 ipTM=0.279 tol=8.53
2024-07-25 16:22:59,397 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=52.9 pTM=0.431 ipTM=0.183 tol=8.61
2024-07-25 16:23:13,898 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=52.8 pTM=0.428 ipTM=0.177 tol=11
2024-07-25 16:23:28,390 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=52.4 pTM=0.43 ipTM=0.158 tol=11
2024-07-25 16:23:42,879 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=52.9 pTM=0.43 ipTM=0.16 tol=7.93
2024-07-25 16:23:57,368 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=52.9 pTM=0.43 ipTM=0.162 tol=10.3
2024-07-25 16:24:11,841 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=54.3 pTM=0.438 ipTM=0.262 tol=7.33
2024-07-25 16:24:26,308 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=54.8 pTM=0.464 ipTM=0.472 tol=6.4
2024-07-25 16:24:40,767 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=56.3 pTM=0.457 ipTM=0.419 tol=5.18
2024-07-25 16:24:55,254 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=54.3 pTM=0.432 ipTM=0.198 tol=10.1
2024-07-25 16:25:09,738 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=53.3 pTM=0.431 ipTM=0.176 tol=6.47
2024-07-25 16:25:24,180 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=55.9 pTM=0.458 ipTM=0.457 tol=8.65
2024-07-25 16:25:38,629 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=56 pTM=0.448 ipTM=0.302 tol=4.56
2024-07-25 16:25:53,102 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=53.5 pTM=0.436 ipTM=0.194 tol=15.1
2024-07-25 16:26:07,606 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=53.5 pTM=0.433 ipTM=0.186 tol=11.1
2024-07-25 16:26:22,065 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=56.2 pTM=0.46 ipTM=0.345 tol=10.1
2024-07-25 16:26:36,537 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=55.1 pTM=0.431 ipTM=0.216 tol=6.14
2024-07-25 16:26:51,013 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=54.5 pTM=0.447 ipTM=0.259 tol=5.94
2024-07-25 16:26:51,014 alphafold2_multimer_v3_model_4_seed_000 took 448.7s (30 recycles)
2024-07-25 16:27:05,922 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=53.7 pTM=0.452 ipTM=0.264
2024-07-25 16:27:20,345 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=55.9 pTM=0.465 ipTM=0.342 tol=14.4
2024-07-25 16:27:34,764 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=55.6 pTM=0.444 ipTM=0.282 tol=7.76
2024-07-25 16:27:49,176 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=56.7 pTM=0.483 ipTM=0.479 tol=4.89
2024-07-25 16:28:03,586 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=56.2 pTM=0.461 ipTM=0.362 tol=6.15
2024-07-25 16:28:18,010 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=54.9 pTM=0.442 ipTM=0.274 tol=5.68
2024-07-25 16:28:32,464 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=53.9 pTM=0.432 ipTM=0.193 tol=8.12
2024-07-25 16:28:46,951 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=53.2 pTM=0.43 ipTM=0.183 tol=14.9
2024-07-25 16:29:01,384 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=56.6 pTM=0.486 ipTM=0.506 tol=14.2
2024-07-25 16:29:15,794 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=57.3 pTM=0.478 ipTM=0.44 tol=7.82
2024-07-25 16:29:30,208 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=57 pTM=0.471 ipTM=0.432 tol=5.39
2024-07-25 16:29:44,637 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=55.8 pTM=0.448 ipTM=0.303 tol=3.49
2024-07-25 16:29:59,066 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=54.8 pTM=0.441 ipTM=0.26 tol=5.8
2024-07-25 16:30:13,539 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=54.1 pTM=0.433 ipTM=0.191 tol=6.77
2024-07-25 16:30:28,023 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=53.1 pTM=0.43 ipTM=0.182 tol=10.7
2024-07-25 16:30:42,469 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=55.4 pTM=0.461 ipTM=0.364 tol=11.9
2024-07-25 16:30:56,899 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=55.2 pTM=0.438 ipTM=0.249 tol=9.15
2024-07-25 16:31:11,347 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=56.2 pTM=0.483 ipTM=0.539 tol=5.09
2024-07-25 16:31:25,775 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=56.8 pTM=0.477 ipTM=0.482 tol=5.77
2024-07-25 16:31:40,206 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=55.4 pTM=0.449 ipTM=0.321 tol=6.34
2024-07-25 16:31:54,654 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=54.3 pTM=0.433 ipTM=0.25 tol=6.17
2024-07-25 16:32:09,109 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=55.3 pTM=0.461 ipTM=0.412 tol=6.22
2024-07-25 16:32:23,540 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=56.1 pTM=0.461 ipTM=0.364 tol=5.9
2024-07-25 16:32:37,981 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=54.6 pTM=0.433 ipTM=0.24 tol=6.87
2024-07-25 16:32:52,451 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=54.3 pTM=0.434 ipTM=0.255 tol=4.78
2024-07-25 16:33:06,919 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=55.1 pTM=0.435 ipTM=0.283 tol=5.37
2024-07-25 16:33:21,374 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=56.1 pTM=0.477 ipTM=0.468 tol=4.63
2024-07-25 16:33:35,817 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=56.2 pTM=0.464 ipTM=0.474 tol=4.64
2024-07-25 16:33:50,250 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=55.3 pTM=0.439 ipTM=0.282 tol=5.25
2024-07-25 16:34:04,700 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=54.9 pTM=0.434 ipTM=0.255 tol=3.33
2024-07-25 16:34:19,168 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=53.9 pTM=0.431 ipTM=0.192 tol=8.84
2024-07-25 16:34:19,169 alphafold2_multimer_v3_model_5_seed_000 took 447.7s (30 recycles)
2024-07-25 16:34:19,629 reranking models by 'multimer' metric
2024-07-25 16:34:22,978 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-25 16:35:39,090 Relaxation took 79.5s
2024-07-25 16:35:39,090 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=54.2 pTM=0.453 ipTM=0.302
2024-07-25 16:36:33,447 Relaxation took 54.4s
2024-07-25 16:36:33,447 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=54.5 pTM=0.447 ipTM=0.259
2024-07-25 16:37:24,832 Relaxation took 51.4s
2024-07-25 16:37:24,833 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=54 pTM=0.438 ipTM=0.226
2024-07-25 16:38:43,949 Relaxation took 79.1s
2024-07-25 16:38:43,949 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=53.9 pTM=0.431 ipTM=0.192
2024-07-25 16:40:09,840 Relaxation took 85.9s
2024-07-25 16:40:09,840 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=51.8 pTM=0.43 ipTM=0.155
2024-07-25 16:40:11,319 Done