2024-07-25 15:50:25,735 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-25 15:50:26,486 Running on GPU 2024-07-25 15:50:30,622 Found 6 citations for tools or databases 2024-07-25 15:50:30,622 Query 1/1: AJUBA_FBXW9 (length 996) 2024-07-25 15:50:37,249 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:50:43,276 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:50:49,300 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:50:55,328 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:51:01,355 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:51:07,382 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:51:13,409 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:51:19,432 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:51:25,460 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:51:31,487 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:51:37,514 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:51:43,541 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:51:49,565 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:51:55,587 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:52:01,614 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:52:09,201 Timeout while submitting to MSA server. Retrying... 2024-07-25 15:52:15,229 Timeout while submitting to MSA server. Retrying... 2024-07-25 15:52:21,258 Timeout while submitting to MSA server. Retrying... 2024-07-25 15:52:27,285 Timeout while submitting to MSA server. Retrying... 2024-07-25 15:52:33,311 Timeout while submitting to MSA server. Retrying... 2024-07-25 15:52:39,338 Timeout while submitting to MSA server. Retrying... 2024-07-25 15:52:45,366 Timeout while submitting to MSA server. Retrying... 2024-07-25 15:52:51,393 Timeout while submitting to MSA server. Retrying... 2024-07-25 15:52:57,420 Timeout while submitting to MSA server. Retrying... 2024-07-25 15:53:03,443 Timeout while submitting to MSA server. Retrying... 2024-07-25 15:53:09,470 Timeout while submitting to MSA server. Retrying... 2024-07-25 15:53:15,498 Timeout while submitting to MSA server. Retrying... 2024-07-25 15:53:21,525 Timeout while submitting to MSA server. Retrying... 2024-07-25 15:53:27,552 Timeout while submitting to MSA server. Retrying... 2024-07-25 15:53:33,575 Timeout while submitting to MSA server. Retrying... 2024-07-25 15:53:40,141 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:53:46,168 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:53:52,195 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:53:58,223 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:54:04,251 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:54:10,277 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:54:16,301 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:54:22,328 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:54:28,356 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:54:34,383 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:54:40,410 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:54:46,437 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:54:52,462 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:54:58,489 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:55:04,516 Timeout while fetching result from MSA server. Retrying... 2024-07-25 15:55:08,005 Setting max_seq=508, max_extra_seq=2048 2024-07-25 15:58:30,589 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=53.6 pTM=0.461 ipTM=0.319 2024-07-25 15:58:56,503 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=53.3 pTM=0.458 ipTM=0.196 tol=17.5 2024-07-25 15:59:22,514 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=53.4 pTM=0.457 ipTM=0.206 tol=10.7 2024-07-25 15:59:48,647 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=53 pTM=0.456 ipTM=0.19 tol=7.95 2024-07-25 16:00:14,784 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=53.2 pTM=0.455 ipTM=0.186 tol=7.87 2024-07-25 16:00:40,903 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=53 pTM=0.458 ipTM=0.182 tol=4.12 2024-07-25 16:01:06,996 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=53 pTM=0.457 ipTM=0.178 tol=5.75 2024-07-25 16:01:33,066 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=53 pTM=0.457 ipTM=0.184 tol=3.78 2024-07-25 16:01:59,133 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=53.4 pTM=0.457 ipTM=0.184 tol=5.24 2024-07-25 16:02:25,167 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=53.6 pTM=0.459 ipTM=0.194 tol=4.62 2024-07-25 16:02:51,215 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=53.5 pTM=0.458 ipTM=0.186 tol=4.14 2024-07-25 16:03:17,253 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=53.2 pTM=0.457 ipTM=0.185 tol=4.02 2024-07-25 16:03:43,299 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=53.3 pTM=0.46 ipTM=0.195 tol=4.66 2024-07-25 16:04:09,308 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=52.9 pTM=0.458 ipTM=0.195 tol=4.47 2024-07-25 16:04:35,355 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=53.1 pTM=0.458 ipTM=0.179 tol=3.87 2024-07-25 16:05:01,368 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=52.8 pTM=0.46 ipTM=0.183 tol=4.95 2024-07-25 16:05:27,394 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=53.2 pTM=0.457 ipTM=0.18 tol=5.42 2024-07-25 16:05:53,419 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=53 pTM=0.458 ipTM=0.197 tol=4.96 2024-07-25 16:06:19,458 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=53 pTM=0.458 ipTM=0.186 tol=3.85 2024-07-25 16:06:45,495 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=53.1 pTM=0.459 ipTM=0.202 tol=4.91 2024-07-25 16:07:11,546 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=53.2 pTM=0.458 ipTM=0.19 tol=4.14 2024-07-25 16:07:37,592 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=53.4 pTM=0.459 ipTM=0.196 tol=4.19 2024-07-25 16:08:03,644 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=53.1 pTM=0.458 ipTM=0.189 tol=4.78 2024-07-25 16:08:29,698 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=53.1 pTM=0.457 ipTM=0.183 tol=3.34 2024-07-25 16:08:55,756 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=53 pTM=0.458 ipTM=0.183 tol=1.83 2024-07-25 16:09:21,802 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=53.3 pTM=0.46 ipTM=0.188 tol=2.9 2024-07-25 16:09:47,840 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=53 pTM=0.458 ipTM=0.183 tol=2.98 2024-07-25 16:10:13,876 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=53.2 pTM=0.459 ipTM=0.189 tol=2.95 2024-07-25 16:10:39,892 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=52.8 pTM=0.459 ipTM=0.187 tol=2.25 2024-07-25 16:11:05,916 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=53 pTM=0.458 ipTM=0.192 tol=3.56 2024-07-25 16:11:31,950 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=53.2 pTM=0.46 ipTM=0.184 tol=3.26 2024-07-25 16:11:31,951 alphafold2_multimer_v3_model_1_seed_000 took 977.4s (30 recycles) 2024-07-25 16:11:58,773 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=53.9 pTM=0.465 ipTM=0.465 2024-07-25 16:12:24,886 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=54.8 pTM=0.464 ipTM=0.238 tol=15.2 2024-07-25 16:12:50,993 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=54 pTM=0.456 ipTM=0.172 tol=9.38 2024-07-25 16:13:17,121 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=54.3 pTM=0.458 ipTM=0.169 tol=10.9 2024-07-25 16:13:43,246 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=54.2 pTM=0.461 ipTM=0.173 tol=8.97 2024-07-25 16:14:09,391 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=54.2 pTM=0.462 ipTM=0.174 tol=3.37 2024-07-25 16:14:35,499 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=54 pTM=0.462 ipTM=0.174 tol=3.97 2024-07-25 16:15:01,632 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=54.5 pTM=0.461 ipTM=0.171 tol=3.5 2024-07-25 16:15:27,737 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=54.4 pTM=0.462 ipTM=0.173 tol=3.58 2024-07-25 16:15:53,849 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=54.3 pTM=0.463 ipTM=0.175 tol=4.2 2024-07-25 16:16:19,955 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=54.3 pTM=0.461 ipTM=0.173 tol=4.03 2024-07-25 16:16:46,058 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=54.2 pTM=0.462 ipTM=0.175 tol=7.76 2024-07-25 16:17:12,161 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=54.4 pTM=0.463 ipTM=0.174 tol=3.56 2024-07-25 16:17:38,265 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=54.1 pTM=0.463 ipTM=0.178 tol=3.98 2024-07-25 16:18:04,363 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=54.3 pTM=0.466 ipTM=0.179 tol=6.71 2024-07-25 16:18:30,462 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=54.2 pTM=0.465 ipTM=0.18 tol=3.99 2024-07-25 16:18:56,550 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=54.4 pTM=0.464 ipTM=0.177 tol=4.47 2024-07-25 16:19:22,639 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=54.3 pTM=0.463 ipTM=0.178 tol=3.47 2024-07-25 16:19:48,712 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=54.2 pTM=0.464 ipTM=0.179 tol=4.65 2024-07-25 16:20:14,820 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=54.3 pTM=0.464 ipTM=0.178 tol=4.27 2024-07-25 16:20:40,918 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=54.3 pTM=0.462 ipTM=0.175 tol=7.41 2024-07-25 16:21:07,011 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=54.5 pTM=0.462 ipTM=0.174 tol=4.61 2024-07-25 16:21:33,082 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=54.3 pTM=0.464 ipTM=0.179 tol=8.53 2024-07-25 16:21:59,178 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=54.2 pTM=0.462 ipTM=0.175 tol=5.11 2024-07-25 16:22:25,265 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=54 pTM=0.461 ipTM=0.175 tol=6.71 2024-07-25 16:22:51,365 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=54.2 pTM=0.462 ipTM=0.176 tol=5.09 2024-07-25 16:23:17,459 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=54.1 pTM=0.46 ipTM=0.172 tol=5.76 2024-07-25 16:23:43,554 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=54.3 pTM=0.464 ipTM=0.18 tol=6.4 2024-07-25 16:24:09,653 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=54.2 pTM=0.461 ipTM=0.174 tol=4.6 2024-07-25 16:24:35,751 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=54.1 pTM=0.463 ipTM=0.179 tol=2.73 2024-07-25 16:25:01,849 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=54.2 pTM=0.463 ipTM=0.179 tol=4.16 2024-07-25 16:25:01,849 alphafold2_multimer_v3_model_2_seed_000 took 809.1s (30 recycles) 2024-07-25 16:25:28,796 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=53.6 pTM=0.454 ipTM=0.175 2024-07-25 16:25:54,953 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=53.7 pTM=0.459 ipTM=0.188 tol=16.8 2024-07-25 16:26:21,114 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=53.3 pTM=0.459 ipTM=0.183 tol=12.5 2024-07-25 16:26:47,270 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=53.3 pTM=0.463 ipTM=0.186 tol=11.5 2024-07-25 16:27:13,468 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=53.1 pTM=0.461 ipTM=0.178 tol=11.7 2024-07-25 16:27:39,646 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=53.3 pTM=0.465 ipTM=0.186 tol=6.07 2024-07-25 16:28:05,821 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=53.2 pTM=0.463 ipTM=0.184 tol=5.23 2024-07-25 16:28:31,987 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=53.1 pTM=0.466 ipTM=0.19 tol=5.43 2024-07-25 16:28:58,172 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=53.1 pTM=0.459 ipTM=0.177 tol=5.73 2024-07-25 16:29:24,353 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=53.2 pTM=0.465 ipTM=0.187 tol=8.07 2024-07-25 16:29:50,541 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=53 pTM=0.462 ipTM=0.182 tol=7.04 2024-07-25 16:30:16,717 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=52.8 pTM=0.464 ipTM=0.186 tol=5.18 2024-07-25 16:30:42,911 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=53 pTM=0.465 ipTM=0.185 tol=4.77 2024-07-25 16:31:09,066 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=53 pTM=0.466 ipTM=0.188 tol=5.97 2024-07-25 16:31:35,238 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=52.9 pTM=0.464 ipTM=0.184 tol=4.67 2024-07-25 16:32:01,409 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=52.9 pTM=0.466 ipTM=0.188 tol=4 2024-07-25 16:32:27,596 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=53 pTM=0.464 ipTM=0.185 tol=5.02 2024-07-25 16:32:53,761 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=52.9 pTM=0.464 ipTM=0.187 tol=5.05 2024-07-25 16:33:19,927 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=52.8 pTM=0.463 ipTM=0.185 tol=6.79 2024-07-25 16:33:46,104 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=52.8 pTM=0.464 ipTM=0.185 tol=3.77 2024-07-25 16:34:12,296 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=52.9 pTM=0.463 ipTM=0.186 tol=3.38 2024-07-25 16:34:38,481 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=53.1 pTM=0.467 ipTM=0.19 tol=4.31 2024-07-25 16:35:04,657 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=52.8 pTM=0.463 ipTM=0.184 tol=6.34 2024-07-25 16:35:30,826 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=52.8 pTM=0.465 ipTM=0.188 tol=3.39 2024-07-25 16:35:57,000 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=52.6 pTM=0.465 ipTM=0.188 tol=7.01 2024-07-25 16:36:23,187 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=52.8 pTM=0.461 ipTM=0.18 tol=5.04 2024-07-25 16:36:49,365 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=52.7 pTM=0.463 ipTM=0.185 tol=6.29 2024-07-25 16:37:15,555 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=52.8 pTM=0.46 ipTM=0.187 tol=8.61 2024-07-25 16:37:41,718 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=52.7 pTM=0.462 ipTM=0.182 tol=5.71 2024-07-25 16:38:07,888 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=52.8 pTM=0.461 ipTM=0.182 tol=7.65 2024-07-25 16:38:34,055 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=52.8 pTM=0.463 ipTM=0.185 tol=5.16 2024-07-25 16:38:34,056 alphafold2_multimer_v3_model_3_seed_000 took 811.4s (30 recycles) 2024-07-25 16:39:00,984 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=52.3 pTM=0.457 ipTM=0.185 2024-07-25 16:39:27,130 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=52.5 pTM=0.455 ipTM=0.198 tol=18.4 2024-07-25 16:39:53,270 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=53.3 pTM=0.457 ipTM=0.166 tol=15.9 2024-07-25 16:40:19,422 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=53 pTM=0.463 ipTM=0.172 tol=5.32 2024-07-25 16:40:45,613 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=53 pTM=0.459 ipTM=0.164 tol=6.76 2024-07-25 16:41:11,776 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=53 pTM=0.464 ipTM=0.172 tol=6.06 2024-07-25 16:41:37,962 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=53.1 pTM=0.461 ipTM=0.167 tol=5.18 2024-07-25 16:42:04,134 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=52.8 pTM=0.463 ipTM=0.168 tol=4.27 2024-07-25 16:42:30,319 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=53.1 pTM=0.464 ipTM=0.172 tol=6.35 2024-07-25 16:42:56,493 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=53.2 pTM=0.466 ipTM=0.185 tol=4.65 2024-07-25 16:43:22,685 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=53.4 pTM=0.464 ipTM=0.17 tol=4.41 2024-07-25 16:43:48,864 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=53.1 pTM=0.465 ipTM=0.183 tol=4.85 2024-07-25 16:44:15,036 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=53.1 pTM=0.464 ipTM=0.169 tol=5.6 2024-07-25 16:44:41,223 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=52.9 pTM=0.465 ipTM=0.173 tol=4.91 2024-07-25 16:45:07,399 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=52.9 pTM=0.463 ipTM=0.169 tol=8.05 2024-07-25 16:45:33,583 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=52.9 pTM=0.462 ipTM=0.168 tol=6.9 2024-07-25 16:45:59,747 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=53 pTM=0.462 ipTM=0.167 tol=7.13 2024-07-25 16:46:25,904 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=52.8 pTM=0.463 ipTM=0.175 tol=10 2024-07-25 16:46:52,034 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=52.7 pTM=0.464 ipTM=0.177 tol=9.03 2024-07-25 16:47:18,190 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=52.9 pTM=0.465 ipTM=0.174 tol=6.03 2024-07-25 16:47:44,338 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=52.8 pTM=0.463 ipTM=0.193 tol=4.77 2024-07-25 16:48:10,492 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=53.2 pTM=0.465 ipTM=0.174 tol=6.64 2024-07-25 16:48:36,653 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=52.9 pTM=0.464 ipTM=0.178 tol=8.54 2024-07-25 16:49:02,827 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=52.8 pTM=0.463 ipTM=0.169 tol=4.11 2024-07-25 16:49:28,977 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=52.8 pTM=0.464 ipTM=0.171 tol=6.42 2024-07-25 16:49:55,150 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=52.9 pTM=0.467 ipTM=0.2 tol=4.71 2024-07-25 16:50:21,311 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=52.6 pTM=0.463 ipTM=0.172 tol=8.66 2024-07-25 16:50:47,463 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=52.9 pTM=0.465 ipTM=0.172 tol=9.73 2024-07-25 16:51:13,615 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=52.8 pTM=0.463 ipTM=0.17 tol=6.59 2024-07-25 16:51:39,790 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=52.9 pTM=0.464 ipTM=0.172 tol=6.05 2024-07-25 16:52:05,945 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=52.9 pTM=0.468 ipTM=0.222 tol=6.03 2024-07-25 16:52:05,946 alphafold2_multimer_v3_model_4_seed_000 took 811.1s (30 recycles) 2024-07-25 16:52:32,968 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=52.4 pTM=0.445 ipTM=0.17 2024-07-25 16:52:59,190 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=53.9 pTM=0.45 ipTM=0.223 tol=14.7 2024-07-25 16:53:25,414 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=53 pTM=0.453 ipTM=0.177 tol=14.1 2024-07-25 16:53:51,648 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=53.4 pTM=0.459 ipTM=0.191 tol=8.38 2024-07-25 16:54:17,902 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=53.4 pTM=0.459 ipTM=0.185 tol=10.7 2024-07-25 16:54:44,155 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=53.8 pTM=0.462 ipTM=0.183 tol=8.94 2024-07-25 16:55:10,398 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=53.3 pTM=0.458 ipTM=0.181 tol=9.31 2024-07-25 16:55:36,656 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=53.5 pTM=0.46 ipTM=0.18 tol=6.97 2024-07-25 16:56:02,916 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=53.2 pTM=0.461 ipTM=0.181 tol=8.39 2024-07-25 16:56:29,199 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=53.7 pTM=0.458 ipTM=0.179 tol=4.93 2024-07-25 16:56:55,447 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=53.9 pTM=0.46 ipTM=0.183 tol=7.64 2024-07-25 16:57:21,690 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=53.7 pTM=0.461 ipTM=0.182 tol=7.84 2024-07-25 16:57:47,959 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=53.1 pTM=0.461 ipTM=0.182 tol=7.75 2024-07-25 16:58:14,215 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=53.3 pTM=0.459 ipTM=0.181 tol=9.3 2024-07-25 16:58:40,473 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=53.4 pTM=0.462 ipTM=0.183 tol=13.1 2024-07-25 16:59:06,727 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=53.3 pTM=0.461 ipTM=0.182 tol=7.65 2024-07-25 16:59:32,992 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=53.3 pTM=0.459 ipTM=0.179 tol=7.01 2024-07-25 16:59:59,248 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=53.4 pTM=0.458 ipTM=0.18 tol=9.43 2024-07-25 17:00:25,499 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=53.1 pTM=0.458 ipTM=0.178 tol=11.2 2024-07-25 17:00:51,758 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=53.3 pTM=0.457 ipTM=0.176 tol=9.81 2024-07-25 17:01:18,019 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=53.8 pTM=0.46 ipTM=0.183 tol=10.9 2024-07-25 17:01:44,285 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=53.5 pTM=0.461 ipTM=0.183 tol=11.2 2024-07-25 17:02:10,535 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=53.4 pTM=0.46 ipTM=0.184 tol=8.77 2024-07-25 17:02:36,783 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=53.4 pTM=0.458 ipTM=0.178 tol=7.41 2024-07-25 17:03:03,024 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=53.3 pTM=0.459 ipTM=0.181 tol=8.09 2024-07-25 17:03:29,275 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=53.2 pTM=0.458 ipTM=0.179 tol=7.4 2024-07-25 17:03:55,536 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=53.3 pTM=0.458 ipTM=0.177 tol=6.88 2024-07-25 17:04:21,784 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=53.7 pTM=0.458 ipTM=0.177 tol=6.21 2024-07-25 17:04:48,024 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=53.4 pTM=0.459 ipTM=0.18 tol=7.43 2024-07-25 17:05:14,262 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=53.2 pTM=0.459 ipTM=0.181 tol=5.78 2024-07-25 17:05:40,514 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=53.3 pTM=0.457 ipTM=0.176 tol=7.02 2024-07-25 17:05:40,515 alphafold2_multimer_v3_model_5_seed_000 took 813.8s (30 recycles) 2024-07-25 17:05:41,292 reranking models by 'multimer' metric 2024-07-25 17:05:44,587 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-25 17:08:10,968 Relaxation took 149.7s 2024-07-25 17:08:10,968 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=52.9 pTM=0.468 ipTM=0.222 2024-07-25 17:10:44,888 Relaxation took 153.9s 2024-07-25 17:10:44,888 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=52.8 pTM=0.463 ipTM=0.185 2024-07-25 17:13:48,562 Relaxation took 183.7s 2024-07-25 17:13:48,562 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=53.2 pTM=0.46 ipTM=0.184 2024-07-25 17:15:40,340 Relaxation took 111.8s 2024-07-25 17:15:40,340 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=54.2 pTM=0.463 ipTM=0.179 2024-07-25 17:17:14,394 Relaxation took 94.1s 2024-07-25 17:17:14,394 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=53.3 pTM=0.457 ipTM=0.176 2024-07-25 17:17:16,554 Done