2024-07-25 15:50:25,735 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-25 15:50:26,486 Running on GPU
2024-07-25 15:50:30,622 Found 6 citations for tools or databases
2024-07-25 15:50:30,622 Query 1/1: AJUBA_KBTBD13 (length 996)
2024-07-25 15:50:37,159 Timeout while fetching result from MSA server. Retrying...
2024-07-25 15:50:43,186 Timeout while fetching result from MSA server. Retrying...
2024-07-25 15:50:49,214 Timeout while fetching result from MSA server. Retrying...
2024-07-25 15:50:55,241 Timeout while fetching result from MSA server. Retrying...
2024-07-25 15:51:01,265 Timeout while fetching result from MSA server. Retrying...
2024-07-25 15:51:07,292 Timeout while fetching result from MSA server. Retrying...
2024-07-25 15:51:13,319 Timeout while fetching result from MSA server. Retrying...
2024-07-25 15:51:19,347 Timeout while fetching result from MSA server. Retrying...
2024-07-25 15:51:25,374 Timeout while fetching result from MSA server. Retrying...
2024-07-25 15:51:31,401 Timeout while fetching result from MSA server. Retrying...
2024-07-25 15:51:37,428 Timeout while fetching result from MSA server. Retrying...
2024-07-25 15:51:43,455 Timeout while fetching result from MSA server. Retrying...
2024-07-25 15:51:49,482 Timeout while fetching result from MSA server. Retrying...
2024-07-25 15:51:55,510 Timeout while fetching result from MSA server. Retrying...
2024-07-25 15:52:01,537 Timeout while fetching result from MSA server. Retrying...
2024-07-25 15:52:09,260 Timeout while fetching result from MSA server. Retrying...
2024-07-25 15:52:15,285 Timeout while fetching result from MSA server. Retrying...
2024-07-25 15:52:21,312 Timeout while fetching result from MSA server. Retrying...
2024-07-25 15:52:27,339 Timeout while fetching result from MSA server. Retrying...
2024-07-25 15:52:33,366 Timeout while fetching result from MSA server. Retrying...
2024-07-25 15:52:39,393 Timeout while fetching result from MSA server. Retrying...
2024-07-25 15:52:45,421 Timeout while fetching result from MSA server. Retrying...
2024-07-25 15:52:51,448 Timeout while fetching result from MSA server. Retrying...
2024-07-25 15:52:57,475 Timeout while fetching result from MSA server. Retrying...
2024-07-25 15:53:03,502 Timeout while fetching result from MSA server. Retrying...
2024-07-25 15:53:09,529 Timeout while fetching result from MSA server. Retrying...
2024-07-25 15:53:15,556 Timeout while fetching result from MSA server. Retrying...
2024-07-25 15:53:21,584 Timeout while fetching result from MSA server. Retrying...
2024-07-25 15:53:27,611 Timeout while fetching result from MSA server. Retrying...
2024-07-25 15:53:33,638 Timeout while fetching result from MSA server. Retrying...
2024-07-25 15:53:39,986 Timeout while fetching result from MSA server. Retrying...
2024-07-25 15:53:46,013 Timeout while fetching result from MSA server. Retrying...
2024-07-25 15:53:52,041 Timeout while fetching result from MSA server. Retrying...
2024-07-25 15:53:58,068 Timeout while fetching result from MSA server. Retrying...
2024-07-25 15:54:04,096 Timeout while fetching result from MSA server. Retrying...
2024-07-25 15:54:10,123 Timeout while fetching result from MSA server. Retrying...
2024-07-25 15:54:16,150 Timeout while fetching result from MSA server. Retrying...
2024-07-25 15:54:22,177 Timeout while fetching result from MSA server. Retrying...
2024-07-25 15:54:28,202 Timeout while fetching result from MSA server. Retrying...
2024-07-25 15:54:34,230 Timeout while fetching result from MSA server. Retrying...
2024-07-25 15:54:40,257 Timeout while fetching result from MSA server. Retrying...
2024-07-25 15:54:46,284 Timeout while fetching result from MSA server. Retrying...
2024-07-25 15:54:52,311 Timeout while fetching result from MSA server. Retrying...
2024-07-25 15:54:58,334 Timeout while fetching result from MSA server. Retrying...
2024-07-25 15:55:04,361 Timeout while fetching result from MSA server. Retrying...
2024-07-25 15:55:07,962 Setting max_seq=508, max_extra_seq=2048
2024-07-25 15:58:30,567 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=57.2 pTM=0.541 ipTM=0.59
2024-07-25 15:58:56,591 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=58.7 pTM=0.542 ipTM=0.374 tol=12.1
2024-07-25 15:59:22,768 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=59.4 pTM=0.547 ipTM=0.438 tol=9.05
2024-07-25 15:59:49,029 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=58 pTM=0.534 ipTM=0.331 tol=5.07
2024-07-25 16:00:15,325 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=57.5 pTM=0.534 ipTM=0.279 tol=4.12
2024-07-25 16:00:41,633 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=58 pTM=0.531 ipTM=0.295 tol=2.9
2024-07-25 16:01:07,889 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=57.7 pTM=0.533 ipTM=0.268 tol=2.72
2024-07-25 16:01:34,153 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=58.5 pTM=0.534 ipTM=0.308 tol=2.58
2024-07-25 16:02:00,384 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=58.1 pTM=0.536 ipTM=0.274 tol=1.78
2024-07-25 16:02:26,600 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=58.5 pTM=0.534 ipTM=0.298 tol=1.78
2024-07-25 16:02:52,818 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=58.3 pTM=0.535 ipTM=0.286 tol=2.67
2024-07-25 16:03:19,020 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=58.5 pTM=0.536 ipTM=0.326 tol=2.37
2024-07-25 16:03:45,208 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=58.3 pTM=0.536 ipTM=0.282 tol=2.26
2024-07-25 16:04:11,394 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=58.1 pTM=0.532 ipTM=0.293 tol=2.47
2024-07-25 16:04:37,590 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=58 pTM=0.535 ipTM=0.274 tol=2.81
2024-07-25 16:05:03,772 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=58.5 pTM=0.538 ipTM=0.339 tol=2.67
2024-07-25 16:05:29,974 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=58.3 pTM=0.536 ipTM=0.275 tol=2.13
2024-07-25 16:05:56,178 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=58.5 pTM=0.536 ipTM=0.322 tol=1.68
2024-07-25 16:06:22,377 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=58 pTM=0.535 ipTM=0.279 tol=1.86
2024-07-25 16:06:48,594 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=58.2 pTM=0.532 ipTM=0.281 tol=2.02
2024-07-25 16:07:14,833 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=58.1 pTM=0.534 ipTM=0.283 tol=2.61
2024-07-25 16:07:41,061 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=58.6 pTM=0.536 ipTM=0.333 tol=2.24
2024-07-25 16:08:07,286 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=57.9 pTM=0.532 ipTM=0.281 tol=2.51
2024-07-25 16:08:33,505 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=57.7 pTM=0.532 ipTM=0.283 tol=2
2024-07-25 16:08:59,740 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=57.7 pTM=0.53 ipTM=0.275 tol=2.85
2024-07-25 16:09:25,953 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=57.6 pTM=0.533 ipTM=0.277 tol=3.71
2024-07-25 16:09:52,180 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=57.8 pTM=0.53 ipTM=0.276 tol=3.71
2024-07-25 16:10:18,386 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=57.6 pTM=0.533 ipTM=0.302 tol=3.93
2024-07-25 16:10:44,601 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=58.1 pTM=0.532 ipTM=0.267 tol=2.7
2024-07-25 16:11:10,809 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=57.9 pTM=0.534 ipTM=0.296 tol=2.41
2024-07-25 16:11:37,017 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=58.6 pTM=0.534 ipTM=0.288 tol=2.85
2024-07-25 16:11:37,018 alphafold2_multimer_v3_model_1_seed_000 took 982.5s (30 recycles)
2024-07-25 16:12:04,020 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=57.3 pTM=0.534 ipTM=0.552
2024-07-25 16:12:30,268 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=57.3 pTM=0.53 ipTM=0.288 tol=12
2024-07-25 16:12:56,527 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=57.4 pTM=0.532 ipTM=0.278 tol=9.34
2024-07-25 16:13:22,780 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=56.9 pTM=0.529 ipTM=0.275 tol=8.99
2024-07-25 16:13:49,033 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=57 pTM=0.527 ipTM=0.281 tol=6.53
2024-07-25 16:14:15,311 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=57.5 pTM=0.53 ipTM=0.264 tol=8.17
2024-07-25 16:14:41,553 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=57.4 pTM=0.53 ipTM=0.281 tol=6.79
2024-07-25 16:15:07,808 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=57.7 pTM=0.529 ipTM=0.265 tol=5.97
2024-07-25 16:15:34,025 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=58 pTM=0.531 ipTM=0.299 tol=3.64
2024-07-25 16:16:00,224 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=58.1 pTM=0.533 ipTM=0.264 tol=3.29
2024-07-25 16:16:26,428 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=58.1 pTM=0.535 ipTM=0.294 tol=5.61
2024-07-25 16:16:52,646 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=58.1 pTM=0.53 ipTM=0.266 tol=5.76
2024-07-25 16:17:18,846 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=58 pTM=0.53 ipTM=0.311 tol=7.09
2024-07-25 16:17:45,041 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=57.9 pTM=0.53 ipTM=0.269 tol=5.17
2024-07-25 16:18:11,221 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=58.2 pTM=0.535 ipTM=0.302 tol=3.84
2024-07-25 16:18:37,397 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=57.8 pTM=0.529 ipTM=0.256 tol=7.94
2024-07-25 16:19:03,606 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=57.9 pTM=0.528 ipTM=0.298 tol=5.96
2024-07-25 16:19:29,819 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=58.6 pTM=0.54 ipTM=0.359 tol=6.82
2024-07-25 16:19:55,999 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=58.5 pTM=0.534 ipTM=0.308 tol=4.39
2024-07-25 16:20:22,213 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=58 pTM=0.53 ipTM=0.274 tol=5.66
2024-07-25 16:20:48,426 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=58.2 pTM=0.531 ipTM=0.3 tol=5.36
2024-07-25 16:21:14,627 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=58.4 pTM=0.534 ipTM=0.27 tol=3.92
2024-07-25 16:21:40,842 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=58.4 pTM=0.531 ipTM=0.312 tol=5.65
2024-07-25 16:22:07,065 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=58.3 pTM=0.531 ipTM=0.271 tol=2.74
2024-07-25 16:22:33,287 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=58.2 pTM=0.532 ipTM=0.287 tol=2.53
2024-07-25 16:22:59,523 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=58.2 pTM=0.53 ipTM=0.266 tol=2.91
2024-07-25 16:23:25,776 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=58.3 pTM=0.531 ipTM=0.302 tol=2.54
2024-07-25 16:23:52,024 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=58.1 pTM=0.529 ipTM=0.267 tol=2.49
2024-07-25 16:24:18,251 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=58.1 pTM=0.531 ipTM=0.302 tol=2.46
2024-07-25 16:24:44,504 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=58.2 pTM=0.531 ipTM=0.267 tol=3.09
2024-07-25 16:25:10,755 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=58.1 pTM=0.53 ipTM=0.306 tol=3.29
2024-07-25 16:25:10,756 alphafold2_multimer_v3_model_2_seed_000 took 812.9s (30 recycles)
2024-07-25 16:25:37,788 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=56.8 pTM=0.513 ipTM=0.36
2024-07-25 16:26:04,099 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=58.9 pTM=0.528 ipTM=0.317 tol=11.3
2024-07-25 16:26:30,434 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=57.3 pTM=0.516 ipTM=0.267 tol=13.1
2024-07-25 16:26:56,768 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=57.2 pTM=0.521 ipTM=0.24 tol=13.2
2024-07-25 16:27:23,088 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=57.8 pTM=0.519 ipTM=0.275 tol=13.9
2024-07-25 16:27:49,400 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=57.5 pTM=0.522 ipTM=0.274 tol=6.36
2024-07-25 16:28:15,723 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=57.6 pTM=0.522 ipTM=0.264 tol=3.92
2024-07-25 16:28:42,060 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=57.9 pTM=0.529 ipTM=0.276 tol=7.21
2024-07-25 16:29:08,406 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=57.5 pTM=0.52 ipTM=0.26 tol=4.09
2024-07-25 16:29:34,711 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=58 pTM=0.526 ipTM=0.271 tol=6.64
2024-07-25 16:30:01,032 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=57.8 pTM=0.527 ipTM=0.275 tol=4.52
2024-07-25 16:30:27,333 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=58.3 pTM=0.533 ipTM=0.279 tol=2.56
2024-07-25 16:30:53,660 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=57.6 pTM=0.518 ipTM=0.251 tol=4.22
2024-07-25 16:31:19,983 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=57.9 pTM=0.528 ipTM=0.268 tol=6.08
2024-07-25 16:31:46,308 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=58 pTM=0.52 ipTM=0.262 tol=3.87
2024-07-25 16:32:12,626 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=58 pTM=0.53 ipTM=0.274 tol=4.45
2024-07-25 16:32:38,941 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=57.8 pTM=0.521 ipTM=0.251 tol=4.15
2024-07-25 16:33:05,287 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=58.1 pTM=0.525 ipTM=0.269 tol=6.24
2024-07-25 16:33:31,601 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=58.2 pTM=0.521 ipTM=0.262 tol=5.6
2024-07-25 16:33:57,940 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=58.1 pTM=0.525 ipTM=0.285 tol=5.81
2024-07-25 16:34:24,265 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=57.6 pTM=0.521 ipTM=0.264 tol=3.67
2024-07-25 16:34:50,577 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=57.9 pTM=0.527 ipTM=0.264 tol=2.81
2024-07-25 16:35:16,882 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=57.8 pTM=0.521 ipTM=0.26 tol=3.03
2024-07-25 16:35:43,208 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=58.1 pTM=0.525 ipTM=0.257 tol=4.29
2024-07-25 16:36:09,507 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=57.7 pTM=0.522 ipTM=0.255 tol=5.9
2024-07-25 16:36:35,820 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=57.9 pTM=0.526 ipTM=0.276 tol=5.04
2024-07-25 16:37:02,125 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=58 pTM=0.521 ipTM=0.264 tol=4.02
2024-07-25 16:37:28,450 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=57.9 pTM=0.522 ipTM=0.274 tol=4.16
2024-07-25 16:37:54,738 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=58.1 pTM=0.527 ipTM=0.262 tol=4.64
2024-07-25 16:38:21,068 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=57.9 pTM=0.521 ipTM=0.26 tol=4.52
2024-07-25 16:38:47,380 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=58 pTM=0.528 ipTM=0.263 tol=5.11
2024-07-25 16:38:47,381 alphafold2_multimer_v3_model_3_seed_000 took 815.8s (30 recycles)
2024-07-25 16:39:14,417 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=55.5 pTM=0.522 ipTM=0.323
2024-07-25 16:39:40,743 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=56.7 pTM=0.528 ipTM=0.256 tol=11.9
2024-07-25 16:40:07,072 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=57.2 pTM=0.535 ipTM=0.262 tol=11.7
2024-07-25 16:40:33,426 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=57.1 pTM=0.522 ipTM=0.221 tol=11.7
2024-07-25 16:40:59,778 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=56.9 pTM=0.521 ipTM=0.237 tol=9.41
2024-07-25 16:41:26,152 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=57.3 pTM=0.518 ipTM=0.209 tol=7.14
2024-07-25 16:41:52,501 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=57.2 pTM=0.52 ipTM=0.227 tol=6.68
2024-07-25 16:42:18,854 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=57.4 pTM=0.52 ipTM=0.211 tol=4.45
2024-07-25 16:42:45,201 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=57.4 pTM=0.522 ipTM=0.237 tol=6.25
2024-07-25 16:43:11,557 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=57.2 pTM=0.517 ipTM=0.221 tol=6.18
2024-07-25 16:43:37,891 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=57.3 pTM=0.521 ipTM=0.24 tol=5.82
2024-07-25 16:44:04,242 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=57.2 pTM=0.522 ipTM=0.224 tol=4.8
2024-07-25 16:44:30,586 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=57.3 pTM=0.521 ipTM=0.237 tol=6.11
2024-07-25 16:44:56,947 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=57.3 pTM=0.521 ipTM=0.231 tol=4.22
2024-07-25 16:45:23,289 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=57.6 pTM=0.524 ipTM=0.235 tol=6.23
2024-07-25 16:45:49,614 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=57.2 pTM=0.523 ipTM=0.221 tol=4.92
2024-07-25 16:46:15,942 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=57.3 pTM=0.523 ipTM=0.25 tol=3.65
2024-07-25 16:46:42,274 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=57.5 pTM=0.525 ipTM=0.224 tol=8.27
2024-07-25 16:47:08,585 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=57.4 pTM=0.525 ipTM=0.237 tol=3.78
2024-07-25 16:47:34,932 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=57.2 pTM=0.521 ipTM=0.228 tol=6.23
2024-07-25 16:48:01,270 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=57.8 pTM=0.523 ipTM=0.233 tol=7.52
2024-07-25 16:48:27,607 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=57.6 pTM=0.523 ipTM=0.209 tol=7.32
2024-07-25 16:48:53,916 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=57.3 pTM=0.524 ipTM=0.243 tol=7.79
2024-07-25 16:49:20,239 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=57.9 pTM=0.529 ipTM=0.249 tol=7.55
2024-07-25 16:49:46,562 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=58.1 pTM=0.526 ipTM=0.233 tol=9.47
2024-07-25 16:50:12,906 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=57.4 pTM=0.524 ipTM=0.227 tol=7.58
2024-07-25 16:50:39,227 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=57.8 pTM=0.525 ipTM=0.248 tol=10.2
2024-07-25 16:51:05,570 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=57.3 pTM=0.524 ipTM=0.235 tol=11.6
2024-07-25 16:51:31,906 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=57.5 pTM=0.523 ipTM=0.234 tol=9.65
2024-07-25 16:51:58,257 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=57.5 pTM=0.526 ipTM=0.236 tol=7.75
2024-07-25 16:52:24,585 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=57.7 pTM=0.524 ipTM=0.245 tol=8.38
2024-07-25 16:52:24,586 alphafold2_multimer_v3_model_4_seed_000 took 816.4s (30 recycles)
2024-07-25 16:52:51,679 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=56.4 pTM=0.521 ipTM=0.38
2024-07-25 16:53:18,055 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=56.6 pTM=0.523 ipTM=0.265 tol=14.2
2024-07-25 16:53:44,375 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=57.9 pTM=0.532 ipTM=0.405 tol=9.94
2024-07-25 16:54:10,713 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=59.6 pTM=0.539 ipTM=0.501 tol=7.86
2024-07-25 16:54:37,062 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=60.5 pTM=0.554 ipTM=0.621 tol=4.06
2024-07-25 16:55:03,394 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=62.8 pTM=0.581 ipTM=0.757 tol=6.62
2024-07-25 16:55:29,722 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=64.4 pTM=0.613 ipTM=0.812 tol=7.27
2024-07-25 16:55:56,045 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=64.3 pTM=0.612 ipTM=0.806 tol=4.49
2024-07-25 16:56:22,372 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=64.1 pTM=0.608 ipTM=0.803 tol=8.41
2024-07-25 16:56:48,688 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=64.2 pTM=0.612 ipTM=0.813 tol=5.68
2024-07-25 16:57:15,006 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=64.6 pTM=0.616 ipTM=0.803 tol=8.64
2024-07-25 16:57:41,320 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=64.4 pTM=0.612 ipTM=0.802 tol=4.5
2024-07-25 16:58:07,626 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=64.1 pTM=0.608 ipTM=0.795 tol=7.11
2024-07-25 16:58:33,929 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=64.3 pTM=0.61 ipTM=0.796 tol=2.57
2024-07-25 16:59:00,231 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=64.3 pTM=0.609 ipTM=0.793 tol=6.9
2024-07-25 16:59:26,534 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=64.5 pTM=0.613 ipTM=0.802 tol=3.84
2024-07-25 16:59:52,846 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=64.4 pTM=0.61 ipTM=0.799 tol=8.08
2024-07-25 17:00:19,173 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=64.4 pTM=0.61 ipTM=0.802 tol=3.96
2024-07-25 17:00:45,499 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=64.9 pTM=0.617 ipTM=0.806 tol=6.75
2024-07-25 17:01:11,811 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=64.4 pTM=0.611 ipTM=0.801 tol=2.61
2024-07-25 17:01:38,126 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=64.7 pTM=0.613 ipTM=0.801 tol=6.51
2024-07-25 17:02:04,430 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=64.4 pTM=0.611 ipTM=0.802 tol=2.09
2024-07-25 17:02:30,728 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=64.8 pTM=0.615 ipTM=0.801 tol=6.7
2024-07-25 17:02:57,040 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=64.8 pTM=0.613 ipTM=0.804 tol=1.87
2024-07-25 17:03:23,342 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=64.8 pTM=0.616 ipTM=0.803 tol=6.9
2024-07-25 17:03:49,647 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=64.5 pTM=0.611 ipTM=0.798 tol=1.73
2024-07-25 17:04:15,941 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=64.8 pTM=0.616 ipTM=0.802 tol=6.51
2024-07-25 17:04:42,243 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=64.6 pTM=0.615 ipTM=0.802 tol=3.01
2024-07-25 17:05:08,528 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=64.6 pTM=0.615 ipTM=0.793 tol=6.86
2024-07-25 17:05:34,827 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=64.6 pTM=0.614 ipTM=0.8 tol=3.52
2024-07-25 17:06:01,146 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=64.8 pTM=0.619 ipTM=0.801 tol=7.14
2024-07-25 17:06:01,147 alphafold2_multimer_v3_model_5_seed_000 took 815.8s (30 recycles)
2024-07-25 17:06:01,923 reranking models by 'multimer' metric
2024-07-25 17:06:03,278 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-25 17:08:12,755 Relaxation took 130.8s
2024-07-25 17:08:12,755 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=64.8 pTM=0.619 ipTM=0.801
2024-07-25 17:10:37,767 Relaxation took 145.0s
2024-07-25 17:10:37,767 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=58.1 pTM=0.53 ipTM=0.306
2024-07-25 17:12:35,466 Relaxation took 117.7s
2024-07-25 17:12:35,466 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=58.6 pTM=0.534 ipTM=0.288
2024-07-25 17:15:21,245 Relaxation took 165.8s
2024-07-25 17:15:21,245 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=58 pTM=0.528 ipTM=0.263
2024-07-25 17:17:45,738 Relaxation took 144.5s
2024-07-25 17:17:45,738 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=57.7 pTM=0.524 ipTM=0.245
2024-07-25 17:17:48,028 Done