2024-07-25 17:11:16,062 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-25 17:11:16,359 Running on GPU 2024-07-25 17:11:20,031 Found 6 citations for tools or databases 2024-07-25 17:11:20,031 Query 1/1: APEX2_KCTD21 (length 778) 2024-07-25 17:11:25,421 Setting max_seq=508, max_extra_seq=2048 2024-07-25 17:14:04,868 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=66.4 pTM=0.478 ipTM=0.166 2024-07-25 17:14:17,084 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=67.9 pTM=0.476 ipTM=0.163 tol=9.05 2024-07-25 17:14:29,307 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=67.6 pTM=0.478 ipTM=0.179 tol=7.11 2024-07-25 17:14:41,560 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=68.4 pTM=0.476 ipTM=0.157 tol=5.07 2024-07-25 17:14:53,822 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=68.5 pTM=0.478 ipTM=0.162 tol=3.31 2024-07-25 17:15:06,130 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=68.2 pTM=0.476 ipTM=0.162 tol=4.25 2024-07-25 17:15:18,430 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=67.8 pTM=0.48 ipTM=0.172 tol=3.54 2024-07-25 17:15:30,731 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=68.2 pTM=0.479 ipTM=0.159 tol=2.94 2024-07-25 17:15:43,035 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=67.9 pTM=0.479 ipTM=0.159 tol=2.47 2024-07-25 17:15:55,345 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=67.7 pTM=0.479 ipTM=0.165 tol=3.19 2024-07-25 17:16:07,661 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=67.9 pTM=0.48 ipTM=0.161 tol=2.28 2024-07-25 17:16:20,010 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=68.2 pTM=0.477 ipTM=0.157 tol=1.75 2024-07-25 17:16:32,333 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=68.1 pTM=0.477 ipTM=0.15 tol=2.48 2024-07-25 17:16:44,685 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=67.8 pTM=0.478 ipTM=0.153 tol=1.92 2024-07-25 17:16:57,013 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=67.7 pTM=0.48 ipTM=0.16 tol=2.08 2024-07-25 17:17:09,392 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=67.8 pTM=0.479 ipTM=0.158 tol=2.43 2024-07-25 17:17:21,756 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=67.8 pTM=0.481 ipTM=0.16 tol=1.5 2024-07-25 17:17:34,115 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=67.6 pTM=0.48 ipTM=0.16 tol=1.82 2024-07-25 17:17:46,463 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=67.8 pTM=0.48 ipTM=0.161 tol=1.72 2024-07-25 17:17:58,827 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=67.8 pTM=0.479 ipTM=0.156 tol=1.75 2024-07-25 17:18:11,203 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=67.2 pTM=0.481 ipTM=0.175 tol=3.89 2024-07-25 17:18:23,551 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=67.6 pTM=0.479 ipTM=0.156 tol=2.84 2024-07-25 17:18:35,916 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=67.8 pTM=0.478 ipTM=0.155 tol=2.2 2024-07-25 17:18:48,278 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=67.4 pTM=0.479 ipTM=0.159 tol=2.53 2024-07-25 17:19:00,657 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=67.6 pTM=0.479 ipTM=0.156 tol=1.71 2024-07-25 17:19:13,028 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=67.8 pTM=0.479 ipTM=0.153 tol=1.53 2024-07-25 17:19:25,389 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=67.4 pTM=0.479 ipTM=0.158 tol=1.98 2024-07-25 17:19:37,753 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=67.9 pTM=0.479 ipTM=0.159 tol=2.22 2024-07-25 17:19:50,114 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=67.8 pTM=0.48 ipTM=0.167 tol=3.27 2024-07-25 17:20:02,496 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=68 pTM=0.479 ipTM=0.163 tol=2.13 2024-07-25 17:20:14,868 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=68 pTM=0.48 ipTM=0.159 tol=1.81 2024-07-25 17:20:14,868 alphafold2_multimer_v3_model_1_seed_000 took 524.4s (30 recycles) 2024-07-25 17:20:27,639 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=67.8 pTM=0.482 ipTM=0.156 2024-07-25 17:20:40,070 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=69.5 pTM=0.483 ipTM=0.161 tol=7.97 2024-07-25 17:20:52,502 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=68.7 pTM=0.481 ipTM=0.147 tol=4.53 2024-07-25 17:21:04,939 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=68.6 pTM=0.481 ipTM=0.144 tol=3.66 2024-07-25 17:21:17,374 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=69.1 pTM=0.482 ipTM=0.145 tol=2.14 2024-07-25 17:21:29,807 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=69.1 pTM=0.481 ipTM=0.145 tol=1.9 2024-07-25 17:21:42,231 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=69.2 pTM=0.481 ipTM=0.145 tol=1.67 2024-07-25 17:21:54,671 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=69.4 pTM=0.481 ipTM=0.144 tol=0.971 2024-07-25 17:22:07,108 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=69.4 pTM=0.481 ipTM=0.144 tol=1.39 2024-07-25 17:22:19,536 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=69.4 pTM=0.481 ipTM=0.147 tol=2.56 2024-07-25 17:22:31,982 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=69.4 pTM=0.482 ipTM=0.146 tol=1.92 2024-07-25 17:22:44,429 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=69.2 pTM=0.48 ipTM=0.142 tol=1.16 2024-07-25 17:22:56,868 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=69.3 pTM=0.481 ipTM=0.146 tol=2.14 2024-07-25 17:23:09,305 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=69.5 pTM=0.481 ipTM=0.146 tol=0.895 2024-07-25 17:23:21,749 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=69.6 pTM=0.481 ipTM=0.147 tol=1.41 2024-07-25 17:23:34,201 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=69.8 pTM=0.482 ipTM=0.149 tol=1.71 2024-07-25 17:23:46,643 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=69.7 pTM=0.482 ipTM=0.145 tol=1.34 2024-07-25 17:23:59,073 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=69.5 pTM=0.482 ipTM=0.148 tol=1.05 2024-07-25 17:24:11,515 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=69.6 pTM=0.482 ipTM=0.147 tol=0.872 2024-07-25 17:24:23,972 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=69.6 pTM=0.482 ipTM=0.146 tol=2.05 2024-07-25 17:24:36,423 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=69.5 pTM=0.482 ipTM=0.147 tol=1.46 2024-07-25 17:24:48,874 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=69.5 pTM=0.481 ipTM=0.148 tol=1.22 2024-07-25 17:25:01,317 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=69.6 pTM=0.48 ipTM=0.144 tol=1.01 2024-07-25 17:25:13,777 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=69.5 pTM=0.481 ipTM=0.146 tol=1.49 2024-07-25 17:25:26,221 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=69.6 pTM=0.481 ipTM=0.15 tol=1.37 2024-07-25 17:25:38,681 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=69.6 pTM=0.482 ipTM=0.146 tol=2.26 2024-07-25 17:25:51,129 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=69.6 pTM=0.481 ipTM=0.146 tol=1.52 2024-07-25 17:26:03,599 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=69.7 pTM=0.48 ipTM=0.148 tol=1.9 2024-07-25 17:26:16,037 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=69.6 pTM=0.48 ipTM=0.147 tol=2.04 2024-07-25 17:26:28,476 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=69.6 pTM=0.48 ipTM=0.145 tol=1.41 2024-07-25 17:26:40,915 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=69.7 pTM=0.481 ipTM=0.144 tol=2.77 2024-07-25 17:26:40,915 alphafold2_multimer_v3_model_2_seed_000 took 385.7s (30 recycles) 2024-07-25 17:26:53,700 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=67.1 pTM=0.476 ipTM=0.152 2024-07-25 17:27:06,107 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=68.5 pTM=0.479 ipTM=0.277 tol=15 2024-07-25 17:27:18,545 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=67.2 pTM=0.475 ipTM=0.153 tol=7.97 2024-07-25 17:27:31,006 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=67.5 pTM=0.479 ipTM=0.162 tol=10.2 2024-07-25 17:27:43,430 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=68.1 pTM=0.48 ipTM=0.161 tol=6.06 2024-07-25 17:27:55,867 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=68.2 pTM=0.481 ipTM=0.159 tol=2.63 2024-07-25 17:28:08,298 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=68.2 pTM=0.481 ipTM=0.16 tol=3.56 2024-07-25 17:28:20,725 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=68.2 pTM=0.481 ipTM=0.163 tol=3.97 2024-07-25 17:28:33,146 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=68.4 pTM=0.48 ipTM=0.155 tol=3.73 2024-07-25 17:28:45,551 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=68.1 pTM=0.481 ipTM=0.162 tol=2.45 2024-07-25 17:28:57,976 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=68.2 pTM=0.48 ipTM=0.157 tol=2.01 2024-07-25 17:29:10,407 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=68.1 pTM=0.48 ipTM=0.157 tol=1.38 2024-07-25 17:29:22,841 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=68 pTM=0.48 ipTM=0.157 tol=1.32 2024-07-25 17:29:35,246 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=68.1 pTM=0.483 ipTM=0.163 tol=1.5 2024-07-25 17:29:47,666 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=67.8 pTM=0.48 ipTM=0.156 tol=2.64 2024-07-25 17:30:00,075 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=67.7 pTM=0.481 ipTM=0.163 tol=1.9 2024-07-25 17:30:12,490 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=68.1 pTM=0.481 ipTM=0.157 tol=2.61 2024-07-25 17:30:24,892 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=67.8 pTM=0.485 ipTM=0.171 tol=3.15 2024-07-25 17:30:37,293 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=68 pTM=0.481 ipTM=0.16 tol=2.77 2024-07-25 17:30:49,689 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=67.8 pTM=0.485 ipTM=0.173 tol=3.25 2024-07-25 17:31:02,087 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=67.8 pTM=0.48 ipTM=0.158 tol=3.72 2024-07-25 17:31:14,497 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=67.6 pTM=0.484 ipTM=0.17 tol=5.38 2024-07-25 17:31:26,902 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=67.9 pTM=0.482 ipTM=0.165 tol=4.52 2024-07-25 17:31:39,306 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=67.6 pTM=0.485 ipTM=0.173 tol=4.57 2024-07-25 17:31:51,706 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=68 pTM=0.481 ipTM=0.16 tol=5.84 2024-07-25 17:32:04,152 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=67.8 pTM=0.486 ipTM=0.174 tol=6.78 2024-07-25 17:32:16,553 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=67.8 pTM=0.482 ipTM=0.165 tol=3.43 2024-07-25 17:32:28,961 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=67.8 pTM=0.485 ipTM=0.174 tol=2.02 2024-07-25 17:32:41,385 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=67.8 pTM=0.483 ipTM=0.166 tol=2.99 2024-07-25 17:32:53,805 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=67.6 pTM=0.485 ipTM=0.174 tol=2.84 2024-07-25 17:33:06,204 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=67.8 pTM=0.482 ipTM=0.162 tol=2.35 2024-07-25 17:33:06,205 alphafold2_multimer_v3_model_3_seed_000 took 384.9s (30 recycles) 2024-07-25 17:33:18,998 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=66.6 pTM=0.481 ipTM=0.212 2024-07-25 17:33:31,419 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=66.4 pTM=0.488 ipTM=0.182 tol=8 2024-07-25 17:33:43,837 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=65.8 pTM=0.49 ipTM=0.189 tol=8.02 2024-07-25 17:33:56,268 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=66.4 pTM=0.486 ipTM=0.17 tol=4.79 2024-07-25 17:34:08,678 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=66.6 pTM=0.487 ipTM=0.177 tol=1.94 2024-07-25 17:34:21,102 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=66.4 pTM=0.486 ipTM=0.172 tol=2.91 2024-07-25 17:34:33,539 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=66.5 pTM=0.487 ipTM=0.178 tol=2.58 2024-07-25 17:34:45,973 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=66.1 pTM=0.484 ipTM=0.172 tol=2.09 2024-07-25 17:34:58,388 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=66.1 pTM=0.485 ipTM=0.175 tol=3.8 2024-07-25 17:35:10,794 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=66.2 pTM=0.484 ipTM=0.169 tol=3.75 2024-07-25 17:35:23,197 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=66.1 pTM=0.484 ipTM=0.171 tol=2.06 2024-07-25 17:35:35,610 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=65.9 pTM=0.484 ipTM=0.168 tol=1.51 2024-07-25 17:35:48,024 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=65.8 pTM=0.485 ipTM=0.173 tol=2.05 2024-07-25 17:36:00,426 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=66 pTM=0.483 ipTM=0.169 tol=1.81 2024-07-25 17:36:12,825 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=66 pTM=0.484 ipTM=0.17 tol=1.48 2024-07-25 17:36:25,236 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=66.3 pTM=0.484 ipTM=0.167 tol=1.41 2024-07-25 17:36:37,641 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=66 pTM=0.484 ipTM=0.168 tol=1.17 2024-07-25 17:36:50,025 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=66.1 pTM=0.484 ipTM=0.167 tol=2.79 2024-07-25 17:37:02,442 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=65.9 pTM=0.484 ipTM=0.171 tol=1.51 2024-07-25 17:37:14,848 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=66.3 pTM=0.483 ipTM=0.165 tol=3.58 2024-07-25 17:37:27,254 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=65.9 pTM=0.485 ipTM=0.17 tol=0.917 2024-07-25 17:37:39,650 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=66 pTM=0.484 ipTM=0.17 tol=3.51 2024-07-25 17:37:52,049 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=66 pTM=0.484 ipTM=0.169 tol=3.38 2024-07-25 17:38:04,462 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=66 pTM=0.484 ipTM=0.17 tol=1.88 2024-07-25 17:38:16,857 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=66.1 pTM=0.484 ipTM=0.168 tol=1.61 2024-07-25 17:38:29,257 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=66.2 pTM=0.483 ipTM=0.165 tol=1.27 2024-07-25 17:38:41,653 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=65.8 pTM=0.484 ipTM=0.17 tol=1.36 2024-07-25 17:38:54,056 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=66.1 pTM=0.484 ipTM=0.171 tol=1.27 2024-07-25 17:39:06,449 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=65.9 pTM=0.483 ipTM=0.171 tol=1.35 2024-07-25 17:39:18,857 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=66.2 pTM=0.483 ipTM=0.167 tol=3.11 2024-07-25 17:39:31,271 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=66.1 pTM=0.484 ipTM=0.169 tol=1.66 2024-07-25 17:39:31,272 alphafold2_multimer_v3_model_4_seed_000 took 384.7s (30 recycles) 2024-07-25 17:39:44,050 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=67.1 pTM=0.485 ipTM=0.168 2024-07-25 17:39:56,489 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=68.5 pTM=0.483 ipTM=0.163 tol=10.6 2024-07-25 17:40:08,928 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=67.9 pTM=0.487 ipTM=0.171 tol=8.73 2024-07-25 17:40:21,370 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=68.6 pTM=0.485 ipTM=0.168 tol=5.36 2024-07-25 17:40:33,796 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=68.1 pTM=0.486 ipTM=0.173 tol=4.12 2024-07-25 17:40:46,228 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=68.1 pTM=0.486 ipTM=0.172 tol=1.97 2024-07-25 17:40:58,655 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=67.9 pTM=0.487 ipTM=0.177 tol=2.23 2024-07-25 17:41:11,064 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=67.8 pTM=0.484 ipTM=0.17 tol=1.36 2024-07-25 17:41:23,489 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=67.7 pTM=0.483 ipTM=0.168 tol=1.38 2024-07-25 17:41:35,901 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=67.8 pTM=0.484 ipTM=0.167 tol=3.01 2024-07-25 17:41:48,321 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=67.8 pTM=0.483 ipTM=0.167 tol=1.14 2024-07-25 17:42:00,738 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=67.5 pTM=0.483 ipTM=0.167 tol=2.54 2024-07-25 17:42:13,154 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=67.4 pTM=0.483 ipTM=0.17 tol=2.92 2024-07-25 17:42:25,565 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=67.5 pTM=0.483 ipTM=0.168 tol=2.79 2024-07-25 17:42:37,980 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=67.1 pTM=0.481 ipTM=0.164 tol=3.3 2024-07-25 17:42:50,398 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=67.4 pTM=0.483 ipTM=0.167 tol=1.39 2024-07-25 17:43:02,809 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=67.4 pTM=0.481 ipTM=0.164 tol=1.06 2024-07-25 17:43:15,212 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=67.2 pTM=0.484 ipTM=0.172 tol=1.2 2024-07-25 17:43:27,624 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=67.4 pTM=0.482 ipTM=0.168 tol=1.11 2024-07-25 17:43:40,033 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=67.5 pTM=0.484 ipTM=0.174 tol=1.06 2024-07-25 17:43:52,438 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=67.2 pTM=0.481 ipTM=0.163 tol=2.63 2024-07-25 17:44:04,846 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=67.6 pTM=0.483 ipTM=0.171 tol=1.13 2024-07-25 17:44:17,244 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=67.4 pTM=0.484 ipTM=0.173 tol=2.88 2024-07-25 17:44:29,645 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=67.3 pTM=0.483 ipTM=0.168 tol=1.02 2024-07-25 17:44:42,030 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=67.2 pTM=0.481 ipTM=0.166 tol=1.36 2024-07-25 17:44:54,426 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=67.6 pTM=0.482 ipTM=0.166 tol=1.27 2024-07-25 17:45:06,838 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=67.2 pTM=0.483 ipTM=0.169 tol=1.02 2024-07-25 17:45:19,234 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=67.6 pTM=0.483 ipTM=0.167 tol=2.61 2024-07-25 17:45:31,636 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=67.2 pTM=0.484 ipTM=0.172 tol=1.46 2024-07-25 17:45:44,035 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=67.4 pTM=0.484 ipTM=0.168 tol=1.19 2024-07-25 17:45:56,434 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=67.4 pTM=0.485 ipTM=0.174 tol=2.49 2024-07-25 17:45:56,435 alphafold2_multimer_v3_model_5_seed_000 took 384.8s (30 recycles) 2024-07-25 17:45:56,819 reranking models by 'multimer' metric 2024-07-25 17:45:59,892 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-25 17:46:28,794 Relaxation took 32.0s 2024-07-25 17:46:28,794 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=67.4 pTM=0.485 ipTM=0.174 2024-07-25 17:47:34,037 Relaxation took 65.2s 2024-07-25 17:47:34,038 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=66.1 pTM=0.484 ipTM=0.169 2024-07-25 17:48:23,177 Relaxation took 49.1s 2024-07-25 17:48:23,177 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=67.8 pTM=0.482 ipTM=0.162 2024-07-25 17:49:00,620 Relaxation took 37.4s 2024-07-25 17:49:00,620 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=68 pTM=0.48 ipTM=0.159 2024-07-25 17:49:52,645 Relaxation took 52.0s 2024-07-25 17:49:52,645 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=69.7 pTM=0.481 ipTM=0.144 2024-07-25 17:49:54,126 Done