2024-07-25 17:17:25,964 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-25 17:17:26,276 Running on GPU
2024-07-25 17:17:26,978 Found 6 citations for tools or databases
2024-07-25 17:17:26,978 Query 1/1: APEX2_SPSB3 (length 873)
2024-07-25 17:17:31,615 Setting max_seq=508, max_extra_seq=2048
2024-07-25 17:20:33,003 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=63.4 pTM=0.447 ipTM=0.152
2024-07-25 17:20:50,124 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=64.5 pTM=0.447 ipTM=0.268 tol=10.7
2024-07-25 17:21:07,307 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=64.8 pTM=0.444 ipTM=0.219 tol=10
2024-07-25 17:21:24,544 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=65.1 pTM=0.449 ipTM=0.243 tol=4.81
2024-07-25 17:21:41,814 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=65.3 pTM=0.448 ipTM=0.242 tol=2.79
2024-07-25 17:21:59,080 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=65.3 pTM=0.449 ipTM=0.25 tol=2.41
2024-07-25 17:22:16,372 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=65.6 pTM=0.45 ipTM=0.25 tol=2.1
2024-07-25 17:22:33,684 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=65.5 pTM=0.452 ipTM=0.249 tol=1.83
2024-07-25 17:22:51,010 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=65.2 pTM=0.449 ipTM=0.239 tol=2.27
2024-07-25 17:23:08,356 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=65.6 pTM=0.452 ipTM=0.244 tol=3.29
2024-07-25 17:23:25,706 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=65.3 pTM=0.449 ipTM=0.249 tol=1.89
2024-07-25 17:23:43,061 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=65.6 pTM=0.452 ipTM=0.247 tol=2.25
2024-07-25 17:24:00,415 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=65.5 pTM=0.454 ipTM=0.271 tol=1.85
2024-07-25 17:24:17,769 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=65.5 pTM=0.453 ipTM=0.26 tol=2.5
2024-07-25 17:24:35,129 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=65.5 pTM=0.455 ipTM=0.268 tol=2.01
2024-07-25 17:24:52,496 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=65.8 pTM=0.452 ipTM=0.273 tol=2.04
2024-07-25 17:25:09,868 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=65.4 pTM=0.448 ipTM=0.272 tol=2.48
2024-07-25 17:25:27,256 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=65.5 pTM=0.451 ipTM=0.259 tol=4.44
2024-07-25 17:25:44,649 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=65.3 pTM=0.449 ipTM=0.253 tol=2.69
2024-07-25 17:26:02,041 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=65.5 pTM=0.449 ipTM=0.204 tol=5.49
2024-07-25 17:26:19,433 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=65.4 pTM=0.449 ipTM=0.234 tol=7.38
2024-07-25 17:26:36,814 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=65.5 pTM=0.453 ipTM=0.253 tol=3.36
2024-07-25 17:26:54,202 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=65.3 pTM=0.451 ipTM=0.276 tol=5.22
2024-07-25 17:27:11,595 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=65.7 pTM=0.455 ipTM=0.28 tol=4.75
2024-07-25 17:27:28,975 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=65.2 pTM=0.451 ipTM=0.284 tol=4.34
2024-07-25 17:27:46,366 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=65.5 pTM=0.454 ipTM=0.272 tol=3.79
2024-07-25 17:28:03,765 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=65.5 pTM=0.451 ipTM=0.268 tol=3.51
2024-07-25 17:28:21,153 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=65.7 pTM=0.455 ipTM=0.281 tol=3.56
2024-07-25 17:28:38,534 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=65.6 pTM=0.455 ipTM=0.282 tol=3.66
2024-07-25 17:28:55,929 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=65.8 pTM=0.456 ipTM=0.284 tol=4
2024-07-25 17:29:13,314 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=65.6 pTM=0.454 ipTM=0.282 tol=2.32
2024-07-25 17:29:13,315 alphafold2_multimer_v3_model_1_seed_000 took 697.9s (30 recycles)
2024-07-25 17:29:31,154 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=65.5 pTM=0.469 ipTM=0.196
2024-07-25 17:29:48,540 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=66.2 pTM=0.479 ipTM=0.268 tol=8.9
2024-07-25 17:30:05,928 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=65.8 pTM=0.476 ipTM=0.234 tol=3.37
2024-07-25 17:30:23,302 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=66.2 pTM=0.473 ipTM=0.231 tol=2.28
2024-07-25 17:30:40,698 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=66.6 pTM=0.479 ipTM=0.256 tol=2.52
2024-07-25 17:30:58,091 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=66.4 pTM=0.477 ipTM=0.245 tol=1.28
2024-07-25 17:31:15,487 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=66.5 pTM=0.476 ipTM=0.272 tol=1.42
2024-07-25 17:31:32,877 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=66.4 pTM=0.474 ipTM=0.286 tol=1.23
2024-07-25 17:31:50,292 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=66.5 pTM=0.473 ipTM=0.257 tol=2.81
2024-07-25 17:32:07,707 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=66.4 pTM=0.471 ipTM=0.259 tol=2.69
2024-07-25 17:32:25,097 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=66.2 pTM=0.473 ipTM=0.268 tol=1.9
2024-07-25 17:32:42,492 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=66.3 pTM=0.471 ipTM=0.271 tol=2.04
2024-07-25 17:32:59,897 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=66.2 pTM=0.469 ipTM=0.277 tol=1.61
2024-07-25 17:33:17,321 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=66.2 pTM=0.463 ipTM=0.324 tol=6.36
2024-07-25 17:33:34,774 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=66.4 pTM=0.458 ipTM=0.324 tol=3.9
2024-07-25 17:33:52,214 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=66.2 pTM=0.458 ipTM=0.303 tol=5.09
2024-07-25 17:34:09,643 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=66.2 pTM=0.459 ipTM=0.312 tol=4.5
2024-07-25 17:34:27,072 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=66.4 pTM=0.459 ipTM=0.284 tol=2.35
2024-07-25 17:34:44,521 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=66.3 pTM=0.459 ipTM=0.287 tol=3.78
2024-07-25 17:35:01,937 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=66.4 pTM=0.459 ipTM=0.311 tol=3.18
2024-07-25 17:35:19,378 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=66.2 pTM=0.46 ipTM=0.329 tol=2.32
2024-07-25 17:35:36,810 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=66.5 pTM=0.459 ipTM=0.303 tol=3.57
2024-07-25 17:35:54,248 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=66 pTM=0.458 ipTM=0.325 tol=4.87
2024-07-25 17:36:11,657 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=66.3 pTM=0.458 ipTM=0.323 tol=2.37
2024-07-25 17:36:29,084 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=66.1 pTM=0.458 ipTM=0.319 tol=2.37
2024-07-25 17:36:46,496 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=66.1 pTM=0.457 ipTM=0.329 tol=1.92
2024-07-25 17:37:03,926 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=66.2 pTM=0.458 ipTM=0.341 tol=3.67
2024-07-25 17:37:21,347 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=66.2 pTM=0.458 ipTM=0.361 tol=2.76
2024-07-25 17:37:38,766 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=65.9 pTM=0.458 ipTM=0.34 tol=2.01
2024-07-25 17:37:56,173 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=66.3 pTM=0.459 ipTM=0.345 tol=2.04
2024-07-25 17:38:13,609 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=66.1 pTM=0.458 ipTM=0.339 tol=2.36
2024-07-25 17:38:13,610 alphafold2_multimer_v3_model_2_seed_000 took 539.8s (30 recycles)
2024-07-25 17:38:31,561 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=64.6 pTM=0.442 ipTM=0.135
2024-07-25 17:38:49,021 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=65 pTM=0.451 ipTM=0.223 tol=20.9
2024-07-25 17:39:06,476 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=64.8 pTM=0.442 ipTM=0.186 tol=10.9
2024-07-25 17:39:23,931 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=64.8 pTM=0.447 ipTM=0.236 tol=2.7
2024-07-25 17:39:41,378 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=64.8 pTM=0.445 ipTM=0.2 tol=2.5
2024-07-25 17:39:58,841 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=64.7 pTM=0.444 ipTM=0.191 tol=2.44
2024-07-25 17:40:16,293 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=64.7 pTM=0.444 ipTM=0.198 tol=2.33
2024-07-25 17:40:33,738 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=64.7 pTM=0.446 ipTM=0.205 tol=4.19
2024-07-25 17:40:51,204 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=64.8 pTM=0.443 ipTM=0.186 tol=2.32
2024-07-25 17:41:08,700 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=64.8 pTM=0.442 ipTM=0.205 tol=8.37
2024-07-25 17:41:26,161 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=64.8 pTM=0.444 ipTM=0.242 tol=4.68
2024-07-25 17:41:43,625 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=64.8 pTM=0.446 ipTM=0.243 tol=5.75
2024-07-25 17:42:01,062 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=64.8 pTM=0.442 ipTM=0.224 tol=1.97
2024-07-25 17:42:18,499 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=64.9 pTM=0.444 ipTM=0.223 tol=2.56
2024-07-25 17:42:35,954 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=64.8 pTM=0.442 ipTM=0.217 tol=8.38
2024-07-25 17:42:53,395 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=64.9 pTM=0.445 ipTM=0.245 tol=4.49
2024-07-25 17:43:10,848 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=64.8 pTM=0.444 ipTM=0.233 tol=6.29
2024-07-25 17:43:28,306 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=64.9 pTM=0.445 ipTM=0.239 tol=3.16
2024-07-25 17:43:45,745 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=64.8 pTM=0.446 ipTM=0.245 tol=4.09
2024-07-25 17:44:03,218 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=64.9 pTM=0.443 ipTM=0.239 tol=3.69
2024-07-25 17:44:20,665 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=64.8 pTM=0.447 ipTM=0.24 tol=3.45
2024-07-25 17:44:38,125 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=64.8 pTM=0.443 ipTM=0.231 tol=7.99
2024-07-25 17:44:55,596 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=64.6 pTM=0.446 ipTM=0.251 tol=5.93
2024-07-25 17:45:13,067 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=64.8 pTM=0.445 ipTM=0.241 tol=3.19
2024-07-25 17:45:30,529 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=64.8 pTM=0.446 ipTM=0.238 tol=4.25
2024-07-25 17:45:47,980 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=64.7 pTM=0.444 ipTM=0.245 tol=5.55
2024-07-25 17:46:05,448 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=64.7 pTM=0.444 ipTM=0.233 tol=3.15
2024-07-25 17:46:22,904 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=64.8 pTM=0.446 ipTM=0.25 tol=2.5
2024-07-25 17:46:40,353 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=64.8 pTM=0.446 ipTM=0.24 tol=3.6
2024-07-25 17:46:57,826 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=64.9 pTM=0.445 ipTM=0.235 tol=2.32
2024-07-25 17:47:15,278 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=64.6 pTM=0.446 ipTM=0.247 tol=2.37
2024-07-25 17:47:15,279 alphafold2_multimer_v3_model_3_seed_000 took 541.2s (30 recycles)
2024-07-25 17:47:33,121 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=64.4 pTM=0.447 ipTM=0.155
2024-07-25 17:47:50,513 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=64.6 pTM=0.462 ipTM=0.188 tol=10.5
2024-07-25 17:48:07,914 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=64.2 pTM=0.472 ipTM=0.216 tol=4.43
2024-07-25 17:48:25,306 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=64 pTM=0.463 ipTM=0.195 tol=5.86
2024-07-25 17:48:42,704 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=64.2 pTM=0.467 ipTM=0.202 tol=3.83
2024-07-25 17:49:00,110 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=64.1 pTM=0.467 ipTM=0.202 tol=4.21
2024-07-25 17:49:17,511 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=64.2 pTM=0.474 ipTM=0.217 tol=2.87
2024-07-25 17:49:34,926 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=64.2 pTM=0.467 ipTM=0.201 tol=2.12
2024-07-25 17:49:52,328 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=64.4 pTM=0.471 ipTM=0.212 tol=2.56
2024-07-25 17:50:09,741 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=64.4 pTM=0.467 ipTM=0.202 tol=3.39
2024-07-25 17:50:27,157 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=64.2 pTM=0.472 ipTM=0.212 tol=2.74
2024-07-25 17:50:44,586 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=64.3 pTM=0.468 ipTM=0.203 tol=2.61
2024-07-25 17:51:01,999 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=64.2 pTM=0.472 ipTM=0.214 tol=1.21
2024-07-25 17:51:19,421 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=64.4 pTM=0.468 ipTM=0.204 tol=1.29
2024-07-25 17:51:36,843 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=64.4 pTM=0.471 ipTM=0.212 tol=1.69
2024-07-25 17:51:54,256 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=64.2 pTM=0.468 ipTM=0.204 tol=1.7
2024-07-25 17:52:11,664 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=64.3 pTM=0.469 ipTM=0.208 tol=1.65
2024-07-25 17:52:29,077 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=64.3 pTM=0.469 ipTM=0.206 tol=1.1
2024-07-25 17:52:46,482 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=64.2 pTM=0.47 ipTM=0.208 tol=1.35
2024-07-25 17:53:03,878 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=64.2 pTM=0.469 ipTM=0.205 tol=2.16
2024-07-25 17:53:21,274 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=64.2 pTM=0.469 ipTM=0.205 tol=2.41
2024-07-25 17:53:38,652 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=64.2 pTM=0.47 ipTM=0.208 tol=2
2024-07-25 17:53:56,046 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=64 pTM=0.471 ipTM=0.207 tol=2.37
2024-07-25 17:54:13,446 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=64.4 pTM=0.475 ipTM=0.218 tol=1.38
2024-07-25 17:54:30,823 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=64.2 pTM=0.467 ipTM=0.199 tol=2.85
2024-07-25 17:54:48,207 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=64.1 pTM=0.473 ipTM=0.213 tol=2.44
2024-07-25 17:55:05,582 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=64.2 pTM=0.467 ipTM=0.2 tol=1.67
2024-07-25 17:55:22,966 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=64.2 pTM=0.469 ipTM=0.205 tol=2.59
2024-07-25 17:55:40,342 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=64.3 pTM=0.464 ipTM=0.195 tol=2.51
2024-07-25 17:55:57,721 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=64.2 pTM=0.474 ipTM=0.229 tol=2.32
2024-07-25 17:56:15,115 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=64.2 pTM=0.468 ipTM=0.202 tol=1.68
2024-07-25 17:56:15,116 alphafold2_multimer_v3_model_4_seed_000 took 539.3s (30 recycles)
2024-07-25 17:56:33,005 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=64.4 pTM=0.438 ipTM=0.133
2024-07-25 17:56:50,482 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=65.4 pTM=0.442 ipTM=0.187 tol=13
2024-07-25 17:57:07,945 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=65.2 pTM=0.444 ipTM=0.186 tol=7.57
2024-07-25 17:57:25,408 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=65.2 pTM=0.443 ipTM=0.232 tol=7.16
2024-07-25 17:57:42,868 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=65.5 pTM=0.445 ipTM=0.233 tol=3.58
2024-07-25 17:58:00,319 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=65.2 pTM=0.445 ipTM=0.228 tol=3.98
2024-07-25 17:58:17,756 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=65.2 pTM=0.449 ipTM=0.219 tol=6.84
2024-07-25 17:58:35,209 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=65.5 pTM=0.446 ipTM=0.234 tol=3.94
2024-07-25 17:58:52,651 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=65.4 pTM=0.443 ipTM=0.206 tol=4.95
2024-07-25 17:59:10,114 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=65.2 pTM=0.442 ipTM=0.206 tol=2.18
2024-07-25 17:59:27,552 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=65.1 pTM=0.444 ipTM=0.188 tol=2.07
2024-07-25 17:59:45,016 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=65.2 pTM=0.444 ipTM=0.175 tol=3.96
2024-07-25 18:00:02,479 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=65.2 pTM=0.444 ipTM=0.184 tol=2.95
2024-07-25 18:00:19,924 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=65.2 pTM=0.444 ipTM=0.189 tol=4.94
2024-07-25 18:00:37,370 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=65.2 pTM=0.446 ipTM=0.21 tol=4.23
2024-07-25 18:00:54,809 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=65.2 pTM=0.444 ipTM=0.206 tol=2.96
2024-07-25 18:01:12,263 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=65.1 pTM=0.446 ipTM=0.219 tol=2.8
2024-07-25 18:01:29,715 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=65.2 pTM=0.448 ipTM=0.215 tol=4.75
2024-07-25 18:01:47,168 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=65.1 pTM=0.446 ipTM=0.232 tol=2.58
2024-07-25 18:02:04,624 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=65.2 pTM=0.445 ipTM=0.22 tol=2.26
2024-07-25 18:02:22,063 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=65.2 pTM=0.446 ipTM=0.219 tol=2.53
2024-07-25 18:02:39,525 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=65.2 pTM=0.446 ipTM=0.203 tol=4.3
2024-07-25 18:02:56,979 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=65.2 pTM=0.448 ipTM=0.219 tol=3.36
2024-07-25 18:03:14,438 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=65.2 pTM=0.446 ipTM=0.215 tol=1.91
2024-07-25 18:03:31,885 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=65.2 pTM=0.447 ipTM=0.2 tol=2.15
2024-07-25 18:03:49,346 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=65.2 pTM=0.451 ipTM=0.212 tol=5.34
2024-07-25 18:04:06,817 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=65.6 pTM=0.448 ipTM=0.214 tol=3.41
2024-07-25 18:04:24,284 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=65.3 pTM=0.446 ipTM=0.214 tol=4.37
2024-07-25 18:04:41,743 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=65.1 pTM=0.446 ipTM=0.221 tol=2.36
2024-07-25 18:04:59,214 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=65.3 pTM=0.445 ipTM=0.204 tol=3.05
2024-07-25 18:05:16,668 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=65.1 pTM=0.446 ipTM=0.221 tol=5.35
2024-07-25 18:05:16,668 alphafold2_multimer_v3_model_5_seed_000 took 541.1s (30 recycles)
2024-07-25 18:05:17,150 reranking models by 'multimer' metric
2024-07-25 18:05:20,320 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-25 18:06:25,179 Relaxation took 68.0s
2024-07-25 18:06:25,179 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=66.1 pTM=0.458 ipTM=0.339
2024-07-25 18:07:36,686 Relaxation took 71.5s
2024-07-25 18:07:36,686 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=65.6 pTM=0.454 ipTM=0.282
2024-07-25 18:08:40,387 Relaxation took 63.7s
2024-07-25 18:08:40,387 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=64.6 pTM=0.446 ipTM=0.247
2024-07-25 18:09:47,923 Relaxation took 67.5s
2024-07-25 18:09:47,923 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=65.1 pTM=0.446 ipTM=0.221
2024-07-25 18:10:53,820 Relaxation took 65.9s
2024-07-25 18:10:53,820 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=64.2 pTM=0.468 ipTM=0.202
2024-07-25 18:10:55,423 Done