2024-07-25 20:55:23,569 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-25 20:55:23,884 Running on GPU 2024-07-25 20:55:27,692 Found 6 citations for tools or databases 2024-07-25 20:55:27,692 Query 1/1: ATF6B_LZTR1 (length 1543) 2024-07-25 20:55:39,046 Setting max_seq=508, max_extra_seq=2048 2024-07-25 20:59:34,375 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=55.4 pTM=0.482 ipTM=0.191 2024-07-25 21:00:45,330 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=55.8 pTM=0.449 ipTM=0.203 tol=13.6 2024-07-25 21:01:56,374 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=55.7 pTM=0.446 ipTM=0.222 tol=10.1 2024-07-25 21:03:07,532 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=55.1 pTM=0.436 ipTM=0.227 tol=7.43 2024-07-25 21:04:18,665 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=55 pTM=0.434 ipTM=0.231 tol=6.96 2024-07-25 21:05:29,768 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=55.1 pTM=0.434 ipTM=0.219 tol=5.98 2024-07-25 21:06:40,937 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=55.3 pTM=0.432 ipTM=0.211 tol=4.89 2024-07-25 21:07:52,200 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=55.3 pTM=0.433 ipTM=0.21 tol=3.57 2024-07-25 21:09:03,493 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=55 pTM=0.431 ipTM=0.211 tol=4.93 2024-07-25 21:10:14,638 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=54.8 pTM=0.427 ipTM=0.213 tol=3.31 2024-07-25 21:11:25,811 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=55.3 pTM=0.429 ipTM=0.249 tol=3.98 2024-07-25 21:12:37,022 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=55.2 pTM=0.425 ipTM=0.246 tol=2.51 2024-07-25 21:13:48,241 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=55.2 pTM=0.432 ipTM=0.262 tol=2.77 2024-07-25 21:14:59,456 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=55.2 pTM=0.431 ipTM=0.254 tol=4.64 2024-07-25 21:16:10,690 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=55.3 pTM=0.432 ipTM=0.256 tol=2.29 2024-07-25 21:17:21,885 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=55.2 pTM=0.429 ipTM=0.236 tol=5.54 2024-07-25 21:18:33,091 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=55.2 pTM=0.432 ipTM=0.253 tol=5.41 2024-07-25 21:19:44,262 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=54.8 pTM=0.431 ipTM=0.254 tol=5.17 2024-07-25 21:20:55,353 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=55.1 pTM=0.434 ipTM=0.27 tol=3.64 2024-07-25 21:22:06,479 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=55.3 pTM=0.439 ipTM=0.237 tol=5.5 2024-07-25 21:23:17,745 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=55.5 pTM=0.436 ipTM=0.226 tol=4.77 2024-07-25 21:24:28,905 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=55.3 pTM=0.432 ipTM=0.24 tol=6.48 2024-07-25 21:25:40,064 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=54.9 pTM=0.43 ipTM=0.242 tol=5.17 2024-07-25 21:26:51,238 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=55.1 pTM=0.432 ipTM=0.233 tol=6.38 2024-07-25 21:28:02,409 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=55 pTM=0.433 ipTM=0.229 tol=5.56 2024-07-25 21:29:13,563 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=55.2 pTM=0.432 ipTM=0.226 tol=3.01 2024-07-25 21:30:24,767 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=55.4 pTM=0.436 ipTM=0.235 tol=2.05 2024-07-25 21:31:35,938 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=55.5 pTM=0.434 ipTM=0.242 tol=2.23 2024-07-25 21:32:47,116 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=55.6 pTM=0.44 ipTM=0.306 tol=4.33 2024-07-25 21:33:58,258 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=55.5 pTM=0.438 ipTM=0.258 tol=4.63 2024-07-25 21:35:09,517 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=55.1 pTM=0.437 ipTM=0.248 tol=4 2024-07-25 21:35:09,518 alphafold2_multimer_v3_model_1_seed_000 took 2365.2s (30 recycles) 2024-07-25 21:36:22,124 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=55 pTM=0.468 ipTM=0.187 2024-07-25 21:37:33,303 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=55.6 pTM=0.466 ipTM=0.229 tol=13.2 2024-07-25 21:38:44,558 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=56.1 pTM=0.471 ipTM=0.229 tol=8.22 2024-07-25 21:39:55,769 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=55.9 pTM=0.459 ipTM=0.219 tol=7.43 2024-07-25 21:41:07,013 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=56.3 pTM=0.466 ipTM=0.217 tol=9.13 2024-07-25 21:42:18,229 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=56.4 pTM=0.477 ipTM=0.219 tol=6.3 2024-07-25 21:43:29,564 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=56.3 pTM=0.47 ipTM=0.212 tol=6.12 2024-07-25 21:44:40,853 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=56.4 pTM=0.468 ipTM=0.21 tol=5.21 2024-07-25 21:45:52,115 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=56.6 pTM=0.464 ipTM=0.217 tol=6.52 2024-07-25 21:47:03,393 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=56.3 pTM=0.458 ipTM=0.219 tol=3.77 2024-07-25 21:48:14,611 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=56.4 pTM=0.468 ipTM=0.212 tol=6.84 2024-07-25 21:49:25,848 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=56.4 pTM=0.47 ipTM=0.212 tol=2.89 2024-07-25 21:50:37,113 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=56.6 pTM=0.471 ipTM=0.211 tol=7.48 2024-07-25 21:51:48,408 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=56.3 pTM=0.465 ipTM=0.219 tol=4.52 2024-07-25 21:52:59,713 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=56.3 pTM=0.467 ipTM=0.228 tol=3.54 2024-07-25 21:54:10,947 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=56.3 pTM=0.464 ipTM=0.234 tol=4.07 2024-07-25 21:55:22,289 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=56.3 pTM=0.463 ipTM=0.237 tol=5.39 2024-07-25 21:56:33,524 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=56.2 pTM=0.467 ipTM=0.233 tol=6.02 2024-07-25 21:57:44,732 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=56.2 pTM=0.469 ipTM=0.238 tol=6.19 2024-07-25 21:58:55,928 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=56.4 pTM=0.471 ipTM=0.229 tol=7.18 2024-07-25 22:00:07,158 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=56.5 pTM=0.475 ipTM=0.228 tol=9.8 2024-07-25 22:01:18,248 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=56.3 pTM=0.469 ipTM=0.223 tol=6.43 2024-07-25 22:02:29,328 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=56.4 pTM=0.477 ipTM=0.227 tol=4.32 2024-07-25 22:03:40,459 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=56.5 pTM=0.468 ipTM=0.226 tol=7.8 2024-07-25 22:04:51,590 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=56.3 pTM=0.474 ipTM=0.225 tol=5.36 2024-07-25 22:06:02,788 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=56.3 pTM=0.471 ipTM=0.229 tol=7.25 2024-07-25 22:07:14,090 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=56.4 pTM=0.477 ipTM=0.242 tol=5.81 2024-07-25 22:08:25,289 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=56.4 pTM=0.467 ipTM=0.237 tol=6.1 2024-07-25 22:09:36,474 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=56.2 pTM=0.469 ipTM=0.227 tol=5.61 2024-07-25 22:10:47,691 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=56.4 pTM=0.467 ipTM=0.228 tol=6.38 2024-07-25 22:11:58,960 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=56.3 pTM=0.47 ipTM=0.233 tol=4.56 2024-07-25 22:11:58,962 alphafold2_multimer_v3_model_2_seed_000 took 2208.0s (30 recycles) 2024-07-25 22:13:11,643 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=53.5 pTM=0.466 ipTM=0.199 2024-07-25 22:14:23,054 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=55.6 pTM=0.468 ipTM=0.222 tol=16.5 2024-07-25 22:15:34,390 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=56.2 pTM=0.478 ipTM=0.225 tol=9.45 2024-07-25 22:16:45,635 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=56 pTM=0.489 ipTM=0.268 tol=9.3 2024-07-25 22:17:56,902 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=56.3 pTM=0.497 ipTM=0.234 tol=4.41 2024-07-25 22:19:08,159 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=56.3 pTM=0.503 ipTM=0.288 tol=5.09 2024-07-25 22:20:19,505 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=56.6 pTM=0.513 ipTM=0.278 tol=10.2 2024-07-25 22:21:30,778 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=56.4 pTM=0.513 ipTM=0.253 tol=5.96 2024-07-25 22:22:42,098 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=56 pTM=0.513 ipTM=0.352 tol=13 2024-07-25 22:23:53,400 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=56.3 pTM=0.518 ipTM=0.29 tol=17 2024-07-25 22:25:04,734 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=56.9 pTM=0.528 ipTM=0.345 tol=7.07 2024-07-25 22:26:16,078 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=56.6 pTM=0.524 ipTM=0.25 tol=4.06 2024-07-25 22:27:27,360 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=56.8 pTM=0.528 ipTM=0.291 tol=3.77 2024-07-25 22:28:38,667 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=57.2 pTM=0.539 ipTM=0.303 tol=4.26 2024-07-25 22:29:49,947 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=56.9 pTM=0.535 ipTM=0.323 tol=4.36 2024-07-25 22:31:01,286 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=56.8 pTM=0.533 ipTM=0.269 tol=4.52 2024-07-25 22:32:12,626 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=57 pTM=0.539 ipTM=0.302 tol=2.7 2024-07-25 22:33:23,855 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=57.2 pTM=0.543 ipTM=0.309 tol=3.59 2024-07-25 22:34:35,022 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=57.1 pTM=0.539 ipTM=0.324 tol=3.98 2024-07-25 22:35:46,307 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=57 pTM=0.54 ipTM=0.261 tol=2.4 2024-07-25 22:36:57,569 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=57.2 pTM=0.546 ipTM=0.315 tol=2.13 2024-07-25 22:38:08,798 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=57.3 pTM=0.549 ipTM=0.369 tol=2.49 2024-07-25 22:39:20,123 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=57 pTM=0.539 ipTM=0.249 tol=6.2 2024-07-25 22:40:31,396 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=56.9 pTM=0.54 ipTM=0.309 tol=7.55 2024-07-25 22:41:42,703 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=56.6 pTM=0.533 ipTM=0.26 tol=5.64 2024-07-25 22:42:54,101 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=56.8 pTM=0.531 ipTM=0.27 tol=5.65 2024-07-25 22:44:05,437 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=57 pTM=0.537 ipTM=0.284 tol=2.58 2024-07-25 22:45:16,707 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=57.3 pTM=0.546 ipTM=0.343 tol=10.7 2024-07-25 22:46:27,901 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=57.3 pTM=0.544 ipTM=0.306 tol=4 2024-07-25 22:47:39,165 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=57 pTM=0.539 ipTM=0.297 tol=2.51 2024-07-25 22:48:50,414 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=57.2 pTM=0.542 ipTM=0.31 tol=1.97 2024-07-25 22:48:50,415 alphafold2_multimer_v3_model_3_seed_000 took 2210.0s (30 recycles) 2024-07-25 22:50:03,476 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=53.9 pTM=0.496 ipTM=0.211 2024-07-25 22:51:15,086 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=54.1 pTM=0.465 ipTM=0.272 tol=16.3 2024-07-25 22:52:26,717 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=53.8 pTM=0.456 ipTM=0.226 tol=18.9 2024-07-25 22:53:38,428 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=53.9 pTM=0.451 ipTM=0.236 tol=14.6 2024-07-25 22:54:50,040 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=54.2 pTM=0.463 ipTM=0.288 tol=11.9 2024-07-25 22:56:01,629 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=54.7 pTM=0.48 ipTM=0.251 tol=9.08 2024-07-25 22:57:13,172 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=54.7 pTM=0.473 ipTM=0.329 tol=8.72 2024-07-25 22:58:24,731 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=54.8 pTM=0.468 ipTM=0.304 tol=5.34 2024-07-25 22:59:36,230 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=54.9 pTM=0.482 ipTM=0.333 tol=14.2 2024-07-25 23:00:47,809 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=54.9 pTM=0.486 ipTM=0.348 tol=9.94 2024-07-25 23:01:59,285 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=54.9 pTM=0.482 ipTM=0.369 tol=12.1 2024-07-25 23:03:10,739 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=54.7 pTM=0.485 ipTM=0.35 tol=8.2 2024-07-25 23:04:22,158 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=54.7 pTM=0.486 ipTM=0.355 tol=12.8 2024-07-25 23:05:33,525 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=54.8 pTM=0.485 ipTM=0.32 tol=8.94 2024-07-25 23:06:45,026 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=54.6 pTM=0.483 ipTM=0.274 tol=8.85 2024-07-25 23:07:56,559 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=54.7 pTM=0.483 ipTM=0.353 tol=6.38 2024-07-25 23:09:08,069 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=55 pTM=0.49 ipTM=0.318 tol=6.7 2024-07-25 23:10:19,554 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=55 pTM=0.493 ipTM=0.346 tol=7.64 2024-07-25 23:11:31,044 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=54.7 pTM=0.489 ipTM=0.309 tol=7.55 2024-07-25 23:12:42,546 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=55.1 pTM=0.504 ipTM=0.302 tol=7.19 2024-07-25 23:13:54,001 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=54.9 pTM=0.5 ipTM=0.303 tol=7 2024-07-25 23:15:05,536 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=54.9 pTM=0.501 ipTM=0.327 tol=6.12 2024-07-25 23:16:17,172 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=54.7 pTM=0.495 ipTM=0.307 tol=6.65 2024-07-25 23:17:28,799 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=54.8 pTM=0.502 ipTM=0.278 tol=5.71 2024-07-25 23:18:40,332 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=54.9 pTM=0.501 ipTM=0.337 tol=10.6 2024-07-25 23:19:51,841 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=54.8 pTM=0.505 ipTM=0.345 tol=10.6 2024-07-25 23:21:03,306 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=55 pTM=0.504 ipTM=0.384 tol=7.27 2024-07-25 23:22:14,851 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=54.7 pTM=0.5 ipTM=0.349 tol=9.8 2024-07-25 23:23:26,320 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=54.8 pTM=0.51 ipTM=0.433 tol=8.9 2024-07-25 23:24:37,782 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=55.1 pTM=0.508 ipTM=0.363 tol=8.67 2024-07-25 23:25:49,204 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=54.8 pTM=0.505 ipTM=0.386 tol=15.4 2024-07-25 23:25:49,205 alphafold2_multimer_v3_model_4_seed_000 took 2217.4s (30 recycles) 2024-07-25 23:27:02,087 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=53.6 pTM=0.454 ipTM=0.215 2024-07-25 23:28:13,526 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=55.1 pTM=0.468 ipTM=0.213 tol=14.2 2024-07-25 23:29:24,928 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=55.7 pTM=0.485 ipTM=0.223 tol=10.6 2024-07-25 23:30:36,374 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=56 pTM=0.494 ipTM=0.239 tol=7.74 2024-07-25 23:31:47,746 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=55.6 pTM=0.473 ipTM=0.242 tol=3.91 2024-07-25 23:32:59,121 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=55.7 pTM=0.486 ipTM=0.223 tol=6.24 2024-07-25 23:34:10,425 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=55.8 pTM=0.477 ipTM=0.295 tol=4.81 2024-07-25 23:35:21,759 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=55.7 pTM=0.483 ipTM=0.244 tol=3.49 2024-07-25 23:36:33,094 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=55.5 pTM=0.476 ipTM=0.219 tol=2.77 2024-07-25 23:37:44,516 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=55.6 pTM=0.477 ipTM=0.316 tol=5 2024-07-25 23:38:55,853 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=55.6 pTM=0.473 ipTM=0.237 tol=3.11 2024-07-25 23:40:07,208 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=55.7 pTM=0.48 ipTM=0.227 tol=4.68 2024-07-25 23:41:18,658 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=55.9 pTM=0.481 ipTM=0.328 tol=3.34 2024-07-25 23:42:30,100 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=55.8 pTM=0.488 ipTM=0.245 tol=2.41 2024-07-25 23:43:41,535 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=55.7 pTM=0.48 ipTM=0.22 tol=5.93 2024-07-25 23:44:52,977 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=55.8 pTM=0.483 ipTM=0.313 tol=2.69 2024-07-25 23:46:04,367 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=55.6 pTM=0.479 ipTM=0.241 tol=2.82 2024-07-25 23:47:15,721 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=55.8 pTM=0.487 ipTM=0.221 tol=2.37 2024-07-25 23:48:27,116 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=55.9 pTM=0.489 ipTM=0.315 tol=1.98 2024-07-25 23:49:38,549 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=56.1 pTM=0.496 ipTM=0.253 tol=4.54 2024-07-25 23:50:49,961 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=56.1 pTM=0.493 ipTM=0.226 tol=2.59 2024-07-25 23:52:01,310 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=56 pTM=0.492 ipTM=0.219 tol=2.37 2024-07-25 23:53:12,682 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=56 pTM=0.488 ipTM=0.285 tol=5.3 2024-07-25 23:54:24,109 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=55.9 pTM=0.493 ipTM=0.24 tol=2.94 2024-07-25 23:55:35,532 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=55.8 pTM=0.487 ipTM=0.234 tol=4.48 2024-07-25 23:56:47,034 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=56.1 pTM=0.496 ipTM=0.302 tol=2.34 2024-07-25 23:57:58,466 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=56.1 pTM=0.49 ipTM=0.243 tol=2.45 2024-07-25 23:59:09,886 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=55.9 pTM=0.491 ipTM=0.223 tol=2.89 2024-07-26 00:00:21,297 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=56.2 pTM=0.49 ipTM=0.314 tol=3.25 2024-07-26 00:01:32,715 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=56.1 pTM=0.497 ipTM=0.242 tol=2.46 2024-07-26 00:02:44,082 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=55.9 pTM=0.49 ipTM=0.22 tol=5.25 2024-07-26 00:02:44,083 alphafold2_multimer_v3_model_5_seed_000 took 2213.5s (30 recycles) 2024-07-26 00:02:45,471 reranking models by 'multimer' metric 2024-07-26 00:02:48,325 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-26 00:06:13,619 Relaxation took 208.1s 2024-07-26 00:06:13,620 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=54.8 pTM=0.505 ipTM=0.386 2024-07-26 00:08:40,048 Relaxation took 146.4s 2024-07-26 00:08:40,048 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=57.2 pTM=0.542 ipTM=0.31 2024-07-26 00:12:04,467 Relaxation took 204.4s 2024-07-26 00:12:04,467 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=55.1 pTM=0.437 ipTM=0.248 2024-07-26 00:15:21,012 Relaxation took 196.5s 2024-07-26 00:15:21,012 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=56.3 pTM=0.47 ipTM=0.233 2024-07-26 00:17:36,216 Relaxation took 135.2s 2024-07-26 00:17:36,217 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=55.9 pTM=0.49 ipTM=0.22 2024-07-26 00:17:39,625 Done