2024-07-25 20:57:10,617 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-25 20:57:10,949 Running on GPU 2024-07-25 20:57:14,458 Found 6 citations for tools or databases 2024-07-25 20:57:14,458 Query 1/1: ATF6B_SPSB3 (length 1058) 2024-07-25 20:57:21,294 Setting max_seq=508, max_extra_seq=2048 2024-07-25 21:00:13,336 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=44.9 pTM=0.357 ipTM=0.185 2024-07-25 21:00:38,235 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=44.6 pTM=0.354 ipTM=0.183 tol=12.6 2024-07-25 21:01:03,239 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=43.9 pTM=0.35 ipTM=0.189 tol=9.17 2024-07-25 21:01:28,346 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=43.5 pTM=0.347 ipTM=0.197 tol=6.17 2024-07-25 21:01:53,538 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=43.6 pTM=0.344 ipTM=0.189 tol=5.36 2024-07-25 21:02:18,731 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=43.8 pTM=0.344 ipTM=0.186 tol=4.62 2024-07-25 21:02:43,942 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=43.9 pTM=0.342 ipTM=0.187 tol=5.49 2024-07-25 21:03:09,180 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=43.6 pTM=0.343 ipTM=0.176 tol=5.04 2024-07-25 21:03:34,430 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=43.8 pTM=0.352 ipTM=0.284 tol=9.37 2024-07-25 21:03:59,715 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=43.4 pTM=0.346 ipTM=0.197 tol=9.67 2024-07-25 21:04:24,978 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=43.5 pTM=0.349 ipTM=0.221 tol=5.49 2024-07-25 21:04:50,263 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=42.9 pTM=0.345 ipTM=0.2 tol=9.8 2024-07-25 21:05:15,562 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=43.4 pTM=0.344 ipTM=0.183 tol=9.46 2024-07-25 21:05:40,824 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=43.3 pTM=0.347 ipTM=0.196 tol=7.71 2024-07-25 21:06:06,141 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=43.3 pTM=0.344 ipTM=0.193 tol=12.5 2024-07-25 21:06:31,430 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=43.3 pTM=0.346 ipTM=0.218 tol=6.24 2024-07-25 21:06:56,721 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=44 pTM=0.345 ipTM=0.213 tol=7.09 2024-07-25 21:07:21,999 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=43.9 pTM=0.345 ipTM=0.221 tol=5.15 2024-07-25 21:07:47,282 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=44 pTM=0.344 ipTM=0.229 tol=2.82 2024-07-25 21:08:12,559 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=44.2 pTM=0.348 ipTM=0.266 tol=2.63 2024-07-25 21:08:37,837 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=44.2 pTM=0.349 ipTM=0.283 tol=2.55 2024-07-25 21:09:03,141 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=44.2 pTM=0.347 ipTM=0.294 tol=5.3 2024-07-25 21:09:28,410 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=44.2 pTM=0.348 ipTM=0.261 tol=4.64 2024-07-25 21:09:53,681 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=44.5 pTM=0.35 ipTM=0.302 tol=3.98 2024-07-25 21:10:18,935 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=44 pTM=0.349 ipTM=0.277 tol=4.16 2024-07-25 21:10:44,200 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=44.3 pTM=0.351 ipTM=0.312 tol=1.4 2024-07-25 21:11:09,473 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=44.2 pTM=0.349 ipTM=0.265 tol=3.75 2024-07-25 21:11:34,756 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=44.3 pTM=0.35 ipTM=0.298 tol=3.8 2024-07-25 21:12:00,061 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=44.2 pTM=0.349 ipTM=0.261 tol=2.53 2024-07-25 21:12:25,349 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=44.2 pTM=0.349 ipTM=0.276 tol=3.74 2024-07-25 21:12:50,655 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=44.2 pTM=0.351 ipTM=0.282 tol=3.5 2024-07-25 21:12:50,656 alphafold2_multimer_v3_model_1_seed_000 took 924.4s (30 recycles) 2024-07-25 21:13:16,535 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=43.7 pTM=0.344 ipTM=0.173 2024-07-25 21:13:41,797 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=43.2 pTM=0.342 ipTM=0.217 tol=16.9 2024-07-25 21:14:07,098 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=42.6 pTM=0.334 ipTM=0.199 tol=10.1 2024-07-25 21:14:32,410 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=42.8 pTM=0.341 ipTM=0.214 tol=5.36 2024-07-25 21:14:57,724 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=42.6 pTM=0.342 ipTM=0.222 tol=11.9 2024-07-25 21:15:23,023 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=43.1 pTM=0.344 ipTM=0.23 tol=7.68 2024-07-25 21:15:48,328 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=43.2 pTM=0.34 ipTM=0.238 tol=8.23 2024-07-25 21:16:13,634 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=43.3 pTM=0.342 ipTM=0.221 tol=5.08 2024-07-25 21:16:38,929 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=44.1 pTM=0.35 ipTM=0.286 tol=7.9 2024-07-25 21:17:04,216 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=43.8 pTM=0.35 ipTM=0.223 tol=7.56 2024-07-25 21:17:29,492 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=43.8 pTM=0.347 ipTM=0.227 tol=4.3 2024-07-25 21:17:54,752 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=43.5 pTM=0.346 ipTM=0.212 tol=2.78 2024-07-25 21:18:20,023 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=43.3 pTM=0.345 ipTM=0.219 tol=6.08 2024-07-25 21:18:45,300 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=43.4 pTM=0.343 ipTM=0.224 tol=5.51 2024-07-25 21:19:10,582 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=43.8 pTM=0.345 ipTM=0.279 tol=7.35 2024-07-25 21:19:35,855 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=43.8 pTM=0.343 ipTM=0.216 tol=4.62 2024-07-25 21:20:01,131 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=43.7 pTM=0.345 ipTM=0.207 tol=4.81 2024-07-25 21:20:26,409 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=43.5 pTM=0.344 ipTM=0.226 tol=2.38 2024-07-25 21:20:51,693 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=43.3 pTM=0.342 ipTM=0.209 tol=4 2024-07-25 21:21:16,999 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=43 pTM=0.344 ipTM=0.257 tol=6.38 2024-07-25 21:21:42,290 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=43.8 pTM=0.341 ipTM=0.225 tol=5.11 2024-07-25 21:22:07,590 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=43.9 pTM=0.343 ipTM=0.26 tol=5.12 2024-07-25 21:22:32,888 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=43.6 pTM=0.341 ipTM=0.219 tol=6.09 2024-07-25 21:22:58,184 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=43.9 pTM=0.347 ipTM=0.227 tol=5.34 2024-07-25 21:23:23,471 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=43.4 pTM=0.348 ipTM=0.224 tol=3.87 2024-07-25 21:23:48,744 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=43.4 pTM=0.355 ipTM=0.268 tol=3.87 2024-07-25 21:24:14,034 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=43.4 pTM=0.346 ipTM=0.216 tol=7.47 2024-07-25 21:24:39,319 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=43.4 pTM=0.345 ipTM=0.22 tol=4.72 2024-07-25 21:25:04,595 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=43.6 pTM=0.349 ipTM=0.227 tol=6.65 2024-07-25 21:25:29,889 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=43.7 pTM=0.349 ipTM=0.223 tol=5.18 2024-07-25 21:25:55,183 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=43.2 pTM=0.348 ipTM=0.22 tol=7.73 2024-07-25 21:25:55,184 alphafold2_multimer_v3_model_2_seed_000 took 783.8s (30 recycles) 2024-07-25 21:26:21,290 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=42 pTM=0.35 ipTM=0.214 2024-07-25 21:26:46,731 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=43.8 pTM=0.349 ipTM=0.262 tol=20.2 2024-07-25 21:27:12,148 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=43.3 pTM=0.344 ipTM=0.265 tol=21.4 2024-07-25 21:27:37,584 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=42.9 pTM=0.343 ipTM=0.232 tol=13.5 2024-07-25 21:28:03,020 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=43.1 pTM=0.343 ipTM=0.315 tol=10.5 2024-07-25 21:28:28,444 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=43.3 pTM=0.343 ipTM=0.283 tol=7.11 2024-07-25 21:28:53,862 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=43.4 pTM=0.345 ipTM=0.341 tol=4.25 2024-07-25 21:29:19,296 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=43.1 pTM=0.343 ipTM=0.213 tol=3.97 2024-07-25 21:29:44,689 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=43.1 pTM=0.344 ipTM=0.279 tol=3.93 2024-07-25 21:30:10,062 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=43.3 pTM=0.347 ipTM=0.298 tol=4.32 2024-07-25 21:30:35,436 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=43.1 pTM=0.344 ipTM=0.288 tol=6.79 2024-07-25 21:31:00,808 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=43 pTM=0.345 ipTM=0.26 tol=6.14 2024-07-25 21:31:26,196 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=42.9 pTM=0.346 ipTM=0.294 tol=6.97 2024-07-25 21:31:51,620 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=43.3 pTM=0.345 ipTM=0.284 tol=6.65 2024-07-25 21:32:17,040 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=43.2 pTM=0.344 ipTM=0.226 tol=5.75 2024-07-25 21:32:42,481 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=43 pTM=0.345 ipTM=0.266 tol=7.4 2024-07-25 21:33:07,942 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=43.2 pTM=0.344 ipTM=0.255 tol=6.46 2024-07-25 21:33:33,381 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=43.1 pTM=0.345 ipTM=0.235 tol=4.41 2024-07-25 21:33:58,839 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=43.2 pTM=0.345 ipTM=0.28 tol=3.13 2024-07-25 21:34:24,309 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=43.2 pTM=0.347 ipTM=0.252 tol=4.27 2024-07-25 21:34:49,782 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=42.8 pTM=0.347 ipTM=0.257 tol=6.68 2024-07-25 21:35:15,258 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=43.3 pTM=0.345 ipTM=0.241 tol=4.82 2024-07-25 21:35:40,724 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=43.1 pTM=0.345 ipTM=0.289 tol=3.13 2024-07-25 21:36:06,207 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=43.3 pTM=0.346 ipTM=0.245 tol=3.83 2024-07-25 21:36:31,681 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=43.1 pTM=0.347 ipTM=0.306 tol=2.65 2024-07-25 21:36:57,163 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=42.8 pTM=0.347 ipTM=0.242 tol=8.92 2024-07-25 21:37:22,651 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=43.2 pTM=0.345 ipTM=0.304 tol=6.38 2024-07-25 21:37:48,112 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=43.3 pTM=0.346 ipTM=0.227 tol=4.02 2024-07-25 21:38:13,588 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=42.9 pTM=0.346 ipTM=0.268 tol=6.82 2024-07-25 21:38:39,077 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=43.5 pTM=0.346 ipTM=0.27 tol=6.54 2024-07-25 21:39:04,556 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=43.3 pTM=0.346 ipTM=0.234 tol=3.85 2024-07-25 21:39:04,557 alphafold2_multimer_v3_model_3_seed_000 took 788.7s (30 recycles) 2024-07-25 21:39:30,716 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=41.2 pTM=0.343 ipTM=0.16 2024-07-25 21:39:56,211 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=42.4 pTM=0.336 ipTM=0.159 tol=16.6 2024-07-25 21:40:21,691 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=42.3 pTM=0.34 ipTM=0.167 tol=7.96 2024-07-25 21:40:47,171 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=42.2 pTM=0.342 ipTM=0.198 tol=6.32 2024-07-25 21:41:12,633 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=42.5 pTM=0.344 ipTM=0.191 tol=8.79 2024-07-25 21:41:38,109 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=42.3 pTM=0.344 ipTM=0.174 tol=6.9 2024-07-25 21:42:03,609 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=42.5 pTM=0.341 ipTM=0.17 tol=5.72 2024-07-25 21:42:29,103 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=42.4 pTM=0.342 ipTM=0.166 tol=3.76 2024-07-25 21:42:54,606 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=42.6 pTM=0.342 ipTM=0.167 tol=3.59 2024-07-25 21:43:20,099 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=42.6 pTM=0.343 ipTM=0.175 tol=7.61 2024-07-25 21:43:45,563 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=42.8 pTM=0.345 ipTM=0.18 tol=9.52 2024-07-25 21:44:11,025 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=42.3 pTM=0.346 ipTM=0.185 tol=4.73 2024-07-25 21:44:36,482 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=42.5 pTM=0.344 ipTM=0.173 tol=3.09 2024-07-25 21:45:01,920 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=42.5 pTM=0.341 ipTM=0.179 tol=4.86 2024-07-25 21:45:27,363 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=42.9 pTM=0.344 ipTM=0.177 tol=6.54 2024-07-25 21:45:52,773 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=42.5 pTM=0.342 ipTM=0.187 tol=6.66 2024-07-25 21:46:18,165 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=42.8 pTM=0.346 ipTM=0.189 tol=8.23 2024-07-25 21:46:43,594 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=42.4 pTM=0.344 ipTM=0.181 tol=6.09 2024-07-25 21:47:09,043 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=42.7 pTM=0.341 ipTM=0.168 tol=4.78 2024-07-25 21:47:34,486 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=42.9 pTM=0.343 ipTM=0.17 tol=3.09 2024-07-25 21:47:59,934 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=42.6 pTM=0.342 ipTM=0.167 tol=5.38 2024-07-25 21:48:25,435 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=42.7 pTM=0.341 ipTM=0.163 tol=6.75 2024-07-25 21:48:50,936 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=42.4 pTM=0.34 ipTM=0.166 tol=3.66 2024-07-25 21:49:16,435 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=42.7 pTM=0.34 ipTM=0.162 tol=2.77 2024-07-25 21:49:41,919 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=42.3 pTM=0.342 ipTM=0.167 tol=3.44 2024-07-25 21:50:07,398 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=42.4 pTM=0.345 ipTM=0.171 tol=3.21 2024-07-25 21:50:32,877 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=42.5 pTM=0.345 ipTM=0.177 tol=3.06 2024-07-25 21:50:58,363 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=42.6 pTM=0.343 ipTM=0.174 tol=4.19 2024-07-25 21:51:23,839 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=42.5 pTM=0.342 ipTM=0.172 tol=5.54 2024-07-25 21:51:49,330 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=42.6 pTM=0.341 ipTM=0.162 tol=6.68 2024-07-25 21:52:14,808 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=42.5 pTM=0.343 ipTM=0.172 tol=4.26 2024-07-25 21:52:14,809 alphafold2_multimer_v3_model_4_seed_000 took 789.6s (30 recycles) 2024-07-25 21:52:40,948 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=43.2 pTM=0.355 ipTM=0.301 2024-07-25 21:53:06,413 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=43.3 pTM=0.345 ipTM=0.273 tol=13.7 2024-07-25 21:53:31,893 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=43 pTM=0.337 ipTM=0.208 tol=10.5 2024-07-25 21:53:57,387 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=42.8 pTM=0.335 ipTM=0.23 tol=6.57 2024-07-25 21:54:22,882 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=42.9 pTM=0.338 ipTM=0.297 tol=9.23 2024-07-25 21:54:48,364 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=43.1 pTM=0.337 ipTM=0.246 tol=5.26 2024-07-25 21:55:13,853 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=43.1 pTM=0.338 ipTM=0.261 tol=7.48 2024-07-25 21:55:39,315 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=42.8 pTM=0.338 ipTM=0.225 tol=7.7 2024-07-25 21:56:04,761 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=43 pTM=0.339 ipTM=0.308 tol=2.8 2024-07-25 21:56:30,196 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=42.8 pTM=0.339 ipTM=0.24 tol=3.07 2024-07-25 21:56:55,631 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=42.9 pTM=0.34 ipTM=0.229 tol=2.26 2024-07-25 21:57:21,063 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=42.8 pTM=0.34 ipTM=0.281 tol=4.57 2024-07-25 21:57:46,513 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=42.8 pTM=0.338 ipTM=0.216 tol=4.68 2024-07-25 21:58:11,979 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=42.9 pTM=0.34 ipTM=0.244 tol=2.63 2024-07-25 21:58:37,425 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=42.9 pTM=0.34 ipTM=0.25 tol=3.45 2024-07-25 21:59:02,893 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=42.8 pTM=0.34 ipTM=0.279 tol=3.34 2024-07-25 21:59:28,359 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=43.1 pTM=0.34 ipTM=0.217 tol=3.93 2024-07-25 21:59:53,828 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=42.9 pTM=0.341 ipTM=0.288 tol=2.99 2024-07-25 22:00:19,291 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=43 pTM=0.339 ipTM=0.211 tol=2.83 2024-07-25 22:00:44,757 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=43.1 pTM=0.342 ipTM=0.312 tol=4.65 2024-07-25 22:01:10,228 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=43.1 pTM=0.341 ipTM=0.302 tol=4.8 2024-07-25 22:01:35,729 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=42.8 pTM=0.338 ipTM=0.202 tol=5.02 2024-07-25 22:02:01,235 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=42.9 pTM=0.34 ipTM=0.262 tol=4.67 2024-07-25 22:02:26,721 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=43 pTM=0.34 ipTM=0.273 tol=2.99 2024-07-25 22:02:52,184 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=42.8 pTM=0.339 ipTM=0.206 tol=2.35 2024-07-25 22:03:17,620 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=42.8 pTM=0.341 ipTM=0.245 tol=4.32 2024-07-25 22:03:43,052 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=42.9 pTM=0.341 ipTM=0.259 tol=4.92 2024-07-25 22:04:08,469 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=42.9 pTM=0.339 ipTM=0.221 tol=4.26 2024-07-25 22:04:33,887 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=42.9 pTM=0.341 ipTM=0.317 tol=3.95 2024-07-25 22:04:59,287 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=42.9 pTM=0.34 ipTM=0.273 tol=4.91 2024-07-25 22:05:24,685 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=42.8 pTM=0.338 ipTM=0.21 tol=3.36 2024-07-25 22:05:24,686 alphafold2_multimer_v3_model_5_seed_000 took 789.2s (30 recycles) 2024-07-25 22:05:25,367 reranking models by 'multimer' metric 2024-07-25 22:05:28,471 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-25 22:06:47,804 Relaxation took 82.4s 2024-07-25 22:06:47,804 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=44.2 pTM=0.351 ipTM=0.282 2024-07-25 22:08:22,970 Relaxation took 95.2s 2024-07-25 22:08:22,971 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=43.3 pTM=0.346 ipTM=0.234 2024-07-25 22:09:52,302 Relaxation took 89.3s 2024-07-25 22:09:52,302 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=43.2 pTM=0.348 ipTM=0.22 2024-07-25 22:11:37,849 Relaxation took 105.5s 2024-07-25 22:11:37,849 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=42.8 pTM=0.338 ipTM=0.21 2024-07-25 22:13:05,926 Relaxation took 88.1s 2024-07-25 22:13:05,927 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=42.5 pTM=0.343 ipTM=0.172 2024-07-25 22:13:08,126 Done