2024-07-26 03:16:20,834 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-26 03:16:21,173 Running on GPU 2024-07-26 03:16:24,587 Found 6 citations for tools or databases 2024-07-26 03:16:24,588 Query 1/1: CDK4_FBXL7 (length 794) 2024-07-26 03:16:30,594 Setting max_seq=508, max_extra_seq=2048 2024-07-26 03:19:11,740 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=72.2 pTM=0.516 ipTM=0.155 2024-07-26 03:19:24,846 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=71.4 pTM=0.514 ipTM=0.154 tol=5.3 2024-07-26 03:19:38,017 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=72.3 pTM=0.511 ipTM=0.147 tol=5.76 2024-07-26 03:19:51,230 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=72.5 pTM=0.511 ipTM=0.139 tol=3.9 2024-07-26 03:20:04,440 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=72.8 pTM=0.509 ipTM=0.139 tol=2.83 2024-07-26 03:20:17,683 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=73.1 pTM=0.511 ipTM=0.139 tol=4.92 2024-07-26 03:20:30,939 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=73 pTM=0.507 ipTM=0.133 tol=3.36 2024-07-26 03:20:44,199 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=73.2 pTM=0.51 ipTM=0.136 tol=3.78 2024-07-26 03:20:57,489 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=72.9 pTM=0.51 ipTM=0.139 tol=3.21 2024-07-26 03:21:10,783 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=73.4 pTM=0.509 ipTM=0.138 tol=2.44 2024-07-26 03:21:24,075 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=73.1 pTM=0.509 ipTM=0.142 tol=2.26 2024-07-26 03:21:37,368 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=73.1 pTM=0.51 ipTM=0.146 tol=1.87 2024-07-26 03:21:50,669 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=72.4 pTM=0.511 ipTM=0.151 tol=2.43 2024-07-26 03:22:03,959 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=72.8 pTM=0.508 ipTM=0.142 tol=2.55 2024-07-26 03:22:17,249 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=72.8 pTM=0.51 ipTM=0.148 tol=1.16 2024-07-26 03:22:30,579 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=72.9 pTM=0.507 ipTM=0.14 tol=1.8 2024-07-26 03:22:43,869 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=72.6 pTM=0.509 ipTM=0.149 tol=1.64 2024-07-26 03:22:57,187 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=73 pTM=0.507 ipTM=0.142 tol=1.57 2024-07-26 03:23:10,506 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=72.4 pTM=0.506 ipTM=0.139 tol=2.93 2024-07-26 03:23:23,828 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=72.8 pTM=0.503 ipTM=0.135 tol=4.98 2024-07-26 03:23:37,140 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=72.4 pTM=0.505 ipTM=0.137 tol=3.82 2024-07-26 03:23:50,465 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=72.8 pTM=0.505 ipTM=0.138 tol=3.12 2024-07-26 03:24:03,780 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=72.4 pTM=0.505 ipTM=0.139 tol=4.04 2024-07-26 03:24:17,088 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=72.8 pTM=0.505 ipTM=0.139 tol=3.2 2024-07-26 03:24:30,432 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=72.8 pTM=0.506 ipTM=0.141 tol=3.3 2024-07-26 03:24:43,739 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=72.9 pTM=0.507 ipTM=0.142 tol=2.83 2024-07-26 03:24:57,056 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=72.9 pTM=0.506 ipTM=0.142 tol=4.38 2024-07-26 03:25:10,411 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=73.2 pTM=0.503 ipTM=0.132 tol=4.06 2024-07-26 03:25:23,713 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=72.6 pTM=0.504 ipTM=0.139 tol=2.82 2024-07-26 03:25:37,056 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=72.8 pTM=0.505 ipTM=0.137 tol=3.03 2024-07-26 03:25:50,373 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=72.6 pTM=0.505 ipTM=0.14 tol=4.13 2024-07-26 03:25:50,373 alphafold2_multimer_v3_model_1_seed_000 took 554.7s (30 recycles) 2024-07-26 03:26:04,143 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=73.1 pTM=0.547 ipTM=0.224 2024-07-26 03:26:17,518 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=74.2 pTM=0.544 ipTM=0.227 tol=7.57 2024-07-26 03:26:30,911 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=73.5 pTM=0.529 ipTM=0.193 tol=10.6 2024-07-26 03:26:44,297 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=73.4 pTM=0.524 ipTM=0.176 tol=5.13 2024-07-26 03:26:57,688 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=73.4 pTM=0.524 ipTM=0.17 tol=8.8 2024-07-26 03:27:11,078 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=73.5 pTM=0.521 ipTM=0.16 tol=7.13 2024-07-26 03:27:24,457 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=73.8 pTM=0.519 ipTM=0.153 tol=6 2024-07-26 03:27:37,873 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=73.7 pTM=0.519 ipTM=0.155 tol=4.94 2024-07-26 03:27:51,280 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=73.9 pTM=0.517 ipTM=0.146 tol=4.91 2024-07-26 03:28:04,685 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=74.1 pTM=0.517 ipTM=0.139 tol=6.34 2024-07-26 03:28:18,111 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=73.9 pTM=0.516 ipTM=0.142 tol=4.38 2024-07-26 03:28:31,503 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=73.8 pTM=0.517 ipTM=0.14 tol=2.82 2024-07-26 03:28:44,910 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=73.8 pTM=0.516 ipTM=0.141 tol=2.55 2024-07-26 03:28:58,326 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=73.9 pTM=0.516 ipTM=0.138 tol=4.48 2024-07-26 03:29:11,721 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=74 pTM=0.518 ipTM=0.146 tol=3.92 2024-07-26 03:29:25,108 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=74.2 pTM=0.52 ipTM=0.155 tol=3.86 2024-07-26 03:29:38,500 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=74 pTM=0.52 ipTM=0.155 tol=2.17 2024-07-26 03:29:51,889 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=74.1 pTM=0.517 ipTM=0.15 tol=2.75 2024-07-26 03:30:05,279 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=73.9 pTM=0.516 ipTM=0.144 tol=3.81 2024-07-26 03:30:18,664 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=73.9 pTM=0.513 ipTM=0.136 tol=8.2 2024-07-26 03:30:32,055 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=73.7 pTM=0.513 ipTM=0.136 tol=6.36 2024-07-26 03:30:45,442 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=74 pTM=0.514 ipTM=0.143 tol=6.02 2024-07-26 03:30:58,814 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=73.8 pTM=0.516 ipTM=0.149 tol=3.52 2024-07-26 03:31:12,197 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=73.8 pTM=0.512 ipTM=0.14 tol=5.95 2024-07-26 03:31:25,581 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=73.8 pTM=0.514 ipTM=0.143 tol=3.51 2024-07-26 03:31:38,957 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=73.8 pTM=0.512 ipTM=0.14 tol=3.88 2024-07-26 03:31:52,349 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=73.8 pTM=0.513 ipTM=0.139 tol=2.27 2024-07-26 03:32:05,726 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=74 pTM=0.512 ipTM=0.142 tol=2.88 2024-07-26 03:32:19,117 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=73.9 pTM=0.518 ipTM=0.154 tol=2.52 2024-07-26 03:32:32,499 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=73.9 pTM=0.513 ipTM=0.139 tol=6.1 2024-07-26 03:32:45,889 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=74.1 pTM=0.518 ipTM=0.152 tol=5.61 2024-07-26 03:32:45,890 alphafold2_multimer_v3_model_2_seed_000 took 415.1s (30 recycles) 2024-07-26 03:32:59,680 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=73.9 pTM=0.565 ipTM=0.29 2024-07-26 03:33:13,071 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=72.6 pTM=0.534 ipTM=0.208 tol=10.6 2024-07-26 03:33:26,466 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=72.7 pTM=0.543 ipTM=0.238 tol=5.05 2024-07-26 03:33:39,865 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=73.4 pTM=0.528 ipTM=0.191 tol=4.41 2024-07-26 03:33:53,225 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=72.9 pTM=0.55 ipTM=0.254 tol=4.25 2024-07-26 03:34:06,630 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=73.3 pTM=0.523 ipTM=0.175 tol=3.18 2024-07-26 03:34:20,014 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=73.4 pTM=0.534 ipTM=0.209 tol=3.44 2024-07-26 03:34:33,395 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=73.5 pTM=0.531 ipTM=0.199 tol=2.72 2024-07-26 03:34:46,767 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=72.8 pTM=0.538 ipTM=0.22 tol=2.42 2024-07-26 03:35:00,155 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=73.2 pTM=0.525 ipTM=0.183 tol=2.8 2024-07-26 03:35:13,532 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=72.9 pTM=0.542 ipTM=0.235 tol=3.24 2024-07-26 03:35:26,921 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=73.3 pTM=0.529 ipTM=0.194 tol=2.72 2024-07-26 03:35:40,288 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=73.1 pTM=0.544 ipTM=0.238 tol=4.6 2024-07-26 03:35:53,677 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=73.4 pTM=0.531 ipTM=0.199 tol=5.84 2024-07-26 03:36:07,051 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=73.1 pTM=0.541 ipTM=0.231 tol=7.28 2024-07-26 03:36:20,444 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=73.4 pTM=0.532 ipTM=0.196 tol=2.81 2024-07-26 03:36:33,827 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=72.9 pTM=0.537 ipTM=0.216 tol=2.59 2024-07-26 03:36:47,222 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=73.2 pTM=0.522 ipTM=0.172 tol=2.19 2024-07-26 03:37:00,623 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=73.1 pTM=0.538 ipTM=0.214 tol=5.2 2024-07-26 03:37:14,012 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=73.2 pTM=0.53 ipTM=0.193 tol=1.57 2024-07-26 03:37:27,383 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=73.1 pTM=0.536 ipTM=0.215 tol=2.47 2024-07-26 03:37:40,751 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=73.2 pTM=0.532 ipTM=0.198 tol=1.82 2024-07-26 03:37:54,136 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=73.1 pTM=0.538 ipTM=0.217 tol=3.25 2024-07-26 03:38:07,505 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=73 pTM=0.533 ipTM=0.206 tol=2.15 2024-07-26 03:38:20,885 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=72.9 pTM=0.535 ipTM=0.208 tol=2.58 2024-07-26 03:38:34,240 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=73.1 pTM=0.535 ipTM=0.209 tol=1.89 2024-07-26 03:38:47,595 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=72.9 pTM=0.535 ipTM=0.211 tol=1.42 2024-07-26 03:39:00,959 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=72.9 pTM=0.528 ipTM=0.196 tol=1.7 2024-07-26 03:39:14,328 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=72.9 pTM=0.534 ipTM=0.206 tol=1.82 2024-07-26 03:39:27,699 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=72.9 pTM=0.531 ipTM=0.195 tol=1.47 2024-07-26 03:39:41,058 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=72.8 pTM=0.535 ipTM=0.205 tol=1.39 2024-07-26 03:39:41,059 alphafold2_multimer_v3_model_3_seed_000 took 414.8s (30 recycles) 2024-07-26 03:39:54,772 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=70.9 pTM=0.514 ipTM=0.145 2024-07-26 03:40:08,140 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=72.9 pTM=0.52 ipTM=0.163 tol=12.2 2024-07-26 03:40:21,538 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=73.2 pTM=0.515 ipTM=0.154 tol=11.8 2024-07-26 03:40:34,937 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=73.1 pTM=0.508 ipTM=0.14 tol=3.58 2024-07-26 03:40:48,319 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=73.2 pTM=0.505 ipTM=0.127 tol=6.37 2024-07-26 03:41:01,698 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=72.9 pTM=0.51 ipTM=0.143 tol=8.74 2024-07-26 03:41:15,084 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=73.8 pTM=0.509 ipTM=0.138 tol=5.36 2024-07-26 03:41:28,452 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=73 pTM=0.517 ipTM=0.157 tol=4.88 2024-07-26 03:41:41,828 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=73.2 pTM=0.519 ipTM=0.159 tol=7.9 2024-07-26 03:41:55,202 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=72.9 pTM=0.522 ipTM=0.173 tol=6.31 2024-07-26 03:42:08,587 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=73.3 pTM=0.519 ipTM=0.164 tol=3.76 2024-07-26 03:42:21,978 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=73.6 pTM=0.516 ipTM=0.152 tol=3.7 2024-07-26 03:42:35,370 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=73.2 pTM=0.521 ipTM=0.165 tol=1.81 2024-07-26 03:42:48,755 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=73.5 pTM=0.517 ipTM=0.158 tol=1.87 2024-07-26 03:43:02,149 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=73 pTM=0.526 ipTM=0.178 tol=3.06 2024-07-26 03:43:15,534 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=73.3 pTM=0.521 ipTM=0.168 tol=2.27 2024-07-26 03:43:28,917 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=73.4 pTM=0.523 ipTM=0.17 tol=3.87 2024-07-26 03:43:42,284 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=72.8 pTM=0.525 ipTM=0.176 tol=2.14 2024-07-26 03:43:55,658 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=73.2 pTM=0.522 ipTM=0.166 tol=2.18 2024-07-26 03:44:09,035 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=73.1 pTM=0.522 ipTM=0.167 tol=2.06 2024-07-26 03:44:22,402 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=73.2 pTM=0.523 ipTM=0.171 tol=2 2024-07-26 03:44:35,793 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=73.6 pTM=0.523 ipTM=0.169 tol=2.22 2024-07-26 03:44:49,184 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=73 pTM=0.527 ipTM=0.181 tol=2.8 2024-07-26 03:45:02,578 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=73.1 pTM=0.519 ipTM=0.161 tol=3.1 2024-07-26 03:45:15,972 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=73.1 pTM=0.522 ipTM=0.167 tol=3.96 2024-07-26 03:45:29,361 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=72.9 pTM=0.522 ipTM=0.171 tol=2.88 2024-07-26 03:45:42,753 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=73.1 pTM=0.522 ipTM=0.166 tol=1.85 2024-07-26 03:45:56,153 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=73.1 pTM=0.521 ipTM=0.166 tol=2.67 2024-07-26 03:46:09,557 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=72.9 pTM=0.526 ipTM=0.178 tol=2.35 2024-07-26 03:46:22,942 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=72.8 pTM=0.522 ipTM=0.167 tol=2.24 2024-07-26 03:46:36,344 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=72.8 pTM=0.523 ipTM=0.168 tol=1.71 2024-07-26 03:46:36,344 alphafold2_multimer_v3_model_4_seed_000 took 414.9s (30 recycles) 2024-07-26 03:46:50,094 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=71.8 pTM=0.529 ipTM=0.18 2024-07-26 03:47:03,497 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=72.8 pTM=0.521 ipTM=0.161 tol=11.5 2024-07-26 03:47:16,894 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=72.9 pTM=0.518 ipTM=0.156 tol=12.5 2024-07-26 03:47:30,283 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=73.2 pTM=0.519 ipTM=0.15 tol=4.34 2024-07-26 03:47:43,678 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=73.4 pTM=0.508 ipTM=0.121 tol=4.7 2024-07-26 03:47:57,052 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=72.6 pTM=0.521 ipTM=0.157 tol=9.73 2024-07-26 03:48:10,458 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=73.5 pTM=0.509 ipTM=0.13 tol=5.8 2024-07-26 03:48:23,894 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=73 pTM=0.514 ipTM=0.143 tol=7.62 2024-07-26 03:48:37,326 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=73.7 pTM=0.51 ipTM=0.134 tol=4.88 2024-07-26 03:48:50,739 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=73.6 pTM=0.515 ipTM=0.144 tol=3.62 2024-07-26 03:49:04,167 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=74 pTM=0.51 ipTM=0.136 tol=5.97 2024-07-26 03:49:17,588 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=73.9 pTM=0.512 ipTM=0.137 tol=3.69 2024-07-26 03:49:31,014 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=73.9 pTM=0.511 ipTM=0.136 tol=4.64 2024-07-26 03:49:44,436 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=73.8 pTM=0.513 ipTM=0.141 tol=4.34 2024-07-26 03:49:57,869 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=73.9 pTM=0.509 ipTM=0.135 tol=2.71 2024-07-26 03:50:11,288 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=73.4 pTM=0.512 ipTM=0.139 tol=4.32 2024-07-26 03:50:24,718 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=73.7 pTM=0.51 ipTM=0.137 tol=5.04 2024-07-26 03:50:38,143 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=73.6 pTM=0.51 ipTM=0.139 tol=5.2 2024-07-26 03:50:51,572 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=73.4 pTM=0.508 ipTM=0.135 tol=4.49 2024-07-26 03:51:04,990 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=73.5 pTM=0.508 ipTM=0.133 tol=4.37 2024-07-26 03:51:18,396 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=73.4 pTM=0.505 ipTM=0.128 tol=3.16 2024-07-26 03:51:31,801 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=73.6 pTM=0.511 ipTM=0.137 tol=5.36 2024-07-26 03:51:45,203 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=73.6 pTM=0.509 ipTM=0.137 tol=6.61 2024-07-26 03:51:58,614 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=73.5 pTM=0.508 ipTM=0.134 tol=3.26 2024-07-26 03:52:12,024 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=73.4 pTM=0.508 ipTM=0.135 tol=4.34 2024-07-26 03:52:25,427 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=73.4 pTM=0.507 ipTM=0.129 tol=9.52 2024-07-26 03:52:38,842 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=73.1 pTM=0.501 ipTM=0.12 tol=9.25 2024-07-26 03:52:52,250 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=73.2 pTM=0.505 ipTM=0.126 tol=4.64 2024-07-26 03:53:05,649 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=73.4 pTM=0.512 ipTM=0.14 tol=6.29 2024-07-26 03:53:19,057 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=73.6 pTM=0.51 ipTM=0.135 tol=6.89 2024-07-26 03:53:32,436 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=73.5 pTM=0.515 ipTM=0.144 tol=2.48 2024-07-26 03:53:32,436 alphafold2_multimer_v3_model_5_seed_000 took 415.7s (30 recycles) 2024-07-26 03:53:32,833 reranking models by 'multimer' metric 2024-07-26 03:53:33,946 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-26 03:54:46,573 Relaxation took 73.7s 2024-07-26 03:54:46,573 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=72.8 pTM=0.535 ipTM=0.205 2024-07-26 03:55:45,671 Relaxation took 59.1s 2024-07-26 03:55:45,671 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=72.8 pTM=0.523 ipTM=0.168 2024-07-26 03:56:59,125 Relaxation took 73.5s 2024-07-26 03:56:59,125 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=74.1 pTM=0.518 ipTM=0.152 2024-07-26 03:58:01,117 Relaxation took 62.0s 2024-07-26 03:58:01,117 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=73.5 pTM=0.515 ipTM=0.144 2024-07-26 03:59:19,211 Relaxation took 78.1s 2024-07-26 03:59:19,211 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=72.6 pTM=0.505 ipTM=0.14 2024-07-26 03:59:20,694 Done