2024-07-26 03:24:51,982 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-26 03:24:52,379 Running on GPU 2024-07-26 03:24:54,840 Found 6 citations for tools or databases 2024-07-26 03:24:54,840 Query 1/1: CDKN1A_FBXO3 (length 635) 2024-07-26 03:24:55,296 Sleeping for 7s. Reason: PENDING 2024-07-26 03:25:02,716 Sleeping for 9s. Reason: RUNNING 2024-07-26 03:25:12,131 Sleeping for 10s. Reason: RUNNING 2024-07-26 03:25:22,568 Sleeping for 6s. Reason: RUNNING 2024-07-26 03:25:29,002 Sleeping for 7s. Reason: RUNNING 2024-07-26 03:25:36,443 Sleeping for 7s. Reason: RUNNING 2024-07-26 03:25:43,864 Sleeping for 9s. Reason: RUNNING 2024-07-26 03:25:53,284 Sleeping for 9s. Reason: RUNNING 2024-07-26 03:26:04,394 Sleeping for 6s. Reason: PENDING 2024-07-26 03:26:10,829 Sleeping for 6s. Reason: RUNNING 2024-07-26 03:26:17,236 Sleeping for 5s. Reason: RUNNING 2024-07-26 03:26:22,669 Sleeping for 8s. Reason: RUNNING 2024-07-26 03:26:31,093 Sleeping for 7s. Reason: RUNNING 2024-07-26 03:26:38,530 Sleeping for 5s. Reason: RUNNING 2024-07-26 03:26:46,942 Setting max_seq=508, max_extra_seq=2048 2024-07-26 03:30:41,828 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=68.4 pTM=0.632 ipTM=0.139 2024-07-26 03:30:52,448 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=68.7 pTM=0.625 ipTM=0.138 tol=6.16 2024-07-26 03:31:03,050 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=68.2 pTM=0.62 ipTM=0.144 tol=4.63 2024-07-26 03:31:13,677 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=68.6 pTM=0.622 ipTM=0.148 tol=3.91 2024-07-26 03:31:24,288 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=68.6 pTM=0.622 ipTM=0.14 tol=1.39 2024-07-26 03:31:34,891 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=68 pTM=0.615 ipTM=0.136 tol=1.73 2024-07-26 03:31:45,513 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=68.2 pTM=0.617 ipTM=0.136 tol=1.73 2024-07-26 03:31:56,161 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=68.2 pTM=0.619 ipTM=0.133 tol=1.5 2024-07-26 03:32:06,775 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=67.7 pTM=0.614 ipTM=0.139 tol=1.29 2024-07-26 03:32:17,409 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=68.3 pTM=0.618 ipTM=0.145 tol=1.63 2024-07-26 03:32:28,035 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=67.8 pTM=0.615 ipTM=0.139 tol=3.89 2024-07-26 03:32:38,671 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=67.4 pTM=0.614 ipTM=0.139 tol=2.26 2024-07-26 03:32:49,303 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=67.8 pTM=0.618 ipTM=0.148 tol=1.61 2024-07-26 03:32:59,957 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=67.9 pTM=0.62 ipTM=0.155 tol=1.62 2024-07-26 03:33:10,622 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=68.3 pTM=0.623 ipTM=0.156 tol=1.61 2024-07-26 03:33:21,268 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=67.8 pTM=0.617 ipTM=0.15 tol=1.28 2024-07-26 03:33:31,936 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=67.9 pTM=0.619 ipTM=0.147 tol=0.999 2024-07-26 03:33:42,595 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=68 pTM=0.62 ipTM=0.147 tol=1.39 2024-07-26 03:33:53,266 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=68.4 pTM=0.622 ipTM=0.152 tol=1.06 2024-07-26 03:34:03,935 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=68.3 pTM=0.623 ipTM=0.152 tol=3.29 2024-07-26 03:34:14,589 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=67.9 pTM=0.62 ipTM=0.153 tol=1.72 2024-07-26 03:34:25,250 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=67.9 pTM=0.621 ipTM=0.15 tol=2.4 2024-07-26 03:34:35,917 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=68.1 pTM=0.623 ipTM=0.15 tol=0.889 2024-07-26 03:34:46,585 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=68.2 pTM=0.623 ipTM=0.153 tol=2.07 2024-07-26 03:34:57,252 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=68.3 pTM=0.626 ipTM=0.15 tol=2.14 2024-07-26 03:35:07,918 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=68.3 pTM=0.625 ipTM=0.16 tol=1.33 2024-07-26 03:35:18,592 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=68.6 pTM=0.625 ipTM=0.148 tol=1.3 2024-07-26 03:35:29,265 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=68.1 pTM=0.623 ipTM=0.141 tol=0.938 2024-07-26 03:35:39,932 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=68.1 pTM=0.623 ipTM=0.142 tol=1.09 2024-07-26 03:35:50,588 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=68 pTM=0.622 ipTM=0.152 tol=0.842 2024-07-26 03:36:01,255 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=67.9 pTM=0.621 ipTM=0.144 tol=0.884 2024-07-26 03:36:01,255 alphafold2_multimer_v3_model_1_seed_000 took 547.5s (30 recycles) 2024-07-26 03:36:12,323 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=67.6 pTM=0.63 ipTM=0.115 2024-07-26 03:36:23,053 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=68.7 pTM=0.635 ipTM=0.149 tol=8.95 2024-07-26 03:36:33,790 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=68.6 pTM=0.634 ipTM=0.144 tol=3.79 2024-07-26 03:36:44,522 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=68.9 pTM=0.635 ipTM=0.147 tol=2.84 2024-07-26 03:36:55,275 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=68.9 pTM=0.635 ipTM=0.143 tol=1.72 2024-07-26 03:37:05,979 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=68.4 pTM=0.628 ipTM=0.141 tol=2.21 2024-07-26 03:37:16,702 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=68.8 pTM=0.631 ipTM=0.141 tol=1.67 2024-07-26 03:37:27,427 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=68.5 pTM=0.631 ipTM=0.142 tol=1.26 2024-07-26 03:37:38,143 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=68.4 pTM=0.629 ipTM=0.137 tol=1.06 2024-07-26 03:37:48,857 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=68.4 pTM=0.632 ipTM=0.146 tol=1.31 2024-07-26 03:37:59,580 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=68.4 pTM=0.627 ipTM=0.133 tol=1.78 2024-07-26 03:38:10,291 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=68.2 pTM=0.628 ipTM=0.14 tol=1.84 2024-07-26 03:38:21,014 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=68.4 pTM=0.627 ipTM=0.129 tol=1.56 2024-07-26 03:38:31,721 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=68.1 pTM=0.625 ipTM=0.132 tol=1.41 2024-07-26 03:38:42,445 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=68.4 pTM=0.629 ipTM=0.136 tol=1.51 2024-07-26 03:38:53,158 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=68.4 pTM=0.628 ipTM=0.137 tol=1.32 2024-07-26 03:39:03,882 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=68.6 pTM=0.631 ipTM=0.142 tol=1.81 2024-07-26 03:39:14,601 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=68.6 pTM=0.633 ipTM=0.145 tol=1.52 2024-07-26 03:39:25,325 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=68.9 pTM=0.635 ipTM=0.148 tol=2.61 2024-07-26 03:39:36,042 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=68.7 pTM=0.633 ipTM=0.144 tol=2.16 2024-07-26 03:39:46,756 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=68.6 pTM=0.632 ipTM=0.148 tol=3.31 2024-07-26 03:39:57,472 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=68.6 pTM=0.631 ipTM=0.141 tol=2.93 2024-07-26 03:40:08,181 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=68.8 pTM=0.633 ipTM=0.151 tol=2.69 2024-07-26 03:40:18,895 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=68.6 pTM=0.635 ipTM=0.158 tol=5.24 2024-07-26 03:40:29,608 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=68.5 pTM=0.633 ipTM=0.15 tol=3.11 2024-07-26 03:40:40,322 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=68.8 pTM=0.632 ipTM=0.147 tol=1.89 2024-07-26 03:40:51,040 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=68.6 pTM=0.63 ipTM=0.136 tol=4.5 2024-07-26 03:41:01,753 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=68.9 pTM=0.631 ipTM=0.139 tol=3.45 2024-07-26 03:41:12,460 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=68.5 pTM=0.629 ipTM=0.135 tol=1.66 2024-07-26 03:41:23,161 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=68.4 pTM=0.628 ipTM=0.138 tol=1.76 2024-07-26 03:41:33,870 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=68.3 pTM=0.628 ipTM=0.135 tol=1.69 2024-07-26 03:41:33,871 alphafold2_multimer_v3_model_2_seed_000 took 332.3s (30 recycles) 2024-07-26 03:41:44,892 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=66.9 pTM=0.63 ipTM=0.21 2024-07-26 03:41:55,622 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=68.2 pTM=0.625 ipTM=0.136 tol=10.5 2024-07-26 03:42:06,339 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=68.2 pTM=0.624 ipTM=0.141 tol=8.27 2024-07-26 03:42:17,063 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=68.8 pTM=0.63 ipTM=0.139 tol=3.03 2024-07-26 03:42:27,781 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=68.7 pTM=0.627 ipTM=0.14 tol=2.51 2024-07-26 03:42:38,485 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=68.2 pTM=0.622 ipTM=0.138 tol=2.26 2024-07-26 03:42:49,194 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=68.8 pTM=0.624 ipTM=0.137 tol=1.96 2024-07-26 03:42:59,916 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=68.8 pTM=0.629 ipTM=0.142 tol=1.89 2024-07-26 03:43:10,631 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=68.7 pTM=0.627 ipTM=0.14 tol=1.93 2024-07-26 03:43:21,333 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=68.6 pTM=0.628 ipTM=0.14 tol=1.82 2024-07-26 03:43:32,037 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=68.5 pTM=0.625 ipTM=0.138 tol=1.74 2024-07-26 03:43:42,738 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=68.6 pTM=0.625 ipTM=0.141 tol=2.67 2024-07-26 03:43:53,457 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=69 pTM=0.629 ipTM=0.138 tol=1.95 2024-07-26 03:44:04,172 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=68.5 pTM=0.625 ipTM=0.137 tol=2.23 2024-07-26 03:44:14,893 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=68.6 pTM=0.628 ipTM=0.141 tol=1.81 2024-07-26 03:44:25,595 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=68.3 pTM=0.624 ipTM=0.137 tol=2.17 2024-07-26 03:44:36,310 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=68.8 pTM=0.627 ipTM=0.141 tol=2.83 2024-07-26 03:44:47,024 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=68.7 pTM=0.628 ipTM=0.136 tol=3.02 2024-07-26 03:44:57,733 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=68.4 pTM=0.626 ipTM=0.136 tol=2.56 2024-07-26 03:45:08,453 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=68.5 pTM=0.628 ipTM=0.14 tol=2.59 2024-07-26 03:45:19,155 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=68.4 pTM=0.625 ipTM=0.139 tol=1.95 2024-07-26 03:45:29,861 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=68.4 pTM=0.625 ipTM=0.136 tol=2.36 2024-07-26 03:45:40,572 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=68.8 pTM=0.628 ipTM=0.141 tol=1.74 2024-07-26 03:45:51,287 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=68.3 pTM=0.625 ipTM=0.136 tol=2.01 2024-07-26 03:46:02,005 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=68.2 pTM=0.625 ipTM=0.137 tol=2.42 2024-07-26 03:46:12,717 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=68.3 pTM=0.624 ipTM=0.137 tol=4.9 2024-07-26 03:46:23,441 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=68.4 pTM=0.625 ipTM=0.133 tol=3.51 2024-07-26 03:46:34,168 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=68.4 pTM=0.625 ipTM=0.131 tol=4.05 2024-07-26 03:46:44,873 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=68 pTM=0.622 ipTM=0.131 tol=2.83 2024-07-26 03:46:55,584 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=67.9 pTM=0.62 ipTM=0.129 tol=2.79 2024-07-26 03:47:06,286 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=68 pTM=0.622 ipTM=0.134 tol=1.59 2024-07-26 03:47:06,286 alphafold2_multimer_v3_model_3_seed_000 took 332.1s (30 recycles) 2024-07-26 03:47:17,367 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=67.4 pTM=0.629 ipTM=0.129 2024-07-26 03:47:28,114 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=67.9 pTM=0.635 ipTM=0.141 tol=7.55 2024-07-26 03:47:38,844 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=67.1 pTM=0.631 ipTM=0.136 tol=5.38 2024-07-26 03:47:49,570 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=67.1 pTM=0.628 ipTM=0.127 tol=2.65 2024-07-26 03:48:00,289 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=66.8 pTM=0.625 ipTM=0.129 tol=2.79 2024-07-26 03:48:11,005 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=66.7 pTM=0.627 ipTM=0.172 tol=11.2 2024-07-26 03:48:21,717 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=67.1 pTM=0.628 ipTM=0.139 tol=5.84 2024-07-26 03:48:32,438 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=67 pTM=0.626 ipTM=0.129 tol=4.7 2024-07-26 03:48:43,145 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=66.9 pTM=0.625 ipTM=0.131 tol=4.41 2024-07-26 03:48:53,863 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=67.2 pTM=0.626 ipTM=0.129 tol=2.73 2024-07-26 03:49:04,579 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=67.1 pTM=0.624 ipTM=0.13 tol=4.68 2024-07-26 03:49:15,294 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=66.9 pTM=0.625 ipTM=0.127 tol=3.27 2024-07-26 03:49:26,027 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=67.2 pTM=0.627 ipTM=0.135 tol=3.87 2024-07-26 03:49:36,734 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=66.8 pTM=0.622 ipTM=0.128 tol=1.79 2024-07-26 03:49:47,462 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=66.7 pTM=0.623 ipTM=0.129 tol=1.91 2024-07-26 03:49:58,173 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=66.9 pTM=0.623 ipTM=0.131 tol=1.87 2024-07-26 03:50:08,895 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=67.1 pTM=0.624 ipTM=0.126 tol=2.08 2024-07-26 03:50:19,627 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=66.9 pTM=0.624 ipTM=0.132 tol=2.1 2024-07-26 03:50:30,354 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=66.9 pTM=0.622 ipTM=0.129 tol=2.9 2024-07-26 03:50:41,078 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=67.1 pTM=0.624 ipTM=0.132 tol=1.54 2024-07-26 03:50:51,803 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=67.2 pTM=0.624 ipTM=0.128 tol=2.52 2024-07-26 03:51:02,523 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=67.4 pTM=0.625 ipTM=0.131 tol=2.05 2024-07-26 03:51:13,249 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=67.5 pTM=0.626 ipTM=0.131 tol=3.47 2024-07-26 03:51:23,970 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=67.2 pTM=0.625 ipTM=0.125 tol=2.81 2024-07-26 03:51:34,703 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=67.6 pTM=0.628 ipTM=0.128 tol=1.78 2024-07-26 03:51:45,581 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=67.2 pTM=0.625 ipTM=0.127 tol=2.86 2024-07-26 03:51:56,308 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=67.4 pTM=0.625 ipTM=0.128 tol=3.07 2024-07-26 03:52:07,022 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=67.2 pTM=0.623 ipTM=0.121 tol=1.59 2024-07-26 03:52:17,732 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=67.2 pTM=0.625 ipTM=0.133 tol=6.13 2024-07-26 03:52:28,459 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=67.2 pTM=0.623 ipTM=0.119 tol=3.35 2024-07-26 03:52:39,171 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=67 pTM=0.623 ipTM=0.122 tol=2.6 2024-07-26 03:52:39,172 alphafold2_multimer_v3_model_4_seed_000 took 332.5s (30 recycles) 2024-07-26 03:52:50,224 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=67.4 pTM=0.668 ipTM=0.426 2024-07-26 03:53:00,954 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=66.6 pTM=0.64 ipTM=0.179 tol=6.98 2024-07-26 03:53:11,681 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=67 pTM=0.633 ipTM=0.153 tol=5.85 2024-07-26 03:53:22,399 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=67.3 pTM=0.661 ipTM=0.341 tol=4.45 2024-07-26 03:53:33,127 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=67.2 pTM=0.661 ipTM=0.292 tol=5.61 2024-07-26 03:53:43,837 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=66.8 pTM=0.649 ipTM=0.234 tol=4.55 2024-07-26 03:53:54,556 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=67.1 pTM=0.649 ipTM=0.225 tol=2 2024-07-26 03:54:05,277 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=66.9 pTM=0.654 ipTM=0.281 tol=2.02 2024-07-26 03:54:15,996 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=66.9 pTM=0.654 ipTM=0.254 tol=2.19 2024-07-26 03:54:26,700 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=67 pTM=0.648 ipTM=0.213 tol=1.57 2024-07-26 03:54:37,394 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=67.4 pTM=0.653 ipTM=0.27 tol=1.73 2024-07-26 03:54:48,089 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=67.1 pTM=0.655 ipTM=0.274 tol=1.72 2024-07-26 03:54:58,808 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=67.4 pTM=0.658 ipTM=0.271 tol=1.57 2024-07-26 03:55:09,504 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=66.8 pTM=0.649 ipTM=0.236 tol=1.68 2024-07-26 03:55:20,230 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=67.1 pTM=0.653 ipTM=0.249 tol=2 2024-07-26 03:55:30,931 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=66.2 pTM=0.645 ipTM=0.216 tol=2.31 2024-07-26 03:55:41,656 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=67.3 pTM=0.648 ipTM=0.208 tol=1.62 2024-07-26 03:55:52,347 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=67.1 pTM=0.659 ipTM=0.293 tol=1.45 2024-07-26 03:56:03,055 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=67.1 pTM=0.659 ipTM=0.277 tol=3.32 2024-07-26 03:56:13,759 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=67.9 pTM=0.669 ipTM=0.314 tol=2.07 2024-07-26 03:56:24,462 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=67 pTM=0.655 ipTM=0.242 tol=3.12 2024-07-26 03:56:35,167 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=67.2 pTM=0.648 ipTM=0.21 tol=2.88 2024-07-26 03:56:45,872 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=66.9 pTM=0.653 ipTM=0.262 tol=1.52 2024-07-26 03:56:56,583 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=66.6 pTM=0.655 ipTM=0.25 tol=1.4 2024-07-26 03:57:07,285 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=67.6 pTM=0.655 ipTM=0.234 tol=1.39 2024-07-26 03:57:17,973 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=66.8 pTM=0.655 ipTM=0.258 tol=1.12 2024-07-26 03:57:28,675 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=67 pTM=0.649 ipTM=0.215 tol=1.08 2024-07-26 03:57:39,379 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=67.2 pTM=0.654 ipTM=0.257 tol=1.32 2024-07-26 03:57:50,080 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=66.6 pTM=0.657 ipTM=0.263 tol=2.11 2024-07-26 03:58:00,766 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=67.3 pTM=0.659 ipTM=0.261 tol=1.31 2024-07-26 03:58:11,464 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=66.6 pTM=0.654 ipTM=0.262 tol=0.958 2024-07-26 03:58:11,464 alphafold2_multimer_v3_model_5_seed_000 took 332.0s (30 recycles) 2024-07-26 03:58:11,798 reranking models by 'multimer' metric 2024-07-26 03:58:12,643 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-26 03:58:54,644 Relaxation took 42.8s 2024-07-26 03:58:54,645 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=66.6 pTM=0.654 ipTM=0.262 2024-07-26 03:59:33,728 Relaxation took 39.1s 2024-07-26 03:59:33,728 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=67.9 pTM=0.621 ipTM=0.144 2024-07-26 04:00:10,310 Relaxation took 36.6s 2024-07-26 04:00:10,310 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=68.3 pTM=0.628 ipTM=0.135 2024-07-26 04:01:09,023 Relaxation took 58.7s 2024-07-26 04:01:09,024 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=68 pTM=0.622 ipTM=0.134 2024-07-26 04:01:59,304 Relaxation took 50.3s 2024-07-26 04:01:59,304 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=67 pTM=0.623 ipTM=0.122 2024-07-26 04:02:00,701 Done