2024-07-26 06:27:44,205 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-26 06:27:44,522 Running on GPU
2024-07-26 06:27:46,629 Found 6 citations for tools or databases
2024-07-26 06:27:46,629 Query 1/1: CSNK1A1_FBXL8 (length 711)
2024-07-26 06:27:51,419 Setting max_seq=508, max_extra_seq=2048
2024-07-26 06:30:39,540 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=80.4 pTM=0.572 ipTM=0.23
2024-07-26 06:30:49,759 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=81.4 pTM=0.558 ipTM=0.196 tol=3.97
2024-07-26 06:30:59,968 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=81.8 pTM=0.557 ipTM=0.193 tol=5.82
2024-07-26 06:31:10,211 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=82.2 pTM=0.56 ipTM=0.192 tol=1.79
2024-07-26 06:31:20,463 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=82.4 pTM=0.561 ipTM=0.188 tol=1.64
2024-07-26 06:31:30,708 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=82.4 pTM=0.561 ipTM=0.188 tol=1.99
2024-07-26 06:31:41,004 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=82.4 pTM=0.564 ipTM=0.19 tol=1.5
2024-07-26 06:31:51,298 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=82.5 pTM=0.56 ipTM=0.189 tol=2.13
2024-07-26 06:32:01,587 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=81.8 pTM=0.573 ipTM=0.214 tol=7.54
2024-07-26 06:32:11,908 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=82.5 pTM=0.562 ipTM=0.185 tol=3.48
2024-07-26 06:32:22,243 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=82.4 pTM=0.57 ipTM=0.206 tol=2.67
2024-07-26 06:32:32,582 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=82.2 pTM=0.563 ipTM=0.191 tol=1.67
2024-07-26 06:32:42,910 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=82.3 pTM=0.576 ipTM=0.218 tol=1.73
2024-07-26 06:32:53,253 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=81.9 pTM=0.561 ipTM=0.184 tol=2.56
2024-07-26 06:33:03,587 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=82.2 pTM=0.567 ipTM=0.198 tol=1.9
2024-07-26 06:33:13,960 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=82.2 pTM=0.564 ipTM=0.192 tol=1.26
2024-07-26 06:33:24,310 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=82.1 pTM=0.567 ipTM=0.201 tol=1.17
2024-07-26 06:33:34,650 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=82.5 pTM=0.566 ipTM=0.196 tol=1.62
2024-07-26 06:33:45,002 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=82.5 pTM=0.578 ipTM=0.221 tol=1.27
2024-07-26 06:33:55,370 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=82.9 pTM=0.568 ipTM=0.19 tol=3.03
2024-07-26 06:34:05,747 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=83 pTM=0.572 ipTM=0.195 tol=1.13
2024-07-26 06:34:16,132 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=83.2 pTM=0.57 ipTM=0.19 tol=0.993
2024-07-26 06:34:26,506 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=82.9 pTM=0.57 ipTM=0.189 tol=1.9
2024-07-26 06:34:36,883 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=83.5 pTM=0.574 ipTM=0.197 tol=2.94
2024-07-26 06:34:47,251 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=83.1 pTM=0.575 ipTM=0.201 tol=1.05
2024-07-26 06:34:57,622 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=83.2 pTM=0.574 ipTM=0.203 tol=1.39
2024-07-26 06:35:07,989 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=83 pTM=0.575 ipTM=0.203 tol=1.97
2024-07-26 06:35:18,358 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=83.2 pTM=0.571 ipTM=0.195 tol=0.444
2024-07-26 06:35:18,358 alphafold2_multimer_v3_model_1_seed_000 took 442.0s (27 recycles)
2024-07-26 06:35:29,073 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=80.9 pTM=0.579 ipTM=0.242
2024-07-26 06:35:39,470 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=81.2 pTM=0.566 ipTM=0.223 tol=9.8
2024-07-26 06:35:49,853 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=81.9 pTM=0.563 ipTM=0.211 tol=9.86
2024-07-26 06:36:00,234 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=82.3 pTM=0.563 ipTM=0.205 tol=3.03
2024-07-26 06:36:10,618 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=82.7 pTM=0.566 ipTM=0.209 tol=1.23
2024-07-26 06:36:20,987 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=82.6 pTM=0.566 ipTM=0.208 tol=1.28
2024-07-26 06:36:31,362 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=83.1 pTM=0.571 ipTM=0.212 tol=1.21
2024-07-26 06:36:41,720 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=82.6 pTM=0.568 ipTM=0.208 tol=1.27
2024-07-26 06:36:52,094 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=82.8 pTM=0.567 ipTM=0.208 tol=0.822
2024-07-26 06:37:02,470 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=82.7 pTM=0.568 ipTM=0.208 tol=0.726
2024-07-26 06:37:12,855 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=83.1 pTM=0.57 ipTM=0.209 tol=1.56
2024-07-26 06:37:23,215 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=82.9 pTM=0.57 ipTM=0.209 tol=1.11
2024-07-26 06:37:33,592 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=83 pTM=0.569 ipTM=0.208 tol=0.811
2024-07-26 06:37:43,966 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=83.1 pTM=0.57 ipTM=0.211 tol=1.06
2024-07-26 06:37:54,346 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=82.8 pTM=0.567 ipTM=0.205 tol=1.75
2024-07-26 06:38:04,731 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=83.2 pTM=0.571 ipTM=0.212 tol=1.12
2024-07-26 06:38:15,112 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=83.1 pTM=0.569 ipTM=0.212 tol=0.591
2024-07-26 06:38:25,488 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=83.1 pTM=0.57 ipTM=0.214 tol=0.465
2024-07-26 06:38:25,488 alphafold2_multimer_v3_model_2_seed_000 took 186.8s (17 recycles)
2024-07-26 06:38:36,195 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=80.7 pTM=0.552 ipTM=0.205
2024-07-26 06:38:46,578 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=83.6 pTM=0.643 ipTM=0.386 tol=14.5
2024-07-26 06:38:56,978 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=82.4 pTM=0.557 ipTM=0.192 tol=11.6
2024-07-26 06:39:07,379 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=83 pTM=0.562 ipTM=0.19 tol=2.52
2024-07-26 06:39:17,781 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=83.1 pTM=0.566 ipTM=0.191 tol=2.39
2024-07-26 06:39:28,161 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=82.8 pTM=0.565 ipTM=0.193 tol=5.52
2024-07-26 06:39:38,560 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=83 pTM=0.569 ipTM=0.198 tol=4.69
2024-07-26 06:39:48,951 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=82.6 pTM=0.567 ipTM=0.195 tol=4.25
2024-07-26 06:39:59,336 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=83.2 pTM=0.571 ipTM=0.202 tol=4.7
2024-07-26 06:40:09,719 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=83.1 pTM=0.571 ipTM=0.204 tol=3.12
2024-07-26 06:40:20,095 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=83.3 pTM=0.576 ipTM=0.21 tol=1.13
2024-07-26 06:40:30,452 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=83.1 pTM=0.572 ipTM=0.207 tol=1.18
2024-07-26 06:40:40,820 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=83.2 pTM=0.577 ipTM=0.214 tol=1.18
2024-07-26 06:40:51,188 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=82.8 pTM=0.57 ipTM=0.204 tol=0.852
2024-07-26 06:41:01,552 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=83.1 pTM=0.579 ipTM=0.216 tol=1.02
2024-07-26 06:41:11,933 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=83.1 pTM=0.571 ipTM=0.205 tol=0.929
2024-07-26 06:41:22,298 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=83.2 pTM=0.579 ipTM=0.217 tol=1.01
2024-07-26 06:41:32,677 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=83.2 pTM=0.573 ipTM=0.207 tol=1.11
2024-07-26 06:41:43,029 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=83.1 pTM=0.576 ipTM=0.215 tol=0.985
2024-07-26 06:41:53,391 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=83 pTM=0.573 ipTM=0.209 tol=0.383
2024-07-26 06:41:53,392 alphafold2_multimer_v3_model_3_seed_000 took 207.6s (19 recycles)
2024-07-26 06:42:04,064 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=80.2 pTM=0.596 ipTM=0.312
2024-07-26 06:42:14,443 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=81.8 pTM=0.59 ipTM=0.267 tol=8.51
2024-07-26 06:42:24,830 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=82.1 pTM=0.569 ipTM=0.215 tol=2.35
2024-07-26 06:42:35,241 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=82.4 pTM=0.559 ipTM=0.191 tol=1.14
2024-07-26 06:42:45,634 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=82.5 pTM=0.569 ipTM=0.206 tol=2.1
2024-07-26 06:42:56,023 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=82.7 pTM=0.576 ipTM=0.215 tol=0.696
2024-07-26 06:43:06,429 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=82.8 pTM=0.572 ipTM=0.212 tol=0.568
2024-07-26 06:43:16,817 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=82.9 pTM=0.58 ipTM=0.22 tol=0.565
2024-07-26 06:43:27,210 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=83.1 pTM=0.574 ipTM=0.206 tol=0.868
2024-07-26 06:43:37,599 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=83.4 pTM=0.587 ipTM=0.228 tol=0.996
2024-07-26 06:43:48,013 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=83.9 pTM=0.574 ipTM=0.201 tol=1.31
2024-07-26 06:43:58,415 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=83.5 pTM=0.585 ipTM=0.22 tol=0.891
2024-07-26 06:44:08,813 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=83.5 pTM=0.575 ipTM=0.209 tol=1.67
2024-07-26 06:44:19,212 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=83.6 pTM=0.586 ipTM=0.222 tol=1.63
2024-07-26 06:44:29,626 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=83.6 pTM=0.577 ipTM=0.207 tol=1.1
2024-07-26 06:44:40,020 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=83.8 pTM=0.586 ipTM=0.221 tol=0.826
2024-07-26 06:44:50,401 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=83.5 pTM=0.573 ipTM=0.203 tol=1.34
2024-07-26 06:45:00,805 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=83.7 pTM=0.589 ipTM=0.228 tol=1.38
2024-07-26 06:45:11,205 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=83.2 pTM=0.58 ipTM=0.213 tol=1.25
2024-07-26 06:45:21,590 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=83.7 pTM=0.586 ipTM=0.222 tol=1.11
2024-07-26 06:45:31,999 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=83.3 pTM=0.576 ipTM=0.206 tol=0.939
2024-07-26 06:45:42,412 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=83.8 pTM=0.585 ipTM=0.223 tol=1.02
2024-07-26 06:45:52,820 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=83.6 pTM=0.575 ipTM=0.206 tol=1.53
2024-07-26 06:46:03,211 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=83.7 pTM=0.583 ipTM=0.218 tol=1.05
2024-07-26 06:46:13,599 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=83.2 pTM=0.575 ipTM=0.204 tol=0.853
2024-07-26 06:46:23,997 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=83.4 pTM=0.583 ipTM=0.221 tol=1.37
2024-07-26 06:46:34,384 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=83.1 pTM=0.576 ipTM=0.21 tol=1.21
2024-07-26 06:46:44,772 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=83.6 pTM=0.588 ipTM=0.228 tol=0.608
2024-07-26 06:46:55,165 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=83.3 pTM=0.577 ipTM=0.21 tol=0.958
2024-07-26 06:47:05,558 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=83.6 pTM=0.587 ipTM=0.224 tol=0.899
2024-07-26 06:47:15,961 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=83.3 pTM=0.576 ipTM=0.208 tol=1.01
2024-07-26 06:47:15,962 alphafold2_multimer_v3_model_4_seed_000 took 322.2s (30 recycles)
2024-07-26 06:47:26,643 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=79.9 pTM=0.562 ipTM=0.223
2024-07-26 06:47:37,045 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=81.2 pTM=0.558 ipTM=0.202 tol=8.73
2024-07-26 06:47:47,441 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=82.2 pTM=0.559 ipTM=0.195 tol=1.87
2024-07-26 06:47:57,831 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=82.2 pTM=0.563 ipTM=0.197 tol=2.34
2024-07-26 06:48:08,226 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=82.1 pTM=0.563 ipTM=0.196 tol=2.04
2024-07-26 06:48:18,613 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=82.3 pTM=0.564 ipTM=0.198 tol=2.39
2024-07-26 06:48:29,005 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=82.4 pTM=0.564 ipTM=0.196 tol=2.35
2024-07-26 06:48:39,385 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=82.2 pTM=0.566 ipTM=0.202 tol=4.09
2024-07-26 06:48:49,754 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=82.2 pTM=0.564 ipTM=0.198 tol=3.77
2024-07-26 06:49:00,136 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=82.1 pTM=0.565 ipTM=0.201 tol=1.9
2024-07-26 06:49:10,522 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=82.4 pTM=0.567 ipTM=0.201 tol=1.7
2024-07-26 06:49:20,894 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=82.1 pTM=0.566 ipTM=0.204 tol=0.375
2024-07-26 06:49:20,895 alphafold2_multimer_v3_model_5_seed_000 took 124.6s (11 recycles)
2024-07-26 06:49:21,215 reranking models by 'multimer' metric
2024-07-26 06:49:23,401 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-26 06:49:51,950 Relaxation took 30.7s
2024-07-26 06:49:51,951 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=83.1 pTM=0.57 ipTM=0.214
2024-07-26 06:50:23,644 Relaxation took 31.7s
2024-07-26 06:50:23,645 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=83 pTM=0.573 ipTM=0.209
2024-07-26 06:51:12,739 Relaxation took 49.1s
2024-07-26 06:51:12,740 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=83.3 pTM=0.576 ipTM=0.208
2024-07-26 06:51:36,106 Relaxation took 23.4s
2024-07-26 06:51:36,106 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=82.1 pTM=0.566 ipTM=0.204
2024-07-26 06:52:19,440 Relaxation took 43.3s
2024-07-26 06:52:19,440 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=83.2 pTM=0.571 ipTM=0.195
2024-07-26 06:52:20,743 Done