2024-07-26 07:00:43,090 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-26 07:00:43,398 Running on GPU 2024-07-26 07:00:44,125 Found 6 citations for tools or databases 2024-07-26 07:00:44,125 Query 1/1: DGCR14_FBXL7 (length 967) 2024-07-26 07:00:44,571 Sleeping for 7s. Reason: PENDING 2024-07-26 07:00:52,017 Sleeping for 9s. Reason: RUNNING 2024-07-26 07:01:01,444 Sleeping for 9s. Reason: RUNNING 2024-07-26 07:01:10,906 Sleeping for 10s. Reason: RUNNING 2024-07-26 07:01:21,331 Sleeping for 7s. Reason: RUNNING 2024-07-26 07:01:28,776 Sleeping for 5s. Reason: RUNNING 2024-07-26 07:01:34,232 Sleeping for 5s. Reason: RUNNING 2024-07-26 07:01:39,697 Sleeping for 5s. Reason: RUNNING 2024-07-26 07:01:45,107 Sleeping for 6s. Reason: RUNNING 2024-07-26 07:01:51,524 Sleeping for 5s. Reason: RUNNING 2024-07-26 07:01:58,599 Sleeping for 10s. Reason: PENDING 2024-07-26 07:02:09,030 Sleeping for 6s. Reason: RUNNING 2024-07-26 07:02:15,477 Sleeping for 10s. Reason: RUNNING 2024-07-26 07:02:25,900 Sleeping for 5s. Reason: RUNNING 2024-07-26 07:02:31,334 Sleeping for 9s. Reason: RUNNING 2024-07-26 07:02:40,748 Sleeping for 9s. Reason: RUNNING 2024-07-26 07:02:52,980 Setting max_seq=508, max_extra_seq=2048 2024-07-26 07:05:47,255 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=55.2 pTM=0.474 ipTM=0.187 2024-07-26 07:06:07,313 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=55.3 pTM=0.467 ipTM=0.271 tol=8.89 2024-07-26 07:06:27,430 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=55.4 pTM=0.466 ipTM=0.287 tol=5.67 2024-07-26 07:06:47,596 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=55.7 pTM=0.464 ipTM=0.273 tol=4.1 2024-07-26 07:07:07,796 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=55.9 pTM=0.466 ipTM=0.273 tol=3.83 2024-07-26 07:07:28,032 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=56 pTM=0.466 ipTM=0.28 tol=3.91 2024-07-26 07:07:48,295 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=56.5 pTM=0.465 ipTM=0.258 tol=4.16 2024-07-26 07:08:08,583 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=56.4 pTM=0.466 ipTM=0.293 tol=3.29 2024-07-26 07:08:28,893 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=56.3 pTM=0.464 ipTM=0.266 tol=5.73 2024-07-26 07:08:49,226 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=56.7 pTM=0.466 ipTM=0.274 tol=6.71 2024-07-26 07:09:09,575 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=56.6 pTM=0.466 ipTM=0.289 tol=5.01 2024-07-26 07:09:29,914 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=56.6 pTM=0.466 ipTM=0.266 tol=7.23 2024-07-26 07:09:50,271 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=56.7 pTM=0.465 ipTM=0.253 tol=7.73 2024-07-26 07:10:10,660 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=56.2 pTM=0.467 ipTM=0.312 tol=8.29 2024-07-26 07:10:31,022 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=56.8 pTM=0.466 ipTM=0.276 tol=3.98 2024-07-26 07:10:51,394 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=57 pTM=0.465 ipTM=0.26 tol=6.82 2024-07-26 07:11:11,776 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=56.9 pTM=0.467 ipTM=0.299 tol=4.25 2024-07-26 07:11:32,126 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=56.8 pTM=0.466 ipTM=0.268 tol=7.32 2024-07-26 07:11:52,484 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=56.7 pTM=0.466 ipTM=0.256 tol=4.86 2024-07-26 07:12:12,828 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=56.7 pTM=0.464 ipTM=0.244 tol=4.3 2024-07-26 07:12:33,198 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=56.6 pTM=0.465 ipTM=0.262 tol=5.5 2024-07-26 07:12:53,564 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=56.7 pTM=0.465 ipTM=0.279 tol=2.26 2024-07-26 07:13:13,934 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=56.5 pTM=0.466 ipTM=0.269 tol=3.01 2024-07-26 07:13:34,303 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=56.8 pTM=0.466 ipTM=0.269 tol=3.56 2024-07-26 07:13:54,695 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=56.9 pTM=0.467 ipTM=0.308 tol=4.39 2024-07-26 07:14:15,096 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=57 pTM=0.466 ipTM=0.305 tol=3.53 2024-07-26 07:14:35,471 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=56.8 pTM=0.466 ipTM=0.283 tol=2.38 2024-07-26 07:14:55,864 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=56.8 pTM=0.464 ipTM=0.254 tol=3.31 2024-07-26 07:15:16,242 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=57 pTM=0.463 ipTM=0.26 tol=7.32 2024-07-26 07:15:36,626 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=56.9 pTM=0.464 ipTM=0.283 tol=6.32 2024-07-26 07:15:57,029 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=56.8 pTM=0.464 ipTM=0.266 tol=4.2 2024-07-26 07:15:57,030 alphafold2_multimer_v3_model_1_seed_000 took 780.1s (30 recycles) 2024-07-26 07:16:17,983 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=55.5 pTM=0.459 ipTM=0.218 2024-07-26 07:16:38,349 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=55.8 pTM=0.468 ipTM=0.18 tol=11.4 2024-07-26 07:16:58,757 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=55.9 pTM=0.461 ipTM=0.201 tol=7.21 2024-07-26 07:17:19,196 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=56.5 pTM=0.458 ipTM=0.172 tol=6.19 2024-07-26 07:17:39,618 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=56.4 pTM=0.462 ipTM=0.184 tol=4.14 2024-07-26 07:18:00,039 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=56.5 pTM=0.459 ipTM=0.188 tol=4.68 2024-07-26 07:18:20,495 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=56.5 pTM=0.458 ipTM=0.191 tol=5.19 2024-07-26 07:18:40,931 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=56.6 pTM=0.462 ipTM=0.203 tol=5.17 2024-07-26 07:19:01,397 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=56.8 pTM=0.463 ipTM=0.201 tol=5.82 2024-07-26 07:19:21,829 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=56.9 pTM=0.461 ipTM=0.206 tol=10.1 2024-07-26 07:19:42,262 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=56.8 pTM=0.463 ipTM=0.222 tol=5.17 2024-07-26 07:20:02,698 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=57 pTM=0.463 ipTM=0.219 tol=2.01 2024-07-26 07:20:23,169 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=57.1 pTM=0.461 ipTM=0.221 tol=2.82 2024-07-26 07:20:43,605 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=56.8 pTM=0.464 ipTM=0.199 tol=2.53 2024-07-26 07:21:04,017 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=57.1 pTM=0.462 ipTM=0.176 tol=2.09 2024-07-26 07:21:24,427 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=57.1 pTM=0.463 ipTM=0.183 tol=1.5 2024-07-26 07:21:44,844 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=56.8 pTM=0.459 ipTM=0.172 tol=2.55 2024-07-26 07:22:05,262 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=56.8 pTM=0.46 ipTM=0.192 tol=2.06 2024-07-26 07:22:25,665 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=56.8 pTM=0.46 ipTM=0.193 tol=1.44 2024-07-26 07:22:46,067 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=56.9 pTM=0.46 ipTM=0.162 tol=1.92 2024-07-26 07:23:06,482 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=56.6 pTM=0.461 ipTM=0.168 tol=2.42 2024-07-26 07:23:26,885 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=57.1 pTM=0.459 ipTM=0.181 tol=1.78 2024-07-26 07:23:47,296 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=56.8 pTM=0.46 ipTM=0.205 tol=1.98 2024-07-26 07:24:07,685 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=56.9 pTM=0.459 ipTM=0.191 tol=2.29 2024-07-26 07:24:28,095 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=56.9 pTM=0.459 ipTM=0.187 tol=1.99 2024-07-26 07:24:48,477 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=57 pTM=0.461 ipTM=0.201 tol=1.95 2024-07-26 07:25:08,883 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=56.9 pTM=0.461 ipTM=0.198 tol=2.35 2024-07-26 07:25:29,276 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=57 pTM=0.46 ipTM=0.201 tol=1.39 2024-07-26 07:25:49,664 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=56.9 pTM=0.46 ipTM=0.191 tol=1.56 2024-07-26 07:26:10,049 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=56.8 pTM=0.462 ipTM=0.193 tol=1.3 2024-07-26 07:26:30,448 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=56.9 pTM=0.46 ipTM=0.208 tol=1.63 2024-07-26 07:26:30,448 alphafold2_multimer_v3_model_2_seed_000 took 632.8s (30 recycles) 2024-07-26 07:26:51,501 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=52.6 pTM=0.469 ipTM=0.216 2024-07-26 07:27:11,989 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=55.6 pTM=0.51 ipTM=0.462 tol=18.8 2024-07-26 07:27:32,485 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=56 pTM=0.503 ipTM=0.425 tol=9.74 2024-07-26 07:27:52,958 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=55.9 pTM=0.493 ipTM=0.351 tol=5.4 2024-07-26 07:28:13,452 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=56.2 pTM=0.489 ipTM=0.316 tol=4.46 2024-07-26 07:28:33,934 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=56.3 pTM=0.484 ipTM=0.282 tol=4.06 2024-07-26 07:28:54,415 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=56.5 pTM=0.498 ipTM=0.337 tol=3.19 2024-07-26 07:29:14,879 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=56.8 pTM=0.498 ipTM=0.347 tol=3.38 2024-07-26 07:29:35,333 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=57.1 pTM=0.517 ipTM=0.402 tol=1.95 2024-07-26 07:29:55,776 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=57.2 pTM=0.51 ipTM=0.377 tol=1.94 2024-07-26 07:30:16,238 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=57.2 pTM=0.512 ipTM=0.377 tol=1.72 2024-07-26 07:30:36,699 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=57.6 pTM=0.517 ipTM=0.401 tol=1.67 2024-07-26 07:30:57,149 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=57.5 pTM=0.52 ipTM=0.385 tol=1.38 2024-07-26 07:31:17,616 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=57.4 pTM=0.517 ipTM=0.406 tol=1.42 2024-07-26 07:31:38,066 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=57.6 pTM=0.517 ipTM=0.386 tol=1.92 2024-07-26 07:31:58,510 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=57.8 pTM=0.522 ipTM=0.429 tol=1.95 2024-07-26 07:32:18,962 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=57.8 pTM=0.527 ipTM=0.415 tol=2.65 2024-07-26 07:32:39,433 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=57.6 pTM=0.52 ipTM=0.411 tol=2.88 2024-07-26 07:32:59,887 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=57.8 pTM=0.529 ipTM=0.417 tol=2.53 2024-07-26 07:33:20,374 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=57.7 pTM=0.513 ipTM=0.37 tol=2.19 2024-07-26 07:33:40,833 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=57.8 pTM=0.525 ipTM=0.405 tol=2.45 2024-07-26 07:34:01,274 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=58.2 pTM=0.537 ipTM=0.48 tol=2.27 2024-07-26 07:34:21,741 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=57.7 pTM=0.523 ipTM=0.405 tol=2.37 2024-07-26 07:34:42,214 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=57.5 pTM=0.519 ipTM=0.395 tol=2 2024-07-26 07:35:02,681 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=57.9 pTM=0.526 ipTM=0.395 tol=1.72 2024-07-26 07:35:23,146 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=58.2 pTM=0.544 ipTM=0.515 tol=2.06 2024-07-26 07:35:43,609 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=58 pTM=0.531 ipTM=0.453 tol=1.72 2024-07-26 07:36:04,066 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=57.6 pTM=0.521 ipTM=0.406 tol=2.24 2024-07-26 07:36:24,516 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=57.7 pTM=0.523 ipTM=0.392 tol=1.24 2024-07-26 07:36:44,961 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=57.7 pTM=0.519 ipTM=0.397 tol=1.7 2024-07-26 07:37:05,416 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=57.8 pTM=0.526 ipTM=0.4 tol=1.75 2024-07-26 07:37:05,417 alphafold2_multimer_v3_model_3_seed_000 took 634.4s (30 recycles) 2024-07-26 07:37:26,437 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=50.8 pTM=0.464 ipTM=0.273 2024-07-26 07:37:46,930 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=52.4 pTM=0.456 ipTM=0.193 tol=21.4 2024-07-26 07:38:07,399 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=53.5 pTM=0.492 ipTM=0.351 tol=12.5 2024-07-26 07:38:27,923 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=53.1 pTM=0.455 ipTM=0.217 tol=8.5 2024-07-26 07:38:48,434 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=53.8 pTM=0.466 ipTM=0.259 tol=8.77 2024-07-26 07:39:08,956 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=53.8 pTM=0.464 ipTM=0.238 tol=10.1 2024-07-26 07:39:29,493 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=54.1 pTM=0.465 ipTM=0.287 tol=6.07 2024-07-26 07:39:50,010 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=54.2 pTM=0.465 ipTM=0.229 tol=4.36 2024-07-26 07:40:10,552 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=54.5 pTM=0.465 ipTM=0.283 tol=4.8 2024-07-26 07:40:31,075 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=54.4 pTM=0.46 ipTM=0.231 tol=4.17 2024-07-26 07:40:51,564 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=54.6 pTM=0.474 ipTM=0.289 tol=5.94 2024-07-26 07:41:12,070 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=54.1 pTM=0.461 ipTM=0.21 tol=4.14 2024-07-26 07:41:32,569 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=54.2 pTM=0.466 ipTM=0.208 tol=4.61 2024-07-26 07:41:53,091 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=54.1 pTM=0.452 ipTM=0.182 tol=5.28 2024-07-26 07:42:13,592 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=54.4 pTM=0.448 ipTM=0.161 tol=8.98 2024-07-26 07:42:34,069 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=54.1 pTM=0.46 ipTM=0.2 tol=7.3 2024-07-26 07:42:54,580 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=54.1 pTM=0.455 ipTM=0.209 tol=4.77 2024-07-26 07:43:15,107 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=54.4 pTM=0.453 ipTM=0.199 tol=4.5 2024-07-26 07:43:35,625 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=53.7 pTM=0.467 ipTM=0.219 tol=9.9 2024-07-26 07:43:56,181 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=53.7 pTM=0.452 ipTM=0.223 tol=8.74 2024-07-26 07:44:16,734 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=54.2 pTM=0.451 ipTM=0.177 tol=6.51 2024-07-26 07:44:37,270 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=53.1 pTM=0.464 ipTM=0.209 tol=11 2024-07-26 07:44:57,870 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=53.4 pTM=0.452 ipTM=0.176 tol=8.73 2024-07-26 07:45:18,440 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=53.9 pTM=0.451 ipTM=0.178 tol=8.2 2024-07-26 07:45:38,991 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=53.4 pTM=0.457 ipTM=0.171 tol=9.71 2024-07-26 07:45:59,481 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=53.5 pTM=0.471 ipTM=0.205 tol=6.06 2024-07-26 07:46:20,038 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=53.7 pTM=0.453 ipTM=0.211 tol=10.6 2024-07-26 07:46:40,571 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=54.2 pTM=0.454 ipTM=0.18 tol=4.45 2024-07-26 07:47:01,063 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=53.7 pTM=0.466 ipTM=0.21 tol=12.2 2024-07-26 07:47:21,588 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=53.8 pTM=0.457 ipTM=0.172 tol=6.35 2024-07-26 07:47:42,103 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=53.8 pTM=0.458 ipTM=0.175 tol=4.95 2024-07-26 07:47:42,104 alphafold2_multimer_v3_model_4_seed_000 took 636.1s (30 recycles) 2024-07-26 07:48:03,061 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=52.1 pTM=0.486 ipTM=0.294 2024-07-26 07:48:23,463 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=55.2 pTM=0.513 ipTM=0.485 tol=17.9 2024-07-26 07:48:43,875 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=57.4 pTM=0.546 ipTM=0.63 tol=6.65 2024-07-26 07:49:04,286 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=57.2 pTM=0.528 ipTM=0.517 tol=7.66 2024-07-26 07:49:24,725 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=57.4 pTM=0.533 ipTM=0.515 tol=3.98 2024-07-26 07:49:45,156 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=57.2 pTM=0.527 ipTM=0.486 tol=3.28 2024-07-26 07:50:05,611 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=57.6 pTM=0.534 ipTM=0.519 tol=2.4 2024-07-26 07:50:26,030 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=57.4 pTM=0.533 ipTM=0.506 tol=3.22 2024-07-26 07:50:46,450 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=57.6 pTM=0.534 ipTM=0.503 tol=2.15 2024-07-26 07:51:06,860 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=57.3 pTM=0.528 ipTM=0.474 tol=2.96 2024-07-26 07:51:27,276 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=57.8 pTM=0.54 ipTM=0.534 tol=2.3 2024-07-26 07:51:47,680 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=57.6 pTM=0.534 ipTM=0.507 tol=3.06 2024-07-26 07:52:08,090 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=58.3 pTM=0.551 ipTM=0.603 tol=1.77 2024-07-26 07:52:28,505 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=58 pTM=0.541 ipTM=0.541 tol=3.49 2024-07-26 07:52:48,936 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=58.3 pTM=0.551 ipTM=0.6 tol=3.3 2024-07-26 07:53:09,355 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=57.8 pTM=0.538 ipTM=0.537 tol=2.64 2024-07-26 07:53:29,802 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=57.7 pTM=0.535 ipTM=0.521 tol=4.55 2024-07-26 07:53:50,252 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=57.6 pTM=0.531 ipTM=0.499 tol=2.69 2024-07-26 07:54:10,695 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=57.9 pTM=0.542 ipTM=0.566 tol=4.94 2024-07-26 07:54:31,135 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=57.8 pTM=0.533 ipTM=0.523 tol=5.2 2024-07-26 07:54:51,570 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=57.3 pTM=0.528 ipTM=0.49 tol=3.27 2024-07-26 07:55:11,986 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=57.2 pTM=0.523 ipTM=0.473 tol=3.5 2024-07-26 07:55:32,396 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=57.5 pTM=0.535 ipTM=0.546 tol=3.79 2024-07-26 07:55:52,804 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=57.5 pTM=0.531 ipTM=0.518 tol=8.28 2024-07-26 07:56:13,227 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=58.1 pTM=0.545 ipTM=0.588 tol=7.72 2024-07-26 07:56:33,614 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=57.8 pTM=0.538 ipTM=0.542 tol=6.29 2024-07-26 07:56:54,035 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=58 pTM=0.544 ipTM=0.587 tol=6.57 2024-07-26 07:57:14,452 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=57.6 pTM=0.535 ipTM=0.535 tol=8.08 2024-07-26 07:57:34,867 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=57.4 pTM=0.534 ipTM=0.525 tol=5.06 2024-07-26 07:57:55,266 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=57.2 pTM=0.532 ipTM=0.517 tol=6.11 2024-07-26 07:58:15,685 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=57.2 pTM=0.531 ipTM=0.514 tol=5.18 2024-07-26 07:58:15,686 alphafold2_multimer_v3_model_5_seed_000 took 633.0s (30 recycles) 2024-07-26 07:58:16,266 reranking models by 'multimer' metric 2024-07-26 07:58:17,560 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-26 07:59:01,234 Relaxation took 45.0s 2024-07-26 07:59:01,234 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=57.2 pTM=0.531 ipTM=0.514 2024-07-26 07:59:59,465 Relaxation took 58.2s 2024-07-26 07:59:59,465 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=57.8 pTM=0.526 ipTM=0.4 2024-07-26 08:00:59,954 Relaxation took 60.5s 2024-07-26 08:00:59,954 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=56.8 pTM=0.464 ipTM=0.266 2024-07-26 08:08:34,976 Relaxation took 455.0s 2024-07-26 08:08:34,976 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=56.9 pTM=0.46 ipTM=0.208 2024-07-26 08:09:53,235 Relaxation took 78.3s 2024-07-26 08:09:53,235 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=53.8 pTM=0.458 ipTM=0.175 2024-07-26 08:09:55,302 Done