2024-07-26 14:01:08,827 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-26 14:01:09,170 Running on GPU 2024-07-26 14:01:13,102 Found 6 citations for tools or databases 2024-07-26 14:01:13,102 Query 1/1: FEM1A_FBXO30 (length 1415) 2024-07-26 14:01:13,577 Sleeping for 5s. Reason: PENDING 2024-07-26 14:01:19,003 Sleeping for 8s. Reason: RUNNING 2024-07-26 14:01:27,435 Sleeping for 5s. Reason: RUNNING 2024-07-26 14:01:32,877 Sleeping for 8s. Reason: RUNNING 2024-07-26 14:01:41,314 Sleeping for 5s. Reason: RUNNING 2024-07-26 14:01:46,735 Sleeping for 9s. Reason: RUNNING 2024-07-26 14:01:56,156 Sleeping for 5s. Reason: RUNNING 2024-07-26 14:02:01,603 Sleeping for 8s. Reason: RUNNING 2024-07-26 14:02:10,029 Sleeping for 8s. Reason: RUNNING 2024-07-26 14:02:18,502 Sleeping for 9s. Reason: RUNNING 2024-07-26 14:02:27,915 Sleeping for 5s. Reason: RUNNING 2024-07-26 14:02:33,328 Sleeping for 5s. Reason: RUNNING 2024-07-26 14:02:38,754 Sleeping for 10s. Reason: RUNNING 2024-07-26 14:02:49,177 Sleeping for 6s. Reason: RUNNING 2024-07-26 14:02:55,589 Sleeping for 5s. Reason: RUNNING 2024-07-26 14:03:01,006 Sleeping for 8s. Reason: RUNNING 2024-07-26 14:03:09,456 Sleeping for 7s. Reason: RUNNING 2024-07-26 14:03:18,509 Sleeping for 5s. Reason: PENDING 2024-07-26 14:03:23,936 Sleeping for 10s. Reason: RUNNING 2024-07-26 14:03:34,364 Sleeping for 10s. Reason: RUNNING 2024-07-26 14:03:44,820 Sleeping for 6s. Reason: RUNNING 2024-07-26 14:03:51,233 Sleeping for 10s. Reason: RUNNING 2024-07-26 14:04:01,645 Sleeping for 10s. Reason: RUNNING 2024-07-26 14:04:12,103 Sleeping for 10s. Reason: RUNNING 2024-07-26 14:04:22,517 Sleeping for 8s. Reason: RUNNING 2024-07-26 14:04:30,934 Sleeping for 9s. Reason: RUNNING 2024-07-26 14:04:43,581 Setting max_seq=508, max_extra_seq=2048 2024-07-26 14:08:45,390 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=63.8 pTM=0.482 ipTM=0.228 2024-07-26 14:09:40,596 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=63.9 pTM=0.483 ipTM=0.193 tol=9.7 2024-07-26 14:10:35,831 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=63.8 pTM=0.487 ipTM=0.217 tol=5.07 2024-07-26 14:11:31,085 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=64.1 pTM=0.499 ipTM=0.448 tol=5.15 2024-07-26 14:12:26,353 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=64.1 pTM=0.496 ipTM=0.322 tol=4.74 2024-07-26 14:13:21,631 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=64.1 pTM=0.498 ipTM=0.272 tol=4.36 2024-07-26 14:14:16,936 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=64.1 pTM=0.497 ipTM=0.316 tol=4.52 2024-07-26 14:15:12,238 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=64.2 pTM=0.499 ipTM=0.339 tol=8.03 2024-07-26 14:16:07,566 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=64.2 pTM=0.496 ipTM=0.368 tol=4.76 2024-07-26 14:17:02,948 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=64.2 pTM=0.497 ipTM=0.35 tol=3.37 2024-07-26 14:17:58,308 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=64.5 pTM=0.5 ipTM=0.38 tol=2.94 2024-07-26 14:18:53,684 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=64.3 pTM=0.499 ipTM=0.343 tol=2.52 2024-07-26 14:19:49,052 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=64.3 pTM=0.499 ipTM=0.38 tol=1.68 2024-07-26 14:20:44,402 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=64.2 pTM=0.498 ipTM=0.348 tol=2.17 2024-07-26 14:21:39,721 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=64.1 pTM=0.498 ipTM=0.396 tol=2.54 2024-07-26 14:22:35,031 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=64.3 pTM=0.497 ipTM=0.329 tol=1.65 2024-07-26 14:23:30,337 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=64.5 pTM=0.501 ipTM=0.411 tol=1.55 2024-07-26 14:24:25,635 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=64.1 pTM=0.499 ipTM=0.34 tol=2.3 2024-07-26 14:25:20,931 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=64.4 pTM=0.5 ipTM=0.375 tol=1.67 2024-07-26 14:26:16,219 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=64.4 pTM=0.5 ipTM=0.353 tol=1.83 2024-07-26 14:27:11,490 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=64.2 pTM=0.5 ipTM=0.366 tol=2.3 2024-07-26 14:28:06,791 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=64.1 pTM=0.498 ipTM=0.332 tol=3.94 2024-07-26 14:29:02,097 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=64.2 pTM=0.498 ipTM=0.38 tol=3.31 2024-07-26 14:29:57,388 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=64.2 pTM=0.5 ipTM=0.337 tol=3.2 2024-07-26 14:30:52,698 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=64.5 pTM=0.503 ipTM=0.408 tol=2.81 2024-07-26 14:31:48,024 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=64.3 pTM=0.5 ipTM=0.341 tol=1.67 2024-07-26 14:32:43,381 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=64.4 pTM=0.5 ipTM=0.385 tol=2.69 2024-07-26 14:33:38,736 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=64.3 pTM=0.499 ipTM=0.343 tol=2.27 2024-07-26 14:34:34,083 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=64.4 pTM=0.499 ipTM=0.352 tol=1.27 2024-07-26 14:35:29,491 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=64.2 pTM=0.497 ipTM=0.321 tol=1.52 2024-07-26 14:36:24,911 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=64.2 pTM=0.496 ipTM=0.35 tol=1.42 2024-07-26 14:36:24,913 alphafold2_multimer_v3_model_1_seed_000 took 1896.2s (30 recycles) 2024-07-26 14:37:21,590 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=62.2 pTM=0.458 ipTM=0.179 2024-07-26 14:38:17,153 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=64.1 pTM=0.469 ipTM=0.164 tol=12.2 2024-07-26 14:39:12,734 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=64.6 pTM=0.474 ipTM=0.165 tol=6.09 2024-07-26 14:40:08,324 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=64.6 pTM=0.478 ipTM=0.175 tol=5.63 2024-07-26 14:41:03,901 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=64.7 pTM=0.477 ipTM=0.172 tol=6.42 2024-07-26 14:41:59,446 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=64.8 pTM=0.481 ipTM=0.18 tol=4.72 2024-07-26 14:42:55,008 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=65.1 pTM=0.48 ipTM=0.177 tol=3.52 2024-07-26 14:43:50,592 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=65.1 pTM=0.481 ipTM=0.179 tol=2.33 2024-07-26 14:44:46,184 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=65 pTM=0.48 ipTM=0.176 tol=1.83 2024-07-26 14:45:41,762 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=65.1 pTM=0.481 ipTM=0.181 tol=2.15 2024-07-26 14:46:37,360 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=65.1 pTM=0.485 ipTM=0.18 tol=2.22 2024-07-26 14:47:32,965 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=65.2 pTM=0.486 ipTM=0.189 tol=2.94 2024-07-26 14:48:28,605 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=64.9 pTM=0.484 ipTM=0.18 tol=2.89 2024-07-26 14:49:24,209 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=65.1 pTM=0.489 ipTM=0.192 tol=2.53 2024-07-26 14:50:19,821 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=64.8 pTM=0.485 ipTM=0.18 tol=3.44 2024-07-26 14:51:15,438 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=65 pTM=0.486 ipTM=0.186 tol=3.71 2024-07-26 14:52:11,076 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=64.9 pTM=0.485 ipTM=0.18 tol=4.5 2024-07-26 14:53:06,676 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=64.9 pTM=0.486 ipTM=0.188 tol=4.5 2024-07-26 14:54:02,269 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=64.9 pTM=0.482 ipTM=0.18 tol=5.68 2024-07-26 14:54:57,822 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=65.1 pTM=0.484 ipTM=0.184 tol=5.15 2024-07-26 14:55:53,384 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=64.8 pTM=0.481 ipTM=0.176 tol=5.16 2024-07-26 14:56:48,998 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=64.8 pTM=0.484 ipTM=0.189 tol=2.74 2024-07-26 14:57:44,645 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=64.7 pTM=0.483 ipTM=0.181 tol=2.81 2024-07-26 14:58:40,140 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=64.9 pTM=0.487 ipTM=0.19 tol=2.81 2024-07-26 14:59:35,681 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=64.9 pTM=0.485 ipTM=0.182 tol=3.16 2024-07-26 15:00:31,257 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=64.9 pTM=0.483 ipTM=0.187 tol=2.75 2024-07-26 15:01:26,842 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=64.9 pTM=0.482 ipTM=0.181 tol=4.17 2024-07-26 15:02:22,424 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=65.1 pTM=0.482 ipTM=0.182 tol=2.82 2024-07-26 15:03:18,006 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=65.1 pTM=0.484 ipTM=0.178 tol=2.57 2024-07-26 15:04:13,563 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=65.1 pTM=0.484 ipTM=0.186 tol=3.68 2024-07-26 15:05:09,127 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=64.9 pTM=0.483 ipTM=0.179 tol=4.59 2024-07-26 15:05:09,129 alphafold2_multimer_v3_model_2_seed_000 took 1723.0s (30 recycles) 2024-07-26 15:06:06,012 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=61.7 pTM=0.462 ipTM=0.2 2024-07-26 15:07:01,625 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=62.8 pTM=0.476 ipTM=0.18 tol=25.4 2024-07-26 15:07:57,168 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=63.7 pTM=0.491 ipTM=0.252 tol=11.2 2024-07-26 15:08:52,653 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=63.8 pTM=0.5 ipTM=0.487 tol=5.79 2024-07-26 15:09:48,148 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=64.2 pTM=0.5 ipTM=0.314 tol=3.26 2024-07-26 15:10:43,630 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=64.1 pTM=0.502 ipTM=0.261 tol=2.19 2024-07-26 15:11:39,136 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=64.6 pTM=0.503 ipTM=0.257 tol=2.11 2024-07-26 15:12:34,642 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=64.6 pTM=0.51 ipTM=0.379 tol=1.87 2024-07-26 15:13:30,152 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=65.1 pTM=0.514 ipTM=0.455 tol=2.19 2024-07-26 15:14:25,657 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=64.8 pTM=0.509 ipTM=0.39 tol=1.56 2024-07-26 15:15:21,178 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=64.9 pTM=0.509 ipTM=0.409 tol=1.48 2024-07-26 15:16:16,719 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=64.7 pTM=0.507 ipTM=0.372 tol=1.54 2024-07-26 15:17:12,270 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=64.8 pTM=0.507 ipTM=0.357 tol=3.38 2024-07-26 15:18:07,847 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=64.6 pTM=0.504 ipTM=0.274 tol=5.12 2024-07-26 15:19:03,396 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=64.8 pTM=0.503 ipTM=0.293 tol=4.44 2024-07-26 15:19:58,905 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=64.9 pTM=0.505 ipTM=0.36 tol=3.65 2024-07-26 15:20:54,376 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=64.8 pTM=0.505 ipTM=0.404 tol=2.57 2024-07-26 15:21:49,857 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=64.5 pTM=0.504 ipTM=0.348 tol=2.6 2024-07-26 15:22:45,435 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=64.6 pTM=0.505 ipTM=0.299 tol=4.71 2024-07-26 15:23:40,924 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=64.6 pTM=0.505 ipTM=0.316 tol=5.21 2024-07-26 15:24:36,411 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=64.4 pTM=0.505 ipTM=0.297 tol=1.93 2024-07-26 15:25:31,903 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=64.8 pTM=0.509 ipTM=0.28 tol=3.27 2024-07-26 15:26:27,430 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=64.5 pTM=0.502 ipTM=0.259 tol=5.61 2024-07-26 15:27:22,998 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=64.8 pTM=0.505 ipTM=0.272 tol=3.11 2024-07-26 15:28:18,574 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=64.6 pTM=0.506 ipTM=0.306 tol=2.87 2024-07-26 15:29:14,143 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=64.6 pTM=0.502 ipTM=0.248 tol=2.16 2024-07-26 15:30:09,654 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=64.9 pTM=0.513 ipTM=0.383 tol=2.36 2024-07-26 15:31:05,196 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=64.8 pTM=0.508 ipTM=0.274 tol=2.19 2024-07-26 15:32:00,737 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=64.8 pTM=0.507 ipTM=0.265 tol=2.45 2024-07-26 15:32:56,267 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=64.8 pTM=0.507 ipTM=0.289 tol=1.82 2024-07-26 15:33:51,803 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=64.8 pTM=0.505 ipTM=0.281 tol=2.64 2024-07-26 15:33:51,804 alphafold2_multimer_v3_model_3_seed_000 took 1721.5s (30 recycles) 2024-07-26 15:34:48,831 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=61.2 pTM=0.452 ipTM=0.189 2024-07-26 15:35:44,694 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=62.7 pTM=0.46 ipTM=0.438 tol=11.3 2024-07-26 15:36:40,387 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=63 pTM=0.481 ipTM=0.322 tol=19.7 2024-07-26 15:37:36,036 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=63.7 pTM=0.511 ipTM=0.309 tol=16 2024-07-26 15:38:31,612 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=63.8 pTM=0.515 ipTM=0.309 tol=7.76 2024-07-26 15:39:27,255 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=63.8 pTM=0.52 ipTM=0.293 tol=5.41 2024-07-26 15:40:22,926 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=63.9 pTM=0.513 ipTM=0.261 tol=4.75 2024-07-26 15:41:18,563 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=64.1 pTM=0.518 ipTM=0.36 tol=4.08 2024-07-26 15:42:14,152 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=63.9 pTM=0.523 ipTM=0.383 tol=5.05 2024-07-26 15:43:09,735 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=64 pTM=0.518 ipTM=0.315 tol=2.6 2024-07-26 15:44:05,379 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=63.5 pTM=0.516 ipTM=0.286 tol=4.11 2024-07-26 15:45:01,007 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=63.7 pTM=0.515 ipTM=0.312 tol=2.6 2024-07-26 15:45:56,624 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=63.4 pTM=0.516 ipTM=0.262 tol=2.63 2024-07-26 15:46:52,269 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=63.5 pTM=0.516 ipTM=0.31 tol=3.43 2024-07-26 15:47:47,878 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=63.4 pTM=0.518 ipTM=0.413 tol=2.85 2024-07-26 15:48:43,536 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=63.3 pTM=0.511 ipTM=0.324 tol=4.63 2024-07-26 15:49:39,174 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=63.2 pTM=0.51 ipTM=0.26 tol=2.94 2024-07-26 15:50:34,832 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=63.2 pTM=0.511 ipTM=0.293 tol=3.21 2024-07-26 15:51:30,490 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=63.2 pTM=0.51 ipTM=0.282 tol=6.09 2024-07-26 15:52:26,181 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=63.2 pTM=0.507 ipTM=0.277 tol=5.86 2024-07-26 15:53:21,852 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=62.7 pTM=0.503 ipTM=0.241 tol=6.36 2024-07-26 15:54:17,556 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=63.1 pTM=0.506 ipTM=0.31 tol=4.55 2024-07-26 15:55:13,209 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=62.8 pTM=0.502 ipTM=0.289 tol=3.97 2024-07-26 15:56:08,877 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=62.9 pTM=0.499 ipTM=0.253 tol=4.59 2024-07-26 15:57:04,507 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=63.3 pTM=0.505 ipTM=0.337 tol=7.27 2024-07-26 15:58:00,169 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=63.2 pTM=0.502 ipTM=0.286 tol=6.27 2024-07-26 15:58:55,842 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=63.2 pTM=0.5 ipTM=0.271 tol=6.37 2024-07-26 15:59:51,495 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=63.1 pTM=0.502 ipTM=0.286 tol=4.59 2024-07-26 16:00:47,180 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=63.1 pTM=0.5 ipTM=0.291 tol=3.22 2024-07-26 16:01:42,896 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=63.3 pTM=0.503 ipTM=0.285 tol=3.81 2024-07-26 16:02:38,604 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=63.4 pTM=0.505 ipTM=0.328 tol=2.81 2024-07-26 16:02:38,605 alphafold2_multimer_v3_model_4_seed_000 took 1725.6s (30 recycles) 2024-07-26 16:03:35,487 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=60.3 pTM=0.45 ipTM=0.185 2024-07-26 16:04:31,074 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=63.7 pTM=0.472 ipTM=0.564 tol=8.66 2024-07-26 16:05:26,653 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=64.4 pTM=0.472 ipTM=0.426 tol=6.81 2024-07-26 16:06:22,275 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=64.8 pTM=0.474 ipTM=0.265 tol=7.32 2024-07-26 16:07:17,892 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=64.9 pTM=0.471 ipTM=0.259 tol=5.84 2024-07-26 16:08:13,548 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=65.2 pTM=0.476 ipTM=0.28 tol=5.27 2024-07-26 16:09:09,084 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=65.4 pTM=0.476 ipTM=0.269 tol=5.83 2024-07-26 16:10:04,591 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=65.6 pTM=0.478 ipTM=0.285 tol=3.01 2024-07-26 16:11:00,115 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=65.6 pTM=0.475 ipTM=0.272 tol=1.81 2024-07-26 16:11:55,694 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=65.5 pTM=0.471 ipTM=0.248 tol=2.39 2024-07-26 16:12:51,286 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=65.6 pTM=0.469 ipTM=0.229 tol=3.78 2024-07-26 16:13:46,869 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=65.4 pTM=0.468 ipTM=0.224 tol=4.58 2024-07-26 16:14:42,443 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=65.5 pTM=0.468 ipTM=0.224 tol=2.46 2024-07-26 16:15:38,033 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=65.4 pTM=0.469 ipTM=0.218 tol=3.56 2024-07-26 16:16:33,621 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=65.3 pTM=0.466 ipTM=0.212 tol=3.39 2024-07-26 16:17:29,184 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=65.6 pTM=0.47 ipTM=0.229 tol=3.66 2024-07-26 16:18:24,733 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=65.3 pTM=0.467 ipTM=0.218 tol=3.63 2024-07-26 16:19:20,271 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=65.1 pTM=0.466 ipTM=0.212 tol=4.3 2024-07-26 16:20:15,835 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=65.3 pTM=0.467 ipTM=0.219 tol=4.09 2024-07-26 16:21:11,426 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=65.2 pTM=0.468 ipTM=0.224 tol=3.93 2024-07-26 16:22:07,053 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=65.1 pTM=0.467 ipTM=0.216 tol=4.54 2024-07-26 16:23:02,672 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=65 pTM=0.465 ipTM=0.209 tol=4.22 2024-07-26 16:23:58,352 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=65.2 pTM=0.469 ipTM=0.214 tol=2.63 2024-07-26 16:24:53,945 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=65.2 pTM=0.468 ipTM=0.212 tol=3.25 2024-07-26 16:25:49,640 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=65.4 pTM=0.472 ipTM=0.344 tol=5.07 2024-07-26 16:26:45,254 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=65.4 pTM=0.472 ipTM=0.292 tol=3.72 2024-07-26 16:27:40,826 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=65.4 pTM=0.469 ipTM=0.212 tol=3.49 2024-07-26 16:28:36,389 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=65.3 pTM=0.471 ipTM=0.281 tol=3.29 2024-07-26 16:29:31,965 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=65.4 pTM=0.471 ipTM=0.326 tol=3.34 2024-07-26 16:30:27,574 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=65.4 pTM=0.471 ipTM=0.219 tol=3.01 2024-07-26 16:31:23,191 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=65.2 pTM=0.466 ipTM=0.202 tol=2.97 2024-07-26 16:31:23,193 alphafold2_multimer_v3_model_5_seed_000 took 1723.4s (30 recycles) 2024-07-26 16:31:24,384 reranking models by 'multimer' metric 2024-07-26 16:31:28,240 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-26 16:34:05,708 Relaxation took 161.3s 2024-07-26 16:34:05,708 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=64.2 pTM=0.496 ipTM=0.35 2024-07-26 16:36:52,157 Relaxation took 166.4s 2024-07-26 16:36:52,157 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=63.4 pTM=0.505 ipTM=0.328 2024-07-26 16:39:38,499 Relaxation took 166.3s 2024-07-26 16:39:38,499 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=64.8 pTM=0.505 ipTM=0.281 2024-07-26 16:42:11,439 Relaxation took 152.9s 2024-07-26 16:42:11,439 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=65.2 pTM=0.466 ipTM=0.202 2024-07-26 16:46:51,493 Relaxation took 280.1s 2024-07-26 16:46:51,493 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=64.9 pTM=0.483 ipTM=0.179 2024-07-26 16:46:56,848 Done