2024-07-26 15:49:20,680 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-26 15:49:20,991 Running on GPU 2024-07-26 15:49:24,604 Found 6 citations for tools or databases 2024-07-26 15:49:24,605 Query 1/1: GATA2_FBXO44 (length 721) 2024-07-26 15:49:25,059 Sleeping for 5s. Reason: PENDING 2024-07-26 15:49:30,485 Sleeping for 8s. Reason: RUNNING 2024-07-26 15:49:38,913 Sleeping for 6s. Reason: RUNNING 2024-07-26 15:49:45,332 Sleeping for 6s. Reason: RUNNING 2024-07-26 15:49:51,773 Sleeping for 7s. Reason: RUNNING 2024-07-26 15:49:59,196 Sleeping for 9s. Reason: RUNNING 2024-07-26 15:50:08,634 Sleeping for 9s. Reason: RUNNING 2024-07-26 15:50:18,036 Sleeping for 9s. Reason: RUNNING 2024-07-26 15:50:29,199 Sleeping for 10s. Reason: PENDING 2024-07-26 15:50:39,661 Sleeping for 5s. Reason: RUNNING 2024-07-26 15:50:45,076 Sleeping for 6s. Reason: RUNNING 2024-07-26 15:50:51,507 Sleeping for 5s. Reason: RUNNING 2024-07-26 15:50:56,943 Sleeping for 9s. Reason: RUNNING 2024-07-26 15:51:09,212 Setting max_seq=508, max_extra_seq=2048 2024-07-26 15:54:35,649 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=45.8 pTM=0.418 ipTM=0.194 2024-07-26 15:54:46,179 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=46.5 pTM=0.423 ipTM=0.188 tol=14.8 2024-07-26 15:54:56,715 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=47.3 pTM=0.433 ipTM=0.377 tol=20.1 2024-07-26 15:55:07,259 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=47.3 pTM=0.424 ipTM=0.337 tol=12.2 2024-07-26 15:55:17,820 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=47.3 pTM=0.426 ipTM=0.349 tol=8.44 2024-07-26 15:55:28,392 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=47.4 pTM=0.425 ipTM=0.368 tol=5.25 2024-07-26 15:55:38,971 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=47.2 pTM=0.422 ipTM=0.316 tol=4.83 2024-07-26 15:55:49,572 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=47.5 pTM=0.427 ipTM=0.413 tol=17.8 2024-07-26 15:56:00,165 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=47.6 pTM=0.425 ipTM=0.385 tol=10.5 2024-07-26 15:56:10,764 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=47.4 pTM=0.432 ipTM=0.373 tol=8.28 2024-07-26 15:56:21,366 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=46.9 pTM=0.424 ipTM=0.282 tol=3.71 2024-07-26 15:56:32,004 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=47.6 pTM=0.432 ipTM=0.442 tol=4.84 2024-07-26 15:56:42,641 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=47.6 pTM=0.424 ipTM=0.412 tol=7.62 2024-07-26 15:56:53,270 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=47.6 pTM=0.429 ipTM=0.452 tol=7.31 2024-07-26 15:57:03,908 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=47.7 pTM=0.427 ipTM=0.398 tol=3.72 2024-07-26 15:57:14,551 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=47.4 pTM=0.435 ipTM=0.349 tol=3.33 2024-07-26 15:57:25,191 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=48.1 pTM=0.431 ipTM=0.453 tol=7.37 2024-07-26 15:57:35,825 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=48 pTM=0.43 ipTM=0.439 tol=4.22 2024-07-26 15:57:46,452 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=47.3 pTM=0.428 ipTM=0.328 tol=7.66 2024-07-26 15:57:57,098 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=47.2 pTM=0.426 ipTM=0.323 tol=3.03 2024-07-26 15:58:07,731 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=47.6 pTM=0.428 ipTM=0.394 tol=8.84 2024-07-26 15:58:18,367 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=47.4 pTM=0.427 ipTM=0.323 tol=3.62 2024-07-26 15:58:29,001 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=47 pTM=0.426 ipTM=0.327 tol=7.05 2024-07-26 15:58:39,650 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=47.8 pTM=0.432 ipTM=0.471 tol=3.11 2024-07-26 15:58:50,293 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=47.5 pTM=0.426 ipTM=0.374 tol=2.8 2024-07-26 15:59:00,937 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=47.4 pTM=0.429 ipTM=0.346 tol=7.64 2024-07-26 15:59:11,585 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=47.5 pTM=0.426 ipTM=0.408 tol=7.25 2024-07-26 15:59:22,245 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=47.5 pTM=0.426 ipTM=0.402 tol=3.66 2024-07-26 15:59:32,905 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=47.9 pTM=0.435 ipTM=0.38 tol=7.95 2024-07-26 15:59:43,573 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=48.2 pTM=0.429 ipTM=0.452 tol=4.48 2024-07-26 15:59:54,226 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=47.9 pTM=0.429 ipTM=0.436 tol=3.72 2024-07-26 15:59:54,226 alphafold2_multimer_v3_model_1_seed_000 took 519.8s (30 recycles) 2024-07-26 16:00:05,233 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=49 pTM=0.447 ipTM=0.617 2024-07-26 16:00:15,934 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=46.6 pTM=0.438 ipTM=0.578 tol=20.7 2024-07-26 16:00:26,646 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=47.2 pTM=0.438 ipTM=0.578 tol=12 2024-07-26 16:00:37,339 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=46.8 pTM=0.427 ipTM=0.427 tol=11.5 2024-07-26 16:00:48,025 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=46.8 pTM=0.417 ipTM=0.167 tol=14.8 2024-07-26 16:00:58,709 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=47.2 pTM=0.41 ipTM=0.21 tol=16 2024-07-26 16:01:09,393 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=47.1 pTM=0.41 ipTM=0.184 tol=9.98 2024-07-26 16:01:20,084 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=46.9 pTM=0.408 ipTM=0.182 tol=11.4 2024-07-26 16:01:30,777 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=47.1 pTM=0.409 ipTM=0.204 tol=5.71 2024-07-26 16:01:41,464 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=47.3 pTM=0.408 ipTM=0.232 tol=4.99 2024-07-26 16:01:52,168 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=47.1 pTM=0.408 ipTM=0.212 tol=6.14 2024-07-26 16:02:02,875 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=46.9 pTM=0.408 ipTM=0.176 tol=7.66 2024-07-26 16:02:13,564 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=47 pTM=0.409 ipTM=0.241 tol=8.62 2024-07-26 16:02:24,269 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=47.1 pTM=0.408 ipTM=0.225 tol=5.54 2024-07-26 16:02:34,968 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=47 pTM=0.409 ipTM=0.196 tol=3.96 2024-07-26 16:02:45,661 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=47 pTM=0.41 ipTM=0.233 tol=6.88 2024-07-26 16:02:56,373 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=46.8 pTM=0.408 ipTM=0.19 tol=3.34 2024-07-26 16:03:07,087 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=46.9 pTM=0.411 ipTM=0.249 tol=3.23 2024-07-26 16:03:17,795 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=46.9 pTM=0.41 ipTM=0.196 tol=4.35 2024-07-26 16:03:28,511 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=46.9 pTM=0.417 ipTM=0.231 tol=18.8 2024-07-26 16:03:39,207 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=48.2 pTM=0.436 ipTM=0.53 tol=15.9 2024-07-26 16:03:49,903 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=48.1 pTM=0.425 ipTM=0.37 tol=16.6 2024-07-26 16:04:00,602 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=47.8 pTM=0.424 ipTM=0.365 tol=7.14 2024-07-26 16:04:11,318 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=47.6 pTM=0.423 ipTM=0.336 tol=6.33 2024-07-26 16:04:21,999 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=48.3 pTM=0.433 ipTM=0.447 tol=9.66 2024-07-26 16:04:32,689 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=47.6 pTM=0.42 ipTM=0.318 tol=6.71 2024-07-26 16:04:43,393 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=48.2 pTM=0.433 ipTM=0.433 tol=5.02 2024-07-26 16:04:54,100 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=47.7 pTM=0.42 ipTM=0.305 tol=4.47 2024-07-26 16:05:04,820 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=48.1 pTM=0.432 ipTM=0.425 tol=4.26 2024-07-26 16:05:15,519 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=47.5 pTM=0.419 ipTM=0.27 tol=4.88 2024-07-26 16:05:26,210 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=47 pTM=0.418 ipTM=0.166 tol=9.51 2024-07-26 16:05:26,211 alphafold2_multimer_v3_model_2_seed_000 took 331.7s (30 recycles) 2024-07-26 16:05:37,272 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=47.7 pTM=0.417 ipTM=0.142 2024-07-26 16:05:48,003 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=48.2 pTM=0.418 ipTM=0.185 tol=17.7 2024-07-26 16:05:58,763 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=47.9 pTM=0.409 ipTM=0.245 tol=11.1 2024-07-26 16:06:09,533 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=47.7 pTM=0.408 ipTM=0.188 tol=5.84 2024-07-26 16:06:20,294 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=47.4 pTM=0.406 ipTM=0.149 tol=4.76 2024-07-26 16:06:31,047 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=47.5 pTM=0.409 ipTM=0.217 tol=6.99 2024-07-26 16:06:41,805 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=47.6 pTM=0.406 ipTM=0.152 tol=4.59 2024-07-26 16:06:52,560 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=47.6 pTM=0.408 ipTM=0.175 tol=5.22 2024-07-26 16:07:03,305 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=47.5 pTM=0.406 ipTM=0.15 tol=6.38 2024-07-26 16:07:14,056 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=47.7 pTM=0.409 ipTM=0.198 tol=5.27 2024-07-26 16:07:24,810 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=47.6 pTM=0.408 ipTM=0.154 tol=5.55 2024-07-26 16:07:35,573 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=47.5 pTM=0.409 ipTM=0.176 tol=3.88 2024-07-26 16:07:46,325 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=47.3 pTM=0.409 ipTM=0.155 tol=4.05 2024-07-26 16:07:57,083 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=47.5 pTM=0.41 ipTM=0.214 tol=4.06 2024-07-26 16:08:07,848 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=47.2 pTM=0.408 ipTM=0.155 tol=3.91 2024-07-26 16:08:18,611 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=47.5 pTM=0.41 ipTM=0.191 tol=3.83 2024-07-26 16:08:29,371 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=47.6 pTM=0.411 ipTM=0.18 tol=3.54 2024-07-26 16:08:40,128 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=47.4 pTM=0.41 ipTM=0.199 tol=3.15 2024-07-26 16:08:50,877 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=47.5 pTM=0.41 ipTM=0.177 tol=3.42 2024-07-26 16:09:01,627 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=47.6 pTM=0.41 ipTM=0.171 tol=4 2024-07-26 16:09:12,368 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=47.5 pTM=0.409 ipTM=0.178 tol=4.38 2024-07-26 16:09:23,099 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=47.6 pTM=0.409 ipTM=0.165 tol=10.4 2024-07-26 16:09:33,846 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=47.4 pTM=0.41 ipTM=0.173 tol=7.54 2024-07-26 16:09:44,576 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=47.4 pTM=0.412 ipTM=0.187 tol=10.3 2024-07-26 16:09:55,294 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=47.5 pTM=0.409 ipTM=0.172 tol=7.86 2024-07-26 16:10:06,015 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=47.1 pTM=0.409 ipTM=0.16 tol=5.23 2024-07-26 16:10:16,742 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=47.2 pTM=0.409 ipTM=0.153 tol=5.53 2024-07-26 16:10:27,458 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=47.5 pTM=0.408 ipTM=0.161 tol=7.27 2024-07-26 16:10:38,192 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=47.3 pTM=0.406 ipTM=0.151 tol=8.11 2024-07-26 16:10:48,918 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=47.5 pTM=0.409 ipTM=0.182 tol=9.71 2024-07-26 16:10:59,645 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=47.3 pTM=0.409 ipTM=0.154 tol=6.39 2024-07-26 16:10:59,646 alphafold2_multimer_v3_model_3_seed_000 took 333.1s (30 recycles) 2024-07-26 16:11:10,738 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=46.1 pTM=0.408 ipTM=0.132 2024-07-26 16:11:21,434 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=49.2 pTM=0.441 ipTM=0.568 tol=22 2024-07-26 16:11:32,142 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=47.6 pTM=0.414 ipTM=0.329 tol=13.2 2024-07-26 16:11:42,852 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=48.4 pTM=0.427 ipTM=0.468 tol=13.2 2024-07-26 16:11:53,581 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=46.7 pTM=0.4 ipTM=0.176 tol=8.52 2024-07-26 16:12:04,289 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=47.1 pTM=0.413 ipTM=0.311 tol=14.4 2024-07-26 16:12:14,997 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=46.4 pTM=0.4 ipTM=0.158 tol=10.9 2024-07-26 16:12:25,707 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=45.9 pTM=0.404 ipTM=0.247 tol=11.4 2024-07-26 16:12:36,452 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=45.8 pTM=0.401 ipTM=0.158 tol=9.24 2024-07-26 16:12:47,210 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=46.1 pTM=0.402 ipTM=0.155 tol=10.5 2024-07-26 16:12:57,938 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=46 pTM=0.401 ipTM=0.158 tol=8.24 2024-07-26 16:13:08,688 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=46.2 pTM=0.406 ipTM=0.166 tol=6.92 2024-07-26 16:13:19,448 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=46.4 pTM=0.399 ipTM=0.16 tol=5.35 2024-07-26 16:13:30,200 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=46.4 pTM=0.407 ipTM=0.186 tol=7.34 2024-07-26 16:13:40,953 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=46.2 pTM=0.397 ipTM=0.161 tol=7.23 2024-07-26 16:13:51,706 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=46.4 pTM=0.408 ipTM=0.177 tol=12.3 2024-07-26 16:14:02,456 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=47.7 pTM=0.414 ipTM=0.321 tol=11.9 2024-07-26 16:14:13,207 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=47 pTM=0.408 ipTM=0.208 tol=5.95 2024-07-26 16:14:23,972 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=47.1 pTM=0.41 ipTM=0.222 tol=18.2 2024-07-26 16:14:34,710 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=47.1 pTM=0.41 ipTM=0.198 tol=14 2024-07-26 16:14:45,443 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=48.7 pTM=0.436 ipTM=0.544 tol=13.6 2024-07-26 16:14:56,174 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=47.8 pTM=0.414 ipTM=0.339 tol=5.91 2024-07-26 16:15:06,933 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=46.4 pTM=0.403 ipTM=0.147 tol=10.8 2024-07-26 16:15:17,635 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=46.8 pTM=0.409 ipTM=0.312 tol=19.5 2024-07-26 16:15:28,360 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=46 pTM=0.404 ipTM=0.156 tol=16.5 2024-07-26 16:15:39,109 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=46.1 pTM=0.401 ipTM=0.155 tol=6.29 2024-07-26 16:15:49,850 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=46.3 pTM=0.402 ipTM=0.152 tol=5.54 2024-07-26 16:16:00,597 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=46.5 pTM=0.41 ipTM=0.176 tol=20.5 2024-07-26 16:16:11,337 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=49.8 pTM=0.445 ipTM=0.623 tol=15.7 2024-07-26 16:16:22,060 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=49 pTM=0.425 ipTM=0.414 tol=13.4 2024-07-26 16:16:32,778 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=48.7 pTM=0.422 ipTM=0.401 tol=5.39 2024-07-26 16:16:32,779 alphafold2_multimer_v3_model_4_seed_000 took 332.8s (30 recycles) 2024-07-26 16:16:43,891 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=46.8 pTM=0.408 ipTM=0.291 2024-07-26 16:16:54,670 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=46.6 pTM=0.406 ipTM=0.176 tol=20 2024-07-26 16:17:05,455 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=46.4 pTM=0.406 ipTM=0.141 tol=11.9 2024-07-26 16:17:16,255 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=47.3 pTM=0.421 ipTM=0.308 tol=13.3 2024-07-26 16:17:27,046 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=46.8 pTM=0.407 ipTM=0.161 tol=12.1 2024-07-26 16:17:37,840 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=46.3 pTM=0.406 ipTM=0.178 tol=11.7 2024-07-26 16:17:48,641 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=46.6 pTM=0.407 ipTM=0.165 tol=11.6 2024-07-26 16:17:59,437 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=47.6 pTM=0.409 ipTM=0.184 tol=13 2024-07-26 16:18:10,231 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=47.1 pTM=0.404 ipTM=0.157 tol=10.3 2024-07-26 16:18:21,021 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=46.6 pTM=0.405 ipTM=0.154 tol=7.41 2024-07-26 16:18:31,783 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=46.6 pTM=0.405 ipTM=0.151 tol=7.39 2024-07-26 16:18:42,556 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=47.4 pTM=0.408 ipTM=0.189 tol=7.18 2024-07-26 16:18:53,339 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=46.9 pTM=0.401 ipTM=0.15 tol=5.94 2024-07-26 16:19:04,129 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=46.7 pTM=0.405 ipTM=0.151 tol=6.93 2024-07-26 16:19:14,910 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=46.8 pTM=0.403 ipTM=0.155 tol=7.05 2024-07-26 16:19:25,687 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=46.4 pTM=0.405 ipTM=0.16 tol=4.39 2024-07-26 16:19:36,462 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=47.1 pTM=0.404 ipTM=0.154 tol=5.54 2024-07-26 16:19:47,240 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=46.4 pTM=0.404 ipTM=0.155 tol=7.14 2024-07-26 16:19:58,015 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=46.8 pTM=0.405 ipTM=0.158 tol=10.2 2024-07-26 16:20:08,786 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=46.4 pTM=0.405 ipTM=0.155 tol=8.11 2024-07-26 16:20:19,571 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=47 pTM=0.403 ipTM=0.163 tol=8.12 2024-07-26 16:20:30,356 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=46.5 pTM=0.405 ipTM=0.157 tol=9.32 2024-07-26 16:20:41,157 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=46.9 pTM=0.403 ipTM=0.157 tol=5.84 2024-07-26 16:20:51,942 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=46.3 pTM=0.404 ipTM=0.156 tol=3.34 2024-07-26 16:21:02,739 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=46.4 pTM=0.402 ipTM=0.157 tol=4.7 2024-07-26 16:21:13,547 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=46.8 pTM=0.405 ipTM=0.15 tol=6.76 2024-07-26 16:21:24,347 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=47.5 pTM=0.409 ipTM=0.195 tol=5.32 2024-07-26 16:21:35,140 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=47.6 pTM=0.408 ipTM=0.188 tol=6.23 2024-07-26 16:21:45,957 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=47.1 pTM=0.406 ipTM=0.171 tol=9.3 2024-07-26 16:21:56,766 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=47 pTM=0.415 ipTM=0.318 tol=11.9 2024-07-26 16:22:07,577 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=46.2 pTM=0.404 ipTM=0.153 tol=8.87 2024-07-26 16:22:07,577 alphafold2_multimer_v3_model_5_seed_000 took 334.5s (30 recycles) 2024-07-26 16:22:07,906 reranking models by 'multimer' metric 2024-07-26 16:22:11,066 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-26 16:23:25,340 Relaxation took 77.4s 2024-07-26 16:23:25,340 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=47.9 pTM=0.429 ipTM=0.436 2024-07-26 16:24:26,641 Relaxation took 61.3s 2024-07-26 16:24:26,642 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=48.7 pTM=0.422 ipTM=0.401 2024-07-26 16:25:53,517 Relaxation took 86.9s 2024-07-26 16:25:53,518 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=47 pTM=0.418 ipTM=0.166 2024-07-26 16:27:29,108 Relaxation took 95.6s 2024-07-26 16:27:29,108 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=47.3 pTM=0.409 ipTM=0.154 2024-07-26 16:28:46,611 Relaxation took 77.5s 2024-07-26 16:28:46,611 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=46.2 pTM=0.404 ipTM=0.153 2024-07-26 16:28:47,928 Done