2024-07-26 17:11:46,558 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-26 17:11:46,980 Running on GPU 2024-07-26 17:11:52,142 Found 6 citations for tools or databases 2024-07-26 17:11:52,142 Query 1/1: GATA6_SPSB1 (length 868) 2024-07-26 17:11:57,455 Setting max_seq=508, max_extra_seq=2048 2024-07-26 17:15:22,683 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=43.8 pTM=0.347 ipTM=0.157 2024-07-26 17:15:42,383 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=43.1 pTM=0.355 ipTM=0.174 tol=16.3 2024-07-26 17:16:02,191 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=42.9 pTM=0.355 ipTM=0.174 tol=14.4 2024-07-26 17:16:22,013 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=43.1 pTM=0.358 ipTM=0.239 tol=13.7 2024-07-26 17:16:41,864 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=44.7 pTM=0.388 ipTM=0.657 tol=6.97 2024-07-26 17:17:01,735 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=44.7 pTM=0.385 ipTM=0.635 tol=7.27 2024-07-26 17:17:21,625 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=44.5 pTM=0.387 ipTM=0.641 tol=5.28 2024-07-26 17:17:41,481 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=44.7 pTM=0.388 ipTM=0.653 tol=5.02 2024-07-26 17:18:01,324 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=44.6 pTM=0.388 ipTM=0.649 tol=4.58 2024-07-26 17:18:21,228 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=44.7 pTM=0.391 ipTM=0.663 tol=4.25 2024-07-26 17:18:41,090 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=44.9 pTM=0.391 ipTM=0.662 tol=3.55 2024-07-26 17:19:00,998 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=44.8 pTM=0.393 ipTM=0.67 tol=3.12 2024-07-26 17:19:20,925 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=44.7 pTM=0.392 ipTM=0.656 tol=3.39 2024-07-26 17:19:40,788 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=44.8 pTM=0.392 ipTM=0.671 tol=3.53 2024-07-26 17:20:00,732 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=44.8 pTM=0.394 ipTM=0.668 tol=3.14 2024-07-26 17:20:20,615 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=45 pTM=0.395 ipTM=0.691 tol=4.25 2024-07-26 17:20:40,511 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=45.1 pTM=0.393 ipTM=0.655 tol=3.91 2024-07-26 17:21:00,438 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=45.2 pTM=0.394 ipTM=0.697 tol=3.28 2024-07-26 17:21:20,362 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=44.9 pTM=0.391 ipTM=0.648 tol=3.59 2024-07-26 17:21:40,326 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=45.2 pTM=0.391 ipTM=0.669 tol=4.46 2024-07-26 17:22:00,269 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=45 pTM=0.388 ipTM=0.647 tol=4.62 2024-07-26 17:22:20,224 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=45.4 pTM=0.394 ipTM=0.683 tol=3.56 2024-07-26 17:22:40,133 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=45 pTM=0.391 ipTM=0.648 tol=5.12 2024-07-26 17:23:00,053 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=45.2 pTM=0.392 ipTM=0.676 tol=3.66 2024-07-26 17:23:20,056 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=45 pTM=0.392 ipTM=0.655 tol=4.34 2024-07-26 17:23:40,036 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=45 pTM=0.392 ipTM=0.675 tol=2.99 2024-07-26 17:24:00,053 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=44.9 pTM=0.391 ipTM=0.663 tol=3.19 2024-07-26 17:24:20,057 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=45.3 pTM=0.394 ipTM=0.694 tol=3.21 2024-07-26 17:24:40,045 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=44.9 pTM=0.392 ipTM=0.663 tol=3.57 2024-07-26 17:25:00,074 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=45 pTM=0.392 ipTM=0.674 tol=3.65 2024-07-26 17:25:20,063 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=44.9 pTM=0.392 ipTM=0.657 tol=3.03 2024-07-26 17:25:20,063 alphafold2_multimer_v3_model_1_seed_000 took 790.5s (30 recycles) 2024-07-26 17:25:40,678 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=43.3 pTM=0.333 ipTM=0.129 2024-07-26 17:26:00,685 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=43 pTM=0.346 ipTM=0.235 tol=20.8 2024-07-26 17:26:20,745 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=42.7 pTM=0.344 ipTM=0.199 tol=16 2024-07-26 17:26:40,776 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=42.8 pTM=0.352 ipTM=0.213 tol=12.4 2024-07-26 17:27:00,845 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=43.4 pTM=0.356 ipTM=0.201 tol=7.56 2024-07-26 17:27:20,885 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=43.7 pTM=0.36 ipTM=0.228 tol=7.69 2024-07-26 17:27:40,929 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=43.8 pTM=0.359 ipTM=0.21 tol=5.43 2024-07-26 17:28:00,959 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=44 pTM=0.362 ipTM=0.243 tol=4.43 2024-07-26 17:28:20,950 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=45.1 pTM=0.39 ipTM=0.609 tol=6.09 2024-07-26 17:28:40,937 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=44.9 pTM=0.388 ipTM=0.597 tol=6.66 2024-07-26 17:29:00,899 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=44.8 pTM=0.387 ipTM=0.582 tol=5.12 2024-07-26 17:29:20,900 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=44.7 pTM=0.388 ipTM=0.57 tol=5.1 2024-07-26 17:29:40,859 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=44.7 pTM=0.385 ipTM=0.552 tol=3.56 2024-07-26 17:30:00,876 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=44.6 pTM=0.383 ipTM=0.537 tol=3.31 2024-07-26 17:30:20,856 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=44.9 pTM=0.39 ipTM=0.607 tol=7.67 2024-07-26 17:30:40,842 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=44.8 pTM=0.387 ipTM=0.591 tol=2.89 2024-07-26 17:31:00,857 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=45 pTM=0.391 ipTM=0.609 tol=3.33 2024-07-26 17:31:20,777 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=44.9 pTM=0.389 ipTM=0.605 tol=3.34 2024-07-26 17:31:40,690 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=44.8 pTM=0.387 ipTM=0.579 tol=2.92 2024-07-26 17:32:00,642 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=44.7 pTM=0.385 ipTM=0.557 tol=2.85 2024-07-26 17:32:20,574 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=45 pTM=0.387 ipTM=0.596 tol=4.35 2024-07-26 17:32:40,519 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=44.6 pTM=0.381 ipTM=0.535 tol=2.59 2024-07-26 17:33:00,443 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=45.1 pTM=0.39 ipTM=0.625 tol=3.14 2024-07-26 17:33:20,396 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=44.8 pTM=0.386 ipTM=0.585 tol=2.67 2024-07-26 17:33:40,346 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=44.9 pTM=0.389 ipTM=0.607 tol=2 2024-07-26 17:34:00,300 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=44.8 pTM=0.387 ipTM=0.585 tol=3.24 2024-07-26 17:34:20,250 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=44.8 pTM=0.385 ipTM=0.595 tol=4.08 2024-07-26 17:34:40,217 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=45 pTM=0.387 ipTM=0.611 tol=4.18 2024-07-26 17:35:00,168 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=45 pTM=0.391 ipTM=0.628 tol=4.25 2024-07-26 17:35:20,199 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=44.9 pTM=0.388 ipTM=0.597 tol=4.68 2024-07-26 17:35:40,166 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=45.2 pTM=0.391 ipTM=0.629 tol=4.27 2024-07-26 17:35:40,167 alphafold2_multimer_v3_model_2_seed_000 took 619.5s (30 recycles) 2024-07-26 17:36:00,869 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=44.3 pTM=0.356 ipTM=0.427 2024-07-26 17:36:20,965 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=43.9 pTM=0.352 ipTM=0.217 tol=18 2024-07-26 17:36:41,036 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=43.5 pTM=0.354 ipTM=0.217 tol=12.8 2024-07-26 17:37:01,139 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=43.4 pTM=0.354 ipTM=0.21 tol=9.88 2024-07-26 17:37:21,245 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=43.2 pTM=0.354 ipTM=0.228 tol=7.03 2024-07-26 17:37:41,366 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=43.4 pTM=0.353 ipTM=0.213 tol=7.07 2024-07-26 17:38:01,492 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=43.5 pTM=0.352 ipTM=0.197 tol=4.49 2024-07-26 17:38:21,550 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=43.6 pTM=0.354 ipTM=0.221 tol=4.91 2024-07-26 17:38:41,587 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=43.4 pTM=0.352 ipTM=0.197 tol=2.81 2024-07-26 17:39:01,614 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=43.4 pTM=0.354 ipTM=0.206 tol=7.75 2024-07-26 17:39:21,651 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=43.5 pTM=0.353 ipTM=0.227 tol=10.6 2024-07-26 17:39:41,689 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=43.3 pTM=0.354 ipTM=0.204 tol=11.8 2024-07-26 17:40:01,723 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=43 pTM=0.355 ipTM=0.209 tol=16.6 2024-07-26 17:40:21,761 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=43.4 pTM=0.354 ipTM=0.213 tol=15.6 2024-07-26 17:40:41,794 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=43.3 pTM=0.355 ipTM=0.214 tol=4.21 2024-07-26 17:41:01,829 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=43.4 pTM=0.357 ipTM=0.213 tol=3.38 2024-07-26 17:41:21,882 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=43.4 pTM=0.353 ipTM=0.193 tol=8.02 2024-07-26 17:41:41,914 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=43.5 pTM=0.356 ipTM=0.223 tol=8.7 2024-07-26 17:42:01,947 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=43.5 pTM=0.354 ipTM=0.211 tol=8.48 2024-07-26 17:42:21,980 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=43.5 pTM=0.355 ipTM=0.217 tol=8.38 2024-07-26 17:42:42,022 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=43.6 pTM=0.356 ipTM=0.229 tol=3.74 2024-07-26 17:43:02,064 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=43.5 pTM=0.353 ipTM=0.206 tol=3.61 2024-07-26 17:43:22,104 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=43.6 pTM=0.354 ipTM=0.2 tol=3.41 2024-07-26 17:43:42,143 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=43.5 pTM=0.354 ipTM=0.197 tol=4.33 2024-07-26 17:44:02,189 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=43.5 pTM=0.354 ipTM=0.193 tol=7.82 2024-07-26 17:44:22,235 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=43.4 pTM=0.354 ipTM=0.206 tol=8.36 2024-07-26 17:44:42,308 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=43.4 pTM=0.354 ipTM=0.221 tol=3.66 2024-07-26 17:45:02,339 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=43.6 pTM=0.352 ipTM=0.199 tol=7.68 2024-07-26 17:45:22,381 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=43.5 pTM=0.354 ipTM=0.215 tol=8.19 2024-07-26 17:45:42,432 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=43.3 pTM=0.351 ipTM=0.202 tol=3.36 2024-07-26 17:46:02,477 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=43.5 pTM=0.355 ipTM=0.218 tol=2.68 2024-07-26 17:46:02,478 alphafold2_multimer_v3_model_3_seed_000 took 621.7s (30 recycles) 2024-07-26 17:46:23,053 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=41.9 pTM=0.341 ipTM=0.271 2024-07-26 17:46:43,042 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=42.7 pTM=0.349 ipTM=0.209 tol=17.2 2024-07-26 17:47:03,034 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=42.5 pTM=0.344 ipTM=0.186 tol=14.4 2024-07-26 17:47:23,053 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=42.6 pTM=0.341 ipTM=0.184 tol=8.69 2024-07-26 17:47:43,083 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=42.7 pTM=0.342 ipTM=0.198 tol=9.51 2024-07-26 17:48:03,109 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=42.6 pTM=0.341 ipTM=0.177 tol=8.16 2024-07-26 17:48:23,137 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=42.5 pTM=0.339 ipTM=0.189 tol=6.87 2024-07-26 17:48:43,157 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=42 pTM=0.335 ipTM=0.168 tol=7.91 2024-07-26 17:49:03,170 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=41.8 pTM=0.337 ipTM=0.171 tol=4.73 2024-07-26 17:49:23,195 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=41.3 pTM=0.333 ipTM=0.151 tol=5.34 2024-07-26 17:49:43,215 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=40.8 pTM=0.336 ipTM=0.173 tol=14.8 2024-07-26 17:50:03,215 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=41.3 pTM=0.339 ipTM=0.233 tol=15.8 2024-07-26 17:50:23,226 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=41 pTM=0.333 ipTM=0.203 tol=10.2 2024-07-26 17:50:43,238 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=41.2 pTM=0.337 ipTM=0.228 tol=6.5 2024-07-26 17:51:03,276 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=41.1 pTM=0.334 ipTM=0.223 tol=8.16 2024-07-26 17:51:23,274 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=41.2 pTM=0.344 ipTM=0.314 tol=10.5 2024-07-26 17:51:43,281 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=41.1 pTM=0.335 ipTM=0.217 tol=8.69 2024-07-26 17:52:03,288 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=41.1 pTM=0.344 ipTM=0.34 tol=8.74 2024-07-26 17:52:23,296 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=41.1 pTM=0.336 ipTM=0.294 tol=8.42 2024-07-26 17:52:43,308 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=41.4 pTM=0.347 ipTM=0.409 tol=7.65 2024-07-26 17:53:03,310 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=42.2 pTM=0.356 ipTM=0.543 tol=8.49 2024-07-26 17:53:23,343 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=41.5 pTM=0.339 ipTM=0.36 tol=7.35 2024-07-26 17:53:43,375 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=41 pTM=0.335 ipTM=0.319 tol=5.24 2024-07-26 17:54:03,389 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=40.9 pTM=0.329 ipTM=0.22 tol=4.59 2024-07-26 17:54:23,404 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=41.8 pTM=0.344 ipTM=0.374 tol=7.96 2024-07-26 17:54:43,422 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=41.1 pTM=0.333 ipTM=0.251 tol=9.43 2024-07-26 17:55:03,425 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=41.2 pTM=0.346 ipTM=0.388 tol=9.45 2024-07-26 17:55:23,428 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=41.9 pTM=0.349 ipTM=0.459 tol=6.93 2024-07-26 17:55:43,442 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=41.2 pTM=0.339 ipTM=0.336 tol=7.74 2024-07-26 17:56:03,451 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=41.2 pTM=0.333 ipTM=0.234 tol=8.72 2024-07-26 17:56:23,435 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=41 pTM=0.34 ipTM=0.299 tol=6.34 2024-07-26 17:56:23,436 alphafold2_multimer_v3_model_4_seed_000 took 620.4s (30 recycles) 2024-07-26 17:56:44,107 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=42.6 pTM=0.346 ipTM=0.286 2024-07-26 17:57:04,176 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=43 pTM=0.346 ipTM=0.172 tol=14.5 2024-07-26 17:57:24,252 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=43.1 pTM=0.352 ipTM=0.177 tol=5.78 2024-07-26 17:57:44,318 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=43.4 pTM=0.352 ipTM=0.17 tol=7.17 2024-07-26 17:58:04,404 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=43.1 pTM=0.353 ipTM=0.171 tol=4.32 2024-07-26 17:58:24,487 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=43.4 pTM=0.354 ipTM=0.207 tol=8.32 2024-07-26 17:58:44,582 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=43.2 pTM=0.351 ipTM=0.156 tol=7.84 2024-07-26 17:59:04,665 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=43.2 pTM=0.351 ipTM=0.165 tol=7.43 2024-07-26 17:59:24,769 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=43.2 pTM=0.353 ipTM=0.161 tol=3.82 2024-07-26 17:59:44,855 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=43.1 pTM=0.353 ipTM=0.162 tol=7.68 2024-07-26 18:00:04,954 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=43.1 pTM=0.353 ipTM=0.16 tol=8.53 2024-07-26 18:00:25,041 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=43.4 pTM=0.356 ipTM=0.18 tol=8.02 2024-07-26 18:00:45,121 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=43.2 pTM=0.356 ipTM=0.172 tol=8.8 2024-07-26 18:01:05,207 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=43.2 pTM=0.352 ipTM=0.176 tol=8.02 2024-07-26 18:01:25,292 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=43.1 pTM=0.353 ipTM=0.16 tol=5.4 2024-07-26 18:01:45,374 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=43 pTM=0.353 ipTM=0.163 tol=8.27 2024-07-26 18:02:05,453 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=43 pTM=0.352 ipTM=0.153 tol=8.79 2024-07-26 18:02:25,536 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=43.2 pTM=0.353 ipTM=0.16 tol=7.16 2024-07-26 18:02:45,623 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=43.2 pTM=0.35 ipTM=0.156 tol=5.84 2024-07-26 18:03:05,699 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=43.3 pTM=0.351 ipTM=0.16 tol=8.74 2024-07-26 18:03:25,790 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=43.2 pTM=0.351 ipTM=0.157 tol=5.18 2024-07-26 18:03:45,875 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=43.2 pTM=0.349 ipTM=0.151 tol=10.2 2024-07-26 18:04:05,966 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=43.2 pTM=0.354 ipTM=0.158 tol=4.03 2024-07-26 18:04:26,051 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=43.2 pTM=0.351 ipTM=0.152 tol=9.22 2024-07-26 18:04:46,152 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=43.1 pTM=0.352 ipTM=0.178 tol=3.47 2024-07-26 18:05:06,237 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=43.2 pTM=0.351 ipTM=0.158 tol=4.46 2024-07-26 18:05:26,329 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=43 pTM=0.352 ipTM=0.171 tol=6.58 2024-07-26 18:05:46,419 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=43.1 pTM=0.35 ipTM=0.16 tol=5.1 2024-07-26 18:06:06,516 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=43.1 pTM=0.353 ipTM=0.172 tol=9.46 2024-07-26 18:06:26,611 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=43.1 pTM=0.351 ipTM=0.159 tol=9.34 2024-07-26 18:06:46,716 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=43 pTM=0.354 ipTM=0.159 tol=4.03 2024-07-26 18:06:46,717 alphafold2_multimer_v3_model_5_seed_000 took 622.7s (30 recycles) 2024-07-26 18:06:47,318 reranking models by 'multimer' metric 2024-07-26 18:06:53,688 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-26 18:08:48,245 Relaxation took 120.9s 2024-07-26 18:08:48,245 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=44.9 pTM=0.392 ipTM=0.657 2024-07-26 18:10:17,677 Relaxation took 89.4s 2024-07-26 18:10:17,677 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=45.2 pTM=0.391 ipTM=0.629 2024-07-26 18:11:55,480 Relaxation took 97.8s 2024-07-26 18:11:55,480 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=41 pTM=0.34 ipTM=0.299 2024-07-26 18:13:24,189 Relaxation took 88.7s 2024-07-26 18:13:24,190 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=43.5 pTM=0.355 ipTM=0.218 2024-07-26 18:14:59,083 Relaxation took 94.9s 2024-07-26 18:14:59,083 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=43 pTM=0.354 ipTM=0.159 2024-07-26 18:15:00,889 Done