2024-07-26 17:12:59,941 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-26 17:13:00,313 Running on GPU 2024-07-26 17:13:11,456 Found 6 citations for tools or databases 2024-07-26 17:13:11,456 Query 1/1: GATA6_WDR5 (length 929) 2024-07-26 17:13:17,645 Setting max_seq=508, max_extra_seq=2048 2024-07-26 17:16:36,330 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=46.8 pTM=0.414 ipTM=0.252 2024-07-26 17:16:56,046 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=46.7 pTM=0.426 ipTM=0.338 tol=13 2024-07-26 17:17:15,818 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=46.8 pTM=0.427 ipTM=0.355 tol=7.26 2024-07-26 17:17:35,642 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=47 pTM=0.425 ipTM=0.364 tol=4.89 2024-07-26 17:17:55,527 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=47 pTM=0.431 ipTM=0.36 tol=4.21 2024-07-26 17:18:15,442 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=46.9 pTM=0.425 ipTM=0.356 tol=3.22 2024-07-26 17:18:35,382 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=47 pTM=0.431 ipTM=0.352 tol=3.64 2024-07-26 17:18:55,357 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=47.2 pTM=0.424 ipTM=0.337 tol=3.82 2024-07-26 17:19:15,348 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=47.1 pTM=0.428 ipTM=0.334 tol=4.05 2024-07-26 17:19:35,345 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=47.1 pTM=0.424 ipTM=0.334 tol=5.79 2024-07-26 17:19:55,338 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=46.9 pTM=0.427 ipTM=0.353 tol=3.44 2024-07-26 17:20:15,362 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=47 pTM=0.425 ipTM=0.338 tol=5.3 2024-07-26 17:20:35,383 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=47.1 pTM=0.432 ipTM=0.342 tol=7.7 2024-07-26 17:20:55,384 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=47.2 pTM=0.427 ipTM=0.35 tol=5.52 2024-07-26 17:21:15,389 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=47.1 pTM=0.43 ipTM=0.365 tol=4.09 2024-07-26 17:21:35,369 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=47.3 pTM=0.431 ipTM=0.354 tol=5.76 2024-07-26 17:21:55,342 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=47.1 pTM=0.429 ipTM=0.341 tol=5.45 2024-07-26 17:22:15,336 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=47 pTM=0.425 ipTM=0.336 tol=4.84 2024-07-26 17:22:35,338 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=46.9 pTM=0.429 ipTM=0.353 tol=5.08 2024-07-26 17:22:55,345 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=47.2 pTM=0.435 ipTM=0.367 tol=5.16 2024-07-26 17:23:15,352 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=47.1 pTM=0.428 ipTM=0.337 tol=4.47 2024-07-26 17:23:35,362 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=47 pTM=0.425 ipTM=0.304 tol=4.11 2024-07-26 17:23:55,359 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=47 pTM=0.426 ipTM=0.331 tol=7.25 2024-07-26 17:24:15,356 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=47.1 pTM=0.424 ipTM=0.314 tol=4.8 2024-07-26 17:24:35,366 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=47.1 pTM=0.426 ipTM=0.335 tol=3.33 2024-07-26 17:24:55,358 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=47.1 pTM=0.431 ipTM=0.353 tol=4.43 2024-07-26 17:25:15,345 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=48 pTM=0.439 ipTM=0.525 tol=4.39 2024-07-26 17:25:35,335 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=48.9 pTM=0.456 ipTM=0.723 tol=4.18 2024-07-26 17:25:55,318 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=49.4 pTM=0.46 ipTM=0.763 tol=5.67 2024-07-26 17:26:15,306 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=49.5 pTM=0.461 ipTM=0.791 tol=3.86 2024-07-26 17:26:35,304 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=49.8 pTM=0.461 ipTM=0.792 tol=5.24 2024-07-26 17:26:35,305 alphafold2_multimer_v3_model_1_seed_000 took 782.4s (30 recycles) 2024-07-26 17:26:55,814 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=46.3 pTM=0.417 ipTM=0.221 2024-07-26 17:27:15,816 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=46.9 pTM=0.425 ipTM=0.231 tol=16.8 2024-07-26 17:27:35,840 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=46.9 pTM=0.422 ipTM=0.189 tol=11 2024-07-26 17:27:55,874 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=46.8 pTM=0.423 ipTM=0.192 tol=6.95 2024-07-26 17:28:15,927 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=46.7 pTM=0.42 ipTM=0.19 tol=7.72 2024-07-26 17:28:35,967 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=46.6 pTM=0.418 ipTM=0.185 tol=5.73 2024-07-26 17:28:56,020 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=46.5 pTM=0.416 ipTM=0.184 tol=6.34 2024-07-26 17:29:16,083 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=46.7 pTM=0.419 ipTM=0.205 tol=5.79 2024-07-26 17:29:36,129 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=46.6 pTM=0.419 ipTM=0.206 tol=6.94 2024-07-26 17:29:56,176 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=46.5 pTM=0.425 ipTM=0.226 tol=8.84 2024-07-26 17:30:16,199 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=46.4 pTM=0.422 ipTM=0.211 tol=7.67 2024-07-26 17:30:36,229 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=46.6 pTM=0.43 ipTM=0.297 tol=6.75 2024-07-26 17:30:56,251 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=47.2 pTM=0.433 ipTM=0.406 tol=9.97 2024-07-26 17:31:16,295 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=49.8 pTM=0.462 ipTM=0.822 tol=7.93 2024-07-26 17:31:36,341 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=49.7 pTM=0.459 ipTM=0.804 tol=9.3 2024-07-26 17:31:56,392 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=49.7 pTM=0.46 ipTM=0.804 tol=5.82 2024-07-26 17:32:16,433 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=49.8 pTM=0.461 ipTM=0.818 tol=3.94 2024-07-26 17:32:36,477 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=49.7 pTM=0.463 ipTM=0.823 tol=3.85 2024-07-26 17:32:56,517 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=49.7 pTM=0.463 ipTM=0.825 tol=3.87 2024-07-26 17:33:16,560 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=49.8 pTM=0.465 ipTM=0.829 tol=3.88 2024-07-26 17:33:36,611 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=49.7 pTM=0.465 ipTM=0.83 tol=4.16 2024-07-26 17:33:56,671 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=49.8 pTM=0.464 ipTM=0.833 tol=3.26 2024-07-26 17:34:16,728 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=49.8 pTM=0.465 ipTM=0.841 tol=4.09 2024-07-26 17:34:36,799 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=50 pTM=0.466 ipTM=0.848 tol=5.55 2024-07-26 17:34:56,857 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=49.9 pTM=0.468 ipTM=0.845 tol=5.68 2024-07-26 17:35:16,910 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=49.9 pTM=0.466 ipTM=0.846 tol=2.92 2024-07-26 17:35:36,946 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=50.1 pTM=0.466 ipTM=0.846 tol=1.73 2024-07-26 17:35:56,984 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=50 pTM=0.466 ipTM=0.846 tol=1.66 2024-07-26 17:36:17,049 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=50 pTM=0.466 ipTM=0.849 tol=2.09 2024-07-26 17:36:37,098 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=49.9 pTM=0.465 ipTM=0.846 tol=3.12 2024-07-26 17:36:57,161 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=50 pTM=0.464 ipTM=0.845 tol=7.97 2024-07-26 17:36:57,161 alphafold2_multimer_v3_model_2_seed_000 took 621.3s (30 recycles) 2024-07-26 17:37:17,806 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=46.7 pTM=0.425 ipTM=0.231 2024-07-26 17:37:37,963 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=47.8 pTM=0.447 ipTM=0.523 tol=22 2024-07-26 17:37:58,130 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=49 pTM=0.456 ipTM=0.604 tol=14.2 2024-07-26 17:38:18,315 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=51.3 pTM=0.474 ipTM=0.815 tol=11.1 2024-07-26 17:38:38,490 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=51.2 pTM=0.473 ipTM=0.818 tol=9.06 2024-07-26 17:38:58,664 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=51.3 pTM=0.474 ipTM=0.824 tol=7.43 2024-07-26 17:39:18,835 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=51.4 pTM=0.476 ipTM=0.833 tol=10.8 2024-07-26 17:39:39,027 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=51.6 pTM=0.475 ipTM=0.843 tol=4.91 2024-07-26 17:39:59,225 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=51.6 pTM=0.475 ipTM=0.846 tol=6.95 2024-07-26 17:40:19,426 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=51.7 pTM=0.476 ipTM=0.85 tol=3.28 2024-07-26 17:40:39,618 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=51.5 pTM=0.475 ipTM=0.842 tol=2.32 2024-07-26 17:40:59,814 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=51.4 pTM=0.476 ipTM=0.841 tol=4.17 2024-07-26 17:41:19,984 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=51.3 pTM=0.478 ipTM=0.841 tol=7.97 2024-07-26 17:41:40,154 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=51.3 pTM=0.478 ipTM=0.837 tol=8.01 2024-07-26 17:42:00,327 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=51.3 pTM=0.477 ipTM=0.836 tol=7.43 2024-07-26 17:42:20,495 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=51.2 pTM=0.476 ipTM=0.837 tol=6.86 2024-07-26 17:42:40,663 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=51.3 pTM=0.476 ipTM=0.842 tol=10.1 2024-07-26 17:43:00,846 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=51.4 pTM=0.478 ipTM=0.841 tol=4.88 2024-07-26 17:43:21,012 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=51.4 pTM=0.477 ipTM=0.84 tol=10.5 2024-07-26 17:43:41,192 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=51.5 pTM=0.479 ipTM=0.84 tol=5.48 2024-07-26 17:44:01,372 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=51.4 pTM=0.478 ipTM=0.837 tol=2.86 2024-07-26 17:44:21,546 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=51.4 pTM=0.478 ipTM=0.839 tol=3.28 2024-07-26 17:44:41,727 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=51.4 pTM=0.479 ipTM=0.836 tol=2.59 2024-07-26 17:45:01,891 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=51.6 pTM=0.479 ipTM=0.84 tol=2.42 2024-07-26 17:45:22,066 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=51.3 pTM=0.477 ipTM=0.837 tol=2.43 2024-07-26 17:45:42,265 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=51.3 pTM=0.478 ipTM=0.841 tol=3.73 2024-07-26 17:46:02,446 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=51.4 pTM=0.478 ipTM=0.84 tol=7.2 2024-07-26 17:46:22,607 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=51.2 pTM=0.477 ipTM=0.835 tol=3.85 2024-07-26 17:46:42,782 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=51.4 pTM=0.479 ipTM=0.836 tol=1.72 2024-07-26 17:47:02,950 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=51.4 pTM=0.479 ipTM=0.842 tol=3.05 2024-07-26 17:47:23,130 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=51.3 pTM=0.477 ipTM=0.839 tol=11.3 2024-07-26 17:47:23,130 alphafold2_multimer_v3_model_3_seed_000 took 625.4s (30 recycles) 2024-07-26 17:47:43,733 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=46 pTM=0.442 ipTM=0.426 2024-07-26 17:48:03,831 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=46.1 pTM=0.435 ipTM=0.361 tol=20.8 2024-07-26 17:48:23,984 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=46.1 pTM=0.425 ipTM=0.306 tol=16.8 2024-07-26 17:48:44,141 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=46.2 pTM=0.435 ipTM=0.393 tol=17.8 2024-07-26 17:49:04,294 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=46.4 pTM=0.432 ipTM=0.343 tol=14.5 2024-07-26 17:49:24,429 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=46.4 pTM=0.435 ipTM=0.391 tol=11.7 2024-07-26 17:49:44,587 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=46.7 pTM=0.431 ipTM=0.36 tol=8.73 2024-07-26 17:50:04,736 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=46.5 pTM=0.432 ipTM=0.355 tol=7.18 2024-07-26 17:50:24,898 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=46.5 pTM=0.427 ipTM=0.333 tol=6.07 2024-07-26 17:50:45,037 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=46.5 pTM=0.433 ipTM=0.33 tol=6.77 2024-07-26 17:51:05,184 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=46.4 pTM=0.432 ipTM=0.395 tol=5.91 2024-07-26 17:51:25,306 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=46.8 pTM=0.439 ipTM=0.397 tol=4.79 2024-07-26 17:51:45,430 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=46.7 pTM=0.435 ipTM=0.388 tol=6.03 2024-07-26 17:52:05,543 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=46.8 pTM=0.438 ipTM=0.427 tol=8.62 2024-07-26 17:52:25,639 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=46.8 pTM=0.435 ipTM=0.408 tol=6.71 2024-07-26 17:52:45,756 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=46.7 pTM=0.44 ipTM=0.399 tol=10.3 2024-07-26 17:53:05,869 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=46.6 pTM=0.438 ipTM=0.392 tol=12.7 2024-07-26 17:53:25,973 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=46.7 pTM=0.437 ipTM=0.398 tol=9.81 2024-07-26 17:53:46,098 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=46.4 pTM=0.433 ipTM=0.369 tol=6.65 2024-07-26 17:54:06,217 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=46.5 pTM=0.434 ipTM=0.357 tol=5.41 2024-07-26 17:54:26,347 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=46.6 pTM=0.431 ipTM=0.367 tol=6.94 2024-07-26 17:54:46,462 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=46.2 pTM=0.432 ipTM=0.339 tol=6.62 2024-07-26 17:55:06,582 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=46.4 pTM=0.428 ipTM=0.337 tol=9.44 2024-07-26 17:55:26,672 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=46.6 pTM=0.434 ipTM=0.329 tol=6.26 2024-07-26 17:55:46,799 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=46.6 pTM=0.429 ipTM=0.337 tol=5.02 2024-07-26 17:56:06,918 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=46.4 pTM=0.432 ipTM=0.346 tol=8.36 2024-07-26 17:56:27,036 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=46.4 pTM=0.432 ipTM=0.376 tol=7.23 2024-07-26 17:56:47,153 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=46.6 pTM=0.439 ipTM=0.412 tol=5.27 2024-07-26 17:57:07,290 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=46.5 pTM=0.436 ipTM=0.406 tol=7.24 2024-07-26 17:57:27,417 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=46.9 pTM=0.438 ipTM=0.405 tol=7.12 2024-07-26 17:57:47,544 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=46.8 pTM=0.436 ipTM=0.404 tol=5.99 2024-07-26 17:57:47,544 alphafold2_multimer_v3_model_4_seed_000 took 623.9s (30 recycles) 2024-07-26 17:58:08,247 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=46.2 pTM=0.425 ipTM=0.293 2024-07-26 17:58:28,406 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=46.8 pTM=0.436 ipTM=0.449 tol=24.3 2024-07-26 17:58:48,585 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=47.2 pTM=0.438 ipTM=0.315 tol=9.98 2024-07-26 17:59:08,777 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=46.8 pTM=0.434 ipTM=0.251 tol=8.45 2024-07-26 17:59:28,971 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=46.8 pTM=0.431 ipTM=0.284 tol=8.47 2024-07-26 17:59:49,155 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=47.1 pTM=0.438 ipTM=0.311 tol=5.67 2024-07-26 18:00:09,353 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=47 pTM=0.437 ipTM=0.286 tol=6.07 2024-07-26 18:00:29,545 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=46.9 pTM=0.431 ipTM=0.254 tol=3.13 2024-07-26 18:00:49,728 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=47.1 pTM=0.438 ipTM=0.3 tol=5.43 2024-07-26 18:01:09,901 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=47.1 pTM=0.437 ipTM=0.299 tol=5.31 2024-07-26 18:01:30,079 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=46.9 pTM=0.436 ipTM=0.294 tol=3.3 2024-07-26 18:01:50,252 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=46.9 pTM=0.436 ipTM=0.27 tol=4.64 2024-07-26 18:02:10,421 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=46.9 pTM=0.438 ipTM=0.298 tol=4.61 2024-07-26 18:02:30,592 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=47.1 pTM=0.441 ipTM=0.327 tol=4.84 2024-07-26 18:02:50,767 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=46.9 pTM=0.437 ipTM=0.301 tol=4.01 2024-07-26 18:03:10,945 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=47 pTM=0.435 ipTM=0.335 tol=4.31 2024-07-26 18:03:31,120 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=47 pTM=0.441 ipTM=0.291 tol=4.72 2024-07-26 18:03:51,290 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=46.8 pTM=0.43 ipTM=0.262 tol=2.3 2024-07-26 18:04:11,473 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=46.9 pTM=0.438 ipTM=0.29 tol=2.51 2024-07-26 18:04:31,670 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=46.8 pTM=0.434 ipTM=0.263 tol=1.74 2024-07-26 18:04:51,870 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=47.1 pTM=0.438 ipTM=0.28 tol=3.91 2024-07-26 18:05:12,063 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=46.9 pTM=0.435 ipTM=0.3 tol=4.33 2024-07-26 18:05:32,262 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=47 pTM=0.441 ipTM=0.294 tol=2.12 2024-07-26 18:05:52,473 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=47.1 pTM=0.433 ipTM=0.302 tol=4.43 2024-07-26 18:06:12,678 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=47.2 pTM=0.437 ipTM=0.279 tol=2.46 2024-07-26 18:06:32,877 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=47 pTM=0.437 ipTM=0.274 tol=3.7 2024-07-26 18:06:53,060 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=47.2 pTM=0.441 ipTM=0.291 tol=2 2024-07-26 18:07:13,233 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=46.8 pTM=0.43 ipTM=0.27 tol=4.73 2024-07-26 18:07:33,380 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=47 pTM=0.44 ipTM=0.297 tol=3.12 2024-07-26 18:07:53,564 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=46.8 pTM=0.436 ipTM=0.299 tol=5.23 2024-07-26 18:08:13,756 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=46.9 pTM=0.434 ipTM=0.295 tol=4.11 2024-07-26 18:08:13,756 alphafold2_multimer_v3_model_5_seed_000 took 625.7s (30 recycles) 2024-07-26 18:08:14,294 reranking models by 'multimer' metric 2024-07-26 18:08:17,287 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-26 18:09:29,592 Relaxation took 75.3s 2024-07-26 18:09:29,592 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=50 pTM=0.464 ipTM=0.845 2024-07-26 18:10:33,382 Relaxation took 63.8s 2024-07-26 18:10:33,382 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=51.3 pTM=0.477 ipTM=0.839 2024-07-26 18:11:33,376 Relaxation took 60.0s 2024-07-26 18:11:33,376 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=49.8 pTM=0.461 ipTM=0.792 2024-07-26 18:12:55,145 Relaxation took 81.8s 2024-07-26 18:12:55,145 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=46.8 pTM=0.436 ipTM=0.404 2024-07-26 18:14:26,641 Relaxation took 91.5s 2024-07-26 18:14:26,642 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=46.9 pTM=0.434 ipTM=0.295 2024-07-26 18:14:28,976 Done