2024-07-26 18:57:08,843 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-26 18:57:09,216 Running on GPU
2024-07-26 18:57:13,035 Found 6 citations for tools or databases
2024-07-26 18:57:13,035 Query 1/1: HOXB7_FEM1A (length 886)
2024-07-26 18:57:18,961 Setting max_seq=508, max_extra_seq=2048
2024-07-26 19:01:00,432 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=70.1 pTM=0.676 ipTM=0.234
2024-07-26 19:01:21,137 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=71.1 pTM=0.688 ipTM=0.485 tol=6.69
2024-07-26 19:01:41,890 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=71.9 pTM=0.687 ipTM=0.578 tol=3.07
2024-07-26 19:02:02,704 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=72.2 pTM=0.689 ipTM=0.588 tol=2.54
2024-07-26 19:02:23,539 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=72.3 pTM=0.688 ipTM=0.596 tol=2.07
2024-07-26 19:02:44,407 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=72.3 pTM=0.688 ipTM=0.596 tol=1.13
2024-07-26 19:03:05,319 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=72.4 pTM=0.689 ipTM=0.599 tol=1.31
2024-07-26 19:03:26,223 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=72.2 pTM=0.688 ipTM=0.6 tol=1.07
2024-07-26 19:03:47,145 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=72.2 pTM=0.685 ipTM=0.591 tol=2.21
2024-07-26 19:04:08,088 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=71.9 pTM=0.685 ipTM=0.567 tol=1.47
2024-07-26 19:04:29,057 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=72.1 pTM=0.687 ipTM=0.556 tol=2.37
2024-07-26 19:04:50,036 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=72.2 pTM=0.688 ipTM=0.552 tol=2.33
2024-07-26 19:05:11,026 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=72.2 pTM=0.687 ipTM=0.547 tol=1.1
2024-07-26 19:05:32,004 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=72.2 pTM=0.688 ipTM=0.551 tol=0.857
2024-07-26 19:05:52,982 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=72 pTM=0.686 ipTM=0.562 tol=1.66
2024-07-26 19:06:13,994 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=72.2 pTM=0.688 ipTM=0.586 tol=1.74
2024-07-26 19:06:34,990 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=72.2 pTM=0.688 ipTM=0.571 tol=1.27
2024-07-26 19:06:55,987 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=72.1 pTM=0.688 ipTM=0.567 tol=1.04
2024-07-26 19:07:16,985 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=72.3 pTM=0.689 ipTM=0.574 tol=0.884
2024-07-26 19:07:37,976 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=72.2 pTM=0.688 ipTM=0.575 tol=1.06
2024-07-26 19:07:58,959 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=72.1 pTM=0.688 ipTM=0.577 tol=0.845
2024-07-26 19:08:19,966 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=72.2 pTM=0.689 ipTM=0.573 tol=0.697
2024-07-26 19:08:40,959 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=72.2 pTM=0.689 ipTM=0.555 tol=0.696
2024-07-26 19:09:01,962 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=72.2 pTM=0.688 ipTM=0.563 tol=1.17
2024-07-26 19:09:22,952 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=72.1 pTM=0.688 ipTM=0.568 tol=1.7
2024-07-26 19:09:43,919 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=72.1 pTM=0.688 ipTM=0.567 tol=1.2
2024-07-26 19:10:04,911 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=72 pTM=0.688 ipTM=0.552 tol=0.801
2024-07-26 19:10:25,893 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=72.1 pTM=0.687 ipTM=0.566 tol=0.843
2024-07-26 19:10:46,884 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=72.1 pTM=0.686 ipTM=0.553 tol=1.2
2024-07-26 19:11:07,849 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=72 pTM=0.685 ipTM=0.551 tol=1.2
2024-07-26 19:11:28,832 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=72.1 pTM=0.688 ipTM=0.559 tol=1.16
2024-07-26 19:11:28,833 alphafold2_multimer_v3_model_1_seed_000 took 842.5s (30 recycles)
2024-07-26 19:11:50,443 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=69.6 pTM=0.667 ipTM=0.229
2024-07-26 19:12:11,472 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=70.8 pTM=0.667 ipTM=0.203 tol=7.49
2024-07-26 19:12:32,498 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=71.4 pTM=0.669 ipTM=0.212 tol=12.2
2024-07-26 19:12:53,526 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=71.2 pTM=0.671 ipTM=0.212 tol=3.93
2024-07-26 19:13:14,579 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=71.2 pTM=0.669 ipTM=0.208 tol=3.95
2024-07-26 19:13:35,589 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=71.2 pTM=0.667 ipTM=0.203 tol=8.34
2024-07-26 19:13:56,618 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=71.6 pTM=0.67 ipTM=0.211 tol=3.63
2024-07-26 19:14:17,623 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=71.4 pTM=0.669 ipTM=0.206 tol=4.76
2024-07-26 19:14:38,690 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=71.6 pTM=0.675 ipTM=0.229 tol=2.1
2024-07-26 19:14:59,728 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=71.4 pTM=0.673 ipTM=0.22 tol=2.21
2024-07-26 19:15:20,745 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=71.6 pTM=0.677 ipTM=0.308 tol=3.77
2024-07-26 19:15:41,796 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=71.7 pTM=0.676 ipTM=0.423 tol=2.23
2024-07-26 19:16:02,861 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=71.7 pTM=0.675 ipTM=0.385 tol=2.42
2024-07-26 19:16:23,883 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=71.8 pTM=0.676 ipTM=0.372 tol=3.2
2024-07-26 19:16:44,890 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=71.8 pTM=0.676 ipTM=0.373 tol=2.29
2024-07-26 19:17:05,904 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=71.9 pTM=0.677 ipTM=0.359 tol=3.19
2024-07-26 19:17:26,938 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=72.1 pTM=0.679 ipTM=0.405 tol=3.41
2024-07-26 19:17:47,988 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=71.8 pTM=0.678 ipTM=0.33 tol=3.18
2024-07-26 19:18:09,003 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=71.6 pTM=0.676 ipTM=0.382 tol=2.84
2024-07-26 19:18:30,032 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=71.7 pTM=0.676 ipTM=0.331 tol=4.22
2024-07-26 19:18:51,051 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=71.7 pTM=0.675 ipTM=0.381 tol=6.12
2024-07-26 19:19:12,099 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=71.8 pTM=0.678 ipTM=0.362 tol=4.92
2024-07-26 19:19:33,127 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=71.9 pTM=0.677 ipTM=0.397 tol=5.23
2024-07-26 19:19:54,153 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=71.7 pTM=0.676 ipTM=0.343 tol=2.93
2024-07-26 19:20:15,174 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=71.7 pTM=0.675 ipTM=0.381 tol=2.94
2024-07-26 19:20:36,203 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=71.6 pTM=0.676 ipTM=0.343 tol=2.41
2024-07-26 19:20:57,218 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=71.6 pTM=0.675 ipTM=0.376 tol=2.21
2024-07-26 19:21:18,232 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=71.8 pTM=0.676 ipTM=0.341 tol=2.27
2024-07-26 19:21:39,283 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=71.6 pTM=0.674 ipTM=0.372 tol=1.81
2024-07-26 19:22:00,307 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=71.8 pTM=0.677 ipTM=0.371 tol=1.54
2024-07-26 19:22:21,335 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=71.8 pTM=0.675 ipTM=0.38 tol=1.93
2024-07-26 19:22:21,336 alphafold2_multimer_v3_model_2_seed_000 took 651.9s (30 recycles)
2024-07-26 19:22:42,891 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=70.5 pTM=0.675 ipTM=0.272
2024-07-26 19:23:03,926 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=71.4 pTM=0.675 ipTM=0.231 tol=6.63
2024-07-26 19:23:24,922 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=71.6 pTM=0.678 ipTM=0.253 tol=7.19
2024-07-26 19:23:45,896 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=71.4 pTM=0.676 ipTM=0.243 tol=4.33
2024-07-26 19:24:06,872 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=71.4 pTM=0.678 ipTM=0.248 tol=4.12
2024-07-26 19:24:27,880 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=71.4 pTM=0.685 ipTM=0.318 tol=5.05
2024-07-26 19:24:48,894 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=71.9 pTM=0.677 ipTM=0.297 tol=5.25
2024-07-26 19:25:09,886 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=71.7 pTM=0.682 ipTM=0.299 tol=2.63
2024-07-26 19:25:30,885 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=71.6 pTM=0.675 ipTM=0.276 tol=1.44
2024-07-26 19:25:51,880 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=71.6 pTM=0.681 ipTM=0.285 tol=1.64
2024-07-26 19:26:12,878 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=71.6 pTM=0.679 ipTM=0.285 tol=1.29
2024-07-26 19:26:33,852 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=71.6 pTM=0.68 ipTM=0.292 tol=3.26
2024-07-26 19:26:54,869 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=71.5 pTM=0.681 ipTM=0.3 tol=3.55
2024-07-26 19:27:15,852 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=71.4 pTM=0.678 ipTM=0.286 tol=3.28
2024-07-26 19:27:36,826 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=71.2 pTM=0.679 ipTM=0.279 tol=1.83
2024-07-26 19:27:57,835 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=71.2 pTM=0.676 ipTM=0.264 tol=1.99
2024-07-26 19:28:18,839 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=71.1 pTM=0.68 ipTM=0.292 tol=2.75
2024-07-26 19:28:39,833 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=71.4 pTM=0.677 ipTM=0.288 tol=3.65
2024-07-26 19:29:00,816 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=71.2 pTM=0.679 ipTM=0.285 tol=8.07
2024-07-26 19:29:21,795 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=71.2 pTM=0.679 ipTM=0.289 tol=6.67
2024-07-26 19:29:42,791 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=71.2 pTM=0.677 ipTM=0.285 tol=3.57
2024-07-26 19:30:03,785 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=71.3 pTM=0.679 ipTM=0.294 tol=1.65
2024-07-26 19:30:24,745 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=71.2 pTM=0.676 ipTM=0.276 tol=2.59
2024-07-26 19:30:45,732 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=71.3 pTM=0.682 ipTM=0.29 tol=2.99
2024-07-26 19:31:06,679 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=71.2 pTM=0.676 ipTM=0.279 tol=2.88
2024-07-26 19:31:27,649 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=71.3 pTM=0.679 ipTM=0.279 tol=2.15
2024-07-26 19:31:48,621 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=71.3 pTM=0.679 ipTM=0.292 tol=1.02
2024-07-26 19:32:09,588 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=71.3 pTM=0.677 ipTM=0.287 tol=1.01
2024-07-26 19:32:30,572 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=71.3 pTM=0.679 ipTM=0.284 tol=1.39
2024-07-26 19:32:51,551 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=71.4 pTM=0.678 ipTM=0.287 tol=1.2
2024-07-26 19:33:12,523 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=71.3 pTM=0.679 ipTM=0.296 tol=1.28
2024-07-26 19:33:12,523 alphafold2_multimer_v3_model_3_seed_000 took 650.6s (30 recycles)
2024-07-26 19:33:34,074 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=69.4 pTM=0.658 ipTM=0.222
2024-07-26 19:33:55,039 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=70.2 pTM=0.671 ipTM=0.243 tol=9.85
2024-07-26 19:34:16,013 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=71.9 pTM=0.689 ipTM=0.628 tol=4.84
2024-07-26 19:34:36,988 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=72.2 pTM=0.686 ipTM=0.635 tol=4.89
2024-07-26 19:34:57,963 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=72.3 pTM=0.688 ipTM=0.642 tol=3.44
2024-07-26 19:35:18,944 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=72.2 pTM=0.688 ipTM=0.641 tol=2.63
2024-07-26 19:35:39,926 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=72.5 pTM=0.689 ipTM=0.644 tol=1.36
2024-07-26 19:36:00,894 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=72.2 pTM=0.688 ipTM=0.64 tol=2.32
2024-07-26 19:36:21,873 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=72.2 pTM=0.686 ipTM=0.635 tol=2.83
2024-07-26 19:36:42,843 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=72 pTM=0.687 ipTM=0.632 tol=1.65
2024-07-26 19:37:03,815 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=72.2 pTM=0.689 ipTM=0.652 tol=1.37
2024-07-26 19:37:24,801 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=72.4 pTM=0.688 ipTM=0.647 tol=2.39
2024-07-26 19:37:45,788 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=72.5 pTM=0.689 ipTM=0.647 tol=1.74
2024-07-26 19:38:06,777 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=72.3 pTM=0.688 ipTM=0.646 tol=1.86
2024-07-26 19:38:27,780 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=72.2 pTM=0.687 ipTM=0.638 tol=1.82
2024-07-26 19:38:48,770 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=72.2 pTM=0.688 ipTM=0.629 tol=2.79
2024-07-26 19:39:09,781 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=72.4 pTM=0.69 ipTM=0.641 tol=2.66
2024-07-26 19:39:30,799 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=72.3 pTM=0.689 ipTM=0.643 tol=4.14
2024-07-26 19:39:51,803 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=72.3 pTM=0.689 ipTM=0.651 tol=3.01
2024-07-26 19:40:12,803 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=72.2 pTM=0.689 ipTM=0.641 tol=1.71
2024-07-26 19:40:33,805 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=72.2 pTM=0.69 ipTM=0.654 tol=2.22
2024-07-26 19:40:54,825 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=72.4 pTM=0.689 ipTM=0.649 tol=1.86
2024-07-26 19:41:15,824 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=72.5 pTM=0.691 ipTM=0.651 tol=1.53
2024-07-26 19:41:36,816 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=72.2 pTM=0.688 ipTM=0.643 tol=1.42
2024-07-26 19:41:57,792 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=72.2 pTM=0.689 ipTM=0.645 tol=4.88
2024-07-26 19:42:18,782 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=72.4 pTM=0.692 ipTM=0.653 tol=3.4
2024-07-26 19:42:39,774 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=72.5 pTM=0.695 ipTM=0.645 tol=1.59
2024-07-26 19:43:00,736 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=72.2 pTM=0.689 ipTM=0.626 tol=3.57
2024-07-26 19:43:21,723 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=72.3 pTM=0.692 ipTM=0.642 tol=3.63
2024-07-26 19:43:42,703 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=72.4 pTM=0.69 ipTM=0.646 tol=2.18
2024-07-26 19:44:03,692 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=72.5 pTM=0.694 ipTM=0.661 tol=1.75
2024-07-26 19:44:03,692 alphafold2_multimer_v3_model_4_seed_000 took 650.5s (30 recycles)
2024-07-26 19:44:25,292 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=70.7 pTM=0.667 ipTM=0.216
2024-07-26 19:44:46,323 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=71.5 pTM=0.67 ipTM=0.206 tol=5.56
2024-07-26 19:45:07,341 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=71.9 pTM=0.672 ipTM=0.214 tol=5.33
2024-07-26 19:45:28,374 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=71.9 pTM=0.674 ipTM=0.214 tol=3.51
2024-07-26 19:45:49,417 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=72.1 pTM=0.678 ipTM=0.225 tol=2.37
2024-07-26 19:46:10,453 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=72.1 pTM=0.677 ipTM=0.224 tol=1.49
2024-07-26 19:46:31,494 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=72.4 pTM=0.677 ipTM=0.245 tol=1.93
2024-07-26 19:46:52,527 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=72.2 pTM=0.676 ipTM=0.241 tol=3.57
2024-07-26 19:47:13,562 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=72.4 pTM=0.678 ipTM=0.254 tol=3.09
2024-07-26 19:47:34,596 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=72.2 pTM=0.678 ipTM=0.234 tol=2.58
2024-07-26 19:47:55,627 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=72.3 pTM=0.678 ipTM=0.236 tol=1.55
2024-07-26 19:48:16,668 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=72.2 pTM=0.679 ipTM=0.24 tol=1.76
2024-07-26 19:48:37,711 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=72.5 pTM=0.681 ipTM=0.245 tol=1.68
2024-07-26 19:48:58,745 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=72.2 pTM=0.679 ipTM=0.258 tol=1.52
2024-07-26 19:49:19,784 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=72.1 pTM=0.679 ipTM=0.271 tol=2.21
2024-07-26 19:49:40,819 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=72.1 pTM=0.678 ipTM=0.271 tol=1.99
2024-07-26 19:50:01,871 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=72.4 pTM=0.681 ipTM=0.285 tol=1.68
2024-07-26 19:50:22,906 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=72.2 pTM=0.68 ipTM=0.306 tol=1.22
2024-07-26 19:50:43,933 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=72.1 pTM=0.681 ipTM=0.291 tol=3.63
2024-07-26 19:51:04,951 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=72.2 pTM=0.681 ipTM=0.266 tol=4.31
2024-07-26 19:51:25,977 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=71.9 pTM=0.678 ipTM=0.262 tol=2.43
2024-07-26 19:51:47,044 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=72.3 pTM=0.682 ipTM=0.295 tol=1.38
2024-07-26 19:52:08,083 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=72.1 pTM=0.679 ipTM=0.264 tol=2.36
2024-07-26 19:52:29,151 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=72.1 pTM=0.679 ipTM=0.251 tol=2.3
2024-07-26 19:52:50,199 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=72.1 pTM=0.678 ipTM=0.262 tol=1.96
2024-07-26 19:53:11,255 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=72.1 pTM=0.679 ipTM=0.274 tol=1.88
2024-07-26 19:53:32,304 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=72.1 pTM=0.681 ipTM=0.293 tol=1.56
2024-07-26 19:53:53,341 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=72.1 pTM=0.679 ipTM=0.266 tol=2.55
2024-07-26 19:54:14,385 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=72.1 pTM=0.679 ipTM=0.259 tol=2.57
2024-07-26 19:54:35,420 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=72.1 pTM=0.678 ipTM=0.263 tol=1.69
2024-07-26 19:54:56,465 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=71.9 pTM=0.679 ipTM=0.278 tol=2.23
2024-07-26 19:54:56,465 alphafold2_multimer_v3_model_5_seed_000 took 652.2s (30 recycles)
2024-07-26 19:54:57,079 reranking models by 'multimer' metric
2024-07-26 19:54:58,394 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-26 19:56:15,875 Relaxation took 78.8s
2024-07-26 19:56:15,875 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=72.5 pTM=0.694 ipTM=0.661
2024-07-26 19:57:40,369 Relaxation took 84.5s
2024-07-26 19:57:40,369 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=72.1 pTM=0.688 ipTM=0.559
2024-07-26 19:58:53,024 Relaxation took 72.7s
2024-07-26 19:58:53,024 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=71.8 pTM=0.675 ipTM=0.38
2024-07-26 20:00:46,389 Relaxation took 113.4s
2024-07-26 20:00:46,390 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=71.3 pTM=0.679 ipTM=0.296
2024-07-26 20:02:05,928 Relaxation took 79.5s
2024-07-26 20:02:05,928 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=71.9 pTM=0.679 ipTM=0.278
2024-07-26 20:02:07,814 Done