2024-07-26 19:10:17,608 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-26 19:10:17,911 Running on GPU
2024-07-26 19:10:21,593 Found 6 citations for tools or databases
2024-07-26 19:10:21,593 Query 1/1: HOXC9_KCTD17 (length 574)
2024-07-26 19:10:26,610 Setting max_seq=508, max_extra_seq=2048
2024-07-26 19:13:29,978 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=42.9 pTM=0.254 ipTM=0.134
2024-07-26 19:13:36,967 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=43.2 pTM=0.258 ipTM=0.136 tol=11.6
2024-07-26 19:13:43,957 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=42.5 pTM=0.258 ipTM=0.132 tol=9.75
2024-07-26 19:13:50,955 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=42.5 pTM=0.258 ipTM=0.132 tol=5.88
2024-07-26 19:13:57,961 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=42.5 pTM=0.259 ipTM=0.131 tol=5.95
2024-07-26 19:14:04,972 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=42.8 pTM=0.258 ipTM=0.135 tol=4.39
2024-07-26 19:14:11,984 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=42.5 pTM=0.258 ipTM=0.138 tol=4.7
2024-07-26 19:14:18,998 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=43 pTM=0.257 ipTM=0.146 tol=3.83
2024-07-26 19:14:26,026 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=42.5 pTM=0.256 ipTM=0.139 tol=3.75
2024-07-26 19:14:33,051 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=42.9 pTM=0.258 ipTM=0.141 tol=3.08
2024-07-26 19:14:40,076 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=42.6 pTM=0.259 ipTM=0.139 tol=2.56
2024-07-26 19:14:47,117 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=42.6 pTM=0.259 ipTM=0.144 tol=4.14
2024-07-26 19:14:54,153 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=42.6 pTM=0.258 ipTM=0.138 tol=3
2024-07-26 19:15:01,191 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=42.8 pTM=0.258 ipTM=0.142 tol=2.68
2024-07-26 19:15:08,236 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=43 pTM=0.258 ipTM=0.139 tol=3.64
2024-07-26 19:15:15,275 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=43 pTM=0.258 ipTM=0.146 tol=3.37
2024-07-26 19:15:22,316 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=42.7 pTM=0.259 ipTM=0.142 tol=3.83
2024-07-26 19:15:29,359 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=42.6 pTM=0.258 ipTM=0.141 tol=3.6
2024-07-26 19:15:36,404 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=42.6 pTM=0.26 ipTM=0.139 tol=1.66
2024-07-26 19:15:43,451 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=42.8 pTM=0.259 ipTM=0.142 tol=3.22
2024-07-26 19:15:50,504 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=43.3 pTM=0.26 ipTM=0.141 tol=3.13
2024-07-26 19:15:57,557 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=42.9 pTM=0.257 ipTM=0.14 tol=1.71
2024-07-26 19:16:04,612 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=42.6 pTM=0.259 ipTM=0.138 tol=3.33
2024-07-26 19:16:11,671 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=43.1 pTM=0.259 ipTM=0.14 tol=3.55
2024-07-26 19:16:18,729 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=42.8 pTM=0.259 ipTM=0.138 tol=2.96
2024-07-26 19:16:25,791 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=42.7 pTM=0.258 ipTM=0.142 tol=3.01
2024-07-26 19:16:32,844 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=42.9 pTM=0.259 ipTM=0.141 tol=3.79
2024-07-26 19:16:39,899 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=43.1 pTM=0.259 ipTM=0.143 tol=2.47
2024-07-26 19:16:46,953 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=42.9 pTM=0.258 ipTM=0.142 tol=1.45
2024-07-26 19:16:54,010 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=42.5 pTM=0.259 ipTM=0.144 tol=4.18
2024-07-26 19:17:01,069 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=42.8 pTM=0.258 ipTM=0.141 tol=2.89
2024-07-26 19:17:01,069 alphafold2_multimer_v3_model_1_seed_000 took 383.7s (30 recycles)
2024-07-26 19:17:08,346 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=44.3 pTM=0.261 ipTM=0.177
2024-07-26 19:17:15,414 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=46 pTM=0.271 ipTM=0.223 tol=10.6
2024-07-26 19:17:22,486 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=45.8 pTM=0.27 ipTM=0.217 tol=6.29
2024-07-26 19:17:29,557 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=45.9 pTM=0.269 ipTM=0.221 tol=2.94
2024-07-26 19:17:36,628 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=46 pTM=0.274 ipTM=0.228 tol=2.86
2024-07-26 19:17:43,708 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=46.3 pTM=0.279 ipTM=0.234 tol=1.61
2024-07-26 19:17:50,788 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=46.7 pTM=0.29 ipTM=0.255 tol=1.36
2024-07-26 19:17:57,866 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=47 pTM=0.293 ipTM=0.262 tol=1.72
2024-07-26 19:18:04,945 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=46.8 pTM=0.291 ipTM=0.257 tol=2.12
2024-07-26 19:18:12,021 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=47 pTM=0.292 ipTM=0.258 tol=1.97
2024-07-26 19:18:19,109 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=47 pTM=0.292 ipTM=0.259 tol=1.34
2024-07-26 19:18:26,187 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=47.3 pTM=0.297 ipTM=0.269 tol=1.3
2024-07-26 19:18:33,262 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=46.8 pTM=0.288 ipTM=0.253 tol=1.08
2024-07-26 19:18:40,348 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=46.9 pTM=0.291 ipTM=0.257 tol=1.32
2024-07-26 19:18:47,436 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=47.1 pTM=0.294 ipTM=0.266 tol=1.23
2024-07-26 19:18:54,517 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=47.1 pTM=0.294 ipTM=0.262 tol=1.65
2024-07-26 19:19:01,597 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=47.1 pTM=0.294 ipTM=0.261 tol=1.47
2024-07-26 19:19:08,681 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=47.1 pTM=0.296 ipTM=0.266 tol=1
2024-07-26 19:19:15,757 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=47 pTM=0.295 ipTM=0.265 tol=2.13
2024-07-26 19:19:22,831 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=46.8 pTM=0.292 ipTM=0.26 tol=1.75
2024-07-26 19:19:29,905 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=47.1 pTM=0.295 ipTM=0.263 tol=1.47
2024-07-26 19:19:36,981 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=47 pTM=0.295 ipTM=0.264 tol=2.26
2024-07-26 19:19:44,057 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=47.1 pTM=0.296 ipTM=0.262 tol=1.82
2024-07-26 19:19:51,128 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=47 pTM=0.292 ipTM=0.259 tol=1.45
2024-07-26 19:19:58,199 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=47 pTM=0.293 ipTM=0.26 tol=1.76
2024-07-26 19:20:05,266 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=47.1 pTM=0.293 ipTM=0.259 tol=1.39
2024-07-26 19:20:12,336 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=47.2 pTM=0.296 ipTM=0.26 tol=2.02
2024-07-26 19:20:19,406 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=47.3 pTM=0.296 ipTM=0.261 tol=2.49
2024-07-26 19:20:26,479 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=47.4 pTM=0.297 ipTM=0.265 tol=2.04
2024-07-26 19:20:33,553 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=47.2 pTM=0.293 ipTM=0.258 tol=2.16
2024-07-26 19:20:40,624 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=47.5 pTM=0.297 ipTM=0.263 tol=1.44
2024-07-26 19:20:40,625 alphafold2_multimer_v3_model_2_seed_000 took 219.3s (30 recycles)
2024-07-26 19:20:47,957 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=42.3 pTM=0.253 ipTM=0.125
2024-07-26 19:20:55,096 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=42.6 pTM=0.251 ipTM=0.144 tol=12.5
2024-07-26 19:21:02,227 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=42.1 pTM=0.255 ipTM=0.142 tol=12.4
2024-07-26 19:21:09,350 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=41.9 pTM=0.255 ipTM=0.148 tol=6.04
2024-07-26 19:21:16,477 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=42.1 pTM=0.253 ipTM=0.149 tol=5.02
2024-07-26 19:21:23,595 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=42.3 pTM=0.254 ipTM=0.15 tol=6.05
2024-07-26 19:21:30,710 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=42.2 pTM=0.253 ipTM=0.157 tol=3.41
2024-07-26 19:21:37,828 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=42.1 pTM=0.251 ipTM=0.155 tol=5.73
2024-07-26 19:21:44,946 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=42.7 pTM=0.253 ipTM=0.158 tol=5.65
2024-07-26 19:21:52,064 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=43.1 pTM=0.251 ipTM=0.16 tol=2.75
2024-07-26 19:21:59,183 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=43.1 pTM=0.251 ipTM=0.167 tol=5.98
2024-07-26 19:22:06,303 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=44 pTM=0.254 ipTM=0.189 tol=4.04
2024-07-26 19:22:13,416 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=43.4 pTM=0.252 ipTM=0.169 tol=3.71
2024-07-26 19:22:20,528 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=44.9 pTM=0.268 ipTM=0.214 tol=3.37
2024-07-26 19:22:27,641 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=44.3 pTM=0.251 ipTM=0.178 tol=4.8
2024-07-26 19:22:34,747 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=44.9 pTM=0.267 ipTM=0.213 tol=3.28
2024-07-26 19:22:41,856 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=44 pTM=0.252 ipTM=0.172 tol=3.12
2024-07-26 19:22:48,955 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=45.3 pTM=0.283 ipTM=0.238 tol=2.93
2024-07-26 19:22:56,068 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=44.5 pTM=0.251 ipTM=0.182 tol=2.71
2024-07-26 19:23:03,173 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=45.5 pTM=0.276 ipTM=0.228 tol=2.45
2024-07-26 19:23:10,280 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=45.1 pTM=0.252 ipTM=0.188 tol=2.72
2024-07-26 19:23:17,387 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=45.4 pTM=0.27 ipTM=0.219 tol=2.74
2024-07-26 19:23:24,496 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=45.2 pTM=0.261 ipTM=0.203 tol=3.59
2024-07-26 19:23:31,591 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=46.3 pTM=0.286 ipTM=0.246 tol=5.92
2024-07-26 19:23:38,688 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=46.5 pTM=0.28 ipTM=0.236 tol=6.25
2024-07-26 19:23:45,791 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=46.3 pTM=0.28 ipTM=0.237 tol=3.18
2024-07-26 19:23:52,891 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=46.2 pTM=0.279 ipTM=0.234 tol=2.41
2024-07-26 19:23:59,992 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=46.3 pTM=0.278 ipTM=0.233 tol=5.58
2024-07-26 19:24:07,093 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=46.3 pTM=0.275 ipTM=0.227 tol=3.09
2024-07-26 19:24:14,195 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=46.5 pTM=0.282 ipTM=0.239 tol=3.29
2024-07-26 19:24:21,297 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=46.5 pTM=0.276 ipTM=0.229 tol=2.75
2024-07-26 19:24:21,298 alphafold2_multimer_v3_model_3_seed_000 took 220.5s (30 recycles)
2024-07-26 19:24:28,630 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=42.9 pTM=0.257 ipTM=0.141
2024-07-26 19:24:35,740 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=43.7 pTM=0.255 ipTM=0.183 tol=11.1
2024-07-26 19:24:42,853 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=43.8 pTM=0.256 ipTM=0.163 tol=5.69
2024-07-26 19:24:49,959 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=43.4 pTM=0.254 ipTM=0.164 tol=2.92
2024-07-26 19:24:57,064 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=43.5 pTM=0.254 ipTM=0.153 tol=2.96
2024-07-26 19:25:04,163 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=44.1 pTM=0.255 ipTM=0.183 tol=2.85
2024-07-26 19:25:11,265 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=43.6 pTM=0.256 ipTM=0.17 tol=2.22
2024-07-26 19:25:18,358 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=43.9 pTM=0.256 ipTM=0.184 tol=2.12
2024-07-26 19:25:25,452 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=43.5 pTM=0.261 ipTM=0.168 tol=2.44
2024-07-26 19:25:32,541 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=43.3 pTM=0.259 ipTM=0.155 tol=2.38
2024-07-26 19:25:39,636 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=43.2 pTM=0.265 ipTM=0.157 tol=2.64
2024-07-26 19:25:46,736 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=43.7 pTM=0.26 ipTM=0.16 tol=2.7
2024-07-26 19:25:53,836 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=43 pTM=0.263 ipTM=0.153 tol=1.98
2024-07-26 19:26:00,936 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=43.5 pTM=0.262 ipTM=0.154 tol=1.9
2024-07-26 19:26:08,035 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=43.2 pTM=0.263 ipTM=0.16 tol=2.09
2024-07-26 19:26:15,125 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=43.7 pTM=0.262 ipTM=0.17 tol=3.32
2024-07-26 19:26:22,219 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=43.4 pTM=0.262 ipTM=0.157 tol=2.46
2024-07-26 19:26:29,308 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=43.3 pTM=0.263 ipTM=0.165 tol=1.85
2024-07-26 19:26:36,395 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=43.3 pTM=0.265 ipTM=0.172 tol=2.72
2024-07-26 19:26:43,485 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=43.5 pTM=0.261 ipTM=0.166 tol=2.1
2024-07-26 19:26:50,578 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=43.3 pTM=0.26 ipTM=0.16 tol=1.6
2024-07-26 19:26:57,673 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=43.7 pTM=0.262 ipTM=0.162 tol=2.44
2024-07-26 19:27:04,766 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=43.6 pTM=0.262 ipTM=0.169 tol=1.91
2024-07-26 19:27:11,860 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=43.8 pTM=0.26 ipTM=0.172 tol=1.72
2024-07-26 19:27:18,953 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=44.2 pTM=0.259 ipTM=0.177 tol=1.6
2024-07-26 19:27:26,047 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=43.9 pTM=0.256 ipTM=0.173 tol=1.59
2024-07-26 19:27:33,151 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=43.9 pTM=0.257 ipTM=0.171 tol=1.94
2024-07-26 19:27:40,248 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=43.9 pTM=0.256 ipTM=0.175 tol=1.77
2024-07-26 19:27:47,345 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=43.6 pTM=0.259 ipTM=0.162 tol=1.54
2024-07-26 19:27:54,440 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=43.6 pTM=0.261 ipTM=0.163 tol=2.03
2024-07-26 19:28:01,538 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=44.1 pTM=0.26 ipTM=0.176 tol=1.52
2024-07-26 19:28:01,539 alphafold2_multimer_v3_model_4_seed_000 took 220.0s (30 recycles)
2024-07-26 19:28:08,888 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=44 pTM=0.256 ipTM=0.139
2024-07-26 19:28:16,013 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=44.5 pTM=0.256 ipTM=0.168 tol=15.2
2024-07-26 19:28:23,133 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=44.8 pTM=0.256 ipTM=0.176 tol=10.9
2024-07-26 19:28:30,253 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=44.7 pTM=0.256 ipTM=0.171 tol=8.22
2024-07-26 19:28:37,373 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=44.5 pTM=0.255 ipTM=0.167 tol=6.09
2024-07-26 19:28:44,488 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=44.6 pTM=0.256 ipTM=0.174 tol=4.97
2024-07-26 19:28:51,606 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=44.3 pTM=0.256 ipTM=0.167 tol=7.09
2024-07-26 19:28:58,718 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=44.5 pTM=0.255 ipTM=0.171 tol=7.52
2024-07-26 19:29:05,827 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=44.1 pTM=0.255 ipTM=0.164 tol=4.62
2024-07-26 19:29:12,948 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=44.2 pTM=0.256 ipTM=0.161 tol=3.58
2024-07-26 19:29:20,058 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=44.1 pTM=0.255 ipTM=0.161 tol=4.16
2024-07-26 19:29:27,171 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=44.1 pTM=0.257 ipTM=0.163 tol=4.93
2024-07-26 19:29:34,288 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=43.6 pTM=0.257 ipTM=0.158 tol=4.15
2024-07-26 19:29:41,407 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=44.1 pTM=0.257 ipTM=0.166 tol=4.97
2024-07-26 19:29:48,522 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=44 pTM=0.256 ipTM=0.161 tol=3.53
2024-07-26 19:29:55,634 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=44 pTM=0.256 ipTM=0.163 tol=3.55
2024-07-26 19:30:02,751 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=43.9 pTM=0.255 ipTM=0.158 tol=2.39
2024-07-26 19:30:09,862 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=43.8 pTM=0.256 ipTM=0.16 tol=1.8
2024-07-26 19:30:16,978 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=43.9 pTM=0.255 ipTM=0.157 tol=1.51
2024-07-26 19:30:24,092 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=44 pTM=0.257 ipTM=0.163 tol=5.23
2024-07-26 19:30:31,204 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=44.4 pTM=0.256 ipTM=0.167 tol=5.38
2024-07-26 19:30:38,318 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=43.9 pTM=0.257 ipTM=0.158 tol=5.14
2024-07-26 19:30:45,428 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=44.2 pTM=0.257 ipTM=0.165 tol=5.25
2024-07-26 19:30:52,542 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=44.6 pTM=0.258 ipTM=0.171 tol=7.14
2024-07-26 19:30:59,653 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=45.1 pTM=0.258 ipTM=0.195 tol=3.33
2024-07-26 19:31:06,763 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=44.8 pTM=0.255 ipTM=0.179 tol=2.81
2024-07-26 19:31:13,875 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=44.9 pTM=0.254 ipTM=0.185 tol=3.22
2024-07-26 19:31:20,987 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=44.7 pTM=0.254 ipTM=0.183 tol=1.71
2024-07-26 19:31:28,102 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=44.8 pTM=0.255 ipTM=0.191 tol=2.39
2024-07-26 19:31:35,213 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=44.5 pTM=0.255 ipTM=0.18 tol=4.59
2024-07-26 19:31:42,323 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=44.6 pTM=0.253 ipTM=0.188 tol=2.82
2024-07-26 19:31:42,324 alphafold2_multimer_v3_model_5_seed_000 took 220.6s (30 recycles)
2024-07-26 19:31:42,545 reranking models by 'multimer' metric
2024-07-26 19:31:45,410 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-26 19:32:18,044 Relaxation took 35.5s
2024-07-26 19:32:18,044 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=47.5 pTM=0.297 ipTM=0.263
2024-07-26 19:32:52,378 Relaxation took 34.3s
2024-07-26 19:32:52,379 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=46.5 pTM=0.276 ipTM=0.229
2024-07-26 19:33:24,825 Relaxation took 32.4s
2024-07-26 19:33:24,825 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=44.6 pTM=0.253 ipTM=0.188
2024-07-26 19:34:07,283 Relaxation took 42.5s
2024-07-26 19:34:07,283 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=44.1 pTM=0.26 ipTM=0.176
2024-07-26 19:34:48,624 Relaxation took 41.3s
2024-07-26 19:34:48,624 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=42.8 pTM=0.258 ipTM=0.141
2024-07-26 19:34:49,729 Done