2024-07-26 19:13:41,081 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-26 19:13:41,423 Running on GPU
2024-07-26 19:13:45,708 Found 6 citations for tools or databases
2024-07-26 19:13:45,709 Query 1/1: HOXC9_KCTD5 (length 494)
2024-07-26 19:13:50,548 Setting max_seq=508, max_extra_seq=2048
2024-07-26 19:16:26,200 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=49.2 pTM=0.285 ipTM=0.122
2024-07-26 19:16:31,643 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=50.2 pTM=0.288 ipTM=0.129 tol=10.4
2024-07-26 19:16:37,089 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=50.4 pTM=0.288 ipTM=0.12 tol=8.66
2024-07-26 19:16:42,539 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=49.6 pTM=0.283 ipTM=0.113 tol=5.34
2024-07-26 19:16:47,982 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=49.6 pTM=0.285 ipTM=0.116 tol=2.68
2024-07-26 19:16:53,424 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=49.3 pTM=0.285 ipTM=0.112 tol=1.79
2024-07-26 19:16:58,869 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=49.3 pTM=0.284 ipTM=0.112 tol=3
2024-07-26 19:17:04,310 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=49.1 pTM=0.286 ipTM=0.114 tol=2.78
2024-07-26 19:17:09,757 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=49.4 pTM=0.284 ipTM=0.112 tol=3.79
2024-07-26 19:17:15,204 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=49.7 pTM=0.286 ipTM=0.117 tol=3.29
2024-07-26 19:17:20,655 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=49.2 pTM=0.283 ipTM=0.112 tol=2.95
2024-07-26 19:17:26,102 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=49.7 pTM=0.286 ipTM=0.12 tol=2.38
2024-07-26 19:17:31,549 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=49.4 pTM=0.285 ipTM=0.114 tol=3.22
2024-07-26 19:17:36,998 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=49.3 pTM=0.287 ipTM=0.115 tol=2.8
2024-07-26 19:17:42,446 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=49.6 pTM=0.286 ipTM=0.118 tol=1.67
2024-07-26 19:17:47,898 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=49.6 pTM=0.288 ipTM=0.122 tol=2.41
2024-07-26 19:17:53,350 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=49.5 pTM=0.288 ipTM=0.121 tol=2.72
2024-07-26 19:17:58,803 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=49.4 pTM=0.286 ipTM=0.117 tol=2.41
2024-07-26 19:18:04,251 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=49.2 pTM=0.288 ipTM=0.121 tol=2.81
2024-07-26 19:18:09,700 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=49.2 pTM=0.288 ipTM=0.12 tol=3.07
2024-07-26 19:18:15,147 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=49.1 pTM=0.288 ipTM=0.118 tol=2.78
2024-07-26 19:18:20,598 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=49.2 pTM=0.289 ipTM=0.118 tol=3.17
2024-07-26 19:18:26,051 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=49.2 pTM=0.288 ipTM=0.113 tol=4.38
2024-07-26 19:18:31,511 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=49.1 pTM=0.286 ipTM=0.114 tol=4.38
2024-07-26 19:18:36,965 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=49.3 pTM=0.287 ipTM=0.117 tol=2.62
2024-07-26 19:18:42,417 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=49.3 pTM=0.288 ipTM=0.118 tol=2.79
2024-07-26 19:18:47,869 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=49.5 pTM=0.289 ipTM=0.12 tol=2.61
2024-07-26 19:18:53,322 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=49.5 pTM=0.29 ipTM=0.12 tol=1.85
2024-07-26 19:18:58,779 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=49.4 pTM=0.288 ipTM=0.118 tol=3.68
2024-07-26 19:19:04,245 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=49.6 pTM=0.292 ipTM=0.125 tol=4.03
2024-07-26 19:19:09,696 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=49.6 pTM=0.292 ipTM=0.124 tol=3.36
2024-07-26 19:19:09,697 alphafold2_multimer_v3_model_1_seed_000 took 312.4s (30 recycles)
2024-07-26 19:19:15,336 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=49.6 pTM=0.292 ipTM=0.136
2024-07-26 19:19:20,797 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=50.4 pTM=0.292 ipTM=0.135 tol=11.3
2024-07-26 19:19:26,253 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=50.1 pTM=0.283 ipTM=0.118 tol=8.84
2024-07-26 19:19:31,716 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=50.3 pTM=0.283 ipTM=0.115 tol=8.83
2024-07-26 19:19:37,184 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=50.5 pTM=0.285 ipTM=0.116 tol=5.87
2024-07-26 19:19:42,649 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=50.1 pTM=0.283 ipTM=0.111 tol=5.25
2024-07-26 19:19:48,117 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=50.5 pTM=0.283 ipTM=0.111 tol=4.64
2024-07-26 19:19:53,586 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=50.5 pTM=0.284 ipTM=0.112 tol=4.96
2024-07-26 19:19:59,047 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=50.5 pTM=0.284 ipTM=0.116 tol=5.6
2024-07-26 19:20:04,510 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=50.4 pTM=0.283 ipTM=0.11 tol=5.05
2024-07-26 19:20:09,979 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=50.3 pTM=0.282 ipTM=0.109 tol=3.52
2024-07-26 19:20:15,450 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=50.5 pTM=0.283 ipTM=0.109 tol=2.5
2024-07-26 19:20:20,920 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=50.2 pTM=0.283 ipTM=0.108 tol=3.35
2024-07-26 19:20:26,384 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=50.3 pTM=0.283 ipTM=0.108 tol=4.57
2024-07-26 19:20:31,860 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=50.8 pTM=0.283 ipTM=0.11 tol=3.55
2024-07-26 19:20:37,327 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=50.3 pTM=0.283 ipTM=0.109 tol=3.89
2024-07-26 19:20:42,801 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=50.8 pTM=0.284 ipTM=0.108 tol=2.76
2024-07-26 19:20:48,273 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=50.4 pTM=0.283 ipTM=0.107 tol=2.61
2024-07-26 19:20:53,739 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=50.6 pTM=0.283 ipTM=0.107 tol=3.05
2024-07-26 19:20:59,215 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=50.6 pTM=0.282 ipTM=0.103 tol=2.12
2024-07-26 19:21:04,693 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=50.5 pTM=0.282 ipTM=0.103 tol=1.54
2024-07-26 19:21:10,166 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=50.8 pTM=0.284 ipTM=0.104 tol=1.75
2024-07-26 19:21:15,639 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=50.8 pTM=0.283 ipTM=0.103 tol=1.74
2024-07-26 19:21:21,112 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=50.6 pTM=0.283 ipTM=0.104 tol=2.15
2024-07-26 19:21:26,583 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=50.6 pTM=0.283 ipTM=0.105 tol=1.6
2024-07-26 19:21:32,053 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=50.7 pTM=0.283 ipTM=0.106 tol=2.05
2024-07-26 19:21:37,518 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=50.8 pTM=0.283 ipTM=0.107 tol=3.56
2024-07-26 19:21:42,979 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=50.5 pTM=0.282 ipTM=0.103 tol=4.96
2024-07-26 19:21:48,453 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=50.6 pTM=0.282 ipTM=0.104 tol=4.42
2024-07-26 19:21:53,917 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=50.7 pTM=0.283 ipTM=0.105 tol=4.1
2024-07-26 19:21:59,392 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=50.4 pTM=0.282 ipTM=0.106 tol=5.17
2024-07-26 19:21:59,392 alphafold2_multimer_v3_model_2_seed_000 took 169.5s (30 recycles)
2024-07-26 19:22:05,054 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=47.2 pTM=0.282 ipTM=0.103
2024-07-26 19:22:10,538 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=50.7 pTM=0.29 ipTM=0.122 tol=11.2
2024-07-26 19:22:16,019 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=52 pTM=0.291 ipTM=0.161 tol=5.85
2024-07-26 19:22:21,497 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=51.5 pTM=0.29 ipTM=0.156 tol=4.32
2024-07-26 19:22:26,978 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=52 pTM=0.291 ipTM=0.181 tol=2.63
2024-07-26 19:22:32,454 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=51.8 pTM=0.292 ipTM=0.18 tol=1.81
2024-07-26 19:22:37,933 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=52.3 pTM=0.295 ipTM=0.198 tol=1.53
2024-07-26 19:22:43,402 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=52.9 pTM=0.301 ipTM=0.223 tol=4.14
2024-07-26 19:22:48,882 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=53.4 pTM=0.306 ipTM=0.238 tol=3.79
2024-07-26 19:22:54,359 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=53.5 pTM=0.308 ipTM=0.245 tol=3.64
2024-07-26 19:22:59,836 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=53.8 pTM=0.312 ipTM=0.255 tol=2.86
2024-07-26 19:23:05,306 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=53.8 pTM=0.308 ipTM=0.242 tol=2.02
2024-07-26 19:23:10,780 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=53.8 pTM=0.31 ipTM=0.253 tol=2.02
2024-07-26 19:23:16,259 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=53.9 pTM=0.311 ipTM=0.261 tol=1.29
2024-07-26 19:23:21,736 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=54.1 pTM=0.315 ipTM=0.261 tol=2
2024-07-26 19:23:27,206 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=54.2 pTM=0.314 ipTM=0.267 tol=1.96
2024-07-26 19:23:32,678 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=54.4 pTM=0.316 ipTM=0.264 tol=1.11
2024-07-26 19:23:38,154 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=54.1 pTM=0.312 ipTM=0.259 tol=1.15
2024-07-26 19:23:43,632 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=54.2 pTM=0.314 ipTM=0.269 tol=2.4
2024-07-26 19:23:49,112 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=54.2 pTM=0.313 ipTM=0.261 tol=2.04
2024-07-26 19:23:54,590 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=54.1 pTM=0.317 ipTM=0.274 tol=4.34
2024-07-26 19:24:00,070 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=54.3 pTM=0.315 ipTM=0.272 tol=3.99
2024-07-26 19:24:05,550 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=54.2 pTM=0.315 ipTM=0.267 tol=1.57
2024-07-26 19:24:11,024 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=54.3 pTM=0.317 ipTM=0.283 tol=3.81
2024-07-26 19:24:16,500 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=54.5 pTM=0.318 ipTM=0.286 tol=2.12
2024-07-26 19:24:21,972 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=54.7 pTM=0.32 ipTM=0.293 tol=3.52
2024-07-26 19:24:27,440 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=54.6 pTM=0.318 ipTM=0.28 tol=1.55
2024-07-26 19:24:32,911 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=54.3 pTM=0.319 ipTM=0.275 tol=0.872
2024-07-26 19:24:38,385 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=54 pTM=0.313 ipTM=0.267 tol=2.25
2024-07-26 19:24:43,860 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=54.5 pTM=0.32 ipTM=0.279 tol=2.62
2024-07-26 19:24:49,333 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=54.1 pTM=0.314 ipTM=0.27 tol=1.3
2024-07-26 19:24:49,334 alphafold2_multimer_v3_model_3_seed_000 took 169.8s (30 recycles)
2024-07-26 19:24:55,001 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=47.6 pTM=0.275 ipTM=0.0967
2024-07-26 19:25:00,491 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=47.3 pTM=0.278 ipTM=0.106 tol=16.2
2024-07-26 19:25:05,978 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=48.8 pTM=0.275 ipTM=0.108 tol=11.1
2024-07-26 19:25:11,461 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=48.1 pTM=0.275 ipTM=0.0995 tol=9.3
2024-07-26 19:25:16,943 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=48.3 pTM=0.276 ipTM=0.106 tol=5.62
2024-07-26 19:25:22,428 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=48.2 pTM=0.277 ipTM=0.104 tol=3.83
2024-07-26 19:25:27,916 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=48.2 pTM=0.277 ipTM=0.105 tol=4.02
2024-07-26 19:25:33,404 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=48.3 pTM=0.278 ipTM=0.104 tol=3.24
2024-07-26 19:25:38,890 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=48.5 pTM=0.278 ipTM=0.103 tol=3.17
2024-07-26 19:25:44,368 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=48.8 pTM=0.277 ipTM=0.101 tol=2.78
2024-07-26 19:25:49,844 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=48.5 pTM=0.278 ipTM=0.104 tol=2.18
2024-07-26 19:25:55,314 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=48.4 pTM=0.279 ipTM=0.103 tol=1.57
2024-07-26 19:26:00,789 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=48.4 pTM=0.279 ipTM=0.105 tol=2.01
2024-07-26 19:26:06,269 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=48.8 pTM=0.28 ipTM=0.108 tol=1.84
2024-07-26 19:26:11,745 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=49 pTM=0.278 ipTM=0.106 tol=2.11
2024-07-26 19:26:17,218 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=48.8 pTM=0.279 ipTM=0.111 tol=2.01
2024-07-26 19:26:22,693 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=48.8 pTM=0.281 ipTM=0.11 tol=1.8
2024-07-26 19:26:28,166 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=48.5 pTM=0.281 ipTM=0.112 tol=1.94
2024-07-26 19:26:33,643 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=48.5 pTM=0.28 ipTM=0.114 tol=1.35
2024-07-26 19:26:39,107 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=49.2 pTM=0.28 ipTM=0.114 tol=2.13
2024-07-26 19:26:44,585 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=49.2 pTM=0.281 ipTM=0.109 tol=2.26
2024-07-26 19:26:50,057 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=49.6 pTM=0.281 ipTM=0.119 tol=2.08
2024-07-26 19:26:55,528 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=48.7 pTM=0.282 ipTM=0.115 tol=1.76
2024-07-26 19:27:00,997 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=48.6 pTM=0.283 ipTM=0.115 tol=1.92
2024-07-26 19:27:06,470 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=49 pTM=0.282 ipTM=0.114 tol=1.51
2024-07-26 19:27:11,942 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=49.2 pTM=0.279 ipTM=0.124 tol=2.51
2024-07-26 19:27:17,411 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=49.1 pTM=0.28 ipTM=0.111 tol=1.84
2024-07-26 19:27:22,884 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=49 pTM=0.28 ipTM=0.116 tol=1.67
2024-07-26 19:27:28,365 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=48.8 pTM=0.279 ipTM=0.109 tol=2.6
2024-07-26 19:27:33,837 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=49 pTM=0.28 ipTM=0.113 tol=1.86
2024-07-26 19:27:39,306 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=48.7 pTM=0.28 ipTM=0.114 tol=1.49
2024-07-26 19:27:39,307 alphafold2_multimer_v3_model_4_seed_000 took 169.8s (30 recycles)
2024-07-26 19:27:44,981 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=48 pTM=0.286 ipTM=0.122
2024-07-26 19:27:50,476 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=49.9 pTM=0.278 ipTM=0.126 tol=15.6
2024-07-26 19:27:55,951 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=51 pTM=0.282 ipTM=0.148 tol=6.66
2024-07-26 19:28:01,436 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=50.5 pTM=0.281 ipTM=0.145 tol=5.98
2024-07-26 19:28:06,916 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=51.2 pTM=0.282 ipTM=0.171 tol=3.7
2024-07-26 19:28:12,401 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=51.2 pTM=0.283 ipTM=0.181 tol=3.58
2024-07-26 19:28:17,890 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=51.6 pTM=0.286 ipTM=0.196 tol=5.18
2024-07-26 19:28:23,376 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=52.3 pTM=0.291 ipTM=0.225 tol=4.26
2024-07-26 19:28:28,863 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=53 pTM=0.295 ipTM=0.242 tol=3.53
2024-07-26 19:28:34,345 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=53.3 pTM=0.298 ipTM=0.261 tol=2.95
2024-07-26 19:28:39,829 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=53.3 pTM=0.3 ipTM=0.269 tol=5.1
2024-07-26 19:28:45,316 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=53.3 pTM=0.299 ipTM=0.271 tol=3.53
2024-07-26 19:28:50,804 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=53.2 pTM=0.302 ipTM=0.278 tol=4.53
2024-07-26 19:28:56,288 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=54 pTM=0.312 ipTM=0.296 tol=3.82
2024-07-26 19:29:01,772 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=53.9 pTM=0.31 ipTM=0.294 tol=3.88
2024-07-26 19:29:07,258 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=53.7 pTM=0.312 ipTM=0.298 tol=4.59
2024-07-26 19:29:12,742 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=53.7 pTM=0.313 ipTM=0.299 tol=2.7
2024-07-26 19:29:18,223 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=53.6 pTM=0.31 ipTM=0.293 tol=4.32
2024-07-26 19:29:23,707 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=53.6 pTM=0.31 ipTM=0.294 tol=4.05
2024-07-26 19:29:29,190 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=53.5 pTM=0.31 ipTM=0.292 tol=1.65
2024-07-26 19:29:34,671 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=53.9 pTM=0.316 ipTM=0.305 tol=1.96
2024-07-26 19:29:40,145 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=54 pTM=0.319 ipTM=0.31 tol=1.57
2024-07-26 19:29:45,618 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=53.6 pTM=0.311 ipTM=0.296 tol=4.21
2024-07-26 19:29:51,092 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=53.8 pTM=0.314 ipTM=0.302 tol=4.56
2024-07-26 19:29:56,572 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=53.9 pTM=0.314 ipTM=0.302 tol=2.09
2024-07-26 19:30:02,047 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=53.9 pTM=0.317 ipTM=0.307 tol=1.7
2024-07-26 19:30:07,527 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=53.8 pTM=0.315 ipTM=0.304 tol=1.37
2024-07-26 19:30:13,009 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=53.8 pTM=0.315 ipTM=0.302 tol=1.17
2024-07-26 19:30:18,489 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=53.9 pTM=0.316 ipTM=0.303 tol=1.87
2024-07-26 19:30:23,965 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=54 pTM=0.32 ipTM=0.312 tol=2.05
2024-07-26 19:30:29,437 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=53.8 pTM=0.316 ipTM=0.305 tol=1.77
2024-07-26 19:30:29,437 alphafold2_multimer_v3_model_5_seed_000 took 170.0s (30 recycles)
2024-07-26 19:30:29,608 reranking models by 'multimer' metric
2024-07-26 19:30:32,634 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-26 19:30:53,787 Relaxation took 24.2s
2024-07-26 19:30:53,787 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=53.8 pTM=0.316 ipTM=0.305
2024-07-26 19:31:11,916 Relaxation took 18.1s
2024-07-26 19:31:11,916 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=54.1 pTM=0.314 ipTM=0.27
2024-07-26 19:31:36,159 Relaxation took 24.2s
2024-07-26 19:31:36,159 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=49.6 pTM=0.292 ipTM=0.124
2024-07-26 19:32:08,189 Relaxation took 32.0s
2024-07-26 19:32:08,189 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=48.7 pTM=0.28 ipTM=0.114
2024-07-26 19:32:30,487 Relaxation took 22.3s
2024-07-26 19:32:30,487 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=50.4 pTM=0.282 ipTM=0.106
2024-07-26 19:32:31,683 Done