2024-07-26 19:30:36,226 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-26 19:30:36,578 Running on GPU 2024-07-26 19:30:40,625 Found 6 citations for tools or databases 2024-07-26 19:30:40,625 Query 1/1: HTR3A_FBXO16 (length 770) 2024-07-26 19:30:41,286 Sleeping for 8s. Reason: PENDING 2024-07-26 19:30:49,700 Sleeping for 7s. Reason: RUNNING 2024-07-26 19:30:57,129 Sleeping for 6s. Reason: RUNNING 2024-07-26 19:31:03,557 Sleeping for 5s. Reason: RUNNING 2024-07-26 19:31:08,973 Sleeping for 9s. Reason: RUNNING 2024-07-26 19:31:18,387 Sleeping for 6s. Reason: RUNNING 2024-07-26 19:31:24,811 Sleeping for 9s. Reason: RUNNING 2024-07-26 19:31:34,232 Sleeping for 10s. Reason: RUNNING 2024-07-26 19:31:46,527 Sleeping for 8s. Reason: PENDING 2024-07-26 19:31:54,937 Sleeping for 10s. Reason: RUNNING 2024-07-26 19:32:05,385 Sleeping for 9s. Reason: RUNNING 2024-07-26 19:32:14,804 Sleeping for 6s. Reason: RUNNING 2024-07-26 19:32:21,237 Sleeping for 8s. Reason: RUNNING 2024-07-26 19:32:29,657 Sleeping for 6s. Reason: RUNNING 2024-07-26 19:32:39,154 Setting max_seq=508, max_extra_seq=2048 2024-07-26 19:36:19,935 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=64.4 pTM=0.469 ipTM=0.134 2024-07-26 19:36:35,772 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=65.9 pTM=0.487 ipTM=0.143 tol=19.1 2024-07-26 19:36:51,596 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=66.2 pTM=0.494 ipTM=0.157 tol=5.37 2024-07-26 19:37:07,448 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=66 pTM=0.492 ipTM=0.142 tol=3.18 2024-07-26 19:37:23,300 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=66.2 pTM=0.493 ipTM=0.146 tol=2.18 2024-07-26 19:37:39,158 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=66.4 pTM=0.495 ipTM=0.146 tol=1.88 2024-07-26 19:37:55,013 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=66.3 pTM=0.495 ipTM=0.145 tol=1.87 2024-07-26 19:38:10,902 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=66.2 pTM=0.491 ipTM=0.139 tol=2.34 2024-07-26 19:38:26,772 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=66.2 pTM=0.489 ipTM=0.137 tol=2.71 2024-07-26 19:38:42,660 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=66.2 pTM=0.487 ipTM=0.13 tol=1.36 2024-07-26 19:38:58,545 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=66.1 pTM=0.488 ipTM=0.129 tol=3.02 2024-07-26 19:39:14,436 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=66.4 pTM=0.49 ipTM=0.135 tol=2.1 2024-07-26 19:39:30,326 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=66.6 pTM=0.494 ipTM=0.139 tol=1.72 2024-07-26 19:39:46,222 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=66.6 pTM=0.491 ipTM=0.137 tol=1.82 2024-07-26 19:40:02,115 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=66.3 pTM=0.487 ipTM=0.132 tol=1.12 2024-07-26 19:40:18,002 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=66.7 pTM=0.49 ipTM=0.131 tol=2.79 2024-07-26 19:40:33,898 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=66.5 pTM=0.491 ipTM=0.133 tol=3 2024-07-26 19:40:49,784 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=66.2 pTM=0.489 ipTM=0.13 tol=2.27 2024-07-26 19:41:05,673 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=66.2 pTM=0.488 ipTM=0.128 tol=2.5 2024-07-26 19:41:21,578 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=66.4 pTM=0.487 ipTM=0.124 tol=2.07 2024-07-26 19:41:37,483 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=66.2 pTM=0.486 ipTM=0.125 tol=3.04 2024-07-26 19:41:53,377 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=66.8 pTM=0.49 ipTM=0.124 tol=1.33 2024-07-26 19:42:09,268 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=66.4 pTM=0.488 ipTM=0.127 tol=1.7 2024-07-26 19:42:25,161 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=66.6 pTM=0.491 ipTM=0.13 tol=3.01 2024-07-26 19:42:41,053 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=66.4 pTM=0.49 ipTM=0.135 tol=3.78 2024-07-26 19:42:56,940 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=66.4 pTM=0.491 ipTM=0.141 tol=2.89 2024-07-26 19:43:12,824 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=66.6 pTM=0.493 ipTM=0.139 tol=3.04 2024-07-26 19:43:28,706 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=66.4 pTM=0.49 ipTM=0.139 tol=1.85 2024-07-26 19:43:44,590 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=66.4 pTM=0.49 ipTM=0.136 tol=2.17 2024-07-26 19:44:00,486 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=66.2 pTM=0.487 ipTM=0.129 tol=2.09 2024-07-26 19:44:16,383 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=66.3 pTM=0.487 ipTM=0.126 tol=2.59 2024-07-26 19:44:16,384 alphafold2_multimer_v3_model_1_seed_000 took 689.5s (30 recycles) 2024-07-26 19:44:32,812 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=64.1 pTM=0.473 ipTM=0.111 2024-07-26 19:44:48,768 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=63.9 pTM=0.473 ipTM=0.136 tol=34.8 2024-07-26 19:45:04,677 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=64.6 pTM=0.489 ipTM=0.195 tol=8.73 2024-07-26 19:45:20,585 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=64.6 pTM=0.495 ipTM=0.196 tol=5.17 2024-07-26 19:45:36,485 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=64.8 pTM=0.496 ipTM=0.202 tol=3.31 2024-07-26 19:45:52,393 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=65.1 pTM=0.5 ipTM=0.212 tol=1.21 2024-07-26 19:46:08,292 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=65.2 pTM=0.501 ipTM=0.203 tol=1.75 2024-07-26 19:46:24,197 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=65.1 pTM=0.499 ipTM=0.202 tol=1.28 2024-07-26 19:46:40,090 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=65.1 pTM=0.498 ipTM=0.2 tol=2.42 2024-07-26 19:46:55,993 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=64.9 pTM=0.496 ipTM=0.198 tol=2.91 2024-07-26 19:47:11,885 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=64.9 pTM=0.498 ipTM=0.2 tol=2.91 2024-07-26 19:47:27,785 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=65.2 pTM=0.5 ipTM=0.21 tol=1.71 2024-07-26 19:47:43,679 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=65.1 pTM=0.5 ipTM=0.213 tol=1.18 2024-07-26 19:47:59,578 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=65.2 pTM=0.5 ipTM=0.206 tol=0.842 2024-07-26 19:48:15,461 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=65 pTM=0.498 ipTM=0.206 tol=1.27 2024-07-26 19:48:31,370 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=65.1 pTM=0.5 ipTM=0.208 tol=1.27 2024-07-26 19:48:47,265 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=64.9 pTM=0.5 ipTM=0.205 tol=1.25 2024-07-26 19:49:03,166 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=64.9 pTM=0.5 ipTM=0.202 tol=0.947 2024-07-26 19:49:19,060 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=65.1 pTM=0.498 ipTM=0.202 tol=2.26 2024-07-26 19:49:34,962 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=64.9 pTM=0.498 ipTM=0.198 tol=2.03 2024-07-26 19:49:50,864 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=64.9 pTM=0.498 ipTM=0.199 tol=1.28 2024-07-26 19:50:06,764 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=65 pTM=0.499 ipTM=0.196 tol=2.83 2024-07-26 19:50:22,672 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=64.9 pTM=0.499 ipTM=0.197 tol=1.3 2024-07-26 19:50:38,575 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=65.2 pTM=0.5 ipTM=0.199 tol=3.13 2024-07-26 19:50:54,467 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=65 pTM=0.499 ipTM=0.202 tol=1.98 2024-07-26 19:51:10,364 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=65.1 pTM=0.502 ipTM=0.211 tol=1.58 2024-07-26 19:51:26,272 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=65.4 pTM=0.5 ipTM=0.21 tol=1.98 2024-07-26 19:51:42,175 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=65.2 pTM=0.502 ipTM=0.206 tol=2.46 2024-07-26 19:51:58,076 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=65.2 pTM=0.5 ipTM=0.205 tol=1.91 2024-07-26 19:52:13,993 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=65.1 pTM=0.499 ipTM=0.196 tol=1.64 2024-07-26 19:52:29,907 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=64.9 pTM=0.498 ipTM=0.197 tol=2.21 2024-07-26 19:52:29,907 alphafold2_multimer_v3_model_2_seed_000 took 493.0s (30 recycles) 2024-07-26 19:52:46,310 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=62.1 pTM=0.455 ipTM=0.128 2024-07-26 19:53:02,254 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=64 pTM=0.482 ipTM=0.15 tol=19.7 2024-07-26 19:53:18,174 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=64.9 pTM=0.491 ipTM=0.181 tol=6.93 2024-07-26 19:53:34,084 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=65.2 pTM=0.496 ipTM=0.187 tol=5.62 2024-07-26 19:53:50,006 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=65.3 pTM=0.501 ipTM=0.195 tol=6.11 2024-07-26 19:54:05,921 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=65.6 pTM=0.503 ipTM=0.203 tol=6.14 2024-07-26 19:54:21,826 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=65.5 pTM=0.504 ipTM=0.207 tol=2.66 2024-07-26 19:54:37,748 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=65.5 pTM=0.504 ipTM=0.201 tol=3.43 2024-07-26 19:54:53,654 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=65.8 pTM=0.508 ipTM=0.204 tol=9.64 2024-07-26 19:55:09,586 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=65.4 pTM=0.504 ipTM=0.195 tol=4.98 2024-07-26 19:55:25,500 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=65.6 pTM=0.505 ipTM=0.201 tol=2.88 2024-07-26 19:55:41,437 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=65.6 pTM=0.504 ipTM=0.206 tol=3.14 2024-07-26 19:55:57,374 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=65.5 pTM=0.506 ipTM=0.207 tol=3.16 2024-07-26 19:56:13,335 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=65.8 pTM=0.507 ipTM=0.21 tol=2.88 2024-07-26 19:56:29,266 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=65.4 pTM=0.504 ipTM=0.209 tol=1.98 2024-07-26 19:56:45,193 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=65.6 pTM=0.506 ipTM=0.209 tol=2.19 2024-07-26 19:57:01,147 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=65.6 pTM=0.506 ipTM=0.209 tol=3.19 2024-07-26 19:57:17,086 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=65.6 pTM=0.506 ipTM=0.202 tol=2.83 2024-07-26 19:57:33,017 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=65.4 pTM=0.503 ipTM=0.2 tol=1.67 2024-07-26 19:57:48,939 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=65.6 pTM=0.505 ipTM=0.197 tol=3.13 2024-07-26 19:58:04,840 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=65.4 pTM=0.504 ipTM=0.194 tol=1.46 2024-07-26 19:58:20,757 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=65.6 pTM=0.505 ipTM=0.198 tol=3.75 2024-07-26 19:58:36,674 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=65.6 pTM=0.505 ipTM=0.203 tol=3.2 2024-07-26 19:58:52,592 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=65.8 pTM=0.507 ipTM=0.203 tol=3.12 2024-07-26 19:59:08,492 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=65.6 pTM=0.506 ipTM=0.204 tol=1.88 2024-07-26 19:59:24,401 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=65.7 pTM=0.507 ipTM=0.211 tol=1.86 2024-07-26 19:59:40,307 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=65.6 pTM=0.506 ipTM=0.206 tol=2.19 2024-07-26 19:59:56,217 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=65.8 pTM=0.508 ipTM=0.2 tol=2.72 2024-07-26 20:00:12,132 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=65.7 pTM=0.506 ipTM=0.203 tol=3.29 2024-07-26 20:00:28,047 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=65.3 pTM=0.504 ipTM=0.197 tol=1.67 2024-07-26 20:00:43,983 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=65.4 pTM=0.505 ipTM=0.2 tol=2.27 2024-07-26 20:00:43,984 alphafold2_multimer_v3_model_3_seed_000 took 493.6s (30 recycles) 2024-07-26 20:01:00,415 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=61.6 pTM=0.459 ipTM=0.105 2024-07-26 20:01:16,327 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=62.5 pTM=0.479 ipTM=0.157 tol=23.7 2024-07-26 20:01:32,222 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=63.6 pTM=0.494 ipTM=0.159 tol=9.05 2024-07-26 20:01:48,138 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=63.8 pTM=0.494 ipTM=0.167 tol=4.39 2024-07-26 20:02:04,054 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=64 pTM=0.494 ipTM=0.17 tol=2.52 2024-07-26 20:02:19,946 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=64.2 pTM=0.495 ipTM=0.167 tol=2.58 2024-07-26 20:02:35,834 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=64.1 pTM=0.498 ipTM=0.17 tol=1.31 2024-07-26 20:02:51,724 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=64 pTM=0.493 ipTM=0.161 tol=1.69 2024-07-26 20:03:07,606 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=64 pTM=0.492 ipTM=0.159 tol=1.93 2024-07-26 20:03:23,494 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=64 pTM=0.493 ipTM=0.161 tol=3.38 2024-07-26 20:03:39,373 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=64.1 pTM=0.494 ipTM=0.163 tol=2.08 2024-07-26 20:03:55,263 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=64.2 pTM=0.493 ipTM=0.165 tol=3.17 2024-07-26 20:04:11,146 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=64.1 pTM=0.492 ipTM=0.166 tol=1.65 2024-07-26 20:04:27,027 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=64.1 pTM=0.494 ipTM=0.164 tol=1.39 2024-07-26 20:04:42,911 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=63.8 pTM=0.49 ipTM=0.161 tol=2.75 2024-07-26 20:04:58,793 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=64.1 pTM=0.494 ipTM=0.161 tol=1.78 2024-07-26 20:05:14,680 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=63.9 pTM=0.494 ipTM=0.165 tol=2.78 2024-07-26 20:05:30,573 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=63.7 pTM=0.49 ipTM=0.159 tol=3.32 2024-07-26 20:05:46,457 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=63.8 pTM=0.49 ipTM=0.16 tol=3.29 2024-07-26 20:06:02,354 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=63.8 pTM=0.492 ipTM=0.157 tol=1.89 2024-07-26 20:06:18,251 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=64 pTM=0.492 ipTM=0.153 tol=2.19 2024-07-26 20:06:34,152 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=64 pTM=0.491 ipTM=0.16 tol=3.56 2024-07-26 20:06:50,045 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=64 pTM=0.494 ipTM=0.161 tol=3.24 2024-07-26 20:07:05,929 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=64.1 pTM=0.496 ipTM=0.165 tol=2.01 2024-07-26 20:07:21,804 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=64 pTM=0.496 ipTM=0.165 tol=2.43 2024-07-26 20:07:37,684 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=64.2 pTM=0.497 ipTM=0.171 tol=2.24 2024-07-26 20:07:53,565 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=64.3 pTM=0.497 ipTM=0.17 tol=2.34 2024-07-26 20:08:09,454 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=64.3 pTM=0.499 ipTM=0.171 tol=1.96 2024-07-26 20:08:25,341 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=64.2 pTM=0.498 ipTM=0.169 tol=2.22 2024-07-26 20:08:41,231 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=64.1 pTM=0.494 ipTM=0.161 tol=2.71 2024-07-26 20:08:57,115 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=64 pTM=0.493 ipTM=0.158 tol=1.91 2024-07-26 20:08:57,115 alphafold2_multimer_v3_model_4_seed_000 took 492.6s (30 recycles) 2024-07-26 20:09:13,557 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=60.6 pTM=0.457 ipTM=0.113 2024-07-26 20:09:29,558 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=62.6 pTM=0.463 ipTM=0.109 tol=27.4 2024-07-26 20:09:45,509 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=63.7 pTM=0.472 ipTM=0.146 tol=16.7 2024-07-26 20:10:01,448 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=64.1 pTM=0.478 ipTM=0.158 tol=6.69 2024-07-26 20:10:17,378 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=64.6 pTM=0.487 ipTM=0.174 tol=4.57 2024-07-26 20:10:33,308 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=64.6 pTM=0.49 ipTM=0.181 tol=2.32 2024-07-26 20:10:49,229 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=64.8 pTM=0.493 ipTM=0.187 tol=1.91 2024-07-26 20:11:05,153 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=64.6 pTM=0.489 ipTM=0.182 tol=1.77 2024-07-26 20:11:21,080 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=64.7 pTM=0.492 ipTM=0.185 tol=1.85 2024-07-26 20:11:37,022 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=64.5 pTM=0.49 ipTM=0.174 tol=4.72 2024-07-26 20:11:52,965 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=64.7 pTM=0.491 ipTM=0.181 tol=4.07 2024-07-26 20:12:08,894 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=64.8 pTM=0.492 ipTM=0.191 tol=1.51 2024-07-26 20:12:24,803 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=64.8 pTM=0.494 ipTM=0.193 tol=4.59 2024-07-26 20:12:40,743 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=64.9 pTM=0.493 ipTM=0.196 tol=3.76 2024-07-26 20:12:56,669 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=64.7 pTM=0.491 ipTM=0.194 tol=3.19 2024-07-26 20:13:12,584 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=65 pTM=0.494 ipTM=0.201 tol=1.85 2024-07-26 20:13:28,488 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=64.9 pTM=0.495 ipTM=0.209 tol=4.19 2024-07-26 20:13:44,396 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=64.6 pTM=0.491 ipTM=0.19 tol=4.28 2024-07-26 20:14:00,295 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=64.6 pTM=0.491 ipTM=0.188 tol=2.28 2024-07-26 20:14:16,201 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=64.9 pTM=0.491 ipTM=0.185 tol=1.54 2024-07-26 20:14:32,099 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=64.8 pTM=0.49 ipTM=0.18 tol=0.937 2024-07-26 20:14:48,004 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=64.7 pTM=0.488 ipTM=0.175 tol=3.66 2024-07-26 20:15:03,904 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=64.7 pTM=0.49 ipTM=0.185 tol=3.56 2024-07-26 20:15:19,805 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=64.9 pTM=0.495 ipTM=0.193 tol=2.4 2024-07-26 20:15:35,704 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=64.9 pTM=0.494 ipTM=0.196 tol=2.66 2024-07-26 20:15:51,602 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=65 pTM=0.496 ipTM=0.208 tol=1.42 2024-07-26 20:16:07,501 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=64.9 pTM=0.498 ipTM=0.209 tol=4.1 2024-07-26 20:16:23,394 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=64.9 pTM=0.499 ipTM=0.214 tol=3.85 2024-07-26 20:16:39,288 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=64.9 pTM=0.498 ipTM=0.211 tol=3.39 2024-07-26 20:16:55,189 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=64.8 pTM=0.494 ipTM=0.195 tol=3 2024-07-26 20:17:11,088 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=64.8 pTM=0.493 ipTM=0.191 tol=4.32 2024-07-26 20:17:11,088 alphafold2_multimer_v3_model_5_seed_000 took 493.5s (30 recycles) 2024-07-26 20:17:11,568 reranking models by 'multimer' metric 2024-07-26 20:17:14,937 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-26 20:18:28,388 Relaxation took 76.8s 2024-07-26 20:18:28,388 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=65.4 pTM=0.505 ipTM=0.2 2024-07-26 20:19:19,162 Relaxation took 50.8s 2024-07-26 20:19:19,162 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=64.9 pTM=0.498 ipTM=0.197 2024-07-26 20:19:43,213 Relaxation took 24.0s 2024-07-26 20:19:43,213 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=64.8 pTM=0.493 ipTM=0.191 2024-07-26 20:20:42,040 Relaxation took 58.8s 2024-07-26 20:20:42,040 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=64 pTM=0.493 ipTM=0.158 2024-07-26 20:21:37,814 Relaxation took 55.8s 2024-07-26 20:21:37,814 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=66.3 pTM=0.487 ipTM=0.126 2024-07-26 20:21:39,505 Done