2024-07-26 20:19:10,833 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-26 20:19:11,163 Running on GPU 2024-07-26 20:19:15,400 Found 6 citations for tools or databases 2024-07-26 20:19:15,400 Query 1/1: ID3_NEURL2 (length 404) 2024-07-26 20:19:15,851 Sleeping for 10s. Reason: PENDING 2024-07-26 20:19:26,267 Sleeping for 5s. Reason: RUNNING 2024-07-26 20:19:31,680 Sleeping for 9s. Reason: RUNNING 2024-07-26 20:19:41,120 Sleeping for 6s. Reason: RUNNING 2024-07-26 20:19:48,897 Sleeping for 7s. Reason: PENDING 2024-07-26 20:19:56,337 Sleeping for 9s. Reason: RUNNING 2024-07-26 20:20:05,761 Sleeping for 10s. Reason: RUNNING 2024-07-26 20:20:17,661 Setting max_seq=508, max_extra_seq=2048 2024-07-26 20:22:53,969 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=61.8 pTM=0.589 ipTM=0.139 2024-07-26 20:22:58,195 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=65.6 pTM=0.651 ipTM=0.196 tol=7.31 2024-07-26 20:23:02,425 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=64.8 pTM=0.638 ipTM=0.21 tol=3.78 2024-07-26 20:23:06,653 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=64.5 pTM=0.635 ipTM=0.216 tol=4 2024-07-26 20:23:10,881 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=65.9 pTM=0.646 ipTM=0.23 tol=1.95 2024-07-26 20:23:15,103 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=65.2 pTM=0.636 ipTM=0.225 tol=1.19 2024-07-26 20:23:19,329 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=65.6 pTM=0.643 ipTM=0.227 tol=1.13 2024-07-26 20:23:23,553 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=66 pTM=0.64 ipTM=0.224 tol=1.86 2024-07-26 20:23:27,776 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=66.2 pTM=0.646 ipTM=0.228 tol=1.3 2024-07-26 20:23:32,002 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=65.7 pTM=0.639 ipTM=0.233 tol=1.14 2024-07-26 20:23:36,229 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=65.5 pTM=0.639 ipTM=0.223 tol=0.81 2024-07-26 20:23:40,455 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=66 pTM=0.643 ipTM=0.226 tol=1 2024-07-26 20:23:44,686 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=66.3 pTM=0.641 ipTM=0.214 tol=1.19 2024-07-26 20:23:48,918 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=65.8 pTM=0.637 ipTM=0.216 tol=1.59 2024-07-26 20:23:53,150 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=66.4 pTM=0.642 ipTM=0.213 tol=0.978 2024-07-26 20:23:57,382 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=66 pTM=0.639 ipTM=0.215 tol=0.799 2024-07-26 20:24:01,621 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=66.2 pTM=0.643 ipTM=0.216 tol=0.918 2024-07-26 20:24:05,853 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=66.8 pTM=0.647 ipTM=0.224 tol=2 2024-07-26 20:24:10,084 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=66.6 pTM=0.644 ipTM=0.214 tol=1.54 2024-07-26 20:24:14,320 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=67.1 pTM=0.648 ipTM=0.227 tol=1.58 2024-07-26 20:24:18,554 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=66.6 pTM=0.65 ipTM=0.223 tol=1.64 2024-07-26 20:24:22,786 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=66.3 pTM=0.642 ipTM=0.221 tol=1.53 2024-07-26 20:24:27,017 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=66.2 pTM=0.64 ipTM=0.207 tol=2.01 2024-07-26 20:24:31,251 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=66.7 pTM=0.646 ipTM=0.217 tol=1.68 2024-07-26 20:24:35,487 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=66.6 pTM=0.65 ipTM=0.214 tol=1.32 2024-07-26 20:24:39,720 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=66.5 pTM=0.645 ipTM=0.229 tol=1.09 2024-07-26 20:24:43,951 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=65.9 pTM=0.642 ipTM=0.211 tol=1.01 2024-07-26 20:24:48,185 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=66.4 pTM=0.643 ipTM=0.211 tol=0.923 2024-07-26 20:24:52,417 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=67 pTM=0.655 ipTM=0.214 tol=1 2024-07-26 20:24:56,648 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=66.7 pTM=0.644 ipTM=0.222 tol=0.936 2024-07-26 20:25:00,883 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=66.6 pTM=0.646 ipTM=0.215 tol=0.767 2024-07-26 20:25:00,883 alphafold2_multimer_v3_model_1_seed_000 took 278.5s (30 recycles) 2024-07-26 20:25:05,228 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=62.2 pTM=0.59 ipTM=0.169 2024-07-26 20:25:09,443 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=62.8 pTM=0.589 ipTM=0.141 tol=6.87 2024-07-26 20:25:13,660 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=63.4 pTM=0.601 ipTM=0.18 tol=6.33 2024-07-26 20:25:17,871 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=63.1 pTM=0.597 ipTM=0.162 tol=1.59 2024-07-26 20:25:22,084 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=63.7 pTM=0.595 ipTM=0.152 tol=1.08 2024-07-26 20:25:26,294 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=63.1 pTM=0.587 ipTM=0.141 tol=2.17 2024-07-26 20:25:30,510 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=64.4 pTM=0.605 ipTM=0.136 tol=2.83 2024-07-26 20:25:34,725 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=66.2 pTM=0.622 ipTM=0.145 tol=5.26 2024-07-26 20:25:38,941 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=65.2 pTM=0.608 ipTM=0.136 tol=1.83 2024-07-26 20:25:43,157 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=63.6 pTM=0.6 ipTM=0.134 tol=2.98 2024-07-26 20:25:47,370 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=63.4 pTM=0.594 ipTM=0.135 tol=4.45 2024-07-26 20:25:51,582 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=64.8 pTM=0.605 ipTM=0.14 tol=1.9 2024-07-26 20:25:55,805 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=64.9 pTM=0.596 ipTM=0.138 tol=2.78 2024-07-26 20:26:00,027 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=64.9 pTM=0.603 ipTM=0.137 tol=2.54 2024-07-26 20:26:04,245 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=64.8 pTM=0.594 ipTM=0.137 tol=2.18 2024-07-26 20:26:08,464 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=65.1 pTM=0.603 ipTM=0.135 tol=2.27 2024-07-26 20:26:12,689 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=67.2 pTM=0.616 ipTM=0.139 tol=4.33 2024-07-26 20:26:16,927 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=65.1 pTM=0.599 ipTM=0.142 tol=5.98 2024-07-26 20:26:21,145 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=65.8 pTM=0.61 ipTM=0.149 tol=1.57 2024-07-26 20:26:25,358 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=65 pTM=0.597 ipTM=0.143 tol=1.98 2024-07-26 20:26:29,575 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=65.2 pTM=0.605 ipTM=0.138 tol=3.19 2024-07-26 20:26:33,807 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=66.5 pTM=0.613 ipTM=0.142 tol=4.22 2024-07-26 20:26:38,022 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=64.6 pTM=0.597 ipTM=0.137 tol=5.08 2024-07-26 20:26:42,239 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=64.9 pTM=0.599 ipTM=0.138 tol=2.51 2024-07-26 20:26:46,460 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=64.8 pTM=0.597 ipTM=0.141 tol=1.05 2024-07-26 20:26:50,675 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=65.6 pTM=0.611 ipTM=0.136 tol=3.02 2024-07-26 20:26:54,892 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=66.1 pTM=0.617 ipTM=0.14 tol=4.51 2024-07-26 20:26:59,112 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=66 pTM=0.613 ipTM=0.145 tol=6.76 2024-07-26 20:27:03,332 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=64.8 pTM=0.601 ipTM=0.15 tol=1.42 2024-07-26 20:27:07,552 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=64.6 pTM=0.597 ipTM=0.143 tol=1.33 2024-07-26 20:27:11,769 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=64.6 pTM=0.597 ipTM=0.146 tol=0.777 2024-07-26 20:27:11,769 alphafold2_multimer_v3_model_2_seed_000 took 130.8s (30 recycles) 2024-07-26 20:27:16,115 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=62.7 pTM=0.608 ipTM=0.172 2024-07-26 20:27:20,344 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=63.7 pTM=0.609 ipTM=0.161 tol=7.39 2024-07-26 20:27:24,570 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=64.9 pTM=0.613 ipTM=0.159 tol=3.46 2024-07-26 20:27:28,792 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=63.7 pTM=0.596 ipTM=0.146 tol=2.99 2024-07-26 20:27:33,013 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=63.4 pTM=0.593 ipTM=0.14 tol=3.11 2024-07-26 20:27:37,236 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=63 pTM=0.591 ipTM=0.144 tol=2.14 2024-07-26 20:27:41,464 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=63.2 pTM=0.591 ipTM=0.143 tol=1.56 2024-07-26 20:27:45,689 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=62.8 pTM=0.591 ipTM=0.15 tol=2.29 2024-07-26 20:27:49,925 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=63.2 pTM=0.589 ipTM=0.143 tol=2.41 2024-07-26 20:27:54,147 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=63 pTM=0.591 ipTM=0.15 tol=3.45 2024-07-26 20:27:58,363 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=63.5 pTM=0.596 ipTM=0.145 tol=4.29 2024-07-26 20:28:02,585 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=64.1 pTM=0.597 ipTM=0.142 tol=2.29 2024-07-26 20:28:06,814 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=63.2 pTM=0.589 ipTM=0.137 tol=6.21 2024-07-26 20:28:11,047 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=62.9 pTM=0.588 ipTM=0.132 tol=1.91 2024-07-26 20:28:15,279 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=63.1 pTM=0.59 ipTM=0.15 tol=2.13 2024-07-26 20:28:19,510 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=63.2 pTM=0.595 ipTM=0.134 tol=3.88 2024-07-26 20:28:23,749 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=63.9 pTM=0.6 ipTM=0.156 tol=4.43 2024-07-26 20:28:27,979 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=63.3 pTM=0.598 ipTM=0.154 tol=2.38 2024-07-26 20:28:32,208 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=63.1 pTM=0.595 ipTM=0.154 tol=2.58 2024-07-26 20:28:36,441 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=63.1 pTM=0.598 ipTM=0.146 tol=2.61 2024-07-26 20:28:40,671 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=63.1 pTM=0.596 ipTM=0.156 tol=2.1 2024-07-26 20:28:44,901 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=62.6 pTM=0.593 ipTM=0.151 tol=1.73 2024-07-26 20:28:49,130 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=62.9 pTM=0.595 ipTM=0.156 tol=2.21 2024-07-26 20:28:53,365 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=62.9 pTM=0.596 ipTM=0.145 tol=2.26 2024-07-26 20:28:57,595 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=62.5 pTM=0.59 ipTM=0.142 tol=3.54 2024-07-26 20:29:01,813 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=62.8 pTM=0.6 ipTM=0.15 tol=5.36 2024-07-26 20:29:06,042 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=63.2 pTM=0.6 ipTM=0.161 tol=5.76 2024-07-26 20:29:10,281 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=63.7 pTM=0.613 ipTM=0.205 tol=3.29 2024-07-26 20:29:14,510 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=63.4 pTM=0.602 ipTM=0.186 tol=2.24 2024-07-26 20:29:18,734 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=63.8 pTM=0.618 ipTM=0.222 tol=1.92 2024-07-26 20:29:22,963 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=63.4 pTM=0.602 ipTM=0.187 tol=2.08 2024-07-26 20:29:22,963 alphafold2_multimer_v3_model_3_seed_000 took 131.1s (30 recycles) 2024-07-26 20:29:27,309 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=62.4 pTM=0.608 ipTM=0.177 2024-07-26 20:29:31,530 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=63.8 pTM=0.614 ipTM=0.165 tol=7.5 2024-07-26 20:29:35,753 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=62.8 pTM=0.593 ipTM=0.15 tol=6.03 2024-07-26 20:29:39,982 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=64 pTM=0.608 ipTM=0.155 tol=5.3 2024-07-26 20:29:44,209 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=63.5 pTM=0.597 ipTM=0.139 tol=3 2024-07-26 20:29:48,433 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=63.2 pTM=0.594 ipTM=0.138 tol=2 2024-07-26 20:29:52,654 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=63 pTM=0.592 ipTM=0.138 tol=1.79 2024-07-26 20:29:56,876 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=63.9 pTM=0.608 ipTM=0.158 tol=4 2024-07-26 20:30:01,101 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=64.8 pTM=0.609 ipTM=0.149 tol=3.21 2024-07-26 20:30:05,328 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=63.7 pTM=0.598 ipTM=0.138 tol=1.84 2024-07-26 20:30:09,551 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=63 pTM=0.593 ipTM=0.137 tol=1.35 2024-07-26 20:30:13,786 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=64.1 pTM=0.6 ipTM=0.147 tol=2.06 2024-07-26 20:30:18,016 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=62.8 pTM=0.589 ipTM=0.134 tol=2.46 2024-07-26 20:30:22,239 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=65.1 pTM=0.616 ipTM=0.17 tol=2.93 2024-07-26 20:30:26,469 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=63.6 pTM=0.597 ipTM=0.144 tol=2 2024-07-26 20:30:30,688 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=65.1 pTM=0.618 ipTM=0.155 tol=2.47 2024-07-26 20:30:34,914 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=64 pTM=0.604 ipTM=0.147 tol=1.8 2024-07-26 20:30:39,132 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=64.2 pTM=0.609 ipTM=0.145 tol=1.89 2024-07-26 20:30:43,356 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=64.4 pTM=0.609 ipTM=0.148 tol=2.07 2024-07-26 20:30:47,584 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=64.6 pTM=0.612 ipTM=0.142 tol=1.56 2024-07-26 20:30:51,810 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=64.4 pTM=0.606 ipTM=0.14 tol=1.18 2024-07-26 20:30:56,031 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=63.8 pTM=0.604 ipTM=0.136 tol=1.49 2024-07-26 20:31:00,266 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=63.2 pTM=0.596 ipTM=0.139 tol=1.42 2024-07-26 20:31:04,483 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=65.2 pTM=0.629 ipTM=0.167 tol=2.54 2024-07-26 20:31:08,716 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=65.2 pTM=0.623 ipTM=0.149 tol=1.93 2024-07-26 20:31:12,937 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=63.8 pTM=0.607 ipTM=0.135 tol=2.5 2024-07-26 20:31:17,165 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=63.5 pTM=0.601 ipTM=0.138 tol=1.12 2024-07-26 20:31:21,397 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=64.1 pTM=0.604 ipTM=0.139 tol=0.984 2024-07-26 20:31:25,627 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=63 pTM=0.596 ipTM=0.138 tol=1.01 2024-07-26 20:31:29,854 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=63.8 pTM=0.601 ipTM=0.14 tol=1.09 2024-07-26 20:31:34,084 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=63.1 pTM=0.589 ipTM=0.134 tol=1.23 2024-07-26 20:31:34,084 alphafold2_multimer_v3_model_4_seed_000 took 131.0s (30 recycles) 2024-07-26 20:31:38,434 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=61.7 pTM=0.592 ipTM=0.139 2024-07-26 20:31:42,665 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=65.6 pTM=0.626 ipTM=0.181 tol=7.81 2024-07-26 20:31:46,900 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=64.7 pTM=0.607 ipTM=0.128 tol=6.01 2024-07-26 20:31:51,139 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=63 pTM=0.587 ipTM=0.117 tol=5.75 2024-07-26 20:31:55,375 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=63.1 pTM=0.592 ipTM=0.134 tol=3.82 2024-07-26 20:31:59,604 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=63.1 pTM=0.591 ipTM=0.144 tol=2.25 2024-07-26 20:32:03,841 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=62.7 pTM=0.59 ipTM=0.147 tol=2.7 2024-07-26 20:32:08,085 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=63.5 pTM=0.587 ipTM=0.136 tol=2.8 2024-07-26 20:32:12,325 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=62.9 pTM=0.588 ipTM=0.14 tol=1.34 2024-07-26 20:32:16,557 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=62.9 pTM=0.584 ipTM=0.127 tol=1.57 2024-07-26 20:32:20,791 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=63 pTM=0.594 ipTM=0.151 tol=2.38 2024-07-26 20:32:25,022 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=63.8 pTM=0.595 ipTM=0.151 tol=2.69 2024-07-26 20:32:29,258 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=63.6 pTM=0.602 ipTM=0.17 tol=1.71 2024-07-26 20:32:33,490 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=63.1 pTM=0.59 ipTM=0.142 tol=1.28 2024-07-26 20:32:37,732 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=63.7 pTM=0.601 ipTM=0.165 tol=1.18 2024-07-26 20:32:41,982 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=63.4 pTM=0.596 ipTM=0.155 tol=0.743 2024-07-26 20:32:46,217 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=64 pTM=0.614 ipTM=0.196 tol=1.67 2024-07-26 20:32:50,446 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=63.8 pTM=0.598 ipTM=0.164 tol=0.924 2024-07-26 20:32:54,687 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=64.3 pTM=0.625 ipTM=0.231 tol=1.1 2024-07-26 20:32:58,932 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=63.6 pTM=0.61 ipTM=0.192 tol=2.33 2024-07-26 20:33:03,183 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=64.1 pTM=0.619 ipTM=0.219 tol=1.36 2024-07-26 20:33:07,414 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=63.1 pTM=0.606 ipTM=0.189 tol=1.71 2024-07-26 20:33:11,652 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=65.8 pTM=0.645 ipTM=0.238 tol=2.26 2024-07-26 20:33:15,904 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=68.2 pTM=0.678 ipTM=0.226 tol=2.59 2024-07-26 20:33:20,142 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=66.5 pTM=0.647 ipTM=0.218 tol=2.17 2024-07-26 20:33:24,384 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=66.1 pTM=0.647 ipTM=0.224 tol=1.59 2024-07-26 20:33:28,632 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=65.9 pTM=0.643 ipTM=0.247 tol=1.93 2024-07-26 20:33:32,883 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=66.2 pTM=0.646 ipTM=0.211 tol=2.21 2024-07-26 20:33:37,126 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=65.8 pTM=0.643 ipTM=0.226 tol=1.17 2024-07-26 20:33:41,373 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=66.6 pTM=0.653 ipTM=0.232 tol=1.37 2024-07-26 20:33:45,634 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=66.4 pTM=0.647 ipTM=0.229 tol=1.1 2024-07-26 20:33:45,635 alphafold2_multimer_v3_model_5_seed_000 took 131.4s (30 recycles) 2024-07-26 20:33:45,752 reranking models by 'multimer' metric 2024-07-26 20:33:48,412 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-26 20:34:04,360 Relaxation took 18.6s 2024-07-26 20:34:04,360 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=66.4 pTM=0.647 ipTM=0.229 2024-07-26 20:34:22,013 Relaxation took 17.7s 2024-07-26 20:34:22,013 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=66.6 pTM=0.646 ipTM=0.215 2024-07-26 20:34:43,832 Relaxation took 21.8s 2024-07-26 20:34:43,832 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=63.4 pTM=0.602 ipTM=0.187 2024-07-26 20:35:06,081 Relaxation took 22.2s 2024-07-26 20:35:06,081 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=64.6 pTM=0.597 ipTM=0.146 2024-07-26 20:35:28,615 Relaxation took 22.5s 2024-07-26 20:35:28,615 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=63.1 pTM=0.589 ipTM=0.134 2024-07-26 20:35:29,575 Done