2024-07-27 00:05:42,993 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-27 00:05:43,319 Running on GPU
2024-07-27 00:05:46,598 Found 6 citations for tools or databases
2024-07-27 00:05:46,598 Query 1/1: MMP10_FBXO6 (length 769)
2024-07-27 00:05:52,338 Setting max_seq=508, max_extra_seq=2048
2024-07-27 00:09:15,845 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=76.8 pTM=0.457 ipTM=0.286
2024-07-27 00:09:27,786 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=79.4 pTM=0.513 ipTM=0.465 tol=8.14
2024-07-27 00:09:39,722 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=79.4 pTM=0.511 ipTM=0.478 tol=3.07
2024-07-27 00:09:51,697 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=79.1 pTM=0.465 ipTM=0.343 tol=1.8
2024-07-27 00:10:03,682 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=79.8 pTM=0.501 ipTM=0.443 tol=0.73
2024-07-27 00:10:15,681 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=80 pTM=0.511 ipTM=0.463 tol=0.898
2024-07-27 00:10:27,679 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=80.2 pTM=0.525 ipTM=0.504 tol=0.798
2024-07-27 00:10:39,694 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=80.2 pTM=0.536 ipTM=0.513 tol=2.57
2024-07-27 00:10:51,723 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=80.2 pTM=0.537 ipTM=0.5 tol=1.1
2024-07-27 00:11:03,782 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=80.4 pTM=0.536 ipTM=0.515 tol=1.65
2024-07-27 00:11:15,837 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=80.1 pTM=0.523 ipTM=0.485 tol=0.738
2024-07-27 00:11:27,895 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=80.1 pTM=0.532 ipTM=0.515 tol=0.586
2024-07-27 00:11:39,952 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=80.2 pTM=0.535 ipTM=0.509 tol=0.697
2024-07-27 00:11:52,007 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=80.1 pTM=0.536 ipTM=0.513 tol=0.805
2024-07-27 00:12:04,068 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=79.9 pTM=0.513 ipTM=0.443 tol=1.31
2024-07-27 00:12:16,127 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=79.9 pTM=0.518 ipTM=0.471 tol=0.747
2024-07-27 00:12:28,203 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=79.7 pTM=0.493 ipTM=0.387 tol=0.683
2024-07-27 00:12:40,283 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=79.6 pTM=0.488 ipTM=0.378 tol=0.637
2024-07-27 00:12:52,351 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=79.3 pTM=0.474 ipTM=0.325 tol=0.738
2024-07-27 00:13:04,412 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=78.9 pTM=0.457 ipTM=0.291 tol=0.487
2024-07-27 00:13:04,412 alphafold2_multimer_v3_model_1_seed_000 took 427.3s (19 recycles)
2024-07-27 00:13:16,868 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=77.4 pTM=0.556 ipTM=0.518
2024-07-27 00:13:28,957 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=79.2 pTM=0.441 ipTM=0.245 tol=5.41
2024-07-27 00:13:41,027 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=81.1 pTM=0.532 ipTM=0.533 tol=2.26
2024-07-27 00:13:53,076 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=80.7 pTM=0.502 ipTM=0.425 tol=1.57
2024-07-27 00:14:05,162 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=80.3 pTM=0.478 ipTM=0.339 tol=0.971
2024-07-27 00:14:17,228 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=81.2 pTM=0.539 ipTM=0.523 tol=0.849
2024-07-27 00:14:29,301 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=80.9 pTM=0.522 ipTM=0.459 tol=1.1
2024-07-27 00:14:41,356 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=80.6 pTM=0.494 ipTM=0.376 tol=1.02
2024-07-27 00:14:53,413 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=81 pTM=0.534 ipTM=0.507 tol=0.737
2024-07-27 00:15:05,450 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=80.6 pTM=0.501 ipTM=0.407 tol=0.57
2024-07-27 00:15:17,520 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=80.2 pTM=0.479 ipTM=0.336 tol=1.13
2024-07-27 00:15:29,590 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=81.1 pTM=0.542 ipTM=0.528 tol=1.22
2024-07-27 00:15:41,655 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=80.8 pTM=0.514 ipTM=0.45 tol=0.591
2024-07-27 00:15:53,708 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=79.9 pTM=0.473 ipTM=0.319 tol=1.03
2024-07-27 00:16:05,776 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=80.6 pTM=0.507 ipTM=0.424 tol=1.03
2024-07-27 00:16:17,844 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=80.9 pTM=0.514 ipTM=0.441 tol=1.04
2024-07-27 00:16:29,897 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=80.6 pTM=0.503 ipTM=0.409 tol=0.576
2024-07-27 00:16:41,949 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=80.8 pTM=0.516 ipTM=0.448 tol=0.332
2024-07-27 00:16:41,950 alphafold2_multimer_v3_model_2_seed_000 took 217.2s (17 recycles)
2024-07-27 00:16:54,417 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=77.9 pTM=0.441 ipTM=0.204
2024-07-27 00:17:06,483 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=78.1 pTM=0.447 ipTM=0.216 tol=4.89
2024-07-27 00:17:18,547 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=78.8 pTM=0.45 ipTM=0.229 tol=4.5
2024-07-27 00:17:30,622 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=78.9 pTM=0.445 ipTM=0.231 tol=2.09
2024-07-27 00:17:42,684 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=79.9 pTM=0.485 ipTM=0.32 tol=1.93
2024-07-27 00:17:54,747 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=79.5 pTM=0.468 ipTM=0.276 tol=0.693
2024-07-27 00:18:06,819 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=79.2 pTM=0.452 ipTM=0.224 tol=1.12
2024-07-27 00:18:18,903 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=78.9 pTM=0.455 ipTM=0.216 tol=0.793
2024-07-27 00:18:30,974 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=79.9 pTM=0.51 ipTM=0.389 tol=1.73
2024-07-27 00:18:43,047 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=79.9 pTM=0.493 ipTM=0.362 tol=0.882
2024-07-27 00:18:55,128 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=79 pTM=0.454 ipTM=0.231 tol=1.31
2024-07-27 00:19:07,181 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=79.1 pTM=0.469 ipTM=0.276 tol=1.55
2024-07-27 00:19:19,237 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=80.1 pTM=0.508 ipTM=0.394 tol=1.95
2024-07-27 00:19:31,311 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=78.7 pTM=0.45 ipTM=0.214 tol=1.62
2024-07-27 00:19:43,369 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=79.1 pTM=0.465 ipTM=0.252 tol=1.73
2024-07-27 00:19:55,422 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=79.9 pTM=0.509 ipTM=0.403 tol=2.43
2024-07-27 00:20:07,467 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=78.4 pTM=0.446 ipTM=0.21 tol=1.41
2024-07-27 00:20:19,540 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=78.4 pTM=0.452 ipTM=0.221 tol=1.1
2024-07-27 00:20:31,612 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=79.8 pTM=0.521 ipTM=0.448 tol=1.89
2024-07-27 00:20:43,669 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=78.6 pTM=0.459 ipTM=0.248 tol=1.37
2024-07-27 00:20:55,730 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=78.4 pTM=0.459 ipTM=0.235 tol=1.1
2024-07-27 00:21:07,805 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=79.6 pTM=0.513 ipTM=0.408 tol=1.45
2024-07-27 00:21:19,862 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=78.8 pTM=0.461 ipTM=0.254 tol=1.17
2024-07-27 00:21:31,915 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=78.5 pTM=0.461 ipTM=0.239 tol=0.915
2024-07-27 00:21:43,975 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=78.9 pTM=0.483 ipTM=0.316 tol=0.776
2024-07-27 00:21:56,038 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=78.6 pTM=0.469 ipTM=0.284 tol=0.602
2024-07-27 00:22:08,106 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=78.8 pTM=0.489 ipTM=0.327 tol=0.659
2024-07-27 00:22:20,157 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=79.3 pTM=0.507 ipTM=0.41 tol=1.31
2024-07-27 00:22:32,215 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=78.6 pTM=0.478 ipTM=0.302 tol=1.13
2024-07-27 00:22:44,274 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=78.9 pTM=0.497 ipTM=0.366 tol=0.689
2024-07-27 00:22:56,347 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=78.8 pTM=0.486 ipTM=0.339 tol=0.489
2024-07-27 00:22:56,348 alphafold2_multimer_v3_model_3_seed_000 took 374.0s (30 recycles)
2024-07-27 00:23:08,828 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=76.2 pTM=0.54 ipTM=0.544
2024-07-27 00:23:20,882 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=77.2 pTM=0.491 ipTM=0.353 tol=4.38
2024-07-27 00:23:32,962 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=78.1 pTM=0.46 ipTM=0.337 tol=4.22
2024-07-27 00:23:45,027 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=79.9 pTM=0.554 ipTM=0.586 tol=2.22
2024-07-27 00:23:57,082 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=80 pTM=0.566 ipTM=0.611 tol=1.17
2024-07-27 00:24:09,141 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=80.1 pTM=0.573 ipTM=0.626 tol=0.963
2024-07-27 00:24:21,188 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=80.4 pTM=0.587 ipTM=0.665 tol=2.47
2024-07-27 00:24:33,254 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=80.4 pTM=0.591 ipTM=0.68 tol=0.599
2024-07-27 00:24:45,334 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=80.4 pTM=0.594 ipTM=0.692 tol=0.241
2024-07-27 00:24:45,334 alphafold2_multimer_v3_model_4_seed_000 took 108.6s (8 recycles)
2024-07-27 00:24:57,823 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=77.6 pTM=0.433 ipTM=0.187
2024-07-27 00:25:09,915 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=77.8 pTM=0.433 ipTM=0.196 tol=4.54
2024-07-27 00:25:22,001 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=77.7 pTM=0.441 ipTM=0.206 tol=4.3
2024-07-27 00:25:34,075 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=78.2 pTM=0.444 ipTM=0.208 tol=1.17
2024-07-27 00:25:46,146 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=78.1 pTM=0.44 ipTM=0.197 tol=0.871
2024-07-27 00:25:58,229 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=78.1 pTM=0.439 ipTM=0.199 tol=0.718
2024-07-27 00:26:10,320 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=78.2 pTM=0.441 ipTM=0.204 tol=1.04
2024-07-27 00:26:22,405 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=78.4 pTM=0.444 ipTM=0.204 tol=0.419
2024-07-27 00:26:22,405 alphafold2_multimer_v3_model_5_seed_000 took 96.7s (7 recycles)
2024-07-27 00:26:22,783 reranking models by 'multimer' metric
2024-07-27 00:26:23,665 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-27 00:26:58,983 Relaxation took 36.2s
2024-07-27 00:26:58,983 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=80.4 pTM=0.594 ipTM=0.692
2024-07-27 00:27:37,497 Relaxation took 38.5s
2024-07-27 00:27:37,497 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=80.8 pTM=0.516 ipTM=0.448
2024-07-27 00:28:04,874 Relaxation took 27.4s
2024-07-27 00:28:04,874 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=78.8 pTM=0.486 ipTM=0.339
2024-07-27 00:28:26,708 Relaxation took 21.8s
2024-07-27 00:28:26,708 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=78.9 pTM=0.457 ipTM=0.291
2024-07-27 00:29:20,400 Relaxation took 53.7s
2024-07-27 00:29:20,401 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=78.4 pTM=0.444 ipTM=0.204
2024-07-27 00:29:21,769 Done