2024-07-27 01:31:18,352 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-27 01:31:18,673 Running on GPU 2024-07-27 01:31:22,031 Found 6 citations for tools or databases 2024-07-27 01:31:22,031 Query 1/1: MYC_RBBP7 (length 879) 2024-07-27 01:31:26,784 Setting max_seq=508, max_extra_seq=2048 2024-07-27 01:34:46,218 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=53.7 pTM=0.531 ipTM=0.276 2024-07-27 01:35:03,480 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=55.4 pTM=0.528 ipTM=0.255 tol=5.99 2024-07-27 01:35:20,787 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=55.2 pTM=0.537 ipTM=0.243 tol=4.03 2024-07-27 01:35:38,141 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=55.8 pTM=0.532 ipTM=0.215 tol=3.89 2024-07-27 01:35:55,538 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=55.6 pTM=0.529 ipTM=0.234 tol=9.87 2024-07-27 01:36:12,957 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=55.8 pTM=0.521 ipTM=0.229 tol=6.19 2024-07-27 01:36:30,397 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=55.7 pTM=0.53 ipTM=0.239 tol=7.79 2024-07-27 01:36:47,841 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=55.4 pTM=0.52 ipTM=0.247 tol=8.16 2024-07-27 01:37:05,297 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=55.2 pTM=0.527 ipTM=0.23 tol=6.63 2024-07-27 01:37:22,749 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=55.5 pTM=0.523 ipTM=0.241 tol=3.73 2024-07-27 01:37:40,200 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=55.6 pTM=0.529 ipTM=0.318 tol=3.9 2024-07-27 01:37:57,661 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=55.5 pTM=0.525 ipTM=0.257 tol=4.54 2024-07-27 01:38:15,121 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=55.4 pTM=0.526 ipTM=0.238 tol=4.01 2024-07-27 01:38:32,598 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=55.4 pTM=0.519 ipTM=0.199 tol=3.24 2024-07-27 01:38:50,085 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=55.5 pTM=0.528 ipTM=0.264 tol=3.12 2024-07-27 01:39:07,568 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=55.3 pTM=0.522 ipTM=0.192 tol=3.63 2024-07-27 01:39:25,063 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=55.5 pTM=0.523 ipTM=0.219 tol=2.87 2024-07-27 01:39:42,564 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=55.4 pTM=0.522 ipTM=0.234 tol=2.66 2024-07-27 01:40:00,058 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=55.4 pTM=0.529 ipTM=0.256 tol=2.93 2024-07-27 01:40:17,544 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=55.5 pTM=0.518 ipTM=0.198 tol=3.42 2024-07-27 01:40:35,021 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=55.6 pTM=0.522 ipTM=0.23 tol=3.58 2024-07-27 01:40:52,499 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=55.5 pTM=0.521 ipTM=0.198 tol=2.61 2024-07-27 01:41:09,981 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=55.4 pTM=0.527 ipTM=0.233 tol=3.55 2024-07-27 01:41:27,466 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=55.5 pTM=0.521 ipTM=0.202 tol=5.29 2024-07-27 01:41:44,938 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=55.7 pTM=0.535 ipTM=0.455 tol=3.47 2024-07-27 01:42:02,407 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=55.5 pTM=0.523 ipTM=0.202 tol=2.71 2024-07-27 01:42:19,900 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=55.6 pTM=0.525 ipTM=0.245 tol=2.88 2024-07-27 01:42:37,381 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=55.7 pTM=0.521 ipTM=0.216 tol=3.86 2024-07-27 01:42:54,853 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=55.5 pTM=0.527 ipTM=0.237 tol=2.88 2024-07-27 01:43:12,340 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=55.6 pTM=0.521 ipTM=0.241 tol=2.48 2024-07-27 01:43:29,840 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=55.5 pTM=0.532 ipTM=0.274 tol=4.7 2024-07-27 01:43:29,840 alphafold2_multimer_v3_model_1_seed_000 took 718.3s (30 recycles) 2024-07-27 01:43:47,826 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=54.1 pTM=0.522 ipTM=0.368 2024-07-27 01:44:05,398 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=55 pTM=0.506 ipTM=0.207 tol=14.7 2024-07-27 01:44:22,968 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=55.2 pTM=0.504 ipTM=0.204 tol=7.53 2024-07-27 01:44:40,556 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=55.4 pTM=0.505 ipTM=0.207 tol=7.73 2024-07-27 01:44:58,140 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=55.5 pTM=0.504 ipTM=0.201 tol=8.72 2024-07-27 01:45:15,723 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=55.5 pTM=0.504 ipTM=0.2 tol=10.6 2024-07-27 01:45:33,300 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=55.7 pTM=0.506 ipTM=0.2 tol=6.22 2024-07-27 01:45:50,872 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=55.6 pTM=0.506 ipTM=0.2 tol=4.38 2024-07-27 01:46:08,441 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=55.5 pTM=0.505 ipTM=0.201 tol=6.04 2024-07-27 01:46:25,995 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=55.5 pTM=0.505 ipTM=0.204 tol=7.28 2024-07-27 01:46:43,549 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=55.5 pTM=0.504 ipTM=0.201 tol=4.03 2024-07-27 01:47:01,100 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=55.5 pTM=0.506 ipTM=0.212 tol=9.52 2024-07-27 01:47:18,646 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=55.4 pTM=0.504 ipTM=0.199 tol=7.65 2024-07-27 01:47:36,184 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=55.6 pTM=0.506 ipTM=0.207 tol=6.93 2024-07-27 01:47:53,726 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=55.6 pTM=0.506 ipTM=0.198 tol=5.67 2024-07-27 01:48:11,241 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=55.5 pTM=0.505 ipTM=0.203 tol=3.66 2024-07-27 01:48:28,785 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=55.6 pTM=0.504 ipTM=0.2 tol=6.06 2024-07-27 01:48:46,343 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=55.6 pTM=0.506 ipTM=0.202 tol=7.42 2024-07-27 01:49:03,909 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=55.4 pTM=0.505 ipTM=0.202 tol=3.39 2024-07-27 01:49:21,471 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=55.3 pTM=0.505 ipTM=0.204 tol=4.03 2024-07-27 01:49:39,050 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=55.4 pTM=0.504 ipTM=0.199 tol=4.33 2024-07-27 01:49:56,631 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=55.5 pTM=0.504 ipTM=0.204 tol=7.36 2024-07-27 01:50:14,203 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=55.6 pTM=0.504 ipTM=0.199 tol=7.07 2024-07-27 01:50:31,781 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=55.7 pTM=0.504 ipTM=0.2 tol=5.91 2024-07-27 01:50:49,363 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=55.7 pTM=0.505 ipTM=0.202 tol=5.21 2024-07-27 01:51:06,947 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=55.6 pTM=0.503 ipTM=0.201 tol=6.16 2024-07-27 01:51:24,527 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=55.6 pTM=0.504 ipTM=0.204 tol=5.82 2024-07-27 01:51:42,099 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=55.6 pTM=0.504 ipTM=0.201 tol=5 2024-07-27 01:51:59,667 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=55.6 pTM=0.504 ipTM=0.201 tol=3.42 2024-07-27 01:52:17,246 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=55.4 pTM=0.505 ipTM=0.199 tol=4.91 2024-07-27 01:52:34,848 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=55.5 pTM=0.505 ipTM=0.204 tol=7.1 2024-07-27 01:52:34,849 alphafold2_multimer_v3_model_2_seed_000 took 544.5s (30 recycles) 2024-07-27 01:52:52,912 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=54.7 pTM=0.524 ipTM=0.269 2024-07-27 01:53:10,543 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=55.5 pTM=0.524 ipTM=0.282 tol=10.7 2024-07-27 01:53:28,161 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=55.3 pTM=0.521 ipTM=0.281 tol=6.27 2024-07-27 01:53:45,781 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=55.7 pTM=0.519 ipTM=0.389 tol=6.95 2024-07-27 01:54:03,399 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=55.1 pTM=0.515 ipTM=0.214 tol=5.38 2024-07-27 01:54:21,033 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=55.5 pTM=0.514 ipTM=0.238 tol=6.38 2024-07-27 01:54:38,675 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=55.3 pTM=0.52 ipTM=0.243 tol=6.26 2024-07-27 01:54:56,283 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=55.9 pTM=0.523 ipTM=0.443 tol=5.75 2024-07-27 01:55:13,909 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=55 pTM=0.518 ipTM=0.245 tol=5.58 2024-07-27 01:55:31,535 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=55.2 pTM=0.509 ipTM=0.202 tol=7.58 2024-07-27 01:55:49,145 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=55 pTM=0.52 ipTM=0.231 tol=6.22 2024-07-27 01:56:06,765 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=55.7 pTM=0.515 ipTM=0.307 tol=7.8 2024-07-27 01:56:24,386 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=55.2 pTM=0.521 ipTM=0.341 tol=8.16 2024-07-27 01:56:41,990 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=55.5 pTM=0.517 ipTM=0.249 tol=6.2 2024-07-27 01:56:59,606 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=55.4 pTM=0.521 ipTM=0.367 tol=5.14 2024-07-27 01:57:17,213 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=55.8 pTM=0.517 ipTM=0.277 tol=3.97 2024-07-27 01:57:34,814 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=55.6 pTM=0.514 ipTM=0.218 tol=4.23 2024-07-27 01:57:52,439 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=55.2 pTM=0.513 ipTM=0.222 tol=6.7 2024-07-27 01:58:10,076 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=55 pTM=0.516 ipTM=0.25 tol=8.84 2024-07-27 01:58:27,689 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=55.7 pTM=0.518 ipTM=0.34 tol=6.5 2024-07-27 01:58:45,295 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=55.5 pTM=0.516 ipTM=0.285 tol=5.36 2024-07-27 01:59:02,893 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=55.3 pTM=0.517 ipTM=0.258 tol=6.53 2024-07-27 01:59:20,509 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=55.2 pTM=0.513 ipTM=0.228 tol=6.26 2024-07-27 01:59:38,098 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=55.4 pTM=0.515 ipTM=0.277 tol=4.28 2024-07-27 01:59:55,682 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=55.3 pTM=0.519 ipTM=0.261 tol=3.61 2024-07-27 02:00:13,270 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=55.2 pTM=0.518 ipTM=0.294 tol=3.55 2024-07-27 02:00:30,878 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=55.3 pTM=0.513 ipTM=0.261 tol=3.45 2024-07-27 02:00:48,465 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=55.2 pTM=0.519 ipTM=0.251 tol=5.05 2024-07-27 02:01:06,060 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=55.2 pTM=0.512 ipTM=0.214 tol=4.18 2024-07-27 02:01:23,647 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=55.3 pTM=0.515 ipTM=0.24 tol=5.03 2024-07-27 02:01:41,262 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=55.1 pTM=0.513 ipTM=0.229 tol=6.06 2024-07-27 02:01:41,262 alphafold2_multimer_v3_model_3_seed_000 took 545.9s (30 recycles) 2024-07-27 02:01:59,295 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=55.2 pTM=0.54 ipTM=0.458 2024-07-27 02:02:16,916 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=54.2 pTM=0.51 ipTM=0.229 tol=18.7 2024-07-27 02:02:34,559 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=54.4 pTM=0.505 ipTM=0.209 tol=11.1 2024-07-27 02:02:52,220 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=54.3 pTM=0.512 ipTM=0.256 tol=15.6 2024-07-27 02:03:09,840 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=55.2 pTM=0.514 ipTM=0.274 tol=11 2024-07-27 02:03:27,464 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=54.5 pTM=0.51 ipTM=0.241 tol=12.1 2024-07-27 02:03:45,077 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=55.2 pTM=0.51 ipTM=0.234 tol=11.4 2024-07-27 02:04:02,720 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=54.7 pTM=0.505 ipTM=0.216 tol=10.5 2024-07-27 02:04:20,351 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=55 pTM=0.507 ipTM=0.23 tol=8.86 2024-07-27 02:04:37,975 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=54.5 pTM=0.507 ipTM=0.223 tol=8.59 2024-07-27 02:04:55,595 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=54.8 pTM=0.505 ipTM=0.217 tol=6.6 2024-07-27 02:05:13,222 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=54.4 pTM=0.511 ipTM=0.227 tol=7.47 2024-07-27 02:05:30,838 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=54.8 pTM=0.51 ipTM=0.197 tol=6.59 2024-07-27 02:05:48,452 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=54.5 pTM=0.515 ipTM=0.243 tol=4.56 2024-07-27 02:06:06,079 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=54.8 pTM=0.509 ipTM=0.223 tol=5.84 2024-07-27 02:06:23,680 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=54.3 pTM=0.518 ipTM=0.306 tol=8.53 2024-07-27 02:06:41,282 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=55.2 pTM=0.511 ipTM=0.378 tol=10.2 2024-07-27 02:06:58,897 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=54.4 pTM=0.51 ipTM=0.354 tol=8.9 2024-07-27 02:07:16,484 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=54.7 pTM=0.509 ipTM=0.376 tol=6.97 2024-07-27 02:07:34,077 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=54.5 pTM=0.516 ipTM=0.42 tol=6.38 2024-07-27 02:07:51,687 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=55.1 pTM=0.511 ipTM=0.364 tol=9.05 2024-07-27 02:08:09,303 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=54.8 pTM=0.508 ipTM=0.391 tol=7.67 2024-07-27 02:08:26,895 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=54.9 pTM=0.51 ipTM=0.343 tol=6.56 2024-07-27 02:08:44,531 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=54.8 pTM=0.508 ipTM=0.315 tol=8.91 2024-07-27 02:09:02,120 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=54.9 pTM=0.514 ipTM=0.386 tol=8.94 2024-07-27 02:09:19,735 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=54.5 pTM=0.511 ipTM=0.427 tol=8.05 2024-07-27 02:09:37,344 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=55 pTM=0.509 ipTM=0.26 tol=9.84 2024-07-27 02:09:54,964 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=54.5 pTM=0.508 ipTM=0.204 tol=12 2024-07-27 02:10:12,579 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=55 pTM=0.51 ipTM=0.233 tol=8.61 2024-07-27 02:10:30,195 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=54.8 pTM=0.507 ipTM=0.203 tol=8.84 2024-07-27 02:10:47,795 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=54.9 pTM=0.512 ipTM=0.257 tol=8.81 2024-07-27 02:10:47,796 alphafold2_multimer_v3_model_4_seed_000 took 546.0s (30 recycles) 2024-07-27 02:11:05,812 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=54.9 pTM=0.521 ipTM=0.268 2024-07-27 02:11:23,412 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=55.6 pTM=0.525 ipTM=0.479 tol=7.96 2024-07-27 02:11:41,017 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=56.3 pTM=0.513 ipTM=0.39 tol=6.11 2024-07-27 02:11:58,616 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=56.4 pTM=0.518 ipTM=0.414 tol=5.03 2024-07-27 02:12:16,216 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=56.1 pTM=0.519 ipTM=0.386 tol=13 2024-07-27 02:12:33,826 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=55.9 pTM=0.513 ipTM=0.429 tol=8.38 2024-07-27 02:12:51,460 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=56.2 pTM=0.512 ipTM=0.373 tol=8.27 2024-07-27 02:13:09,096 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=56.2 pTM=0.512 ipTM=0.454 tol=9.37 2024-07-27 02:13:26,739 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=56.1 pTM=0.512 ipTM=0.401 tol=7.49 2024-07-27 02:13:44,354 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=55.9 pTM=0.517 ipTM=0.455 tol=7.12 2024-07-27 02:14:01,991 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=55.8 pTM=0.511 ipTM=0.338 tol=5.15 2024-07-27 02:14:19,629 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=56.2 pTM=0.511 ipTM=0.528 tol=5.43 2024-07-27 02:14:37,270 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=55.9 pTM=0.515 ipTM=0.414 tol=6.46 2024-07-27 02:14:54,888 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=56.5 pTM=0.521 ipTM=0.538 tol=4.75 2024-07-27 02:15:12,512 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=55.6 pTM=0.518 ipTM=0.329 tol=3.83 2024-07-27 02:15:30,134 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=56 pTM=0.509 ipTM=0.389 tol=6.74 2024-07-27 02:15:47,752 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=56 pTM=0.516 ipTM=0.451 tol=4.94 2024-07-27 02:16:05,370 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=55.9 pTM=0.51 ipTM=0.392 tol=4.15 2024-07-27 02:16:22,987 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=56.1 pTM=0.524 ipTM=0.512 tol=6.7 2024-07-27 02:16:40,609 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=55.8 pTM=0.51 ipTM=0.308 tol=7.88 2024-07-27 02:16:58,232 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=55.9 pTM=0.509 ipTM=0.246 tol=10.8 2024-07-27 02:17:15,858 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=56.3 pTM=0.513 ipTM=0.507 tol=9.7 2024-07-27 02:17:33,491 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=55.7 pTM=0.513 ipTM=0.402 tol=10.8 2024-07-27 02:17:51,101 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=56.1 pTM=0.518 ipTM=0.494 tol=9.69 2024-07-27 02:18:08,727 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=55.6 pTM=0.519 ipTM=0.333 tol=10.5 2024-07-27 02:18:26,344 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=56 pTM=0.507 ipTM=0.388 tol=7.86 2024-07-27 02:18:43,965 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=55.9 pTM=0.515 ipTM=0.42 tol=4.8 2024-07-27 02:19:01,574 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=55.9 pTM=0.51 ipTM=0.331 tol=5.3 2024-07-27 02:19:19,202 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=55.9 pTM=0.511 ipTM=0.446 tol=4.21 2024-07-27 02:19:36,831 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=55.8 pTM=0.516 ipTM=0.333 tol=4.53 2024-07-27 02:19:54,445 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=55.8 pTM=0.514 ipTM=0.382 tol=5.23 2024-07-27 02:19:54,446 alphafold2_multimer_v3_model_5_seed_000 took 546.2s (30 recycles) 2024-07-27 02:19:54,928 reranking models by 'multimer' metric 2024-07-27 02:19:55,980 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-27 02:21:25,008 Relaxation took 90.1s 2024-07-27 02:21:25,008 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=55.8 pTM=0.514 ipTM=0.382 2024-07-27 02:22:41,242 Relaxation took 76.2s 2024-07-27 02:22:41,243 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=55.5 pTM=0.532 ipTM=0.274 2024-07-27 02:24:01,737 Relaxation took 80.5s 2024-07-27 02:24:01,737 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=54.9 pTM=0.512 ipTM=0.257 2024-07-27 02:25:21,138 Relaxation took 79.4s 2024-07-27 02:25:21,138 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=55.1 pTM=0.513 ipTM=0.229 2024-07-27 02:26:49,773 Relaxation took 88.6s 2024-07-27 02:26:49,773 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=55.5 pTM=0.505 ipTM=0.204 2024-07-27 02:26:51,315 Done