2024-07-27 02:27:26,503 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-27 02:27:26,816 Running on GPU 2024-07-27 02:27:30,631 Found 6 citations for tools or databases 2024-07-27 02:27:30,631 Query 1/1: NCOA4_FBXO16 (length 906) 2024-07-27 02:27:31,073 Sleeping for 6s. Reason: PENDING 2024-07-27 02:27:37,490 Sleeping for 5s. Reason: RUNNING 2024-07-27 02:27:42,910 Sleeping for 10s. Reason: RUNNING 2024-07-27 02:27:53,349 Sleeping for 9s. Reason: RUNNING 2024-07-27 02:28:02,764 Sleeping for 6s. Reason: RUNNING 2024-07-27 02:28:09,210 Sleeping for 8s. Reason: RUNNING 2024-07-27 02:28:17,646 Sleeping for 10s. Reason: RUNNING 2024-07-27 02:28:28,066 Sleeping for 9s. Reason: RUNNING 2024-07-27 02:28:37,486 Sleeping for 5s. Reason: RUNNING 2024-07-27 02:28:44,413 Sleeping for 10s. Reason: PENDING 2024-07-27 02:28:54,855 Sleeping for 7s. Reason: RUNNING 2024-07-27 02:29:02,321 Sleeping for 8s. Reason: RUNNING 2024-07-27 02:29:10,751 Sleeping for 10s. Reason: RUNNING 2024-07-27 02:29:23,137 Setting max_seq=508, max_extra_seq=2048 2024-07-27 02:32:32,394 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=40.6 pTM=0.291 ipTM=0.269 2024-07-27 02:32:49,877 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=42.4 pTM=0.264 ipTM=0.201 tol=15.9 2024-07-27 02:33:07,453 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=42.6 pTM=0.267 ipTM=0.221 tol=10.5 2024-07-27 02:33:25,080 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=43.2 pTM=0.256 ipTM=0.19 tol=9.76 2024-07-27 02:33:42,732 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=43.9 pTM=0.271 ipTM=0.232 tol=10.1 2024-07-27 02:34:00,347 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=43.7 pTM=0.254 ipTM=0.188 tol=7.06 2024-07-27 02:34:17,954 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=44 pTM=0.264 ipTM=0.21 tol=4.91 2024-07-27 02:34:35,566 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=44 pTM=0.255 ipTM=0.182 tol=6.7 2024-07-27 02:34:53,236 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=44 pTM=0.26 ipTM=0.207 tol=7.35 2024-07-27 02:35:10,921 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=43.8 pTM=0.254 ipTM=0.182 tol=10 2024-07-27 02:35:28,635 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=44.1 pTM=0.257 ipTM=0.19 tol=5.66 2024-07-27 02:35:46,347 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=43.9 pTM=0.255 ipTM=0.184 tol=5.96 2024-07-27 02:36:04,039 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=44.1 pTM=0.264 ipTM=0.213 tol=9.35 2024-07-27 02:36:21,735 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=44.9 pTM=0.276 ipTM=0.244 tol=6.52 2024-07-27 02:36:39,439 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=44.7 pTM=0.281 ipTM=0.26 tol=6.66 2024-07-27 02:36:57,143 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=45.1 pTM=0.283 ipTM=0.266 tol=5.62 2024-07-27 02:37:14,874 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=45.2 pTM=0.282 ipTM=0.265 tol=3.24 2024-07-27 02:37:32,589 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=45.2 pTM=0.285 ipTM=0.274 tol=3.18 2024-07-27 02:37:50,294 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=45.3 pTM=0.286 ipTM=0.276 tol=3.34 2024-07-27 02:38:08,001 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=45.3 pTM=0.288 ipTM=0.28 tol=4.54 2024-07-27 02:38:25,706 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=45.3 pTM=0.288 ipTM=0.282 tol=6.58 2024-07-27 02:38:43,398 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=45.5 pTM=0.287 ipTM=0.276 tol=3.53 2024-07-27 02:39:01,114 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=45.3 pTM=0.287 ipTM=0.276 tol=4.24 2024-07-27 02:39:18,847 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=45.6 pTM=0.29 ipTM=0.285 tol=3.82 2024-07-27 02:39:36,563 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=45.8 pTM=0.29 ipTM=0.287 tol=6.49 2024-07-27 02:39:54,262 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=45.6 pTM=0.29 ipTM=0.284 tol=6.23 2024-07-27 02:40:11,985 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=45.9 pTM=0.292 ipTM=0.29 tol=6.95 2024-07-27 02:40:29,729 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=45.9 pTM=0.291 ipTM=0.289 tol=3.04 2024-07-27 02:40:47,452 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=45.7 pTM=0.291 ipTM=0.288 tol=2.87 2024-07-27 02:41:05,186 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=45.4 pTM=0.29 ipTM=0.287 tol=7.43 2024-07-27 02:41:22,900 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=45.6 pTM=0.291 ipTM=0.288 tol=7.32 2024-07-27 02:41:22,901 alphafold2_multimer_v3_model_1_seed_000 took 714.6s (30 recycles) 2024-07-27 02:41:41,111 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=41.2 pTM=0.25 ipTM=0.146 2024-07-27 02:41:58,843 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=42 pTM=0.246 ipTM=0.151 tol=15.4 2024-07-27 02:42:16,583 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=41.4 pTM=0.242 ipTM=0.168 tol=18.9 2024-07-27 02:42:34,303 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=42.2 pTM=0.243 ipTM=0.146 tol=15.4 2024-07-27 02:42:51,995 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=42.2 pTM=0.246 ipTM=0.161 tol=8.67 2024-07-27 02:43:09,657 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=42.8 pTM=0.244 ipTM=0.177 tol=8.94 2024-07-27 02:43:27,374 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=43.1 pTM=0.239 ipTM=0.182 tol=10.8 2024-07-27 02:43:45,090 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=42.9 pTM=0.239 ipTM=0.172 tol=12.6 2024-07-27 02:44:02,874 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=42.7 pTM=0.238 ipTM=0.183 tol=20.5 2024-07-27 02:44:20,605 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=42.7 pTM=0.256 ipTM=0.183 tol=13.8 2024-07-27 02:44:38,300 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=42.9 pTM=0.258 ipTM=0.178 tol=9.65 2024-07-27 02:44:56,016 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=43.3 pTM=0.268 ipTM=0.208 tol=7.94 2024-07-27 02:45:13,696 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=43.6 pTM=0.277 ipTM=0.234 tol=10.7 2024-07-27 02:45:31,363 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=43.8 pTM=0.28 ipTM=0.242 tol=6.64 2024-07-27 02:45:49,006 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=43.9 pTM=0.282 ipTM=0.247 tol=6.89 2024-07-27 02:46:06,660 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=43.9 pTM=0.285 ipTM=0.256 tol=5.81 2024-07-27 02:46:24,325 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=43.9 pTM=0.284 ipTM=0.252 tol=5.8 2024-07-27 02:46:41,997 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=43.9 pTM=0.289 ipTM=0.266 tol=4.59 2024-07-27 02:46:59,646 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=44.1 pTM=0.288 ipTM=0.262 tol=3.45 2024-07-27 02:47:17,306 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=44 pTM=0.289 ipTM=0.265 tol=4.2 2024-07-27 02:47:34,974 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=44 pTM=0.288 ipTM=0.263 tol=3.5 2024-07-27 02:47:52,640 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=44.1 pTM=0.286 ipTM=0.258 tol=2.91 2024-07-27 02:48:10,299 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=44.1 pTM=0.286 ipTM=0.258 tol=2.57 2024-07-27 02:48:27,967 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=44.1 pTM=0.288 ipTM=0.263 tol=2.2 2024-07-27 02:48:45,644 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=44 pTM=0.289 ipTM=0.264 tol=5.33 2024-07-27 02:49:03,278 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=44.2 pTM=0.287 ipTM=0.258 tol=5.83 2024-07-27 02:49:20,917 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=43.9 pTM=0.285 ipTM=0.254 tol=5.13 2024-07-27 02:49:38,541 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=44.2 pTM=0.287 ipTM=0.263 tol=5.11 2024-07-27 02:49:56,168 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=43.9 pTM=0.286 ipTM=0.256 tol=5.32 2024-07-27 02:50:13,800 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=43.9 pTM=0.286 ipTM=0.256 tol=6.58 2024-07-27 02:50:31,480 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=44.1 pTM=0.287 ipTM=0.261 tol=5.7 2024-07-27 02:50:31,481 alphafold2_multimer_v3_model_2_seed_000 took 548.1s (30 recycles) 2024-07-27 02:50:49,735 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=36.8 pTM=0.238 ipTM=0.167 2024-07-27 02:51:07,591 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=39.1 pTM=0.235 ipTM=0.122 tol=29.7 2024-07-27 02:51:25,371 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=39.6 pTM=0.238 ipTM=0.128 tol=16.5 2024-07-27 02:51:43,153 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=40 pTM=0.238 ipTM=0.122 tol=11.1 2024-07-27 02:52:00,865 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=40 pTM=0.241 ipTM=0.13 tol=14.2 2024-07-27 02:52:18,573 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=40.7 pTM=0.242 ipTM=0.131 tol=9.84 2024-07-27 02:52:36,373 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=41.1 pTM=0.24 ipTM=0.13 tol=17.9 2024-07-27 02:52:54,154 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=41.3 pTM=0.248 ipTM=0.148 tol=10.1 2024-07-27 02:53:11,949 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=41.2 pTM=0.242 ipTM=0.139 tol=9.16 2024-07-27 02:53:29,731 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=41.2 pTM=0.244 ipTM=0.138 tol=9.8 2024-07-27 02:53:47,480 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=41.3 pTM=0.248 ipTM=0.149 tol=6.6 2024-07-27 02:54:05,265 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=41.8 pTM=0.254 ipTM=0.165 tol=5.95 2024-07-27 02:54:23,060 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=42.3 pTM=0.27 ipTM=0.212 tol=6.61 2024-07-27 02:54:40,835 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=43.2 pTM=0.286 ipTM=0.257 tol=4.16 2024-07-27 02:54:58,587 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=42.8 pTM=0.279 ipTM=0.236 tol=3.39 2024-07-27 02:55:16,349 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=43.1 pTM=0.283 ipTM=0.247 tol=4.02 2024-07-27 02:55:34,118 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=42.7 pTM=0.281 ipTM=0.243 tol=5.48 2024-07-27 02:55:51,874 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=43.1 pTM=0.287 ipTM=0.262 tol=2.75 2024-07-27 02:56:09,618 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=43.3 pTM=0.286 ipTM=0.256 tol=2.63 2024-07-27 02:56:27,375 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=43.9 pTM=0.295 ipTM=0.281 tol=2.81 2024-07-27 02:56:45,130 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=43.3 pTM=0.286 ipTM=0.258 tol=3.32 2024-07-27 02:57:02,889 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=42.8 pTM=0.289 ipTM=0.266 tol=3.26 2024-07-27 02:57:20,620 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=43 pTM=0.288 ipTM=0.261 tol=6.92 2024-07-27 02:57:38,420 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=43.2 pTM=0.29 ipTM=0.27 tol=5.81 2024-07-27 02:57:56,189 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=42.9 pTM=0.29 ipTM=0.269 tol=8.05 2024-07-27 02:58:13,977 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=42.8 pTM=0.286 ipTM=0.261 tol=7.64 2024-07-27 02:58:31,735 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=43.1 pTM=0.293 ipTM=0.279 tol=6.83 2024-07-27 02:58:49,444 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=43.1 pTM=0.298 ipTM=0.295 tol=8.12 2024-07-27 02:59:07,154 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=43 pTM=0.295 ipTM=0.286 tol=10.1 2024-07-27 02:59:24,907 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=43.3 pTM=0.295 ipTM=0.281 tol=8.99 2024-07-27 02:59:42,630 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=43.4 pTM=0.291 ipTM=0.27 tol=5.58 2024-07-27 02:59:42,631 alphafold2_multimer_v3_model_3_seed_000 took 550.6s (30 recycles) 2024-07-27 03:00:00,936 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=38 pTM=0.236 ipTM=0.182 2024-07-27 03:00:18,739 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=40.4 pTM=0.247 ipTM=0.296 tol=22.8 2024-07-27 03:00:36,508 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=40.7 pTM=0.26 ipTM=0.201 tol=15.5 2024-07-27 03:00:54,255 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=40.8 pTM=0.242 ipTM=0.158 tol=20.4 2024-07-27 03:01:11,992 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=41.8 pTM=0.255 ipTM=0.188 tol=11.7 2024-07-27 03:01:29,736 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=41.9 pTM=0.25 ipTM=0.174 tol=8.98 2024-07-27 03:01:47,474 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=42.3 pTM=0.258 ipTM=0.19 tol=6.65 2024-07-27 03:02:05,207 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=42 pTM=0.253 ipTM=0.18 tol=4.98 2024-07-27 03:02:22,957 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=41.9 pTM=0.247 ipTM=0.172 tol=4.62 2024-07-27 03:02:40,705 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=41.7 pTM=0.242 ipTM=0.157 tol=8.24 2024-07-27 03:02:58,538 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=42 pTM=0.245 ipTM=0.163 tol=10.3 2024-07-27 03:03:16,340 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=42.2 pTM=0.245 ipTM=0.168 tol=9.01 2024-07-27 03:03:34,159 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=42 pTM=0.26 ipTM=0.201 tol=9.24 2024-07-27 03:03:51,980 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=42 pTM=0.244 ipTM=0.161 tol=9.82 2024-07-27 03:04:09,817 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=42.1 pTM=0.244 ipTM=0.178 tol=8.52 2024-07-27 03:04:27,660 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=42.2 pTM=0.244 ipTM=0.155 tol=7.57 2024-07-27 03:04:45,486 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=42.2 pTM=0.254 ipTM=0.22 tol=9.41 2024-07-27 03:05:03,327 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=42.4 pTM=0.245 ipTM=0.234 tol=9.66 2024-07-27 03:05:21,126 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=42.4 pTM=0.254 ipTM=0.185 tol=8.61 2024-07-27 03:05:38,933 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=42.5 pTM=0.243 ipTM=0.174 tol=9 2024-07-27 03:05:56,743 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=42.5 pTM=0.253 ipTM=0.241 tol=8.28 2024-07-27 03:06:14,567 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=42.4 pTM=0.243 ipTM=0.176 tol=9.3 2024-07-27 03:06:32,423 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=42.5 pTM=0.25 ipTM=0.172 tol=7.37 2024-07-27 03:06:50,229 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=42.4 pTM=0.242 ipTM=0.209 tol=9.25 2024-07-27 03:07:08,055 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=42.5 pTM=0.244 ipTM=0.254 tol=5.82 2024-07-27 03:07:25,863 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=42.4 pTM=0.239 ipTM=0.173 tol=8.56 2024-07-27 03:07:43,673 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=42.5 pTM=0.244 ipTM=0.161 tol=9.73 2024-07-27 03:08:01,535 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=42.6 pTM=0.242 ipTM=0.162 tol=5.93 2024-07-27 03:08:19,352 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=42.4 pTM=0.249 ipTM=0.204 tol=6.04 2024-07-27 03:08:37,195 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=42.3 pTM=0.247 ipTM=0.169 tol=7.56 2024-07-27 03:08:55,016 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=42.5 pTM=0.243 ipTM=0.17 tol=7.05 2024-07-27 03:08:55,017 alphafold2_multimer_v3_model_4_seed_000 took 551.9s (30 recycles) 2024-07-27 03:09:13,296 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=36.9 pTM=0.24 ipTM=0.213 2024-07-27 03:09:31,095 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=39.7 pTM=0.237 ipTM=0.143 tol=13.2 2024-07-27 03:09:48,942 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=40.2 pTM=0.237 ipTM=0.188 tol=9.24 2024-07-27 03:10:06,766 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=40.2 pTM=0.233 ipTM=0.176 tol=9.98 2024-07-27 03:10:24,559 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=40.6 pTM=0.235 ipTM=0.15 tol=6.67 2024-07-27 03:10:42,352 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=40.8 pTM=0.235 ipTM=0.136 tol=5.27 2024-07-27 03:11:00,183 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=40.7 pTM=0.233 ipTM=0.135 tol=7.21 2024-07-27 03:11:18,004 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=40.5 pTM=0.238 ipTM=0.138 tol=9.37 2024-07-27 03:11:35,834 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=40.6 pTM=0.237 ipTM=0.137 tol=8.27 2024-07-27 03:11:53,638 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=40.7 pTM=0.237 ipTM=0.135 tol=9.85 2024-07-27 03:12:11,473 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=40.6 pTM=0.239 ipTM=0.136 tol=9.53 2024-07-27 03:12:29,323 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=40.5 pTM=0.241 ipTM=0.136 tol=22.7 2024-07-27 03:12:47,218 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=40.8 pTM=0.244 ipTM=0.14 tol=11.4 2024-07-27 03:13:05,060 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=41.4 pTM=0.243 ipTM=0.139 tol=10.6 2024-07-27 03:13:22,868 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=41.8 pTM=0.25 ipTM=0.16 tol=5.28 2024-07-27 03:13:40,630 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=42.8 pTM=0.276 ipTM=0.239 tol=5.12 2024-07-27 03:13:58,411 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=43.1 pTM=0.285 ipTM=0.268 tol=3.89 2024-07-27 03:14:16,199 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=43.4 pTM=0.293 ipTM=0.29 tol=3.96 2024-07-27 03:14:33,990 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=43.6 pTM=0.293 ipTM=0.291 tol=5.3 2024-07-27 03:14:51,790 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=43.8 pTM=0.296 ipTM=0.299 tol=4.21 2024-07-27 03:15:09,567 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=43.8 pTM=0.297 ipTM=0.299 tol=6.23 2024-07-27 03:15:27,327 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=43.7 pTM=0.295 ipTM=0.296 tol=6.52 2024-07-27 03:15:45,100 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=43.9 pTM=0.297 ipTM=0.3 tol=4.36 2024-07-27 03:16:02,906 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=43.8 pTM=0.298 ipTM=0.304 tol=4.22 2024-07-27 03:16:20,698 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=43.8 pTM=0.298 ipTM=0.306 tol=3.02 2024-07-27 03:16:38,480 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=43.9 pTM=0.296 ipTM=0.298 tol=3 2024-07-27 03:16:56,295 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=43.8 pTM=0.297 ipTM=0.301 tol=3.92 2024-07-27 03:17:14,086 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=43.9 pTM=0.298 ipTM=0.305 tol=5.32 2024-07-27 03:17:31,889 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=43.8 pTM=0.298 ipTM=0.303 tol=6.36 2024-07-27 03:17:49,683 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=43.8 pTM=0.302 ipTM=0.314 tol=4.77 2024-07-27 03:18:07,473 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=44 pTM=0.303 ipTM=0.312 tol=4.4 2024-07-27 03:18:07,474 alphafold2_multimer_v3_model_5_seed_000 took 551.9s (30 recycles) 2024-07-27 03:18:07,990 reranking models by 'multimer' metric 2024-07-27 03:18:09,088 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-27 03:19:10,879 Relaxation took 62.9s 2024-07-27 03:19:10,879 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=44 pTM=0.303 ipTM=0.312 2024-07-27 03:19:58,281 Relaxation took 47.4s 2024-07-27 03:19:58,281 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=45.6 pTM=0.291 ipTM=0.288 2024-07-27 03:21:09,306 Relaxation took 71.0s 2024-07-27 03:21:09,306 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=43.4 pTM=0.291 ipTM=0.27 2024-07-27 03:22:11,086 Relaxation took 61.8s 2024-07-27 03:22:11,086 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=44.1 pTM=0.287 ipTM=0.261 2024-07-27 03:23:39,672 Relaxation took 88.6s 2024-07-27 03:23:39,672 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=42.5 pTM=0.243 ipTM=0.17 2024-07-27 03:23:41,355 Done